RLG00000033994

Aluminum-activated malate transporter

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
35151187 .. 35153532
2346 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033994

Sequence Viewer

Length: 1059 bp
ATGAGAGAGTCAAGTGCGGCTGGTTTGGAAGAATGTCCGATGGGTTGGTCAACTTTTGCAACAACGTTCAGGAGGTTTCGGTTAAACTGTATCAAATGGGCCGCTCCGATACTCGGAAAGCTTACTTCGCCGATGGGCTTGTCGCTGGCGATTGTGTCACTGCTCATATTTTTCAAGGAGCCCCTCAAAGATGCTAGCCAATATTCCATCTGGGCGATTCTCACCGTTGTCGTCGTTTTCGAATTCAGCATAGGTGCGACGTTGAACAAAGCGTTTAATCGTGCTTTGGGGACAATTTCGGCTGGTGGGCTAGCTCTAGGTGTAGCAGAGTTGGCTGTAATGGCCGGAAGTTGGCAGGAGGTTGTGATTGTAGTCAATATTTTCATAGCAGGTTTTCTTGCTAGCTATATCAAGCTTTATCCGCCAATGAAGACTTATGAATACGGATTTCGGGTGTTCTTGTTGACATACTGTATAGTTTTGGTATCCGGGAGTACATCATCATTTTTCAGAACAGCAATTTATCGATTGATACTTATTGGAGTGGGTGCTGCTAAAAATTTCAAAGGTGTTGCTACTTCTTTGGAAGGTGTTGTTAATGGAATCTGCAATGTGTTGGGTACGAGAGAATTCCTTCGAAAATTCTCACATACCAAGCTTCCGATGAACCATTGTATAATGGATATAGAGCCACTATACAATCTTCAACCCAAGAGGAATCAAGAAGGCTGTGATTTCTTGAATCTTGATAATCTCTTTGTAGTCGTACCCCGTGATGACCAACTACCTCAAGTCGGGCCTGTGCAATTGGGCTGGAGATGCCCGAAGCTAAAGAAGGATGTACATCTGGTTGTATACCCCCAGTCCGCACCGACAGATCATGATCTTACATTGTTCACAATCTTGAAAGGCAATGGTCATGCTGGGATGCGCATTGGGTGGGTTCTTGTGAAAGATGCAGAAGTTGCAAAGAATATGATCAAATTCATAGAGCTCCACACCATTGGCGCCTCCAGGGATTTTCTCGGCGCCGAGCTACCAAGATCTTGGAAGTCATGA

Protein Analysis

353

Amino Acids

38.96

Weight (kDa)

9.26

Isoelectric Point (pI)

