Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0002534

Physical Location & Seq

Genomic Coordinates Reverse (-)

23323391 .. 23328655

Gene Structure 5265 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1228500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1668 bp

ATGGCTTCCACGATCTTTAGAAGCCTTCATACGAACCCTTGTTTGCTCCATACAACTGCACTACTTAGAAGAAAAGATGTCATTTTGTATTGCACAATGAGGAGCGCACAAACCCGGACAGCCGCTACACAAGATAAGGTTAAGCCGCAAGTGAAAGTAGCACCGAATATTCAGAACAAAACACTCGAGAAAGCCTCAAAGGACTATGAAGCAGTCATAGGTATAGAAACTCATGTCCAGCTCAACACTCTTACCAAGGCCTTTTGTAGTTGCCCTTATAATTATGGCTCTCTACCGAACACTAGCGTCTGCCCCGTATGCATGGGTCTGCCTGGTGCTTTACCGGTTTTGAACATGAAGGTCATTGAGTCTGCAGTTAAAGTCGGGCTTTCACTCAATTGCAAATTGTCATTCAACTCAAAGTTTGATAGGAAACAGTACTTTTACCCGGACCTTCCGAAGGGTTACCAAATATCACAGTTTGATGTTCCAATTGCCACTGGTGGCTACATTGATGTGGATCTTCCTTTGGAGTATGGTGGCGGGCATAGGAAATTCGGCATTACAAGAGTTCACATGGAAGAGGATGCAGGGAAGCTGCTTCATTCAGAAGGTGGAAGTTACTCACAGGAAAGCTTCATTAGATTAGTTGATTTAAACAGAGCCGGGGTGCCTTTGCTTGAGATTGTTTCTGAACCTGATATGAGAACTGGTATTGAAGCTGCAGAATATGCTGCAGAATTACAGAGGTTGGTTCGGTACTTGGGAGTGAGTAATGGGAATATGCAAGAAGGTTCACTTCGTTGTGATGTGAATATCTCTGTTCGACCAATTGGGCACATAGAGTTTGGGACAAAGGTGGAGATAAAAAATTTGAATTCATTTTCCTCTGTGAGCAGGGCAATAGATTATGAAATCTCCAGGCAGGTGCTTCTTCATAGTCAAGGCGAGGACAAAGAAATTGTGCAGGAAACTCGTCTATGGGAAGAAGGAGCTCAGAAAACAGTTACAATGAGAAAGAAAGAAGGACTTGCTGATTACCGATATTTCCCAGAACCAGACCTTCCAGGAGTTTTCCTCACCCAAGACTATGTTGATGGTATTCGTAATACATTGCCTGAACTTCCAGAAACGAAGCGTCGGAGATATGAAAAGATGGGTCTGAGTATGCAGGATGTTCTTTTTCTGGCCAACGATGTAAACGTTGCAGAGTTTTTTGATACTACTATTACAAAGGGTGCTGATGTGAAGCTAGCTACCAACTGGATAATGGGTGATATTGCTGCCTACATGAAAAATGAAAAATTGACCATCAATGAGATTAAGCTTAGCCCCCAAGAGTTGGCTGAGTTAATAGCTTCCATAAAAGATGGGACTATTAGTGGGAAAATAGGAAAAGAGATACTGTTTGAGCTTCTAGCCAAGGGTGGTACTGTGAAGGGACTGATTGAAGAAAAAGATTTAGTACAGATAGTAGATCCTGCTGAGATTGAAAAAATGGTAGAAAAGGTGGTGTCAGAGAATCCAAAGCAGCTGGAACAATATCGTGGTGGAAAAACTAAACTGCAAGGTTATTTTGCCGGGCAGGTAATGAAACTATCAAAAGGAAAAGCAAATCCAGGAGTCCTAAACAAGATCCTTTTAGAGAAATTAAACGCCAAAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006139 GO:0006399 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016070 GO:0016874 GO:0016879 GO:0016884 GO:0019752 GO:0034641 GO:0034660 GO:0043038 GO:0043039 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0050567 GO:0070681 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00970 ko01100 map00970 map01100

Pfam Domains

Protein Families

GatB_N GatB_Yqey

Protein Analysis

556

Amino Acids

61.8

Weight (kDa)

7.94

Isoelectric Point (pI)

