Rh4AG066700

Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Forward (+)
14017834 .. 14022452
4619 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG066700.1

Sequence Viewer

Length: 1539 bp
ATGAGAAGTGAACAAACCCAGACAGCCACCCAAGAGAAGGTTAAGCCACAAGTGAAAGTTTCTAACTTGAACCCGAATAAGAAACTGGAGAATATCTCGAAGGACTATGAAGCAGTCATAGGTATCGAAACCCATGTCCAGCTATCCACTCAGACCAAGGCCTTCTGTAGTTGCCCTTATAATTATGGCTCTCAACCAAACACTAGTATTTGCCCCATTTGTATGGGTCTGCCTGGTGCTTTACCGATTTTGAACTTTAAGGTCATTGAGTCTGCTGTGAAAGTTGGACTTGCACTCAATTGCAAATTGGCAATGAACTCGAAGTTTGATCGGAAACAATACTTTTACGCGGACCTTCCAAAGGGTTACCAAATATCCCAGTTTGATGTTCCAATTGCGACTGGTGGCTACATTGATTTGGATATTCCAGTAGAGTTTGGAGGTGGGCATAGGAAGTTCGGCATTACAAGAGTTCACATGGAAGAGGATGCAGGGAAGCTGATGCATTCAGACGACGGAAGTTACTCACAGGAAACGGGGGTGCCCTTGCTTGAGATTGTTTCTGAACCTGATATGAGAAATGGTATTGAAGCTGCAGAATATGCTGCAGAAATACAGAGGGTGGTTCGGTATTTGGGAGTGAGTAATGGCAATATGCAAGAAGGTTCACTTCGTTGTGATGTCAATGTTTCTGTTCGACCAATTGGGCAATTACAGTTTGGGACGAAGGTGGAGATAAAAAATTTGAACGCTTTTTCGGCAGTGAGCAGGGCAATTGATTATGAAATTTCGAGGCAGGTGCTTCTTCATAGTCAAGGCCAAGACAAAGAAATTGTACAGGAAACACGGCTATGGGAAGAAGGAGCTCAGAAAACAGTTACAATGAGGAAGAAAGAAGGACTATCTGATTACCGATATTTTCCTGAACCAGACCTTCCAGGAGTTTTCCTCACCCAGGACTATGTTGATGGTATTCATAACTCTTTGCCTGAACTTCCAGAAATGAAGCGTCGGAGGTATGAAAAGATGGGCCTAAGCATGCAGGACATTCTTTTCCTTGCTAACGACATGAATGTTGCAGAATTTTTTGATACTACTATTAAGAAGGGTGCTGAGGCGAAGCTAGCTGCCAACTGGATAATGAGTGATATTGCTGCCTATATGAAAAATGAAGAGTTGTCCATCACTGAGGTCAAGCTTTCCCCTCAAGAGTTGGCTGAGTTAATAGCTTCCATAAAAGATGGGACTATTAGTGGGAAGATAGGGAAACAGATATTGTTTGAGCTTCTAGCAAAGGGTGGTACTGTGAAGGGACTGATAGAAGAAAAAGATTTAGTTCAGATTGTAGATCCTGCTGAGATTGAGAAAATGGTGGAAAAGGTGTTGTCAGAGAATCCAAAGCAGCTGGACCAATATCGCAGTGGAAAGACTAAGCTGCAAGGTTATTTTGCTGGCCAGATAATGAAACTTTCAAAAGGAAAAGCAAATCCCGGGCTTCTAAACAAGATTCTGTTAGAGAAATTAAATGCCAAAAGCTGA

Protein Analysis

512

Amino Acids

57.04

Weight (kDa)

6.04

Isoelectric Point (pI)