28.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALMT PF11744 45 - 185 2.1e-58 Aluminium activated malate transporter
FUSC_2 PF13515 67 - 185 6.8e-12 Fusaric acid resistance protein-like
Alliinase_C PF04864 289 - 340 7.6e-16 Allinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 932
Acc36I ACCTGC 1 cut(s) 380
AccB1I GGYRCC 2 cut(s) 1007, 1028
AccBSI CCGCTC 1 cut(s) 104
AccI GTMKAC 1 cut(s) 855
AciI CCGC 4 cut(s) 17, 102, 422, 867
AclI AACGTT 1 cut(s) 65
AcoI YGGCCR 1 cut(s) 342
AcsI RAATTY 5 cut(s) 242, 559, 629, 641, 983
AcyI GRCGYC 2 cut(s) 1008, 1029
AfaI GTAC 4 cut(s) 496, 622, 768, 843
AfiI CCNNNNNNNGG 3 cut(s) 113, 351, 794
AgsI TTSAA 6 cut(s) 175, 265, 565, 707, 742, 907
AjnI CCWGG 1 cut(s) 1013
AluBI AGCT 8 cut(s) 121, 314, 405, 415, 658, 829, 994, 1036
AluI AGCT 8 cut(s) 121, 314, 405, 415, 658, 829, 994, 1036
Alw21I GWGCWC 1 cut(s) 996
AoxI GGCC 3 cut(s) 99, 342, 797
ApeKI GCWGC 1 cut(s) 551
ApoI RAATTY 5 cut(s) 242, 559, 629, 641, 983
Asp700I GAANNNNTTC 1 cut(s) 633
AspLEI GCGC 3 cut(s) 933, 1010, 1031
AspS9I GGNCC 2 cut(s) 99, 797
AsuC2I CCSGG 1 cut(s) 490
AsuHPI GGTGA 1 cut(s) 214
AsuII TTCGAA 2 cut(s) 240, 637
AsuNHI GCTAGC 3 cut(s) 194, 310, 401
BanI GGYRCC 2 cut(s) 1007, 1028
BanII GRGCYC 2 cut(s) 183, 996
BbsI GAAGAC 1 cut(s) 437
Bbv12I GWGCWC 1 cut(s) 996
BbvI GCAGC 1 cut(s) 538
BccI CCATC 3 cut(s) 34, 127, 215
BciT130I CCWGG 1 cut(s) 1015
BciVI GTATCC 1 cut(s) 496
BclI TGATCA 1 cut(s) 978
BcnI CCSGG 1 cut(s) 490
BfaI CTAG 4 cut(s) 195, 311, 317, 402
BfoI RGCGCY 2 cut(s) 1011, 1032
BfuAI ACCTGC 1 cut(s) 380
BfuI GTATCC 1 cut(s) 496
BglII AGATCT 1 cut(s) 1043
BisI GCNGC 3 cut(s) 18, 102, 552
BlsI GCNGC 3 cut(s) 19, 103, 553
Bme1390I CCNGG 2 cut(s) 490, 1015
BmgT120I GGNCC 2 cut(s) 99, 797
BmiI GGNNCC 3 cut(s) 180, 1009, 1030
BmrFI CCNGG 2 cut(s) 490, 1015
BmrI ACTGGG 1 cut(s) 856
BmsI GCATC 4 cut(s) 181, 809, 918, 946
BmtI GCTAGC 3 cut(s) 198, 314, 405
BmuI ACTGGG 1 cut(s) 856
BpiI GAAGAC 1 cut(s) 437
BpmI CTGGAG 2 cut(s) 835, 997
Bpu14I TTCGAA 2 cut(s) 240, 637
BpuEI CTTGAG 1 cut(s) 774
BpuMI CCSGG 1 cut(s) 490
Bsa29I ATCGAT 1 cut(s) 526
BsaBI GATNNNNATC 2 cut(s) 843, 882
BsaHI GRCGYC 2 cut(s) 1008, 1029
BsaJI CCNNGG 1 cut(s) 1014
Bsc4I CCNNNNNNNGG 3 cut(s) 113, 351, 794
Bse1I ACTGG 1 cut(s) 862
Bse3DI GCAATG 2 cut(s) 616, 919
Bse8I GATNNNNATC 2 cut(s) 843, 882
BseBI CCWGG 1 cut(s) 1015
BseCI ATCGAT 1 cut(s) 526
BseDI CCNNGG 1 cut(s) 1014
BseGI GGATG 2 cut(s) 844, 933
BseJI GATNNNNATC 2 cut(s) 843, 882