40.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GatB_N	PF02934	72 - 365	6.8e-114	GatB/GatE catalytic domain
GatB_Yqey	PF02637	404 - 551	2.4e-51	GatB domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002534)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48520 AT1G48520 AT1G48520
fragaria_vesca	FvH4_4g05030 FvH4_4g05030 FvH4_4g05030 FvH4_4g05030 FvH4_4g05030 FvH4_4g05030 FvH4_4g05030 FvH4_4g05030 FvH4_4g05030
malus_domestica	MD13G1223700.v1.1 MD16G1228500.v1.1
prunus_persica	Prupe.1G050600_v2.0.a1
pyrus_communis	pycom13g19770 pycom16g19100
rosa_chinensis	RchiOBHm_Chr4g0395911 RchiOBHm_Chr7g0203561
rosa_laevigata	RLG00000003518 RLG00000009588
rosa_multiflora	Rmu_sc0001103.1_g000011 Rmu_sc0007757.1_g000003
rosa_roxburghii	Rroxscaffold_3G00253680 Rroxscaffold_5G00340680
rosa_rugosa	Rorug03G0353500.1 Rorug03G0353600 Rorug07G0077000
rosa_samantha	Rh4AG062900 Rh4AG063900 Rh4AG066700 Rh4BG062600 Rh4CG068900 Rh4DG058900 Rh7AG206600 Rh7BG206100 Rh7BG337200 Rh7CG219200 Rh7DG213800
rosa_wichuraiana	Rw4G005170 Rw7G018030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	279
AarI	CACCTGC	1 cut(s)	916
Acc36I	ACCTGC	2 cut(s)	916, 1576
AccB1I	GGYRCC	1 cut(s)	670
AccB7I	CCANNNNNTGG	1 cut(s)	1342
AciI	CCGC	3 cut(s)	123, 146, 543
AclI	AACGTT	1 cut(s)	1203
AclWI	GGATC	3 cut(s)	528, 1472, 1630
AcoI	YGGCCR	1 cut(s)	1188
AcsI	RAATTY	3 cut(s)	554, 871, 877
AfaI	GTAC	4 cut(s)	440, 761, 1432, 1467
AfiI	CCNNNNNNNGG	2 cut(s)	460, 1342
AgeI	ACCGGT	1 cut(s)	343
AgsI	TTSAA	6 cut(s)	352, 415, 719, 877, 1451, 1493
AjnI	CCWGG	4 cut(s)	331, 920, 1066, 1618
Alw21I	GWGCWC	1 cut(s)	997
AlwI	GGATC	3 cut(s)	528, 1472, 1630
Ama87I	CYCGRG	1 cut(s)	185
AoxI	GGCC	2 cut(s)	258, 1188
ApeKI	GCWGC	5 cut(s)	598, 722, 734, 1283, 1531
ApoI	RAATTY	3 cut(s)	554, 871, 877
AsiGI	ACCGGT	1 cut(s)	343
AspLEI	GCGC	1 cut(s)	107
AspS9I	GGNCC	1 cut(s)	451
AsuC2I	CCSGG	4 cut(s)	115, 449, 667, 1582
AsuHPI	GGTGA	2 cut(s)	1072, 1286
AsuNHI	GCTAGC	1 cut(s)	1252
AvaI	CYCGRG	1 cut(s)	185
AvaII	GGWCC	1 cut(s)	451
BaeGI	GKGCMC	1 cut(s)	840
BalI	TGGCCA	1 cut(s)	1190
BanI	GGYRCC	1 cut(s)	670
BanII	GRGCYC	1 cut(s)	997
BarI	GAAGNNNNNNTAC	2 cut(s)	13, 45
Bbv12I	GWGCWC	1 cut(s)	997
BbvI	GCAGC	5 cut(s)	585, 709, 721, 1270, 1543
BccI	CCATC	4 cut(s)	1091, 1150, 1319, 1364
BcgI	CGANNNNNNTGC	2 cut(s)	956, 990
BciT130I	CCWGG	4 cut(s)	333, 922, 1068, 1620
