Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0014676.1

Orthogroup ID

OG0008661

Physical Location & Seq

Genomic Coordinates Reverse (-)

33577 .. 36870

Gene Structure 3294 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0014676.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3294 bp

atgcctaagctttcctctacactcttctacaccaaacccagccgagccttgtcttcatcttcatcttcttcttctcctcgtaacagtcttccaaaactcccacctcttcaaactttactcaaacgtggcttcactcccactctcaattccatcatccaattccttctctttctttcacatacccgcagattcaacacagtcatccacttcttctctcaaatggagtcgaaccaaatcaaaggcaactcccaaactcgctcaattctcacatgggctctccttaaactgcacaaatatgaagatgcagagcatttcatgaggacccagatggccaaagcttcaaattttccgaggaatcgcatgtgggacactctcattcaaggtctctgtatcaaccagaaaaacccagataaggctttgctggtattacgggattgcttgagaaaatatggtacctttccttcttctttcactttttgctcgttaatttatagatttagctctatgggggatatgagtaaggcaattgaggttgtggagttgatgacagatgagaaaatcaactacccatttaacaattttgtttgtagttcagtgatttctgggttttgtaaaattggaaagccagaaattgctgttgagttttttgagaatgccctaaagtctggagctttgcagcctaatgttgtggtatacacagcacttgtaggtgctctttgtaaattaggaagagttagtgaggtttgtgatttagtttgtaaaatggagaaggaaggattggcattcgatgttgttttctatagtagttggatttgtggttatatttcggaagggagtctaatggaggtgtttcggaagaagagacagatggtagataaaggcataagaccagatacagttagctatactatacttgtagatgggttttcgaagcttggagatgtggaaagggcaattggctttttgaaaaagatgaggaaaggtgggctagaacccagtttgattacttataccgccatcatgttgggattctgcgagaaaggaaaactggaggaggcatttgctatttacaagatggtcaaagatttggaaattgaagttgatgaatttatgtatgctactttaattcacgggttttgtatgagaggggatcttgatggtgtttttcgtctgctagatgaaatggaaaagaaggggattaatccaagcattgttacatataatacggtaattaatggattatgcaaatttgggaggactgcggaggctgagaagatctcaaagggcatatctggagataccattacatatagtacattgctacatgggtatattgaggaagaaaatacctctgggattttggaaaccaagaggagattggaggaagctggagtctttatggatgttgttatgtgtaatatacttattaaagcactattcatggtggggacatttgaggatgcttacatactgtacaagggaatgccagagaagggtttgactgcaaattccattacatactgtacaatgattgatgggtactgtaaagttggtagaattgatgaggcacttgagatatttgatgagttcagaaggacaccactttcctcagttgcatgttataattgtataataaattggctctgtaagcagggcatggtagatatggccacggaggtgtttattgaacttaatcagaaaagcttaactttggatgatggtatctgcaaaatgcttttgaaggcaacttttaaacaaaaaagtgcaactggagttttaaatttggttcacagagtggaaaatttgaggccaggtatgtatgatgttatgagcaatgttgcgatcagtttcttgtgcaagagagggtttcatgagtctgcatttgaagtgtatgcagtgatgaggagggaagggtcggttgcaacgagaaaaacttattattcaattttagaaggtctaattaatgatagaaaagagtggctaactctgcctcttttaaacatctttctaaaagaatatggactagttgaacctaaagtaagccagattcttgcttaccacatgtgcctgaaggatgtcaatgatgctttctgctttttagaaaagatcaaggacagacctacagccattaccttgcctatttctcttttcaagacacttatgaagaagggtaaagttttggttgcatatcagcttttcatggaggctgaagatagtgtacccgttctggatgcatttgattattcgcacatggttgatggcctttgcaagggtggatatatcagtgaggcactagatctctgtggttttgctaaatctaagggaatcaccctgaatattattgcttataattcagttataaatggattgtgccgccaaggtcatcttgttgatgcatttcggctatttgattcattagagagaattaatttggtaccctcagaaatcacttatactacattgattgattccctacgtagagaggggtttctgcttgatgcaaagcaattatttgaaagcatggtcctcaaggggtttaaaccgaatacacatgtatataactctattattgatggtttttgcaaaattggacatatggaggatgccttgaagcttctttgtgaattggacatgaaatctcttaggcctgatgaattcactgttactattgttatcaatggcttttgccaaaagggtgatatggaaggggctctaaatttcttcactgagttcaaaagaaatggtacatcacctgattttttgggtttcttaaatttgataagaggtttatgtgccaagggaaggatggaagaagccagaagtatcttgagagaaatgcttcagtctcagtctgtcctggagctaataaatagagttgatgttgagctggaaacagagtcattggaaagcttgcttgtttcactgtgcgagcaaggaagtatccaagaagcagtgactgtccttaatgaaatcgcttgcatgtttttccctgttcggagttcatctattgattgccatcaatctcataaactacagaagccttgtgacagcgaggatcctaaaacagttgcttcaaaatctgaaacttccatcaatgcagattcgggtattcagttttctggtcggaagaaagtagagaaggtggcaaaaacttgtgatgttatagggagtaggtctcagtttcatgactttgattattactataagcaaattgcttcactgtgttcgataggggagctacaaaaggctagtgaattagtaaaggaaatagtttctaatttgggcaagagttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