41.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GatB_N PF02934 39 - 322 4.2e-109 GatB/GatE catalytic domain
GatB_Yqey PF02637 361 - 508 1e-51 GatB domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 180
AarI CACCTGC 1 cut(s) 787
Acc36I ACCTGC 1 cut(s) 787
AccB1I GGYRCC 1 cut(s) 541
AccII CGCG 1 cut(s) 350
AciI CCGC 1 cut(s) 350
AclWI GGATC 1 cut(s) 1343
AcoI YGGCCR 1 cut(s) 1453
AcsI RAATTY 3 cut(s) 742, 786, 1082
AfaI GTAC 2 cut(s) 837, 1303
AfiI CCNNNNNNNGG 3 cut(s) 37, 361, 955
AgsI TTSAA 5 cut(s) 70, 253, 590, 748, 1473
AhlI ACTAGT 1 cut(s) 203
AjnI CCWGG 3 cut(s) 232, 937, 954
Alw21I GWGCWC 1 cut(s) 868
AlwI GGATC 1 cut(s) 1343
Ama87I CYCGRG 1 cut(s) 1490
AoxI GGCC 4 cut(s) 159, 817, 1030, 1453
ApeKI GCWGC 6 cut(s) 593, 605, 1127, 1154, 1402, 1435
ApoI RAATTY 3 cut(s) 742, 786, 1082
ArsI GACNNNNNNTTYG 2 cut(s) 120, 152
AspS9I GGNCC 3 cut(s) 352, 1030, 1408
AsuC2I CCSGG 2 cut(s) 1491, 1492
AsuHPI GGTGA 1 cut(s) 943
AsuNHI GCTAGC 1 cut(s) 1123
AvaI CYCGRG 1 cut(s) 1490
AvaII GGWCC 2 cut(s) 352, 1408
BaeGI GKGCMC 1 cut(s) 546
BalI TGGCCA 1 cut(s) 1455
BanI GGYRCC 1 cut(s) 541
BanII GRGCYC 1 cut(s) 868
Bbv12I GWGCWC 1 cut(s) 868
BbvCI CCTCAGC 1 cut(s) 1113
BbvI GCAGC 6 cut(s) 580, 592, 1114, 1141, 1414, 1422
BccI CCATC 4 cut(s) 962, 1021, 1190, 1235
BceAI ACGGC 1 cut(s) 863
BcgI CGANNNNNNTGC 4 cut(s) 300, 334, 781, 815
BciT130I CCWGG 3 cut(s) 234, 939, 956
BcnI CCSGG 2 cut(s) 1491, 1492
BcuI ACTAGT 1 cut(s) 203
BfaI CTAG 3 cut(s) 204, 1124, 1289
BfmI CTRYAG 3 cut(s) 166, 594, 606
BfuAI ACCTGC 1 cut(s) 787
BisI GCNGC 6 cut(s) 594, 606, 1128, 1155, 1403, 1436
BlsI GCNGC 6 cut(s) 595, 607, 1129, 1156, 1404, 1437
Bme1390I CCNGG 5 cut(s) 234, 939, 956, 1491, 1492
Bme18I GGWCC 2 cut(s) 352, 1408
BmeT110I CYCGRG 1 cut(s) 1490
BmgT120I GGNCC 3 cut(s) 352, 1030, 1408
BmiI GGNNCC 1 cut(s) 543
BmrFI CCNGG 5 cut(s) 234, 939, 956, 1491, 1492
BmrI ACTGGG 1 cut(s) 373
BmsI GCATC 2 cut(s) 478, 492
BmtI GCTAGC 1 cut(s) 1127
BmuI ACTGGG 1 cut(s) 373
BplI GAGNNNNNCTC 4 cut(s) 80, 112, 933, 965
BpmI CTGGAG 1 cut(s) 107
Bpu10I CCTNAGC 2 cut(s) 1034, 1113
BpuEI CTTGAG 2 cut(s) 572, 1191
BpuMI CCSGG 2 cut(s) 1491, 1492
BsaJI CCNNGG 3 cut(s) 156, 954, 1490
Bsc4I CCNNNNNNNGG 3 cut(s) 37, 361, 955
Bse1I ACTGG 5 cut(s) 90, 379, 406, 428, 1139
Bse3DI GCAATG 1 cut(s) 318
BseBI CCWGG 3 cut(s) 234, 939, 956
BseDI CCNNGG 3 cut(s) 156, 954, 1490
BseGI GGATG 1 cut(s) 493
BseLI CCNNNNNNNGG 3 cut(s) 37, 361, 955
BseMI GCAATG 1 cut(s) 318
BseMII CTCAG 6 cut(s) 164, 881, 1104, 1179, 1209, 1347