BcnI	CCSGG	4 cut(s)	115, 449, 667, 1582
BfaI	CTAG	3 cut(s)	303, 1253, 1418
BfmI	CTRYAG	3 cut(s)	372, 723, 735
BfuAI	ACCTGC	2 cut(s)	916, 1576
BisI	GCNGC	7 cut(s)	123, 146, 599, 723, 735, 1284, 1532
BlpI	GCTNAGC	1 cut(s)	1328
BlsI	GCNGC	7 cut(s)	124, 147, 600, 724, 736, 1285, 1533
BmcAI	AGTACT	1 cut(s)	440
Bme1390I	CCNGG	8 cut(s)	115, 333, 449, 667, 922, 1068, 1582, 1620
Bme18I	GGWCC	1 cut(s)	451
BmeT110I	CYCGRG	1 cut(s)	185
BmgT120I	GGNCC	1 cut(s)	451
BmiI	GGNNCC	1 cut(s)	672
BmrFI	CCNGG	8 cut(s)	115, 333, 449, 667, 922, 1068, 1582, 1620
BmsI	GCATC	1 cut(s)	577
BmtI	GCTAGC	1 cut(s)	1256
BplI	GAGNNNNNCTC	4 cut(s)	179, 211, 1062, 1094
BpmI	CTGGAG	1 cut(s)	904
Bpu1102I	GCTNAGC	1 cut(s)	1328
BpuEI	CTTGAG	1 cut(s)	701
BpuMI	CCSGG	4 cut(s)	115, 449, 667, 1582
BsaBI	GATNNNNATC	1 cut(s)	519
BsaJI	CCNNGG	3 cut(s)	255, 666, 1422
BsaWI	WCCGGW	1 cut(s)	343
Bsc4I	CCNNNNNNNGG	2 cut(s)	460, 1342
Bse118I	RCCGGY	1 cut(s)	343
Bse1I	ACTGG	3 cut(s)	505, 715, 1268
Bse3DI	GCAATG	1 cut(s)	1112
Bse8I	GATNNNNATC	1 cut(s)	519
BseBI	CCWGG	4 cut(s)	333, 922, 1068, 1620
BseDI	CCNNGG	3 cut(s)	255, 666, 1422
BseGI	GGATG	2 cut(s)	592, 1180
BseJI	GATNNNNATC	1 cut(s)	519
BseLI	CCNNNNNNNGG	2 cut(s)	460, 1342
BseMI	GCAATG	1 cut(s)	1112
BseMII	CTCAG	4 cut(s)	1010, 1154, 1338, 1476
BseNI	ACTGG	3 cut(s)	505, 715, 1268
BseRI	GAGGAG	1 cut(s)	115
BseSI	GKGCMC	1 cut(s)	840
BseXI	GCAGC	5 cut(s)	585, 709, 721, 1270, 1543
BsgI	GTGCAG	2 cut(s)	42, 986
BshFI	GGCC	2 cut(s)	260, 1190
BshNI	GGYRCC	1 cut(s)	670
BshTI	ACCGGT	1 cut(s)	343
BsiHKAI	GWGCWC	1 cut(s)	997
BsiHKCI	CYCGRG	1 cut(s)	185
BsiSI	CCGG	5 cut(s)	115, 344, 449, 666, 1581
BslFI	GGGAC	3 cut(s)	865, 1387, 1455
BslI	CCNNNNNNNGG	2 cut(s)	460, 1342
BsmFI	GGGAC	3 cut(s)	865, 1387, 1455
BsnI	GGCC	2 cut(s)	260, 1190
BsoBI	CYCGRG	1 cut(s)	185
Bsp1286I	GDGCHC	2 cut(s)	840, 997
Bsp143I	GATC	4 cut(s)	12, 520, 1477, 1635
Bsp1720I	GCTNAGC	1 cut(s)	1328
BspACI	CCGC	3 cut(s)	123, 146, 543
BspANI	GGCC	2 cut(s)	260, 1190
BspCNI	CTCAG	4 cut(s)	1009, 1155, 1339, 1477
BspLI	GGNNCC	1 cut(s)	672
BspMAI	CTGCAG	3 cut(s)	376, 727, 739
BspMI	ACCTGC	2 cut(s)	916, 1576
BspOI	GCTAGC	1 cut(s)	1256
BspPI	GGATC	3 cut(s)	528, 1472, 1630
BspT107I	GGYRCC	1 cut(s)	670
BsrDI	GCAATG	1 cut(s)	1112
BsrFI	RCCGGY	1 cut(s)	343
BsrI	ACTGG	3 cut(s)	505, 715, 1268
BssAI	RCCGGY	1 cut(s)	343
BssECI	CCNNGG	3 cut(s)	255, 666, 1422
