RchiOBHm_Chr7g0203561

Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln)

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
21250349 .. 21256857
6509 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18221

Sequence Viewer

Length: 1665 bp
ATGGCCTCCACAGTTTTCAGAAGCTTTCAAACGCACCCTTTTGTGTTCCATCCCACCACATTACTCAGAAGAAAGAATGTTCTTTTGTATTGCACAATGAGAAGTCAACAAACCCAGACAGCCACCCAAGAGAAGGTTAAGCCACAAGTGAAAGTTTCTAACTTGAACCCGAATAAGAAGCTGGAGAATATCTCAAAGGACTATGAAGCAGTCATAGGTATCGAAACCCATGTCCAGCTATCTACTCAGACCAAGGCCTTTTGTAGTTGCCCTTATAATTACGGCTCTCAACCAAACACTAGTATTTGCCCCATTTGTATGGGTCTGCCTGGTGCTTTACCGATTTTGAACTTTAAGGTCATTGAGTCTGCTGTGAAAGTTGGGCTTGCACTCAATTGCAAATTGGCAATGAACTCGAAGTTTGATAGGAAACAATACTTTTACGCGGACCTGCCAAAGGGGTACCAAATATCCCAGTTTGATGTTCCAATTGCGACCGGTGGCTACATTGATTTGGATATTCCAGTAGAGTTTGGTGGTGGGCATAGGAAGTTTGGCATTACAAGAGTTCACATGGAAGAGGATGCAGGGAAGCTGATGCATTCAGACGATGGAAGTTACTCACAGGAAAGTACATTTCGCTTTGTTGATCTAAATAGAGCGGGTGTGCCCTTGCTTGAGATTGTTTCTGAACCTGATATGAGAAATGGTATTGAAGCTGCAGAATATGCTGCAGAAATACAGAGGGTGGTTCGGTATTTGGGAGTGAGTAATGGCAATATGCAAGAAGGTTCACTTCGTTGTGATGTCAATGTTTCTATTCGACCAATTGGGCAATTACAGTTTGGGACGAAGGTGGAGATAAAAAATTTGAACGCTTTTTCAGCAGTGAGCAGGGCAATTGACTATGAAATTTCGAGGCAGGTGCTTCTTCATAGTCAAGGCCAAGACAAAGAAATTGTACAGGAAACACGACTATGGGACGAAGGAGCTCAGAAAACAGTTACAATGAGGAAGAAAGAAGGACTATCTGATTACCGATATTTTCCCGAACCAGACCTTCCAGGAGTTTTCCTCACCCAGGACTATGTTGATGGTATTCATAACTCTTTGCCTGAACTTCCAGAAATGAAGCGTCGAAGGTATGAAAAGATGGGCCTAAGCATGCAGGACATTCTTTTCCTTGCTAATGACATGAATGTTGCAGAATTTTTTGATACCACTATTAAGAAGGGTGCTGATGCGAAGCTAGCTGCCAACTGGATAATGAGTGATTTTGCTGCCTATATGAAAAATGAAGAGTTGTCCATCAATGAGGTCAAGCTTTCCCCCCAAGAGTTGGCTGAGTTAATAGCTTTCATAAAAGATGGGACTATTAGTGGGAAGATAGGGAAACAGATATTGTTTGAGCTACTAGCAAAAGGTGGTACTGTGAAGGGACTGATAGAAGAAAAAGATTTAGTTCAGATTGTAGATCCCGCTGAGATTGAGAAAATGGTGGAAAAGGTGTTGTCAGAGAATCCAAAGCAGCTGGACCAATATCGTGGTGGAAAGACTAAGCTGCAAGGTTATTTTGCTGGCCAGATAATGAAACTATCGAAAGGAAAAGCAAATCCAGGGCTTCTAAACAAGATTCTGTTAGAGAAATTAAATGCCAAAAGCTGA

Protein Analysis

554

Amino Acids

62.1

Weight (kDa)

7.97

Isoelectric Point (pI)