1097

Amino Acids

123.56

Weight (kDa)

7.14

Isoelectric Point (pI)

38.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008661)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57250
fragaria_vesca	FvH4_4g07420
malus_domestica	MD13G1243700.v1.1 MD16G1250300.v1.1 MD16G1250400.v1.1 MD16G1250500.v1.1 MD16G1250600.v1.1
prunus_persica	Prupe.1G077100_v2.0.a1
pyrus_communis	pycom13g21510 pycom16g21000
rosa_chinensis	RchiOBHm_Chr2g0131261 RchiOBHm_Chr4g0399881
rosa_laevigata	RLG00000009236
rosa_multiflora	Rmu_sc0014676.1_g000003
rosa_roxburghii	Rroxscaffold_5G00344750
rosa_rugosa	Rorug04G0019700
rosa_samantha	Rh2BG356200 Rh4AG096800 Rh4BG094300 Rh4CG105900 Rh4DG089200 Rh4DG091000
rosa_wichuraiana	Rw4G008000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	1623, 2349, 2360
Acc65I	GGTACC	2 cut(s)	452, 2434
AccB1I	GGYRCC	2 cut(s)	452, 2434
AccI	GTMKAC	1 cut(s)	693
AciI	CCGC	4 cut(s)	184, 1014, 1262, 2374
AclWI	GGATC	3 cut(s)	1158, 3050, 3063
AcoI	YGGCCR	2 cut(s)	330, 1668
AcsI	RAATTY	9 cut(s)	343, 1106, 1247, 1507, 1780, 1801, 2654, 2716, 2773
AcuI	CTGAAG	3 cut(s)	2090, 2229, 2825
AdeI	CACNNNGTG	1 cut(s)	1795
AfaI	GTAC	8 cut(s)	454, 1315, 1475, 1525, 1541, 2220, 2436, 2746
AfiI	CCNNNNNNNGG	4 cut(s)	412, 1493, 2269, 2802
AflIII	ACRYGT	2 cut(s)	2061, 2551
AhlI	ACTAGT	1 cut(s)	2023
AjnI	CCWGG	2 cut(s)	1810, 2856
AjuI	GAANNNNNNNTTGG	4 cut(s)	761, 793, 939, 971
AleI	CACNNNNGTG	1 cut(s)	1676
Alw21I	GWGCWC	1 cut(s)	715
Alw26I	GTCTC	4 cut(s)	389, 856, 2850, 3180
AlwI	GGATC	3 cut(s)	1158, 3050, 3063
AlwNI	CAGNNNCTG	1 cut(s)	2957
AoxI	GGCC	5 cut(s)	330, 1668, 1808, 2260, 2645
ApeKI	GCWGC	1 cut(s)	676
ApoI	RAATTY	9 cut(s)	343, 1106, 1247, 1507, 1780, 1801, 2654, 2716, 2773
AseI	ATTAAT	4 cut(s)	1200, 1233, 1962, 2427
Asp700I	GAANNNNTTC	1 cut(s)	2838
Asp718I	GGTACC	2 cut(s)	452, 2434
AspS9I	GGNCC	2 cut(s)	321, 2524
AsuHPI	GGTGA	3 cut(s)	2320, 2708, 2742
AsuII	TTCGAA	1 cut(s)	929
AvaII	GGWCC	2 cut(s)	321, 2524
BalI	TGGCCA	2 cut(s)	332, 1670
BamHI	GGATCC	1 cut(s)	3055
BanI	GGYRCC	2 cut(s)	452, 2434
BanII	GRGCYC	2 cut(s)	277, 2713
BarI	GAAGNNNNNNTAC	4 cut(s)	445, 477, 2202, 2234