BseLI CCNNNNNNNGG 3 cut(s) 113, 351, 794
BseMI GCAATG 2 cut(s) 616, 919
BseNI ACTGG 1 cut(s) 862
BseXI GCAGC 1 cut(s) 538
BseYI CCCAGC 1 cut(s) 923
BshFI GGCC 3 cut(s) 101, 344, 799
BshNI GGYRCC 2 cut(s) 1007, 1028
BshVI ATCGAT 1 cut(s) 526
BsiHKAI GWGCWC 1 cut(s) 996
BsiSI CCGG 2 cut(s) 345, 489
BslFI GGGAC 1 cut(s) 304
BslI CCNNNNNNNGG 3 cut(s) 113, 351, 794
BsmFI GGGAC 1 cut(s) 304
BsnI GGCC 3 cut(s) 101, 344, 799
Bsp119I TTCGAA 2 cut(s) 240, 637
Bsp1286I GDGCHC 2 cut(s) 183, 996
Bsp1407I TGTACA 1 cut(s) 841
Bsp143I GATC 4 cut(s) 877, 883, 978, 1043
BspACI CCGC 4 cut(s) 17, 102, 422, 867
BspANI GGCC 3 cut(s) 101, 344, 799
BspDI ATCGAT 1 cut(s) 526
BspHI TCATGA 2 cut(s) 880, 1055
BspLI GGNNCC 3 cut(s) 180, 1009, 1030
BspMI ACCTGC 1 cut(s) 380
BspOI GCTAGC 3 cut(s) 198, 314, 405
BspT104I TTCGAA 2 cut(s) 240, 637
BspT107I GGYRCC 2 cut(s) 1007, 1028
BsrBI CCGCTC 1 cut(s) 104
BsrDI GCAATG 2 cut(s) 616, 919
BsrGI TGTACA 1 cut(s) 841
BsrI ACTGG 1 cut(s) 862
BssECI CCNNGG 1 cut(s) 1014
BssMI GATC 4 cut(s) 877, 883, 978, 1043
BssNAI GTATAC 1 cut(s) 856
BssNI GRCGYC 2 cut(s) 1008, 1029
Bst1107I GTATAC 1 cut(s) 856
Bst2UI CCWGG 1 cut(s) 1015
Bst4CI ACNGT 3 cut(s) 89, 226, 473
BstACI GRCGYC 2 cut(s) 1008, 1029
BstAPI GCANNNNNTGC 1 cut(s) 965
BstAUI TGTACA 1 cut(s) 841
BstBI TTCGAA 2 cut(s) 240, 637
BstC8I GCNNGC 4 cut(s) 147, 196, 312, 403
BstF5I GGATG 2 cut(s) 844, 933
BstH2I RGCGCY 2 cut(s) 1011, 1032
BstHHI GCGC 3 cut(s) 933, 1010, 1031
BstKTI GATC 4 cut(s) 880, 886, 981, 1046
BstMBI GATC 4 cut(s) 877, 883, 978, 1043
BstMWI GCNNNNNNNGC 6 cut(s) 127, 332, 341, 421, 819, 965
BstNI CCWGG 1 cut(s) 1015
BstSCI CCNGG 2 cut(s) 488, 1013
BstV1I GCAGC 1 cut(s) 538
BstV2I GAAGAC 1 cut(s) 437
BstX2I RGATCY 1 cut(s) 1043
BstXI CCANNNNNNTGG 2 cut(s) 1004, 1047
BstYI RGATCY 1 cut(s) 1043
BstZ17I GTATAC 1 cut(s) 856
Bsu15I ATCGAT 1 cut(s) 526
BsuI GTATCC 1 cut(s) 496
BsuRI GGCC 3 cut(s) 101, 344, 799
BsuTUI ATCGAT 1 cut(s) 526
BtsCI GGATG 2 cut(s) 844, 933
BtsI GCAGTG 1 cut(s) 158
BtsIMutI CAGTG 1 cut(s) 158
BveI ACCTGC 1 cut(s) 380
Cac8I GCNNGC 4 cut(s) 147, 196, 312, 403
CciI TCATGA 2 cut(s) 880, 1055
CfoI GCGC 3 cut(s) 933, 1010, 1031
Cfr13I GGNCC 2 cut(s) 99, 797
ClaI ATCGAT 1 cut(s) 526
Csp6I GTAC 4 cut(s) 495, 621, 767, 842
CviAII CATG 3 cut(s) 881, 920, 1056
CviQI GTAC 4 cut(s) 495, 621, 767, 842
DinI GGCGCC 2 cut(s) 1009, 1030
DpnI GATC 4 cut(s) 879, 885, 980, 1045
DpnII GATC 4 cut(s) 877, 883, 978, 1043
EaeI YGGCCR 1 cut(s) 342
EciI GGCGGA 1 cut(s) 411