40.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GatB_N PF02934 71 - 364 1.2e-114 GatB/GatE catalytic domain
GatB_Yqey PF02637 403 - 550 2.3e-52 GatB domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 276
AarI CACCTGC 1 cut(s) 913
Acc36I ACCTGC 2 cut(s) 459, 913
Acc65I GGTACC 1 cut(s) 462
AccB1I GGYRCC 1 cut(s) 462
AccB7I CCANNNNNTGG 1 cut(s) 1339
AccBSI CCGCTC 1 cut(s) 662
AccII CGCG 1 cut(s) 446
AciI CCGC 3 cut(s) 446, 662, 1479
AclWI GGATC 1 cut(s) 1469
AcoI YGGCCR 1 cut(s) 1579
AcsI RAATTY 3 cut(s) 868, 912, 1208
AfaI GTAC 4 cut(s) 464, 634, 963, 1429
AfiI CCNNNNNNNGG 4 cut(s) 133, 457, 1081, 1339
AgeI ACCGGT 1 cut(s) 497
AgsI TTSAA 5 cut(s) 29, 166, 349, 716, 874
AhlI ACTAGT 1 cut(s) 299
AjnI CCWGG 4 cut(s) 328, 1063, 1080, 1615
Alw21I GWGCWC 1 cut(s) 994
AlwI GGATC 1 cut(s) 1469
AoxI GGCC 5 cut(s) 3, 255, 943, 1156, 1579
ApeKI GCWGC 6 cut(s) 719, 731, 1253, 1280, 1528, 1561
ApoI RAATTY 3 cut(s) 868, 912, 1208
ArsI GACNNNNNNTTYG 2 cut(s) 216, 248
AsiGI ACCGGT 1 cut(s) 497
Asp718I GGTACC 1 cut(s) 462
AspS9I GGNCC 3 cut(s) 448, 1156, 1534
AsuHPI GGTGA 1 cut(s) 1069
AsuNHI GCTAGC 1 cut(s) 1249
AvaII GGWCC 2 cut(s) 448, 1534
BaeGI GKGCMC 1 cut(s) 672
BalI TGGCCA 1 cut(s) 1581
BanI GGYRCC 1 cut(s) 462
BanII GRGCYC 1 cut(s) 994
Bbv12I GWGCWC 1 cut(s) 994
BbvI GCAGC 6 cut(s) 706, 718, 1240, 1267, 1540, 1548
BccI CCATC 6 cut(s) 57, 605, 1088, 1147, 1316, 1361
BceAI ACGGC 1 cut(s) 298
BcgI CGANNNNNNTGC 4 cut(s) 396, 430, 907, 941
BciT130I CCWGG 4 cut(s) 330, 1065, 1082, 1617
BcuI ACTAGT 1 cut(s) 299
BfaI CTAG 3 cut(s) 300, 1250, 1415
BfmI CTRYAG 2 cut(s) 720, 732
BfuAI ACCTGC 2 cut(s) 459, 913
BisI GCNGC 6 cut(s) 720, 732, 1254, 1281, 1529, 1562
BlsI GCNGC 6 cut(s) 721, 733, 1255, 1282, 1530, 1563
Bme1390I CCNGG 4 cut(s) 330, 1065, 1082, 1617
Bme18I GGWCC 2 cut(s) 448, 1534
BmgT120I GGNCC 3 cut(s) 448, 1156, 1534
BmiI GGNNCC 1 cut(s) 464
BmrFI CCNGG 4 cut(s) 330, 1065, 1082, 1617
BmrI ACTGGG 1 cut(s) 469
BmsI GCATC 3 cut(s) 574, 588, 1231
BmtI GCTAGC 1 cut(s) 1253
BmuI ACTGGG 1 cut(s) 469
BplI GAGNNNNNCTC 4 cut(s) 176, 208, 1059, 1091