BbsI	GAAGAC	2 cut(s)	45, 80
Bbv12I	GWGCWC	1 cut(s)	715
BbvI	GCAGC	1 cut(s)	688
BciT130I	CCWGG	2 cut(s)	1812, 2858
BciVI	GTATCC	1 cut(s)	2951
BcoDI	GTCTC	4 cut(s)	389, 856, 2850, 3180
BcuI	ACTAGT	1 cut(s)	2023
BfaI	CTAG	5 cut(s)	989, 1175, 2024, 2294, 3249
BfmI	CTRYAG	3 cut(s)	799, 2121, 3032
BfuI	GTATCC	1 cut(s)	2951
BglII	AGATCT	2 cut(s)	1275, 2296
BisI	GCNGC	2 cut(s)	677, 2374
BlsI	GCNGC	2 cut(s)	678, 2375
Bme1390I	CCNGG	2 cut(s)	1812, 2858
Bme18I	GGWCC	2 cut(s)	321, 2524
BmgT120I	GGNCC	2 cut(s)	321, 2524
BmiI	GGNNCC	4 cut(s)	323, 454, 2436, 3057
BmrFI	CCNGG	2 cut(s)	1812, 2858
BmrI	ACTGGG	1 cut(s)	990
BmsI	GCATC	7 cut(s)	292, 1450, 2074, 2221, 2383, 2488, 2593
BmuI	ACTGGG	1 cut(s)	990
BpiI	GAAGAC	2 cut(s)	45, 80
BplI	GAGNNNNNCTC	4 cut(s)	1262, 1294, 3160, 3192
BpmI	CTGGAG	6 cut(s)	687, 1070, 1314, 1410, 1791, 2879
Bpu10I	CCTNAGC	1 cut(s)	6
Bpu14I	TTCGAA	1 cut(s)	929
BpuEI	CTTGAG	4 cut(s)	460, 1592, 2513, 2848
BsaAI	YACGTR	1 cut(s)	2477
BsaBI	GATNNNNATC	1 cut(s)	3015
BsaI	GGTCTC	2 cut(s)	389, 3180
BsaJI	CCNNGG	4 cut(s)	350, 1671, 2377, 2796
Bsc4I	CCNNNNNNNGG	4 cut(s)	412, 1493, 2269, 2802
Bse1I	ACTGG	3 cut(s)	996, 1053, 1774
Bse3DI	GCAATG	2 cut(s)	1316, 1840
Bse8I	GATNNNNATC	1 cut(s)	3015
BseBI	CCWGG	2 cut(s)	1812, 2858
BseDI	CCNNGG	4 cut(s)	350, 1671, 2377, 2796
BseGI	GGATG	9 cut(s)	153, 201, 1408, 1465, 1720, 2080, 2236, 2608, 2811
BseJI	GATNNNNATC	1 cut(s)	3015
BseLI	CCNNNNNNNGG	4 cut(s)	412, 1493, 2269, 2802
BseMI	GCAATG	2 cut(s)	1316, 1840
BseMII	CTCAG	6 cut(s)	1260, 1623, 2454, 2718, 2861, 3191
BseNI	ACTGG	3 cut(s)	996, 1053, 1774
BseRI	GAGGAG	4 cut(s)	66, 1067, 1387, 1918
BseXI	GCAGC	1 cut(s)	688
BseYI	CCCAGC	1 cut(s)	38
BsgI	GTGCAG	1 cut(s)	272
BshFI	GGCC	5 cut(s)	332, 1670, 1810, 2262, 2647
BshNI	GGYRCC	2 cut(s)	452, 2434
BsiHKAI	GWGCWC	1 cut(s)	715
BslFI	GGGAC	2 cut(s)	380, 1462
BslI	CCNNNNNNNGG	4 cut(s)	412, 1493, 2269, 2802
BsmAI	GTCTC	4 cut(s)	389, 856, 2850, 3180
BsmFI	GGGAC	2 cut(s)	380, 1462
BsmI	GAATGC	3 cut(s)	658, 782, 1488
BsnI	GGCC	5 cut(s)	332, 1670, 1810, 2262, 2647
Bso31I	GGTCTC	2 cut(s)	389, 3180
Bsp119I	TTCGAA	1 cut(s)	929
