RLG00000003518

Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln)

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
49559282 .. 49563854
4573 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003518

Sequence Viewer

Length: 1458 bp
ATGAGAAGTCAACAAACCCAGACAGCCACCCAAGTGAAAGTTTCTAACTTGAACCCGAATAAGAAGCTGGAGAATATCTCGAAGGACTATGAAGCAGTCATAGGTATCGAAACTCATGTCCAGCTATCTACTCAGACCAAGGCCTTTTGTAGTTGCCCTTATAATTACGGCTCTCAACCAAACACTAGTATTTGCCCCATTTGTATGGGTCTGCCTGGTGCTTTACCGATTTTGAACTTTAAGGTCATTGAGTCTGCTGTGAAAGTTGGGCTTGCACTCAATTGCAAATTGGCAATGAACTCGAAGTTTGATAGGAAACAATACTTTTACGCGGACCTTCCAAAGGGGTACCAAATATCCCAGTTTGATGTTCCAATTGCGACCGGTGGCTACATTGATTTGGATATTCCAGTAGAGTTTGGTGGTGGGCATAGGAAGTTTGGCATTACAAGAGTTCACATGGAAGAGGATGCAGGGAAGCTGATGCATTCAGACGATGGAAGTTACTCACAGGAAAGTACATGTCACTTTGTTGATCTAAATAGAGCGGGTGTGCCCTTGCTTGAGATTGTTTCTGAACCTGATATGAGAAATGGTATTGAAGCTGCAGAATATGCTGCAGAAATACAGAGGGTGGTTCGGTATTTGGGAGTGAGTAATGGCAATATGCAAGAAGGTTCACTTCGTTGTGATGTCAATGTTTCTATTCGACCAATTGGGCAATTACAGTTTGGGACGAAGGTGGAGATAAAAAATTTGAACGCTTTTTCGGCAGTGAGCAGGGCAATTGACTATGAAATTTCGAGGCAGGTGCTTCTTCATAGTCAAGGCCAAGACAAAGAAATCGTACAGGAAACACGACTATGGGACGAAGGAGCTCAGAAAACAGTTACAATGAGGAAGAAAGAAGGACTATCTGATTACCGATACTTTCCCGAACCAGACCTTCCAGGAGTTTTCCTCACCCAGGACTATGTTGATGGTATTCATAACTCTTTGCCTGAACTTCCAGAAATGAAGCGTCGAAGGTATGAAAAGATGGGCCTAAGCATGCAGGACATTCTTTTCCTTGCTAATGACATGAATACCTTAGAGTTGTCCATCAATGAGGTCAAGCTTTCCCCCCAAGAGTTGGCTGAGTTAATAGCTTTCAAAAAAGATGGGACTATTAGTGGGAAGATAGGGAAACAGATATTGTTTGAGCTACTAGCAAAAGGTGGTACTGTGAAGGGACTGATAGAAGAAAAAGATTTAGTTCAGATTGTAGATCCCGCTGAGATTGAGAAAATGGTGGAAAAGGTGTTGTCAGAGAATCCAAAGCAGCTGGACCAATATGGTGGTGGAAAGACTAAGCTGCAAGGTTATTTTGCTGGCCAGATAATGAAACTATCGAAAGGAAAAGCAAATCCAGGGCTTCTAAACAAGATTCTGTTAGAGAAATTAAATGCCAAAAGCTGA

Protein Analysis

486

Amino Acids

53.98

Weight (kDa)

6.25

Isoelectric Point (pI)

