Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G57250 |
| fragaria_vesca | FvH4_4g07420 |
| malus_domestica | MD13G1243700.v1.1 MD16G1250300.v1.1 MD16G1250400.v1.1 MD16G1250500.v1.1 MD16G1250600.v1.1 |
| prunus_persica | Prupe.1G077100_v2.0.a1 |
| pyrus_communis | pycom13g21510 pycom16g21000 |
| rosa_chinensis | RchiOBHm_Chr2g0131261 RchiOBHm_Chr4g0399881 |
| rosa_laevigata | RLG00000009236 |
| rosa_multiflora | Rmu_sc0014676.1_g000003 |
| rosa_roxburghii | Rroxscaffold_5G00344750 |
| rosa_rugosa | Rorug04G0019700 |
| rosa_samantha | Rh2BG356200 Rh4AG096800 Rh4BG094300 Rh4CG105900 Rh4DG089200 Rh4DG091000 |
| rosa_wichuraiana | Rw4G008000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 311 |
| AfaI | GTAC | 1 cut(s) | 229 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 161, 446 |
| AgsI | TTSAA | 2 cut(s) | 240, 393 |
| AluBI | AGCT | 3 cut(s) | 28, 280, 421 |
| AluI | AGCT | 3 cut(s) | 28, 280, 421 |
| Alw26I | GTCTC | 2 cut(s) | 50, 345 |
| AoxI | GGCC | 2 cut(s) | 100, 453 |
| AseI | ATTAAT | 1 cut(s) | 378 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 75 |
| AspS9I | GGNCC | 1 cut(s) | 453 |
| AsuHPI | GGTGA | 2 cut(s) | 159, 170 |
| AsuNHI | GCTAGC | 2 cut(s) | 413, 421 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 219, 252 |
| BccI | CCATC | 2 cut(s) | 317, 427 |
| BceAI | ACGGC | 1 cut(s) | 87 |
| BcoDI | GTCTC | 2 cut(s) | 50, 345 |
| BfaI | CTAG | 3 cut(s) | 197, 414, 422 |
| BmgT120I | GGNCC | 1 cut(s) | 453 |
| BmiI | GGNNCC | 1 cut(s) | 438 |
| BmsI | GCATC | 1 cut(s) | 250 |
| BmtI | GCTAGC | 2 cut(s) | 417, 425 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 325, 357 |
| BsaI | GGTCTC | 1 cut(s) | 345 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 323, 353 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 161, 446 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 161, 446 |
| BseMII | CTCAG | 1 cut(s) | 356 |
| BshFI | GGCC | 2 cut(s) | 102, 455 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 161, 446 |
| BsmAI | GTCTC | 2 cut(s) | 50, 345 |
| BsnI | GGCC | 2 cut(s) | 102, 455 |
| Bso31I | GGTCTC | 1 cut(s) | 345 |
| BspACI | CCGC | 1 cut(s) | 311 |
| BspANI | GGCC | 2 cut(s) | 102, 455 |
| BspCNI | CTCAG | 1 cut(s) | 355 |
| BspLI | GGNNCC | 1 cut(s) | 438 |
| BspOI | GCTAGC | 2 cut(s) | 417, 425 |
| BspTNI | GGTCTC | 1 cut(s) | 345 |
| Bst4CI | ACNGT | 2 cut(s) | 124, 232 |
| BstC8I | GCNNGC | 3 cut(s) | 415, 419, 423 |
| BstDEI | CTNAG | 2 cut(s) | 342, 459 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 159 |
| BstMAI | GTCTC | 2 cut(s) | 50, 345 |
| BstNSI | RCATGY | 1 cut(s) | 148 |
| BsuRI | GGCC | 2 cut(s) | 102, 455 |
| Cac8I | GCNNGC | 3 cut(s) | 415, 419, 423 |
| Cfr13I | GGNCC | 1 cut(s) | 453 |
| Csp6I | GTAC | 1 cut(s) | 228 |