Bsp1286I	GDGCHC	3 cut(s)	277, 715, 2713
Bsp1407I	TGTACA	2 cut(s)	1473, 1523
Bsp143I	GATC	6 cut(s)	1150, 1275, 1842, 2106, 2296, 3055
BspACI	CCGC	4 cut(s)	184, 1014, 1262, 2374
BspANI	GGCC	5 cut(s)	332, 1670, 1810, 2262, 2647
BspCNI	CTCAG	6 cut(s)	1261, 1622, 2453, 2719, 2860, 3190
BspHI	TCATGA	3 cut(s)	315, 1870, 3184
BspLI	GGNNCC	4 cut(s)	323, 454, 2436, 3057
BspPI	GGATC	3 cut(s)	1158, 3050, 3063
BspT104I	TTCGAA	1 cut(s)	929
BspT107I	GGYRCC	2 cut(s)	452, 2434
BspTNI	GGTCTC	2 cut(s)	389, 3180
BsrDI	GCAATG	2 cut(s)	1316, 1840
BsrGI	TGTACA	2 cut(s)	1473, 1523
BsrI	ACTGG	3 cut(s)	996, 1053, 1774
BssECI	CCNNGG	4 cut(s)	350, 1671, 2377, 2796
BssMI	GATC	6 cut(s)	1150, 1275, 1842, 2106, 2296, 3055
BssNAI	GTATAC	1 cut(s)	694
BssT1I	CCWWGG	2 cut(s)	2377, 2796
Bst1107I	GTATAC	1 cut(s)	694
Bst2UI	CCWGG	2 cut(s)	1812, 2858
Bst6I	CTCTTC	4 cut(s)	29, 111, 724, 854
BstAUI	TGTACA	2 cut(s)	1473, 1523
BstBAI	YACGTR	1 cut(s)	2477
BstBI	TTCGAA	1 cut(s)	929
BstC8I	GCNNGC	3 cut(s)	2912, 2930, 2977
BstDEI	CTNAG	9 cut(s)	6, 1269, 1609, 2319, 2440, 2642, 2727, 2847, 3177
BstDSI	CCRYGG	1 cut(s)	1671
BstENI	CCTNNNNNAGG	1 cut(s)	2267
BstF5I	GGATG	9 cut(s)	153, 201, 1408, 1465, 1720, 2080, 2236, 2608, 2811
BstKTI	GATC	6 cut(s)	1153, 1278, 1845, 2109, 2299, 3058
BstMAI	GTCTC	4 cut(s)	389, 856, 2850, 3180
BstMBI	GATC	6 cut(s)	1150, 1275, 1842, 2106, 2296, 3055
BstMWI	GCNNNNNNNGC	2 cut(s)	1648, 1987
BstNI	CCWGG	2 cut(s)	1812, 2858
BstNSI	RCATGY	5 cut(s)	364, 1620, 2065, 2555, 2983
BstSCI	CCNGG	2 cut(s)	1810, 2856
BstSFI	CTRYAG	3 cut(s)	799, 2121, 3032
BstSNI	TACGTA	1 cut(s)	2477
BstV1I	GCAGC	1 cut(s)	688
BstV2I	GAAGAC	2 cut(s)	45, 80
BstX2I	RGATCY	4 cut(s)	1150, 1275, 2296, 3055
BstXI	CCANNNNNNTGG	1 cut(s)	1024
BstYI	RGATCY	4 cut(s)	1150, 1275, 2296, 3055
BstZ17I	GTATAC	1 cut(s)	694
BsuI	GTATCC	1 cut(s)	2951
BsuRI	GGCC	5 cut(s)	332, 1670, 1810, 2262, 2647
BtgI	CCRYGG	1 cut(s)	1671
BtsCI	GGATG	9 cut(s)	153, 201, 1408, 1465, 1720, 2080, 2236, 2608, 2811
BtsI	GCAGTG	2 cut(s)	1902, 2958
BtsIMutI	CAGTG	8 cut(s)	600, 1902, 2290, 2658, 2724, 2921, 2958, 3218
Cac8I	GCNNGC	3 cut(s)	2912, 2930, 2977
CaiI	CAGNNNCTG	1 cut(s)	2957