Ecl136II GAGCTC 1 cut(s) 994
Eco24I GRGCYC 2 cut(s) 183, 996
Eco53kI GAGCTC 1 cut(s) 994
EcoICRI GAGCTC 1 cut(s) 994
EcoRI GAATTC 2 cut(s) 242, 629
EcoRII CCWGG 1 cut(s) 1013
EcoT38I GRGCYC 2 cut(s) 183, 996
EgeI GGCGCC 2 cut(s) 1009, 1030
EheI GGCGCC 2 cut(s) 1009, 1030
FaeI CATG 3 cut(s) 884, 923, 1059
FaqI GGGAC 1 cut(s) 304
FatI CATG 3 cut(s) 880, 919, 1055
FbaI TGATCA 1 cut(s) 978
FblI GTMKAC 1 cut(s) 855
Fnu4HI GCNGC 3 cut(s) 18, 102, 552
FokI GGATG 2 cut(s) 851, 940
FriOI GRGCYC 2 cut(s) 183, 996
Fsp4HI GCNGC 3 cut(s) 18, 102, 552
FspAI RTGCGCAY 1 cut(s) 932
FspBI CTAG 4 cut(s) 195, 311, 317, 402
FspI TGCGCA 1 cut(s) 932
GlaI GCGC 3 cut(s) 932, 1009, 1030
GluI GCNGC 3 cut(s) 18, 102, 552
GsaI CCCAGC 1 cut(s) 927
GsuI CTGGAG 2 cut(s) 835, 997
HaeII RGCGCY 2 cut(s) 1011, 1032
HaeIII GGCC 3 cut(s) 101, 344, 799
HapII CCGG 2 cut(s) 345, 489
HhaI GCGC 3 cut(s) 933, 1010, 1031
Hin1I GRCGYC 2 cut(s) 1008, 1029
Hin1II CATG 3 cut(s) 884, 923, 1059
Hin6I GCGC 3 cut(s) 931, 1008, 1029
HinP1I GCGC 3 cut(s) 931, 1008, 1029
HincII GTYRAC 2 cut(s) 51, 465
HindII GTYRAC 2 cut(s) 51, 465
HindIII AAGCTT 3 cut(s) 119, 413, 656
HinfI GANTC 5 cut(s) 8, 217, 603, 718, 742
HpaII CCGG 2 cut(s) 345, 489
HphI GGTGA 1 cut(s) 214
Hpy166II GTNNAC 4 cut(s) 51, 465, 856, 897
Hpy188I TCNGA 5 cut(s) 39, 108, 116, 512, 663
Hpy188III TCNNGA 7 cut(s) 70, 722, 739, 746, 881, 904, 1056
Hpy8I GTNNAC 4 cut(s) 51, 465, 856, 897
Hpy99I CGWCG 2 cut(s) 236, 262
HpyAV CCTTC 4 cut(s) 581, 644, 719, 829
HpyCH4III ACNGT 3 cut(s) 89, 226, 473
HpyCH4IV ACGT 2 cut(s) 65, 260
HpyCH4V TGCA 5 cut(s) 59, 609, 805, 959, 968
HpyF10VI GCNNNNNNNGC 6 cut(s) 127, 332, 341, 421, 819, 965
HpySE526I ACGT 2 cut(s) 65, 260
Hsp92I GRCGYC 2 cut(s) 1008, 1029
Hsp92II CATG 3 cut(s) 884, 923, 1059
HspAI GCGC 3 cut(s) 931, 1008, 1029
KasI GGCGCC 2 cut(s) 1007, 1028
Ksp22I TGATCA 1 cut(s) 978
Kzo9I GATC 4 cut(s) 877, 883, 978, 1043
LmnI GCTCC 3 cut(s) 109, 178, 999
Lsp1109I GCAGC 1 cut(s) 538
LweI GCATC 4 cut(s) 181, 809, 918, 946
MaeI CTAG 4 cut(s) 195, 311, 317, 402
MaeII ACGT 2 cut(s) 65, 260
MaeIII GTNAC 1 cut(s) 156
MalI GATC 4 cut(s) 879, 885, 980, 1045
MbiI CCGCTC 1 cut(s) 104
MboI GATC 4 cut(s) 877, 883, 978, 1043
MboII GAAGA 3 cut(s) 41, 442, 695
MfeI CAATTG 1 cut(s) 806
MflI RGATCY 1 cut(s) 1043
MhlI GDGCHC 2 cut(s) 183, 996
MluCI AATT 8 cut(s) 242, 294, 519, 559, 629, 641, 806, 983
Mly113I GGCGCC 2 cut(s) 1008, 1029
MlyI GAGTC 1 cut(s) 17
MnlI CCTC 6 cut(s) 66, 194, 352, 708, 798, 1021