BpmI CTGGAG 1 cut(s) 203
Bpu10I CCTNAGC 1 cut(s) 1160
BpuEI CTTGAG 1 cut(s) 698
BsaJI CCNNGG 3 cut(s) 252, 1080, 1616
BsaWI WCCGGW 1 cut(s) 497
Bsc4I CCNNNNNNNGG 4 cut(s) 133, 457, 1081, 1339
Bse118I RCCGGY 1 cut(s) 497
Bse1I ACTGG 3 cut(s) 475, 524, 1265
Bse3DI GCAATG 1 cut(s) 414
BseBI CCWGG 4 cut(s) 330, 1065, 1082, 1617
BseDI CCNNGG 3 cut(s) 252, 1080, 1616
BseGI GGATG 2 cut(s) 49, 589
BseLI CCNNNNNNNGG 4 cut(s) 133, 457, 1081, 1339
BseMI GCAATG 1 cut(s) 414
BseMII CTCAG 5 cut(s) 79, 260, 1007, 1335, 1473
BseNI ACTGG 3 cut(s) 475, 524, 1265
BseSI GKGCMC 1 cut(s) 672
BseXI GCAGC 6 cut(s) 706, 718, 1240, 1267, 1540, 1548
Bsh1236I CGCG 1 cut(s) 446
Bsh1285I CGRYCG 1 cut(s) 498
BshFI GGCC 5 cut(s) 5, 257, 945, 1158, 1581
BshNI GGYRCC 1 cut(s) 462
BshTI ACCGGT 1 cut(s) 497
BsiEI CGRYCG 1 cut(s) 498
BsiHKAI GWGCWC 1 cut(s) 994
BsiSI CCGG 1 cut(s) 498
BslFI GGGAC 4 cut(s) 862, 995, 1384, 1452
BslI CCNNNNNNNGG 4 cut(s) 133, 457, 1081, 1339
BsmFI GGGAC 4 cut(s) 862, 995, 1384, 1452
BsmI GAATGC 1 cut(s) 601
BsnI GGCC 5 cut(s) 5, 257, 945, 1158, 1581
Bsp1286I GDGCHC 2 cut(s) 672, 994
Bsp1407I TGTACA 1 cut(s) 961
Bsp143I GATC 2 cut(s) 649, 1474
BspACI CCGC 3 cut(s) 446, 662, 1479
BspANI GGCC 5 cut(s) 5, 257, 945, 1158, 1581
BspCNI CTCAG 5 cut(s) 78, 259, 1006, 1336, 1474
BspFNI CGCG 1 cut(s) 446
BspLI GGNNCC 1 cut(s) 464
BspMAI CTGCAG 2 cut(s) 724, 736
BspMI ACCTGC 2 cut(s) 459, 913
BspOI GCTAGC 1 cut(s) 1253
BspPI GGATC 1 cut(s) 1469
BspT107I GGYRCC 1 cut(s) 462
BsrBI CCGCTC 1 cut(s) 662
BsrDI GCAATG 1 cut(s) 414
BsrFI RCCGGY 1 cut(s) 497
BsrGI TGTACA 1 cut(s) 961
BsrI ACTGG 3 cut(s) 475, 524, 1265
BssAI RCCGGY 1 cut(s) 497
BssECI CCNNGG 3 cut(s) 252, 1080, 1616
BssMI GATC 2 cut(s) 649, 1474
BssT1I CCWWGG 1 cut(s) 252
Bst2UI CCWGG 4 cut(s) 330, 1065, 1082, 1617
Bst4CI ACNGT 4 cut(s) 13, 843, 1003, 1432
Bst6I CTCTTC 2 cut(s) 573, 1293
BstAPI GCANNNNNTGC 1 cut(s) 728
BstAUI TGTACA 1 cut(s) 961
BstC8I GCNNGC 4 cut(s) 387, 1166, 1251, 1579
BstDEI CTNAG 7 cut(s) 65, 246, 993, 1160, 1344, 1482, 1557
BstENI CCTNNNNNAGG 2 cut(s) 455, 1079