CciI	TCATGA	3 cut(s)	315, 1870, 3184
Cfr13I	GGNCC	2 cut(s)	321, 2524
Csp6I	GTAC	8 cut(s)	453, 1314, 1474, 1524, 1540, 2219, 2435, 2745
CviQI	GTAC	8 cut(s)	453, 1314, 1474, 1524, 1540, 2219, 2435, 2745
DdeI	CTNAG	9 cut(s)	6, 1269, 1609, 2319, 2440, 2642, 2727, 2847, 3177
DpnI	GATC	6 cut(s)	1152, 1277, 1844, 2108, 2298, 3057
DpnII	GATC	6 cut(s)	1150, 1275, 1842, 2106, 2296, 3055
DraI	TTTAAA	4 cut(s)	1753, 1779, 1998, 2539
DraIII	CACNNNGTG	1 cut(s)	1795
EaeI	YGGCCR	2 cut(s)	330, 1668
Eam1104I	CTCTTC	4 cut(s)	29, 111, 724, 854
EarI	CTCTTC	4 cut(s)	29, 111, 724, 854
Eco105I	TACGTA	1 cut(s)	2477
Eco130I	CCWWGG	2 cut(s)	2377, 2796
Eco147I	AGGCCT	1 cut(s)	2647
Eco24I	GRGCYC	2 cut(s)	277, 2713
Eco31I	GGTCTC	2 cut(s)	389, 3180
Eco47I	GGWCC	2 cut(s)	321, 2524
Eco57I	CTGAAG	3 cut(s)	2090, 2229, 2825
EcoNI	CCTNNNNNAGG	1 cut(s)	2267
EcoO109I	RGGNCCY	1 cut(s)	321
EcoRI	GAATTC	1 cut(s)	2654
EcoRII	CCWGG	2 cut(s)	1810, 2856
EcoT14I	CCWWGG	2 cut(s)	2377, 2796
EcoT22I	ATGCAT	2 cut(s)	2236, 2398
EcoT38I	GRGCYC	2 cut(s)	277, 2713
ErhI	CCWWGG	2 cut(s)	2377, 2796
FalI	AAGNNNNNCTT	4 cut(s)	1693, 1725, 2370, 2402
FaqI	GGGAC	2 cut(s)	380, 1462
FauI	CCCGC	1 cut(s)	191
FauNDI	CATATG	1 cut(s)	2595
FblI	GTMKAC	1 cut(s)	693
Fnu4HI	GCNGC	2 cut(s)	677, 2374
FokI	GGATG	9 cut(s)	140, 188, 1415, 1472, 1727, 2087, 2243, 2615, 2818
FriOI	GRGCYC	2 cut(s)	277, 2713
Fsp4HI	GCNGC	2 cut(s)	677, 2374
FspBI	CTAG	5 cut(s)	989, 1175, 2024, 2294, 3249
GluI	GCNGC	2 cut(s)	677, 2374
GsaI	CCCAGC	1 cut(s)	42
GsuI	CTGGAG	6 cut(s)	687, 1070, 1314, 1410, 1791, 2879
HaeIII	GGCC	5 cut(s)	332, 1670, 1810, 2262, 2647
HindIII	AAGCTT	6 cut(s)	8, 336, 932, 1702, 2612, 2908
HphI	GGTGA	3 cut(s)	2320, 2708, 2742
Hpy166II	GTNNAC	3 cut(s)	694, 1789, 2219
Hpy188I	TCNGA	9 cut(s)	351, 829, 855, 1592, 1698, 2443, 2997, 3082, 3126
Hpy188III	TCNNGA	9 cut(s)	316, 666, 1154, 1293, 1871, 2152, 2228, 2827, 3185
Hpy8I	GTNNAC	3 cut(s)	694, 1789, 2219
HpyCH4IV	ACGT	2 cut(s)	124, 2476
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1648, 1987
HpyF3I	CTNAG	9 cut(s)	6, 1269, 1609, 2319, 2440, 2642, 2727, 2847, 3177
HpySE526I	ACGT	2 cut(s)	124, 2476