BssMI	GATC	4 cut(s)	12, 520, 1477, 1635
BssT1I	CCWWGG	2 cut(s)	255, 1422
Bst2UI	CCWGG	4 cut(s)	333, 922, 1068, 1620
Bst4CI	ACNGT	5 cut(s)	438, 480, 1006, 1407, 1435
Bst6I	CTCTTC	1 cut(s)	576
BstAPI	GCANNNNNTGC	1 cut(s)	731
BstC8I	GCNNGC	2 cut(s)	545, 1254
BstDEI	CTNAG	6 cut(s)	65, 996, 1163, 1328, 1347, 1485
BstEII	GGTNACC	1 cut(s)	464
BstENI	CCTNNNNNAGG	1 cut(s)	458
BstF5I	GGATG	2 cut(s)	592, 1180
BstHHI	GCGC	1 cut(s)	107
BstKTI	GATC	4 cut(s)	15, 523, 1480, 1638
BstMBI	GATC	4 cut(s)	12, 520, 1477, 1635
BstMWI	GCNNNNNNNGC	2 cut(s)	318, 731
BstNI	CCWGG	4 cut(s)	333, 922, 1068, 1620
BstPI	GGTNACC	1 cut(s)	464
BstSCI	CCNGG	8 cut(s)	113, 331, 447, 665, 920, 1066, 1580, 1618
BstSFI	CTRYAG	3 cut(s)	372, 723, 735
BstSLI	GKGCMC	1 cut(s)	840
BstV1I	GCAGC	5 cut(s)	585, 709, 721, 1270, 1543
BstX2I	RGATCY	3 cut(s)	520, 1477, 1635
BstYI	RGATCY	3 cut(s)	520, 1477, 1635
BsuRI	GGCC	2 cut(s)	260, 1190
BtsCI	GGATG	2 cut(s)	592, 1180
BtsIMutI	CAGTG	1 cut(s)	498
BveI	ACCTGC	2 cut(s)	916, 1576
Cac8I	GCNNGC	2 cut(s)	545, 1254
CfoI	GCGC	1 cut(s)	107
Cfr10I	RCCGGY	1 cut(s)	343
Cfr13I	GGNCC	1 cut(s)	451
CseI	GACGC	2 cut(s)	295, 1127
Csp6I	GTAC	4 cut(s)	439, 760, 1431, 1466
CspAI	ACCGGT	1 cut(s)	343
CviAII	CATG	5 cut(s)	233, 322, 355, 577, 1291
CviQI	GTAC	4 cut(s)	439, 760, 1431, 1466
DdeI	CTNAG	6 cut(s)	65, 996, 1163, 1328, 1347, 1485
DpnI	GATC	4 cut(s)	14, 522, 1479, 1637
DpnII	GATC	4 cut(s)	12, 520, 1477, 1635
DraI	TTTAAA	1 cut(s)	657
EaeI	YGGCCR	1 cut(s)	1188
Eam1104I	CTCTTC	1 cut(s)	576
EarI	CTCTTC	1 cut(s)	576
Ecl136II	GAGCTC	1 cut(s)	995
Eco130I	CCWWGG	2 cut(s)	255, 1422
Eco147I	AGGCCT	1 cut(s)	260
Eco24I	GRGCYC	1 cut(s)	997
Eco47I	GGWCC	1 cut(s)	451
Eco53kI	GAGCTC	1 cut(s)	995
Eco88I	CYCGRG	1 cut(s)	185
Eco91I	GGTNACC	1 cut(s)	464
EcoICRI	GAGCTC	1 cut(s)	995
EcoNI	CCTNNNNNAGG	1 cut(s)	458
EcoO65I	GGTNACC	1 cut(s)	464
EcoRI	GAATTC	1 cut(s)	877
EcoRII	CCWGG	4 cut(s)	331, 920, 1066, 1618
EcoT14I	CCWWGG	2 cut(s)	255, 1422
EcoT22I	ATGCAT	1 cut(s)	323
EcoT38I	GRGCYC	1 cut(s)	997
ErhI	CCWWGG	2 cut(s)	255, 1422
FaeI	CATG	5 cut(s)	236, 325, 358, 580, 1294
FalI	AAGNNNNNCTT	6 cut(s)	372, 404, 783, 815, 1014, 1046
FaqI	GGGAC	3 cut(s)	865, 1387, 1455
FatI	CATG	5 cut(s)	232, 321, 354, 576, 1290
FauI	CCCGC	1 cut(s)	536
Fnu4HI	GCNGC	7 cut(s)	123, 146, 599, 723, 735, 1284, 1532
FokI	GGATG	2 cut(s)	599, 1187
FriOI	GRGCYC	1 cut(s)	997
