Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0008661

Physical Location & Seq

Genomic Coordinates Reverse (-)

13526165 .. 13527931

Gene Structure 1767 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG089200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1767 bp

ATGATTGATGGGTACTGTAAAGTTGGTAGAATTGATGAGGCACTTGAGATATTTGATGAGTTCGGAAGGACACCACTTTCCTCAGTTGCATGTTATAATTGTATAATAAATTGGCTCTGTAAGCAGGGCATGGTAGATATGGCCACGGAGGTGTTTATTGAACTTAATCGGAAAAGCTTAACTTTGGATGATGGTATCTGCAAAATGCTTTTGAAGGCAACTTTTAAACAAAAAAGTGCAACTGGAGTTTTAAATTTGGTTCACAGAGTGGAAAATTTGAGGCCAGGTATGTATGATGTTACGAGCAATGTTGCAATCAGTTTCTTGTGCAAGAGAGGGTTTCATGAGTCTGCATTTGAAGTGTATGCAGTGATGAGGAGGGAAGGGTCGGTTGCAACGAGAAAAACTTATTATTCAATTTTAGAAGGTCTAATTAATGATGGAAAAGAGTGGCTAACTCTGCCTCTTTTAAACATCTTTCTAAAAGAATATGGACTAGTTGAACCTAAAGTAAACCAGATTCTTGCTTACCACACGTGCCTGAAGGATGTCAATGATGCTTTCTGCTTTTTAGAAAAGATCAAGGACAGACCTACAGCCATTACCTTGCCTATTTCTCTTTTCAAGACACTTATGAAGAAGGGTAAAGTTTTGGTTGCATATCAGCTTTTCATGGAGGCTGAAGATAGTGTACCCGTTCTGGATGCATTTGATTATTCGCACATGGTTGATGGCCTTTGCAAGGGAGGATATATCAGTGAGGCACTAGATCTCTGTGGTTTTGCTAAATGTAAGGGAATCACCCTGAATATTATTGCTTATAATTCAGTTATAAATGGATTGTGCCGCCAAGGTCATCTTGTTGATGCATTTCGGCTATTTAATTCATTAGAGAGAATTAATTTGGTACCCTCAGAAATCACTTATGCTACATTGATTGATTCCCTACGTAGAGAGGGGTTTCTGCTTGATGCAAAGCAATTATTTGAAAGCATGGTCCTCAAGGGGTTTAAACCGAATACACATGTATATAACTCTATTATTAATGGTTTTTGCAAAATTGGACATATGGAGGATGCCTTGAAGCTTCTTTGTGAATTGGACATGAAATCTCTTAGGCCTGATGAATTCACTGTTACTATTGTCATCAATGGCTTTTGCCAAAAGGGTGATATGGAAGGGGCTCTAAATTTCTTCACTGAGTTCAAAAGAAATGGTACATCACCTGATTTTTTGGGTTTCTTAAATTTGATAAGAGGTTTATGTGCCAAGGGAAGGATGGAAGAAGCCAGAAGTATCTTGAGAGAAATGCTTCAGTCTCAGTCTGTCCTGGAGCTAATAAATAGAGTTGATGTTGAGCTGGAAACGGAGTCATTGGAAAACTTGCTTGTTTCACTGTGCGAGCAAGGAAGTATCCAAGAAGCAGTGACTGTTCTTAATGAAATCGCGTCCATGTTTTTCCCTGTTCGGAGTTCATCTATTGATTGCCATCAATCTCATAAACTACAGAAGCCTTGTGACAGCGAGGATCCTAAAACAGTTACTTCAAAATCTGTAACTTCCATCAATGCAGATTCGGGTATTCAGTTTTCTGGTCTGAAGAAAGTAGAGAAGGTGGCAAAAACTTGTGATGTTATAGGGAGTAGGTCTCAGTTTCATGACTTTGATTATTACTATAAGCAAATTGCTTCACTGTGTTCGATAGGGGAGCTACAAAAGGCTAGTGAATTAGTAAAGGAAATAGTTTCTAATTTGGGCAAGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

588

Amino Acids

65.97

Weight (kDa)

5.93

Isoelectric Point (pI)