KpnI	GGTACC	2 cut(s)	456, 2438
Kzo9I	GATC	6 cut(s)	1150, 1275, 1842, 2106, 2296, 3055
LmnI	GCTCC	3 cut(s)	668, 2860, 3235
Lsp1109I	GCAGC	1 cut(s)	688
LweI	GCATC	7 cut(s)	292, 1450, 2074, 2221, 2383, 2488, 2593
MaeI	CTAG	5 cut(s)	989, 1175, 2024, 2294, 3249
MaeII	ACGT	2 cut(s)	124, 2476
MaeIII	GTNAC	5 cut(s)	80, 1213, 2662, 2953, 3044
MalI	GATC	6 cut(s)	1152, 1277, 1844, 2108, 2298, 3057
MboI	GATC	6 cut(s)	1150, 1275, 1842, 2106, 2296, 3055
MfeI	CAATTG	2 cut(s)	525, 954
MflI	RGATCY	4 cut(s)	1150, 1275, 2296, 3055
MhlI	GDGCHC	3 cut(s)	277, 715, 2713
MlsI	TGGCCA	2 cut(s)	332, 1670
MluNI	TGGCCA	2 cut(s)	332, 1670
MlyI	GAGTC	5 cut(s)	233, 844, 1401, 1883, 2906
MmeI	TCCRAC	2 cut(s)	788, 3104
Mox20I	TGGCCA	2 cut(s)	332, 1670
Mph1103I	ATGCAT	2 cut(s)	2236, 2398
MroXI	GAANNNNTTC	1 cut(s)	2838
MscI	TGGCCA	2 cut(s)	332, 1670
MslI	CAYNNNNRTG	2 cut(s)	294, 1676
Msp20I	TGGCCA	2 cut(s)	332, 1670
MspR9I	CCNGG	2 cut(s)	1812, 2858
MssI	GTTTAAAC	1 cut(s)	2539
MunI	CAATTG	2 cut(s)	525, 954
Mva1269I	GAATGC	3 cut(s)	658, 782, 1488
MvaI	CCWGG	2 cut(s)	1812, 2858
MwoI	GCNNNNNNNGC	2 cut(s)	1648, 1987
NdeI	CATATG	1 cut(s)	2595
NdeII	GATC	6 cut(s)	1150, 1275, 1842, 2106, 2296, 3055
NlaIV	GGNNCC	4 cut(s)	323, 454, 2436, 3057
NmeAIII	GCCGAG	1 cut(s)	68
NmuCI	GTSAC	2 cut(s)	2953, 3044
NsiI	ATGCAT	2 cut(s)	2236, 2398
NspI	RCATGY	5 cut(s)	364, 1620, 2065, 2555, 2983
NspV	TTCGAA	1 cut(s)	929
OliI	CACNNNNGTG	1 cut(s)	1676
PagI	TCATGA	3 cut(s)	315, 1870, 3184
PceI	AGGCCT	1 cut(s)	2647
PciI	ACATGT	2 cut(s)	2061, 2551
PcsI	WCGNNNNNNNCGW	1 cut(s)	1922
PctI	GAATGC	3 cut(s)	658, 782, 1488
PdmI	GAANNNNTTC	1 cut(s)	2838
PfeI	GAWTC	8 cut(s)	189, 355, 1029, 2047, 2325, 2411, 2468, 3101
PfoI	TCCNGGA	1 cut(s)	2856
PkrI	GCNGC	2 cut(s)	678, 2375
PleI	GAGTC	5 cut(s)	232, 843, 1400, 1882, 2905
PmeI	GTTTAAAC	1 cut(s)	2539
PpsI	GAGTC	5 cut(s)	232, 843, 1400, 1882, 2905
Ppu21I	YACGTR	1 cut(s)	2477
PpuMI	RGGWCCY	1 cut(s)	321
PscI	ACATGT	2 cut(s)	2061, 2551
PshBI	ATTAAT	4 cut(s)	1200, 1233, 1962, 2427
PsiI	TTATAA	3 cut(s)	1623, 2349, 2360
Psp5II	RGGWCCY	1 cut(s)	321
Psp6I	CCWGG	2 cut(s)	1810, 2856
PspFI	CCCAGC	1 cut(s)	38