BseNI ACTGG 5 cut(s) 90, 379, 406, 428, 1139
BseSI GKGCMC 1 cut(s) 546
BseXI GCAGC 6 cut(s) 580, 592, 1114, 1141, 1414, 1422
Bsh1236I CGCG 1 cut(s) 350
BshFI GGCC 4 cut(s) 161, 819, 1032, 1455
BshNI GGYRCC 1 cut(s) 541
BsiHKAI GWGCWC 1 cut(s) 868
BsiHKCI CYCGRG 1 cut(s) 1490
BsiSI CCGG 1 cut(s) 1491
BslFI GGGAC 3 cut(s) 736, 1258, 1326
BslI CCNNNNNNNGG 3 cut(s) 37, 361, 955
BsmFI GGGAC 3 cut(s) 736, 1258, 1326
BsmI GAATGC 1 cut(s) 505
BsnI GGCC 4 cut(s) 161, 819, 1032, 1455
BsoBI CYCGRG 1 cut(s) 1490
Bsp1286I GDGCHC 2 cut(s) 546, 868
Bsp1407I TGTACA 1 cut(s) 835
Bsp143I GATC 2 cut(s) 328, 1348
BspACI CCGC 1 cut(s) 350
BspANI GGCC 4 cut(s) 161, 819, 1032, 1455
BspCNI CTCAG 6 cut(s) 163, 880, 1105, 1180, 1210, 1348
BspFNI CGCG 1 cut(s) 350
BspLI GGNNCC 1 cut(s) 543
BspMAI CTGCAG 2 cut(s) 598, 610
BspMI ACCTGC 1 cut(s) 787
BspOI GCTAGC 1 cut(s) 1127
BspPI GGATC 1 cut(s) 1343
BspT107I GGYRCC 1 cut(s) 541
BsrDI GCAATG 1 cut(s) 318
BsrGI TGTACA 1 cut(s) 835
BsrI ACTGG 5 cut(s) 90, 379, 406, 428, 1139
BssECI CCNNGG 3 cut(s) 156, 954, 1490
BssMI GATC 2 cut(s) 328, 1348
BssT1I CCWWGG 1 cut(s) 156
Bst2UI CCWGG 3 cut(s) 234, 939, 956
Bst4CI ACNGT 3 cut(s) 717, 877, 1306
Bst6I CTCTTC 2 cut(s) 477, 1167
BstAPI GCANNNNNTGC 1 cut(s) 602
BstAUI TGTACA 1 cut(s) 835
BstC8I GCNNGC 3 cut(s) 1040, 1125, 1453
BstDEI CTNAG 8 cut(s) 150, 867, 1034, 1113, 1188, 1218, 1356, 1431
BstEII GGTNACC 1 cut(s) 365
BstENI CCTNNNNNAGG 2 cut(s) 359, 953
BstF5I GGATG 1 cut(s) 493
BstFNI CGCG 1 cut(s) 350
BstKTI GATC 2 cut(s) 331, 1351
BstMBI GATC 2 cut(s) 328, 1348
BstMWI GCNNNNNNNGC 3 cut(s) 602, 758, 1124
BstNI CCWGG 3 cut(s) 234, 939, 956
BstNSI RCATGY 1 cut(s) 1042
BstPI GGTNACC 1 cut(s) 365
BstSCI CCNGG 5 cut(s) 232, 937, 954, 1489, 1490
BstSFI CTRYAG 3 cut(s) 166, 594, 606
BstSLI GKGCMC 1 cut(s) 546
BstUI CGCG 1 cut(s) 350
BstV1I GCAGC 6 cut(s) 580, 592, 1114, 1141, 1414, 1422
BstX2I RGATCY 1 cut(s) 1348
BstXI CCANNNNNNTGG 1 cut(s) 223
BstYI RGATCY 1 cut(s) 1348
BsuRI GGCC 4 cut(s) 161, 819, 1032, 1455
BtsCI GGATG 1 cut(s) 493
BtsI GCAGTG 2 cut(s) 768, 1426
BtsIMutI CAGTG 3 cut(s) 768, 1185, 1426
BveI ACCTGC 1 cut(s) 787
Cac8I GCNNGC 3 cut(s) 1040, 1125, 1453
Cfr13I GGNCC 3 cut(s) 352, 1030, 1408
Cfr9I CCCGGG 1 cut(s) 1490
CseI GACGC 1 cut(s) 998
Csp6I GTAC 2 cut(s) 836, 1302
CviAII CATG 4 cut(s) 134, 478, 1039, 1069
CviQI GTAC 2 cut(s) 836, 1302
DdeI CTNAG 8 cut(s) 150, 867, 1034, 1113, 1188, 1218, 1356, 1431
DpnI GATC 2 cut(s) 330, 1350
DpnII GATC 2 cut(s) 328, 1348