35.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_1	PF12854	1 - 20	6.6e-06	PPR repeat
PPR_2	PF13041	28 - 63	5.1e-07	PPR repeat family
PPR_2	PF13041	239 - 283	4.8e-07	PPR repeat family
PPR_1	PF12854	265 - 296	1.7e-09	PPR repeat
PPR_2	PF13041	270 - 316	1.2e-12	PPR repeat family
PPR_2	PF13041	311 - 353	2.9e-08	PPR repeat family
PPR_1	PF12854	335 - 366	2e-10	PPR repeat
PPR_2	PF13041	339 - 388	4.7e-16	PPR repeat family
PPR	PF01535	343 - 368	6.8e-06	PPR repeat
PPR_1	PF12854	371 - 401	3.1e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008661)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57250
fragaria_vesca	FvH4_4g07420
malus_domestica	MD13G1243700.v1.1 MD16G1250300.v1.1 MD16G1250400.v1.1 MD16G1250500.v1.1 MD16G1250600.v1.1
prunus_persica	Prupe.1G077100_v2.0.a1
pyrus_communis	pycom13g21510 pycom16g21000
rosa_chinensis	RchiOBHm_Chr2g0131261 RchiOBHm_Chr4g0399881
rosa_laevigata	RLG00000009236
rosa_multiflora	Rmu_sc0014676.1_g000003
rosa_roxburghii	Rroxscaffold_5G00344750
rosa_rugosa	Rorug04G0019700
rosa_samantha	Rh2BG356200 Rh4AG096800 Rh4BG094300 Rh4CG105900 Rh4DG089200 Rh4DG091000
rosa_wichuraiana	Rw4G008000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	96, 822, 833
Acc65I	GGTACC	1 cut(s)	907
AccB1I	GGYRCC	1 cut(s)	907
AccII	CGCG	1 cut(s)	1448
AciI	CCGC	1 cut(s)	847
AclWI	GGATC	2 cut(s)	1523, 1536
AcoI	YGGCCR	1 cut(s)	141
AcsI	RAATTY	5 cut(s)	253, 274, 1127, 1189, 1246
AcuI	CTGAAG	4 cut(s)	563, 702, 1298, 1619
AcvI	CACGTG	1 cut(s)	537
AdeI	CACNNNGTG	1 cut(s)	268
AfaI	GTAC	4 cut(s)	14, 693, 909, 1219
AfiI	CCNNNNNNNGG	2 cut(s)	742, 1275
AflIII	ACRYGT	2 cut(s)	534, 1024
AhlI	ACTAGT	1 cut(s)	496
AjnI	CCWGG	2 cut(s)	283, 1329
AleI	CACNNNNGTG	1 cut(s)	149
AluBI	AGCT	6 cut(s)	177, 667, 1087, 1336, 1360, 1711
AluI	AGCT	6 cut(s)	177, 667, 1087, 1336, 1360, 1711
Alw26I	GTCTC	2 cut(s)	1323, 1653
AlwI	GGATC	2 cut(s)	1523, 1536
AlwNI	CAGNNNCTG	1 cut(s)	1430
AoxI	GGCC	4 cut(s)	141, 281, 733, 1118
ApoI	RAATTY	5 cut(s)	253, 274, 1127, 1189, 1246
AseI	ATTAAT	3 cut(s)	435, 900, 1044
Asp700I	GAANNNNTTC	1 cut(s)	1311
Asp718I	GGTACC	1 cut(s)	907
AspS9I	GGNCC	1 cut(s)	997
AsuHPI	GGTGA	3 cut(s)	793, 1181, 1215
AvaII	GGWCC	1 cut(s)	997
BalI	TGGCCA	1 cut(s)	143
BamHI	GGATCC	1 cut(s)	1528
BanI	GGYRCC	1 cut(s)	907
BanII	GRGCYC	1 cut(s)	1186