BstF5I GGATG 2 cut(s) 49, 589
BstFNI CGCG 1 cut(s) 446
BstKTI GATC 2 cut(s) 652, 1477
BstMBI GATC 2 cut(s) 649, 1474
BstMCI CGRYCG 1 cut(s) 498
BstMWI GCNNNNNNNGC 3 cut(s) 728, 884, 1250
BstNI CCWGG 4 cut(s) 330, 1065, 1082, 1617
BstNSI RCATGY 1 cut(s) 1168
BstSCI CCNGG 4 cut(s) 328, 1063, 1080, 1615
BstSFI CTRYAG 2 cut(s) 720, 732
BstSLI GKGCMC 1 cut(s) 672
BstUI CGCG 1 cut(s) 446
BstV1I GCAGC 6 cut(s) 706, 718, 1240, 1267, 1540, 1548
BstX2I RGATCY 1 cut(s) 1474
BstXI CCANNNNNNTGG 2 cut(s) 319, 1544
BstYI RGATCY 1 cut(s) 1474
BsuRI GGCC 5 cut(s) 5, 257, 945, 1158, 1581
BtsCI GGATG 2 cut(s) 49, 589
BtsI GCAGTG 1 cut(s) 894
BtsIMutI CAGTG 1 cut(s) 894
BveI ACCTGC 2 cut(s) 459, 913
Cac8I GCNNGC 4 cut(s) 387, 1166, 1251, 1579
Cfr10I RCCGGY 1 cut(s) 497
Cfr13I GGNCC 3 cut(s) 448, 1156, 1534
CseI GACGC 1 cut(s) 1124
Csp6I GTAC 4 cut(s) 463, 633, 962, 1428
CspAI ACCGGT 1 cut(s) 497
CviAII CATG 4 cut(s) 230, 574, 1165, 1195
CviQI GTAC 4 cut(s) 463, 633, 962, 1428
DdeI CTNAG 7 cut(s) 65, 246, 993, 1160, 1344, 1482, 1557
DpnI GATC 2 cut(s) 651, 1476
DpnII GATC 2 cut(s) 649, 1474
EaeI YGGCCR 1 cut(s) 1579
Eam1104I CTCTTC 2 cut(s) 573, 1293
EarI CTCTTC 2 cut(s) 573, 1293
Ecl136II GAGCTC 1 cut(s) 992
Eco130I CCWWGG 1 cut(s) 252
Eco147I AGGCCT 1 cut(s) 257
Eco24I GRGCYC 1 cut(s) 994
Eco47I GGWCC 2 cut(s) 448, 1534
Eco53kI GAGCTC 1 cut(s) 992
EcoICRI GAGCTC 1 cut(s) 992
EcoNI CCTNNNNNAGG 2 cut(s) 455, 1079
EcoRII CCWGG 4 cut(s) 328, 1063, 1080, 1615
EcoT14I CCWWGG 1 cut(s) 252
EcoT22I ATGCAT 1 cut(s) 603
EcoT38I GRGCYC 1 cut(s) 994
ErhI CCWWGG 1 cut(s) 252
FaeI CATG 4 cut(s) 233, 577, 1168, 1198
FalI AAGNNNNNCTT 4 cut(s) 369, 401, 780, 812
FaqI GGGAC 4 cut(s) 862, 995, 1384, 1452
FatI CATG 4 cut(s) 229, 573, 1164, 1194
FauI CCCGC 2 cut(s) 655, 1486
Fnu4HI GCNGC 6 cut(s) 720, 732, 1254, 1281, 1529, 1562
FokI GGATG 2 cut(s) 36, 596
FriOI GRGCYC 1 cut(s) 994
Fsp4HI GCNGC 6 cut(s) 720, 732, 1254, 1281, 1529, 1562
FspBI CTAG 3 cut(s) 300, 1250, 1415
GluI GCNGC 6 cut(s) 720, 732, 1254, 1281, 1529, 1562
GsuI CTGGAG 1 cut(s) 203