EaeI YGGCCR 1 cut(s) 1453
Eam1104I CTCTTC 2 cut(s) 477, 1167
EarI CTCTTC 2 cut(s) 477, 1167
Ecl136II GAGCTC 1 cut(s) 866
Eco130I CCWWGG 1 cut(s) 156
Eco147I AGGCCT 1 cut(s) 161
Eco24I GRGCYC 1 cut(s) 868
Eco47I GGWCC 2 cut(s) 352, 1408
Eco53kI GAGCTC 1 cut(s) 866
Eco88I CYCGRG 1 cut(s) 1490
Eco91I GGTNACC 1 cut(s) 365
EcoICRI GAGCTC 1 cut(s) 866
EcoNI CCTNNNNNAGG 2 cut(s) 359, 953
EcoO65I GGTNACC 1 cut(s) 365
EcoRII CCWGG 3 cut(s) 232, 937, 954
EcoT14I CCWWGG 1 cut(s) 156
EcoT22I ATGCAT 1 cut(s) 507
EcoT38I GRGCYC 1 cut(s) 868
ErhI CCWWGG 1 cut(s) 156
FaeI CATG 4 cut(s) 137, 481, 1042, 1072
FalI AAGNNNNNCTT 4 cut(s) 273, 305, 654, 686
FaqI GGGAC 3 cut(s) 736, 1258, 1326
FatI CATG 4 cut(s) 133, 477, 1038, 1068
Fnu4HI GCNGC 6 cut(s) 594, 606, 1128, 1155, 1403, 1436
FokI GGATG 1 cut(s) 500
FriOI GRGCYC 1 cut(s) 868
Fsp4HI GCNGC 6 cut(s) 594, 606, 1128, 1155, 1403, 1436
FspBI CTAG 3 cut(s) 204, 1124, 1289
GluI GCNGC 6 cut(s) 594, 606, 1128, 1155, 1403, 1436
GsuI CTGGAG 1 cut(s) 107
HaeIII GGCC 4 cut(s) 161, 819, 1032, 1455
HapII CCGG 1 cut(s) 1491
HgaI GACGC 1 cut(s) 998
Hin1II CATG 4 cut(s) 137, 481, 1042, 1072
HindIII AAGCTT 1 cut(s) 1196
HinfI GANTC 3 cut(s) 269, 1393, 1507
HpaII CCGG 1 cut(s) 1491
HphI GGTGA 1 cut(s) 943
Hpy166II GTNNAC 3 cut(s) 11, 475, 668
Hpy188I TCNGA 9 cut(s) 153, 333, 511, 565, 870, 907, 1014, 1341, 1390
Hpy188III TCNNGA 4 cut(s) 97, 923, 998, 1208
Hpy8I GTNNAC 3 cut(s) 11, 475, 668
Hpy99I CGWCG 2 cut(s) 518, 1014
HpyCH4III ACNGT 3 cut(s) 717, 877, 1306
HpyF10VI GCNNNNNNNGC 3 cut(s) 602, 758, 1124
HpyF3I CTNAG 8 cut(s) 150, 867, 1034, 1113, 1188, 1218, 1356, 1431
Hsp92II CATG 4 cut(s) 137, 481, 1042, 1072
Kzo9I GATC 2 cut(s) 328, 1348
LmnI GCTCC 1 cut(s) 863
Lsp1109I GCAGC 6 cut(s) 580, 592, 1114, 1141, 1414, 1422
LweI GCATC 2 cut(s) 478, 492
MaeI CTAG 3 cut(s) 204, 1124, 1289
MaeIII GTNAC 3 cut(s) 365, 521, 877
MalI GATC 2 cut(s) 330, 1350
MboI GATC 2 cut(s) 328, 1348
MboII GAAGA 7 cut(s) 494, 797, 869, 901, 1184, 1270, 1334
MfeI CAATTG 4 cut(s) 298, 393, 702, 774
MflI RGATCY 1 cut(s) 1348
MhlI GDGCHC 2 cut(s) 546, 868
MlsI TGGCCA 1 cut(s) 1455
MluNI TGGCCA 1 cut(s) 1455
MlyI GAGTC 1 cut(s) 278
MmeI TCCRAC 2 cut(s) 265, 992
Mox20I TGGCCA 1 cut(s) 1455
Mph1103I ATGCAT 1 cut(s) 507
MscI TGGCCA 1 cut(s) 1455
MseI TTAA 5 cut(s) 42, 258, 1101, 1223, 1523
MslI CAYNNNNRTG 2 cut(s) 221, 850
Msp20I TGGCCA 1 cut(s) 1455
MspA1I CMGCKG 1 cut(s) 1405
MspI CCGG 1 cut(s) 1491
MspR9I CCNGG 5 cut(s) 234, 939, 956, 1491, 1492