40.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GatB_N PF02934 33 - 326 7.1e-115 GatB/GatE catalytic domain
GatB_Yqey PF02637 357 - 481 9.4e-39 GatB domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 162
AarI CACCTGC 1 cut(s) 799
Acc36I ACCTGC 1 cut(s) 799
Acc65I GGTACC 1 cut(s) 348
AccB1I GGYRCC 1 cut(s) 348
AccB7I CCANNNNNTGG 1 cut(s) 1132
AccBSI CCGCTC 1 cut(s) 548
AccII CGCG 1 cut(s) 332
AciI CCGC 3 cut(s) 332, 548, 1272
AclWI GGATC 1 cut(s) 1262
AcoI YGGCCR 1 cut(s) 1372
AcsI RAATTY 2 cut(s) 754, 798
AfaI GTAC 4 cut(s) 350, 520, 849, 1222
AfiI CCNNNNNNNGG 3 cut(s) 343, 967, 1132
AflIII ACRYGT 1 cut(s) 521
AgeI ACCGGT 1 cut(s) 383
AgsI TTSAA 5 cut(s) 52, 235, 602, 760, 1153
AhlI ACTAGT 1 cut(s) 185
AjnI CCWGG 4 cut(s) 214, 949, 966, 1408
AleI CACNNNNGTG 1 cut(s) 32
Alw21I GWGCWC 1 cut(s) 880
AlwI GGATC 1 cut(s) 1262
AoxI GGCC 4 cut(s) 141, 829, 1042, 1372
ApeKI GCWGC 4 cut(s) 605, 617, 1321, 1354
ApoI RAATTY 2 cut(s) 754, 798
ArsI GACNNNNNNTTYG 2 cut(s) 102, 134
AsiGI ACCGGT 1 cut(s) 383
Asp718I GGTACC 1 cut(s) 348
AspS9I GGNCC 3 cut(s) 334, 1042, 1327
AsuHPI GGTGA 1 cut(s) 955
AvaII GGWCC 2 cut(s) 334, 1327
BaeGI GKGCMC 1 cut(s) 558
BalI TGGCCA 1 cut(s) 1374
BanI GGYRCC 1 cut(s) 348
BanII GRGCYC 1 cut(s) 880
Bbv12I GWGCWC 1 cut(s) 880
BbvI GCAGC 4 cut(s) 592, 604, 1333, 1341
BccI CCATC 5 cut(s) 491, 974, 1033, 1109, 1154
BceAI ACGGC 1 cut(s) 184
BcgI CGANNNNNNTGC 4 cut(s) 282, 316, 793, 827
BciT130I CCWGG 4 cut(s) 216, 951, 968, 1410
BcuI ACTAGT 1 cut(s) 185
BfaI CTAG 2 cut(s) 186, 1208
BfmI CTRYAG 2 cut(s) 606, 618
BfuAI ACCTGC 1 cut(s) 799
BisI GCNGC 4 cut(s) 606, 618, 1322, 1355
BlsI GCNGC 4 cut(s) 607, 619, 1323, 1356
Bme1390I CCNGG 4 cut(s) 216, 951, 968, 1410
Bme18I GGWCC 2 cut(s) 334, 1327
BmgT120I GGNCC 3 cut(s) 334, 1042, 1327
BmiI GGNNCC 1 cut(s) 350
BmrFI CCNGG 4 cut(s) 216, 951, 968, 1410
BmrI ACTGGG 1 cut(s) 355
BmsI GCATC 2 cut(s) 460, 474
BmuI ACTGGG 1 cut(s) 355
BplI GAGNNNNNCTC 4 cut(s) 62, 94, 945, 977
BpmI CTGGAG 1 cut(s) 89
Bpu10I CCTNAGC 1 cut(s) 1046
BpuEI CTTGAG 1 cut(s) 584
BsaJI CCNNGG 3 cut(s) 138, 966, 1409
BsaWI WCCGGW 1 cut(s) 383
Bsc4I CCNNNNNNNGG 3 cut(s) 343, 967, 1132
Bse118I RCCGGY 1 cut(s) 383
Bse1I ACTGG 2 cut(s) 361, 410
Bse3DI GCAATG 1 cut(s) 300
BseBI CCWGG 4 cut(s) 216, 951, 968, 1410
BseDI CCNNGG 3 cut(s) 138, 966, 1409
BseGI GGATG 1 cut(s) 475
BseLI CCNNNNNNNGG 3 cut(s) 343, 967, 1132
BseMI GCAATG 1 cut(s) 300
BseMII CTCAG 4 cut(s) 146, 893, 1128, 1266
BseNI ACTGG 2 cut(s) 361, 410
BseSI GKGCMC 1 cut(s) 558