HaeIII GGCC 5 cut(s) 5, 257, 945, 1158, 1581
HapII CCGG 1 cut(s) 498
HgaI GACGC 1 cut(s) 1124
Hin1II CATG 4 cut(s) 233, 577, 1168, 1198
HincII GTYRAC 1 cut(s) 107
HindII GTYRAC 1 cut(s) 107
HindIII AAGCTT 2 cut(s) 22, 1322
HinfI GANTC 3 cut(s) 365, 1519, 1633
HpaII CCGG 1 cut(s) 498
HphI GGTGA 1 cut(s) 1069
Hpy166II GTNNAC 3 cut(s) 107, 571, 794
Hpy188I TCNGA 9 cut(s) 20, 68, 249, 607, 691, 996, 1033, 1467, 1516
Hpy188III TCNNGA 2 cut(s) 1049, 1124
Hpy8I GTNNAC 3 cut(s) 107, 571, 794
Hpy99I CGWCG 1 cut(s) 1140
HpyAV CCTTC 9 cut(s) 127, 782, 847, 980, 1016, 1070, 1134, 1225, 1429
HpyCH4III ACNGT 4 cut(s) 13, 843, 1003, 1432
HpyF10VI GCNNNNNNNGC 3 cut(s) 728, 884, 1250
HpyF3I CTNAG 7 cut(s) 65, 246, 993, 1160, 1344, 1482, 1557
Hsp92II CATG 4 cut(s) 233, 577, 1168, 1198
KpnI GGTACC 1 cut(s) 466
Kzo9I GATC 2 cut(s) 649, 1474
LmnI GCTCC 1 cut(s) 989
Lsp1109I GCAGC 6 cut(s) 706, 718, 1240, 1267, 1540, 1548
LweI GCATC 3 cut(s) 574, 588, 1231
MaeI CTAG 3 cut(s) 300, 1250, 1415
MaeIII GTNAC 2 cut(s) 617, 1003
MalI GATC 2 cut(s) 651, 1476
MbiI CCGCTC 1 cut(s) 662
MboI GATC 2 cut(s) 649, 1474
MboII GAAGA 7 cut(s) 81, 590, 923, 1027, 1310, 1396, 1460
MfeI CAATTG 4 cut(s) 394, 489, 828, 900
MflI RGATCY 1 cut(s) 1474
MhlI GDGCHC 2 cut(s) 672, 994
MlsI TGGCCA 1 cut(s) 1581
MluNI TGGCCA 1 cut(s) 1581
MlyI GAGTC 1 cut(s) 374
MnlI CCTC 7 cut(s) 16, 574, 738, 912, 1005, 1085, 1309
Mox20I TGGCCA 1 cut(s) 1581
Mph1103I ATGCAT 1 cut(s) 603
MscI TGGCCA 1 cut(s) 1581
MseI TTAA 5 cut(s) 138, 354, 1227, 1349, 1649
MslI CAYNNNNRTG 2 cut(s) 317, 976
Msp20I TGGCCA 1 cut(s) 1581
MspA1I CMGCKG 2 cut(s) 1481, 1531
MspI CCGG 1 cut(s) 498
MspR9I CCNGG 4 cut(s) 330, 1065, 1082, 1617
MunI CAATTG 4 cut(s) 394, 489, 828, 900
Mva1269I GAATGC 1 cut(s) 601
MvaI CCWGG 4 cut(s) 330, 1065, 1082, 1617
MvnI CGCG 1 cut(s) 446
MwoI GCNNNNNNNGC 3 cut(s) 728, 884, 1250
NdeII GATC 2 cut(s) 649, 1474
NheI GCTAGC 1 cut(s) 1249
NlaIII CATG 4 cut(s) 233, 577, 1168, 1198
NlaIV GGNNCC 1 cut(s) 464
NsiI ATGCAT 1 cut(s) 603
NspI RCATGY 1 cut(s) 1168
PaeI GCATGC 1 cut(s) 1168
PaqCI CACCTGC 1 cut(s) 913