MroXI GAANNNNTTC 1 cut(s) 633
MseI TTAA 3 cut(s) 83, 276, 597
MspI CCGG 2 cut(s) 345, 489
MspR9I CCNGG 2 cut(s) 490, 1015
MunI CAATTG 1 cut(s) 806
MvaI CCWGG 1 cut(s) 1015
MwoI GCNNNNNNNGC 6 cut(s) 127, 332, 341, 421, 819, 965
NarI GGCGCC 2 cut(s) 1008, 1029
NciI CCSGG 1 cut(s) 490
NdeII GATC 4 cut(s) 877, 883, 978, 1043
NheI GCTAGC 3 cut(s) 194, 310, 401
NlaIII CATG 3 cut(s) 884, 923, 1059
NlaIV GGNNCC 3 cut(s) 180, 1009, 1030
NmeAIII GCCGAG 2 cut(s) 1005, 1057
NmuCI GTSAC 1 cut(s) 156
NsbI TGCGCA 1 cut(s) 932
NspV TTCGAA 2 cut(s) 240, 637
PagI TCATGA 2 cut(s) 880, 1055
PcsI WCGNNNNNNNCGW 1 cut(s) 237
PdmI GAANNNNTTC 1 cut(s) 633
PfeI GAWTC 4 cut(s) 217, 603, 718, 742
PfoI TCCNGGA 1 cut(s) 488
PkrI GCNGC 3 cut(s) 19, 103, 553
PleI GAGTC 1 cut(s) 16
PluTI GGCGCC 2 cut(s) 1011, 1032
PpsI GAGTC 1 cut(s) 16
Psp124BI GAGCTC 1 cut(s) 996
Psp1406I AACGTT 1 cut(s) 65
Psp6I CCWGG 1 cut(s) 1013
PspFI CCCAGC 1 cut(s) 923
PspGI CCWGG 1 cut(s) 1013
PspN4I GGNNCC 3 cut(s) 180, 1009, 1030
PspPI GGNCC 2 cut(s) 99, 797
PsuI RGATCY 1 cut(s) 1043
RsaI GTAC 4 cut(s) 496, 622, 768, 843
RsaNI GTAC 4 cut(s) 495, 621, 767, 842
SacI GAGCTC 1 cut(s) 996
SaqAI TTAA 3 cut(s) 83, 276, 597
SatI GCNGC 3 cut(s) 18, 102, 552
Sau3AI GATC 4 cut(s) 877, 883, 978, 1043
Sau96I GGNCC 2 cut(s) 99, 797
SchI GAGTC 1 cut(s) 17
ScrFI CCNGG 2 cut(s) 490, 1015
SduI GDGCHC 2 cut(s) 183, 996
SfaNI GCATC 4 cut(s) 181, 809, 918, 946
SfoI GGCGCC 2 cut(s) 1009, 1030
SfuI TTCGAA 2 cut(s) 240, 637
SmlI CTYRAG 1 cut(s) 789
SmoI CTYRAG 1 cut(s) 789
Sse9I AATT 8 cut(s) 242, 294, 519, 559, 629, 641, 806, 983
SsiI CCGC 4 cut(s) 17, 102, 422, 867
SspDI GGCGCC 2 cut(s) 1007, 1028
SspI AATATT 2 cut(s) 203, 379
SspMI CTAG 4 cut(s) 195, 311, 317, 402
SstI GAGCTC 1 cut(s) 996
StyD4I CCNGG 2 cut(s) 488, 1013
TaaI ACNGT 3 cut(s) 89, 226, 473
TaiI ACGT 2 cut(s) 68, 263
TaqI TCGA 3 cut(s) 240, 526, 637
TasI AATT 8 cut(s) 242, 294, 519, 559, 629, 641, 806, 983
TatI WGTACW 2 cut(s) 494, 841
TauI GCSGC 2 cut(s) 20, 104
TfiI GAWTC 4 cut(s) 217, 603, 718, 742
Tru1I TTAA 3 cut(s) 83, 276, 597
Tru9I TTAA 3 cut(s) 83, 276, 597
TscAI CASTG 1 cut(s) 165
TseFI GTSAC 1 cut(s) 156
TseI GCWGC 1 cut(s) 551
Tsp45I GTSAC 1 cut(s) 156
TspDTI ATGAA 5 cut(s) 373, 443, 453, 680, 976
TspGWI ACGGA 1 cut(s) 459
TspRI CASTG 1 cut(s) 165
XapI RAATTY 5 cut(s) 242, 559, 629, 641, 983
XmiI GTMKAC 1 cut(s) 855
XmnI GAANNNNTTC 1 cut(s) 633
XspI CTAG 4 cut(s) 195, 311, 317, 402
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.