PspGI	CCWGG	2 cut(s)	1810, 2856
PspN4I	GGNNCC	4 cut(s)	323, 454, 2436, 3057
PspPI	GGNCC	2 cut(s)	321, 2524
PspPPI	RGGWCCY	1 cut(s)	321
PstNI	CAGNNNCTG	1 cut(s)	2957
PsuI	RGATCY	4 cut(s)	1150, 1275, 2296, 3055
RsaI	GTAC	8 cut(s)	454, 1315, 1475, 1525, 1541, 2220, 2436, 2746
RsaNI	GTAC	8 cut(s)	453, 1314, 1474, 1524, 1540, 2219, 2435, 2745
RseI	CAYNNNNRTG	2 cut(s)	294, 1676
SatI	GCNGC	2 cut(s)	677, 2374
Sau3AI	GATC	6 cut(s)	1150, 1275, 1842, 2106, 2296, 3055
Sau96I	GGNCC	2 cut(s)	321, 2524
SchI	GAGTC	5 cut(s)	233, 844, 1401, 1883, 2906
ScrFI	CCNGG	2 cut(s)	1812, 2858
SduI	GDGCHC	3 cut(s)	277, 715, 2713
SfaNI	GCATC	7 cut(s)	292, 1450, 2074, 2221, 2383, 2488, 2593
SfcI	CTRYAG	3 cut(s)	799, 2121, 3032
SfuI	TTCGAA	1 cut(s)	929
SinI	GGWCC	2 cut(s)	321, 2524
SmiMI	CAYNNNNRTG	2 cut(s)	294, 1676
SmlI	CTYRAG	4 cut(s)	439, 1571, 2528, 2827
SmoI	CTYRAG	4 cut(s)	439, 1571, 2528, 2827
SnaBI	TACGTA	1 cut(s)	2477
SpeI	ACTAGT	1 cut(s)	2023
SseBI	AGGCCT	1 cut(s)	2647
SsiI	CCGC	4 cut(s)	184, 1014, 1262, 2374
SspI	AATATT	1 cut(s)	2338
SspMI	CTAG	5 cut(s)	989, 1175, 2024, 2294, 3249
StuI	AGGCCT	1 cut(s)	2647
StyD4I	CCNGG	2 cut(s)	1810, 2856
StyI	CCWWGG	2 cut(s)	2377, 2796
TaiI	ACGT	2 cut(s)	127, 2479
TaqI	TCGA	4 cut(s)	227, 786, 929, 3227
TatI	WGTACW	3 cut(s)	1313, 1473, 1523
TauI	GCSGC	1 cut(s)	2376
TfiI	GAWTC	8 cut(s)	189, 355, 1029, 2047, 2325, 2411, 2468, 3101
TscAI	CASTG	8 cut(s)	600, 1902, 2290, 2665, 2731, 2928, 2958, 3225
TseFI	GTSAC	2 cut(s)	2953, 3044
TseI	GCWGC	1 cut(s)	676
Tsp45I	GTSAC	2 cut(s)	2953, 3044
TspGWI	ACGGA	1 cut(s)	1688
TspRI	CASTG	8 cut(s)	600, 1902, 2290, 2665, 2731, 2928, 2958, 3225
VpaK11BI	GGWCC	2 cut(s)	321, 2524
VspI	ATTAAT	4 cut(s)	1200, 1233, 1962, 2427
XagI	CCTNNNNNAGG	1 cut(s)	2267
XapI	RAATTY	9 cut(s)	343, 1106, 1247, 1507, 1780, 1801, 2654, 2716, 2773
XceI	RCATGY	5 cut(s)	364, 1620, 2065, 2555, 2983
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1375, 2803
XmiI	GTMKAC	1 cut(s)	693
XmnI	GAANNNNTTC	1 cut(s)	2838
XspI	CTAG	5 cut(s)	989, 1175, 2024, 2294, 3249
Zsp2I	ATGCAT	2 cut(s)	2236, 2398

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.