PceI AGGCCT 1 cut(s) 257
PctI GAATGC 1 cut(s) 601
PfeI GAWTC 2 cut(s) 1519, 1633
PflMI CCANNNNNTGG 1 cut(s) 1339
PfoI TCCNGGA 1 cut(s) 1063
PinAI ACCGGT 1 cut(s) 497
PkrI GCNGC 6 cut(s) 721, 733, 1255, 1282, 1530, 1563
PleI GAGTC 1 cut(s) 373
PpsI GAGTC 1 cut(s) 373
PsiI TTATAA 1 cut(s) 276
Psp124BI GAGCTC 1 cut(s) 994
Psp6I CCWGG 4 cut(s) 328, 1063, 1080, 1615
PspGI CCWGG 4 cut(s) 328, 1063, 1080, 1615
PspN4I GGNNCC 1 cut(s) 464
PspPI GGNCC 3 cut(s) 448, 1156, 1534
PstI CTGCAG 2 cut(s) 724, 736
PsuI RGATCY 1 cut(s) 1474
PvuII CAGCTG 1 cut(s) 1531
RsaI GTAC 4 cut(s) 464, 634, 963, 1429
RsaNI GTAC 4 cut(s) 463, 633, 962, 1428
RseI CAYNNNNRTG 2 cut(s) 317, 976
SacI GAGCTC 1 cut(s) 994
SaqAI TTAA 5 cut(s) 138, 354, 1227, 1349, 1649
SatI GCNGC 6 cut(s) 720, 732, 1254, 1281, 1529, 1562
Sau3AI GATC 2 cut(s) 649, 1474
Sau96I GGNCC 3 cut(s) 448, 1156, 1534
SchI GAGTC 1 cut(s) 374
ScrFI CCNGG 4 cut(s) 330, 1065, 1082, 1617
SduI GDGCHC 2 cut(s) 672, 994
SfaNI GCATC 3 cut(s) 574, 588, 1231
SfcI CTRYAG 2 cut(s) 720, 732
SinI GGWCC 2 cut(s) 448, 1534
SmiMI CAYNNNNRTG 2 cut(s) 317, 976
SmlI CTYRAG 1 cut(s) 677
SmoI CTYRAG 1 cut(s) 677
SpeI ACTAGT 1 cut(s) 299
SphI GCATGC 1 cut(s) 1168
SseBI AGGCCT 1 cut(s) 257
SsiI CCGC 3 cut(s) 446, 662, 1479
SspMI CTAG 3 cut(s) 300, 1250, 1415
SstI GAGCTC 1 cut(s) 994
StuI AGGCCT 1 cut(s) 257
StyD4I CCNGG 4 cut(s) 328, 1063, 1080, 1615
StyI CCWWGG 1 cut(s) 252
TaaI ACNGT 4 cut(s) 13, 843, 1003, 1432
TaqI TCGA 6 cut(s) 222, 416, 823, 917, 1138, 1598
TatI WGTACW 2 cut(s) 632, 961
TfiI GAWTC 2 cut(s) 1519, 1633
Tru1I TTAA 5 cut(s) 138, 354, 1227, 1349, 1649
Tru9I TTAA 5 cut(s) 138, 354, 1227, 1349, 1649
TscAI CASTG 1 cut(s) 894
TseI GCWGC 6 cut(s) 719, 731, 1253, 1280, 1528, 1561
TspRI CASTG 1 cut(s) 894
Van91I CCANNNNNTGG 1 cut(s) 1339
VpaK11BI GGWCC 2 cut(s) 448, 1534
XagI CCTNNNNNAGG 2 cut(s) 455, 1079
XapI RAATTY 3 cut(s) 868, 912, 1208
XceI RCATGY 1 cut(s) 1168
XcmI CCANNNNNNNNNTGG 1 cut(s) 1544
XspI CTAG 3 cut(s) 300, 1250, 1415
Zsp2I ATGCAT 1 cut(s) 603
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.