MunI CAATTG 4 cut(s) 298, 393, 702, 774
Mva1269I GAATGC 1 cut(s) 505
MvaI CCWGG 3 cut(s) 234, 939, 956
MvnI CGCG 1 cut(s) 350
MwoI GCNNNNNNNGC 3 cut(s) 602, 758, 1124
NciI CCSGG 2 cut(s) 1491, 1492
NdeII GATC 2 cut(s) 328, 1348
NheI GCTAGC 1 cut(s) 1123
NlaIII CATG 4 cut(s) 137, 481, 1042, 1072
NlaIV GGNNCC 1 cut(s) 543
NsiI ATGCAT 1 cut(s) 507
NspI RCATGY 1 cut(s) 1042
PaeI GCATGC 1 cut(s) 1042
PaqCI CACCTGC 1 cut(s) 787
PceI AGGCCT 1 cut(s) 161
PctI GAATGC 1 cut(s) 505
PfeI GAWTC 2 cut(s) 1393, 1507
PfoI TCCNGGA 1 cut(s) 937
PkrI GCNGC 6 cut(s) 595, 607, 1129, 1156, 1404, 1437
PleI GAGTC 1 cut(s) 277
PpsI GAGTC 1 cut(s) 277
PsiI TTATAA 1 cut(s) 180
Psp124BI GAGCTC 1 cut(s) 868
Psp6I CCWGG 3 cut(s) 232, 937, 954
PspEI GGTNACC 1 cut(s) 365
PspGI CCWGG 3 cut(s) 232, 937, 954
PspN4I GGNNCC 1 cut(s) 543
PspPI GGNCC 3 cut(s) 352, 1030, 1408
PstI CTGCAG 2 cut(s) 598, 610
PsuI RGATCY 1 cut(s) 1348
PvuII CAGCTG 1 cut(s) 1405
RsaI GTAC 2 cut(s) 837, 1303
RsaNI GTAC 2 cut(s) 836, 1302
RseI CAYNNNNRTG 2 cut(s) 221, 850
SacI GAGCTC 1 cut(s) 868
SaqAI TTAA 5 cut(s) 42, 258, 1101, 1223, 1523
SatI GCNGC 6 cut(s) 594, 606, 1128, 1155, 1403, 1436
Sau3AI GATC 2 cut(s) 328, 1348
Sau96I GGNCC 3 cut(s) 352, 1030, 1408
SchI GAGTC 1 cut(s) 278
ScrFI CCNGG 5 cut(s) 234, 939, 956, 1491, 1492
SduI GDGCHC 2 cut(s) 546, 868
SfaNI GCATC 2 cut(s) 478, 492
SfcI CTRYAG 3 cut(s) 166, 594, 606
SinI GGWCC 2 cut(s) 352, 1408
SmaI CCCGGG 1 cut(s) 1492
SmiMI CAYNNNNRTG 2 cut(s) 221, 850
SmlI CTYRAG 2 cut(s) 551, 1206
SmoI CTYRAG 2 cut(s) 551, 1206
SpeI ACTAGT 1 cut(s) 203
SphI GCATGC 1 cut(s) 1042
SseBI AGGCCT 1 cut(s) 161
SsiI CCGC 1 cut(s) 350
SspMI CTAG 3 cut(s) 204, 1124, 1289
SstI GAGCTC 1 cut(s) 868
StuI AGGCCT 1 cut(s) 161
StyD4I CCNGG 5 cut(s) 232, 937, 954, 1489, 1490
StyI CCWWGG 1 cut(s) 156
TaaI ACNGT 3 cut(s) 717, 877, 1306
TaqI TCGA 5 cut(s) 98, 126, 320, 697, 791
TatI WGTACW 1 cut(s) 835
TfiI GAWTC 2 cut(s) 1393, 1507
Tru1I TTAA 5 cut(s) 42, 258, 1101, 1223, 1523
Tru9I TTAA 5 cut(s) 42, 258, 1101, 1223, 1523
TscAI CASTG 3 cut(s) 768, 1192, 1426
TseI GCWGC 6 cut(s) 593, 605, 1127, 1154, 1402, 1435
TspGWI ACGGA 1 cut(s) 531
TspMI CCCGGG 1 cut(s) 1490
TspRI CASTG 3 cut(s) 768, 1192, 1426
VpaK11BI GGWCC 2 cut(s) 352, 1408
XagI CCTNNNNNAGG 2 cut(s) 359, 953
XapI RAATTY 3 cut(s) 742, 786, 1082
XceI RCATGY 1 cut(s) 1042
XcmI CCANNNNNNNNNTGG 1 cut(s) 1418
XmaI CCCGGG 1 cut(s) 1490
XspI CTAG 3 cut(s) 204, 1124, 1289
Zsp2I ATGCAT 1 cut(s) 507
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.