Fsp4HI	GCNGC	7 cut(s)	123, 146, 599, 723, 735, 1284, 1532
FspBI	CTAG	3 cut(s)	303, 1253, 1418
GlaI	GCGC	1 cut(s)	106
GluI	GCNGC	7 cut(s)	123, 146, 599, 723, 735, 1284, 1532
GsuI	CTGGAG	1 cut(s)	904
HaeIII	GGCC	2 cut(s)	260, 1190
HapII	CCGG	5 cut(s)	115, 344, 449, 666, 1581
HgaI	GACGC	2 cut(s)	295, 1127
HhaI	GCGC	1 cut(s)	107
Hin1II	CATG	5 cut(s)	236, 325, 358, 580, 1294
Hin6I	GCGC	1 cut(s)	105
HinP1I	GCGC	1 cut(s)	105
HindIII	AAGCTT	2 cut(s)	634, 1325
HinfI	GANTC	3 cut(s)	368, 1522, 1623
HpaII	CCGG	5 cut(s)	115, 344, 449, 666, 1581
HphI	GGTGA	2 cut(s)	1072, 1286
Hpy166II	GTNNAC	3 cut(s)	574, 797, 1201
Hpy188I	TCNGA	8 cut(s)	174, 459, 610, 694, 999, 1143, 1164, 1519
Hpy188III	TCNNGA	2 cut(s)	187, 1127
Hpy8I	GTNNAC	3 cut(s)	574, 797, 1201
Hpy99I	CGWCG	1 cut(s)	1143
HpyCH4III	ACNGT	5 cut(s)	438, 480, 1006, 1407, 1435
HpyCH4IV	ACGT	1 cut(s)	1203
HpyF10VI	GCNNNNNNNGC	2 cut(s)	318, 731
HpyF3I	CTNAG	6 cut(s)	65, 996, 1163, 1328, 1347, 1485
HpySE526I	ACGT	1 cut(s)	1203
Hsp92II	CATG	5 cut(s)	236, 325, 358, 580, 1294
HspAI	GCGC	1 cut(s)	105
Kzo9I	GATC	4 cut(s)	12, 520, 1477, 1635
LmnI	GCTCC	3 cut(s)	51, 102, 992
Lsp1109I	GCAGC	5 cut(s)	585, 709, 721, 1270, 1543
LweI	GCATC	1 cut(s)	577
MaeI	CTAG	3 cut(s)	303, 1253, 1418
MaeII	ACGT	1 cut(s)	1203
MaeIII	GTNAC	3 cut(s)	464, 620, 1006
MalI	GATC	4 cut(s)	14, 522, 1479, 1637
MboI	GATC	4 cut(s)	12, 520, 1477, 1635
MboII	GAAGA	6 cut(s)	81, 515, 593, 926, 998, 1463
MfeI	CAATTG	3 cut(s)	397, 492, 831
MflI	RGATCY	3 cut(s)	520, 1477, 1635
MhlI	GDGCHC	2 cut(s)	840, 997
MlsI	TGGCCA	1 cut(s)	1190
MluNI	TGGCCA	1 cut(s)	1190
MlyI	GAGTC	2 cut(s)	377, 1632
MmeI	TCCRAC	1 cut(s)	1121
MnlI	CCTC	7 cut(s)	93, 205, 577, 741, 898, 943, 1088
Mox20I	TGGCCA	1 cut(s)	1190
Mph1103I	ATGCAT	1 cut(s)	323
MscI	TGGCCA	1 cut(s)	1190
MseI	TTAA	6 cut(s)	141, 378, 656, 1323, 1352, 1652
MslI	CAYNNNNRTG	1 cut(s)	515
Msp20I	TGGCCA	1 cut(s)	1190
MspA1I	CMGCKG	1 cut(s)	1534
MspI	CCGG	5 cut(s)	115, 344, 449, 666, 1581
MspR9I	CCNGG	8 cut(s)	115, 333, 449, 667, 922, 1068, 1582, 1620
MunI	CAATTG	3 cut(s)	397, 492, 831
MvaI	CCWGG	4 cut(s)	333, 922, 1068, 1620
MwoI	GCNNNNNNNGC	2 cut(s)	318, 731
NciI	CCSGG	4 cut(s)	115, 449, 667, 1582
NdeII	GATC	4 cut(s)	12, 520, 1477, 1635
NheI	GCTAGC	1 cut(s)	1252
NlaIII	CATG	5 cut(s)	236, 325, 358, 580, 1294
NlaIV	GGNNCC	1 cut(s)	672
NsiI	ATGCAT	1 cut(s)	323
PaeR7I	CTCGAG	1 cut(s)	185