BseXI GCAGC 4 cut(s) 592, 604, 1333, 1341
Bsh1236I CGCG 1 cut(s) 332
Bsh1285I CGRYCG 1 cut(s) 384
BshFI GGCC 4 cut(s) 143, 831, 1044, 1374
BshNI GGYRCC 1 cut(s) 348
BshTI ACCGGT 1 cut(s) 383
BsiEI CGRYCG 1 cut(s) 384
BsiHKAI GWGCWC 1 cut(s) 880
BsiSI CCGG 1 cut(s) 384
BslFI GGGAC 4 cut(s) 748, 881, 1177, 1245
BslI CCNNNNNNNGG 3 cut(s) 343, 967, 1132
BsmFI GGGAC 4 cut(s) 748, 881, 1177, 1245
BsmI GAATGC 1 cut(s) 487
BsnI GGCC 4 cut(s) 143, 831, 1044, 1374
Bsp1286I GDGCHC 2 cut(s) 558, 880
Bsp143I GATC 2 cut(s) 535, 1267
BspACI CCGC 3 cut(s) 332, 548, 1272
BspANI GGCC 4 cut(s) 143, 831, 1044, 1374
BspCNI CTCAG 4 cut(s) 145, 892, 1129, 1267
BspFNI CGCG 1 cut(s) 332
BspLI GGNNCC 1 cut(s) 350
BspMAI CTGCAG 2 cut(s) 610, 622
BspMI ACCTGC 1 cut(s) 799
BspPI GGATC 1 cut(s) 1262
BspT107I GGYRCC 1 cut(s) 348
BsrBI CCGCTC 1 cut(s) 548
BsrDI GCAATG 1 cut(s) 300
BsrFI RCCGGY 1 cut(s) 383
BsrI ACTGG 2 cut(s) 361, 410
BssAI RCCGGY 1 cut(s) 383
BssECI CCNNGG 3 cut(s) 138, 966, 1409
BssMI GATC 2 cut(s) 535, 1267
BssT1I CCWWGG 1 cut(s) 138
Bst2UI CCWGG 4 cut(s) 216, 951, 968, 1410
Bst4CI ACNGT 3 cut(s) 729, 889, 1225
Bst6I CTCTTC 1 cut(s) 459
BstAPI GCANNNNNTGC 1 cut(s) 614
BstC8I GCNNGC 3 cut(s) 273, 1052, 1372
BstDEI CTNAG 7 cut(s) 132, 879, 1046, 1090, 1137, 1275, 1350
BstENI CCTNNNNNAGG 2 cut(s) 341, 965
BstF5I GGATG 1 cut(s) 475
BstFNI CGCG 1 cut(s) 332
BstKTI GATC 2 cut(s) 538, 1270
BstMBI GATC 2 cut(s) 535, 1267
BstMCI CGRYCG 1 cut(s) 384
BstMWI GCNNNNNNNGC 2 cut(s) 614, 770
BstNI CCWGG 4 cut(s) 216, 951, 968, 1410
BstNSI RCATGY 2 cut(s) 525, 1054
BstSCI CCNGG 4 cut(s) 214, 949, 966, 1408
BstSFI CTRYAG 2 cut(s) 606, 618
BstSLI GKGCMC 1 cut(s) 558
BstUI CGCG 1 cut(s) 332
BstV1I GCAGC 4 cut(s) 592, 604, 1333, 1341
BstX2I RGATCY 1 cut(s) 1267
BstXI CCANNNNNNTGG 2 cut(s) 205, 1337
BstYI RGATCY 1 cut(s) 1267
BsuRI GGCC 4 cut(s) 143, 831, 1044, 1374
BtsCI GGATG 1 cut(s) 475
BtsI GCAGTG 1 cut(s) 780
BtsIMutI CAGTG 1 cut(s) 780
BveI ACCTGC 1 cut(s) 799
Cac8I GCNNGC 3 cut(s) 273, 1052, 1372
Cfr10I RCCGGY 1 cut(s) 383
Cfr13I GGNCC 3 cut(s) 334, 1042, 1327
CseI GACGC 1 cut(s) 1010
Csp6I GTAC 4 cut(s) 349, 519, 848, 1221
CspAI ACCGGT 1 cut(s) 383
CviAII CATG 5 cut(s) 116, 460, 522, 1051, 1081
CviQI GTAC 4 cut(s) 349, 519, 848, 1221
DdeI CTNAG 7 cut(s) 132, 879, 1046, 1090, 1137, 1275, 1350
DpnI GATC 2 cut(s) 537, 1269
DpnII GATC 2 cut(s) 535, 1267
EaeI YGGCCR 1 cut(s) 1372
Eam1104I CTCTTC 1 cut(s) 459
EarI CTCTTC 1 cut(s) 459
Ecl136II GAGCTC 1 cut(s) 878
Eco130I CCWWGG 1 cut(s) 138