| CviAII | CATG | 2 cut(s) | 145, 328 |
| CviJI | RGCY | 9 cut(s) | 28, 102, 205, 221, 280, 413, 417, 421, 455 |
| CviKI_1 | RGCY | 9 cut(s) | 28, 102, 205, 221, 280, 413, 417, 421, 455 |
| CviQI | GTAC | 1 cut(s) | 228 |
| DdeI | CTNAG | 2 cut(s) | 342, 459 |
| EciI | GGCGGA | 1 cut(s) | 326 |
| Eco31I | GGTCTC | 1 cut(s) | 345 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 159 |
| FaeI | CATG | 2 cut(s) | 148, 331 |
| FaiI | YATR | 7 cut(s) | 146, 192, 210, 321, 329, 369, 383 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 63, 95 |
| FatI | CATG | 2 cut(s) | 144, 327 |
| FspBI | CTAG | 3 cut(s) | 197, 414, 422 |
| HaeIII | GGCC | 2 cut(s) | 102, 455 |
| Hin1II | CATG | 2 cut(s) | 148, 331 |
| HinfI | GANTC | 1 cut(s) | 62 |
| HphI | GGTGA | 2 cut(s) | 159, 170 |
| Hpy166II | GTNNAC | 2 cut(s) | 95, 167 |
| Hpy188I | TCNGA | 1 cut(s) | 286 |
| Hpy8I | GTNNAC | 2 cut(s) | 95, 167 |
| HpyAV | CCTTC | 3 cut(s) | 65, 298, 330 |
| HpyCH4III | ACNGT | 2 cut(s) | 124, 232 |
| HpyCH4V | TGCA | 2 cut(s) | 144, 263 |
| HpyF3I | CTNAG | 2 cut(s) | 342, 459 |
| Hsp92II | CATG | 2 cut(s) | 148, 331 |
| LpnPI | CCDG | 5 cut(s) | 168, 199, 210, 431, 436 |
| LweI | GCATC | 1 cut(s) | 250 |
| MaeI | CTAG | 3 cut(s) | 197, 414, 422 |
| MaeIII | GTNAC | 1 cut(s) | 247 |
| MboII | GAAGA | 1 cut(s) | 304 |
| MluCI | AATT | 4 cut(s) | 135, 316, 375, 442 |
| MmeI | TCCRAC | 1 cut(s) | 249 |
| MnlI | CCTC | 3 cut(s) | 43, 155, 211 |
| MroXI | GAANNNNTTC | 1 cut(s) | 75 |
| MseI | TTAA | 2 cut(s) | 348, 378 |
| NheI | GCTAGC | 2 cut(s) | 413, 421 |
| NlaIII | CATG | 2 cut(s) | 148, 331 |
| NlaIV | GGNNCC | 1 cut(s) | 438 |
| NspI | RCATGY | 1 cut(s) | 148 |
| PdmI | GAANNNNTTC | 1 cut(s) | 75 |
| PfeI | GAWTC | 1 cut(s) | 62 |
| PshBI | ATTAAT | 1 cut(s) | 378 |
| PspN4I | GGNNCC | 1 cut(s) | 438 |
| PspPI | GGNCC | 1 cut(s) | 453 |
| RsaI | GTAC | 1 cut(s) | 229 |
| RsaNI | GTAC | 1 cut(s) | 228 |
| SaqAI | TTAA | 2 cut(s) | 348, 378 |
| Sau96I | GGNCC | 1 cut(s) | 453 |
| SetI | ASST | 9 cut(s) | 30, 54, 76, 166, 172, 282, 309, 341, 423 |
| SfaNI | GCATC | 1 cut(s) | 250 |
| Sse9I | AATT | 4 cut(s) | 135, 316, 375, 442 |
| SsiI | CCGC | 1 cut(s) | 311 |
| SspMI | CTAG | 3 cut(s) | 197, 414, 422 |
| TaaI | ACNGT | 2 cut(s) | 124, 232 |
| TaqI | TCGA | 1 cut(s) | 108 |
| TasI | AATT | 4 cut(s) | 135, 316, 375, 442 |
| TfiI | GAWTC | 1 cut(s) | 62 |
| Tru1I | TTAA | 2 cut(s) | 348, 378 |
| Tru9I | TTAA | 2 cut(s) | 348, 378 |
| TspDTI | ATGAA | 2 cut(s) | 147, 305 |
| TspGWI | ACGGA | 1 cut(s) | 116 |
| VspI | ATTAAT | 1 cut(s) | 378 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 159 |
| XceI | RCATGY | 1 cut(s) | 148 |
| XmnI | GAANNNNTTC | 1 cut(s) | 75 |
| XspI | CTAG | 3 cut(s) | 197, 414, 422 |