PaqCI	CACCTGC	1 cut(s)	916
PceI	AGGCCT	1 cut(s)	260
PcsI	WCGNNNNNNNCGW	1 cut(s)	1200
PfeI	GAWTC	1 cut(s)	1522
PflMI	CCANNNNNTGG	1 cut(s)	1342
PfoI	TCCNGGA	2 cut(s)	1066, 1618
PinAI	ACCGGT	1 cut(s)	343
PkrI	GCNGC	7 cut(s)	124, 147, 600, 724, 736, 1285, 1533
PleI	GAGTC	2 cut(s)	376, 1631
PpsI	GAGTC	2 cut(s)	376, 1631
PsiI	TTATAA	1 cut(s)	279
Psp124BI	GAGCTC	1 cut(s)	997
Psp1406I	AACGTT	1 cut(s)	1203
Psp6I	CCWGG	4 cut(s)	331, 920, 1066, 1618
PspEI	GGTNACC	1 cut(s)	464
PspGI	CCWGG	4 cut(s)	331, 920, 1066, 1618
PspN4I	GGNNCC	1 cut(s)	672
PspPI	GGNCC	1 cut(s)	451
PstI	CTGCAG	3 cut(s)	376, 727, 739
PsuI	RGATCY	3 cut(s)	520, 1477, 1635
PvuII	CAGCTG	1 cut(s)	1534
RsaI	GTAC	4 cut(s)	440, 761, 1432, 1467
RsaNI	GTAC	4 cut(s)	439, 760, 1431, 1466
RseI	CAYNNNNRTG	1 cut(s)	515
SacI	GAGCTC	1 cut(s)	997
SaqAI	TTAA	6 cut(s)	141, 378, 656, 1323, 1352, 1652
SatI	GCNGC	7 cut(s)	123, 146, 599, 723, 735, 1284, 1532
Sau3AI	GATC	4 cut(s)	12, 520, 1477, 1635
Sau96I	GGNCC	1 cut(s)	451
ScaI	AGTACT	1 cut(s)	440
SchI	GAGTC	2 cut(s)	377, 1632
ScrFI	CCNGG	8 cut(s)	115, 333, 449, 667, 922, 1068, 1582, 1620
SduI	GDGCHC	2 cut(s)	840, 997
SfaNI	GCATC	1 cut(s)	577
SfcI	CTRYAG	3 cut(s)	372, 723, 735
Sfr274I	CTCGAG	1 cut(s)	185
SinI	GGWCC	1 cut(s)	451
SlaI	CTCGAG	1 cut(s)	185
SmiMI	CAYNNNNRTG	1 cut(s)	515
SmlI	CTYRAG	2 cut(s)	185, 680
SmoI	CTYRAG	2 cut(s)	185, 680
SseBI	AGGCCT	1 cut(s)	260
SsiI	CCGC	3 cut(s)	123, 146, 543
SspI	AATATT	1 cut(s)	169
SspMI	CTAG	3 cut(s)	303, 1253, 1418
SstI	GAGCTC	1 cut(s)	997
StuI	AGGCCT	1 cut(s)	260
StyD4I	CCNGG	8 cut(s)	113, 331, 447, 665, 920, 1066, 1580, 1618
StyI	CCWWGG	2 cut(s)	255, 1422
TaaI	ACNGT	5 cut(s)	438, 480, 1006, 1407, 1435
TaiI	ACGT	1 cut(s)	1206
TaqI	TCGA	2 cut(s)	186, 826
TatI	WGTACW	2 cut(s)	438, 1465
TauI	GCSGC	2 cut(s)	125, 148
TfiI	GAWTC	1 cut(s)	1522
Tru1I	TTAA	6 cut(s)	141, 378, 656, 1323, 1352, 1652
Tru9I	TTAA	6 cut(s)	141, 378, 656, 1323, 1352, 1652
TscAI	CASTG	1 cut(s)	505
TseI	GCWGC	5 cut(s)	598, 722, 734, 1283, 1531
TspRI	CASTG	1 cut(s)	505
Van91I	CCANNNNNTGG	1 cut(s)	1342
VpaK11BI	GGWCC	1 cut(s)	451
XagI	CCTNNNNNAGG	1 cut(s)	458
XapI	RAATTY	3 cut(s)	554, 871, 877
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1267
XhoI	CTCGAG	1 cut(s)	185
XspI	CTAG	3 cut(s)	303, 1253, 1418
ZrmI	AGTACT	1 cut(s)	440
Zsp2I	ATGCAT	1 cut(s)	323

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.