Eco147I AGGCCT 1 cut(s) 143
Eco24I GRGCYC 1 cut(s) 880
Eco47I GGWCC 2 cut(s) 334, 1327
Eco53kI GAGCTC 1 cut(s) 878
EcoICRI GAGCTC 1 cut(s) 878
EcoNI CCTNNNNNAGG 2 cut(s) 341, 965
EcoRII CCWGG 4 cut(s) 214, 949, 966, 1408
EcoT14I CCWWGG 1 cut(s) 138
EcoT22I ATGCAT 1 cut(s) 489
EcoT38I GRGCYC 1 cut(s) 880
ErhI CCWWGG 1 cut(s) 138
FaeI CATG 5 cut(s) 119, 463, 525, 1054, 1084
FalI AAGNNNNNCTT 4 cut(s) 255, 287, 666, 698
FaqI GGGAC 4 cut(s) 748, 881, 1177, 1245
FatI CATG 5 cut(s) 115, 459, 521, 1050, 1080
FauI CCCGC 2 cut(s) 541, 1279
Fnu4HI GCNGC 4 cut(s) 606, 618, 1322, 1355
FokI GGATG 1 cut(s) 482
FriOI GRGCYC 1 cut(s) 880
Fsp4HI GCNGC 4 cut(s) 606, 618, 1322, 1355
FspBI CTAG 2 cut(s) 186, 1208
GluI GCNGC 4 cut(s) 606, 618, 1322, 1355
GsuI CTGGAG 1 cut(s) 89
HaeIII GGCC 4 cut(s) 143, 831, 1044, 1374
HapII CCGG 1 cut(s) 384
HgaI GACGC 1 cut(s) 1010
Hin1II CATG 5 cut(s) 119, 463, 525, 1054, 1084
HincII GTYRAC 1 cut(s) 11
HindII GTYRAC 1 cut(s) 11
HindIII AAGCTT 1 cut(s) 1115
HinfI GANTC 3 cut(s) 251, 1312, 1426
HpaII CCGG 1 cut(s) 384
HphI GGTGA 1 cut(s) 955
Hpy166II GTNNAC 3 cut(s) 11, 457, 680
Hpy188I TCNGA 7 cut(s) 135, 493, 577, 882, 919, 1260, 1309
Hpy188III TCNNGA 3 cut(s) 79, 935, 1010
Hpy8I GTNNAC 3 cut(s) 11, 457, 680
Hpy99I CGWCG 1 cut(s) 1026
HpyAV CCTTC 9 cut(s) 76, 347, 668, 733, 866, 902, 956, 1020, 1222
HpyCH4III ACNGT 3 cut(s) 729, 889, 1225
HpyCH4V TGCA 9 cut(s) 275, 285, 473, 487, 608, 620, 670, 1054, 1357
HpyF10VI GCNNNNNNNGC 2 cut(s) 614, 770
HpyF3I CTNAG 7 cut(s) 132, 879, 1046, 1090, 1137, 1275, 1350
Hsp92II CATG 5 cut(s) 119, 463, 525, 1054, 1084
KpnI GGTACC 1 cut(s) 352
Kzo9I GATC 2 cut(s) 535, 1267
LmnI GCTCC 1 cut(s) 875
Lsp1109I GCAGC 4 cut(s) 592, 604, 1333, 1341
LweI GCATC 2 cut(s) 460, 474
MaeI CTAG 2 cut(s) 186, 1208
MaeIII GTNAC 3 cut(s) 503, 524, 889
MalI GATC 2 cut(s) 537, 1269
MbiI CCGCTC 1 cut(s) 548
MboI GATC 2 cut(s) 535, 1267
MboII GAAGA 5 cut(s) 476, 809, 913, 1189, 1253
MfeI CAATTG 4 cut(s) 280, 375, 714, 786
MflI RGATCY 1 cut(s) 1267
MhlI GDGCHC 2 cut(s) 558, 880
MlsI TGGCCA 1 cut(s) 1374
MluNI TGGCCA 1 cut(s) 1374
MlyI GAGTC 1 cut(s) 260
MnlI CCTC 6 cut(s) 460, 624, 798, 891, 971, 1102
Mox20I TGGCCA 1 cut(s) 1374
Mph1103I ATGCAT 1 cut(s) 489
MscI TGGCCA 1 cut(s) 1374
MseI TTAA 3 cut(s) 240, 1142, 1442
MslI CAYNNNNRTG 3 cut(s) 32, 203, 862
Msp20I TGGCCA 1 cut(s) 1374
MspA1I CMGCKG 2 cut(s) 1274, 1324
MspI CCGG 1 cut(s) 384
MspR9I CCNGG 4 cut(s) 216, 951, 968, 1410
MunI CAATTG 4 cut(s) 280, 375, 714, 786
Mva1269I GAATGC 1 cut(s) 487
MvaI CCWGG 4 cut(s) 216, 951, 968, 1410
MvnI CGCG 1 cut(s) 332
MwoI GCNNNNNNNGC 2 cut(s) 614, 770
NdeII GATC 2 cut(s) 535, 1267
NlaIII CATG 5 cut(s) 119, 463, 525, 1054, 1084
NlaIV GGNNCC 1 cut(s) 350
NmuCI GTSAC 1 cut(s) 524
NsiI ATGCAT 1 cut(s) 489
NspI RCATGY 2 cut(s) 525, 1054
OliI CACNNNNGTG 1 cut(s) 32
PaeI GCATGC 1 cut(s) 1054
PaqCI CACCTGC 1 cut(s) 799
PceI AGGCCT 1 cut(s) 143
PciI ACATGT 1 cut(s) 521
PctI GAATGC 1 cut(s) 487
PfeI GAWTC 2 cut(s) 1312, 1426
PflMI CCANNNNNTGG 1 cut(s) 1132
PfoI TCCNGGA 1 cut(s) 949
PinAI ACCGGT 1 cut(s) 383
PkrI GCNGC 4 cut(s) 607, 619, 1323, 1356
PleI GAGTC 1 cut(s) 259
PpsI GAGTC 1 cut(s) 259
PscI ACATGT 1 cut(s) 521
PsiI TTATAA 1 cut(s) 162
Psp124BI GAGCTC 1 cut(s) 880
Psp6I CCWGG 4 cut(s) 214, 949, 966, 1408
PspGI CCWGG 4 cut(s) 214, 949, 966, 1408
PspN4I GGNNCC 1 cut(s) 350
PspPI GGNCC 3 cut(s) 334, 1042, 1327
PstI CTGCAG 2 cut(s) 610, 622
PsuI RGATCY 1 cut(s) 1267
PvuII CAGCTG 1 cut(s) 1324
RsaI GTAC 4 cut(s) 350, 520, 849, 1222
RsaNI GTAC 4 cut(s) 349, 519, 848, 1221
RseI CAYNNNNRTG 3 cut(s) 32, 203, 862
SacI GAGCTC 1 cut(s) 880
SaqAI TTAA 3 cut(s) 240, 1142, 1442
SatI GCNGC 4 cut(s) 606, 618, 1322, 1355
Sau3AI GATC 2 cut(s) 535, 1267
Sau96I GGNCC 3 cut(s) 334, 1042, 1327
SchI GAGTC 1 cut(s) 260
ScrFI CCNGG 4 cut(s) 216, 951, 968, 1410
SduI GDGCHC 2 cut(s) 558, 880
SfaNI GCATC 2 cut(s) 460, 474
SfcI CTRYAG 2 cut(s) 606, 618
SinI GGWCC 2 cut(s) 334, 1327
SmiMI CAYNNNNRTG 3 cut(s) 32, 203, 862
SmlI CTYRAG 1 cut(s) 563
SmoI CTYRAG 1 cut(s) 563
SpeI ACTAGT 1 cut(s) 185
SphI GCATGC 1 cut(s) 1054
SseBI AGGCCT 1 cut(s) 143
SsiI CCGC 3 cut(s) 332, 548, 1272
SspMI CTAG 2 cut(s) 186, 1208
SstI GAGCTC 1 cut(s) 880
StuI AGGCCT 1 cut(s) 143
StyD4I CCNGG 4 cut(s) 214, 949, 966, 1408
StyI CCWWGG 1 cut(s) 138
TaaI ACNGT 3 cut(s) 729, 889, 1225
TaqI TCGA 7 cut(s) 80, 108, 302, 709, 803, 1024, 1391
TatI WGTACW 1 cut(s) 518
TfiI GAWTC 2 cut(s) 1312, 1426
Tru1I TTAA 3 cut(s) 240, 1142, 1442
Tru9I TTAA 3 cut(s) 240, 1142, 1442
TscAI CASTG 1 cut(s) 780
TseFI GTSAC 1 cut(s) 524
TseI GCWGC 4 cut(s) 605, 617, 1321, 1354
Tsp45I GTSAC 1 cut(s) 524
TspDTI ATGAA 9 cut(s) 105, 311, 809, 810, 977, 1031, 1047, 1097, 1397
TspRI CASTG 1 cut(s) 780
Van91I CCANNNNNTGG 1 cut(s) 1132
VpaK11BI GGWCC 2 cut(s) 334, 1327
XagI CCTNNNNNAGG 2 cut(s) 341, 965
XapI RAATTY 2 cut(s) 754, 798
XceI RCATGY 2 cut(s) 525, 1054
XcmI CCANNNNNNNNNTGG 1 cut(s) 1337
XspI CTAG 2 cut(s) 186, 1208
Zsp2I ATGCAT 1 cut(s) 489
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.