BarI	GAAGNNNNNNTAC	2 cut(s)	675, 707
BbrPI	CACGTG	1 cut(s)	537
BccI	CCATC	7 cut(s)	2, 185, 434, 725, 1273, 1497, 1571
BciT130I	CCWGG	2 cut(s)	285, 1331
BciVI	GTATCC	1 cut(s)	1424
BcoDI	GTCTC	2 cut(s)	1323, 1653
BcuI	ACTAGT	1 cut(s)	496
BfaI	CTAG	3 cut(s)	497, 767, 1722
BfmI	CTRYAG	2 cut(s)	594, 1505
BfuI	GTATCC	1 cut(s)	1424
BglII	AGATCT	1 cut(s)	769
BisI	GCNGC	1 cut(s)	847
BlsI	GCNGC	1 cut(s)	848
Bme1390I	CCNGG	2 cut(s)	285, 1331
Bme18I	GGWCC	1 cut(s)	997
BmgT120I	GGNCC	1 cut(s)	997
BmiI	GGNNCC	2 cut(s)	909, 1530
BmrFI	CCNGG	2 cut(s)	285, 1331
BmsI	GCATC	5 cut(s)	547, 694, 856, 961, 1066
BplI	GAGNNNNNCTC	2 cut(s)	1633, 1665
BpmI	CTGGAG	2 cut(s)	264, 1352
BpuEI	CTTGAG	3 cut(s)	65, 986, 1321
BsaAI	YACGTR	2 cut(s)	537, 950
BsaBI	GATNNNNATC	1 cut(s)	1488
BsaI	GGTCTC	1 cut(s)	1653
BsaJI	CCNNGG	3 cut(s)	144, 850, 1269
Bsc4I	CCNNNNNNNGG	2 cut(s)	742, 1275
Bse1I	ACTGG	1 cut(s)	247
Bse3DI	GCAATG	1 cut(s)	313
Bse8I	GATNNNNATC	1 cut(s)	1488
BseBI	CCWGG	2 cut(s)	285, 1331
BseDI	CCNNGG	3 cut(s)	144, 850, 1269
BseGI	GGATG	5 cut(s)	193, 553, 709, 1081, 1284
BseJI	GATNNNNATC	1 cut(s)	1488
BseLI	CCNNNNNNNGG	2 cut(s)	742, 1275
BseMI	GCAATG	1 cut(s)	313
BseMII	CTCAG	5 cut(s)	96, 927, 1191, 1334, 1664
BseNI	ACTGG	1 cut(s)	247
BseRI	GAGGAG	1 cut(s)	391
Bsh1236I	CGCG	1 cut(s)	1448
BshFI	GGCC	4 cut(s)	143, 283, 735, 1120
BshNI	GGYRCC	1 cut(s)	907
BslI	CCNNNNNNNGG	2 cut(s)	742, 1275
BsmAI	GTCTC	2 cut(s)	1323, 1653
BsnI	GGCC	4 cut(s)	143, 283, 735, 1120
Bso31I	GGTCTC	1 cut(s)	1653
Bsp1286I	GDGCHC	1 cut(s)	1186
Bsp143I	GATC	3 cut(s)	579, 769, 1528
BspACI	CCGC	1 cut(s)	847
BspANI	GGCC	4 cut(s)	143, 283, 735, 1120
BspCNI	CTCAG	5 cut(s)	95, 926, 1192, 1333, 1663
BspFNI	CGCG	1 cut(s)	1448
BspHI	TCATGA	2 cut(s)	343, 1657
BspLI	GGNNCC	2 cut(s)	909, 1530
BspPI	GGATC	2 cut(s)	1523, 1536
BspT107I	GGYRCC	1 cut(s)	907
BspTNI	GGTCTC	1 cut(s)	1653
BsrDI	GCAATG	1 cut(s)	313
BsrI	ACTGG	1 cut(s)	247
BssECI	CCNNGG	3 cut(s)	144, 850, 1269
BssMI	GATC	3 cut(s)	579, 769, 1528
BssT1I	CCWWGG	2 cut(s)	850, 1269
Bst2UI	CCWGG	2 cut(s)	285, 1331
Bst4CI	ACNGT	6 cut(s)	17, 1135, 1398, 1432, 1540, 1695
BstBAI	YACGTR	2 cut(s)	537, 950
BstC8I	GCNNGC	1 cut(s)	1403
BstDEI	CTNAG	6 cut(s)	82, 913, 1115, 1200, 1320, 1650
BstDSI	CCRYGG	1 cut(s)	144
BstENI	CCTNNNNNAGG	1 cut(s)	740
BstF5I	GGATG	5 cut(s)	193, 553, 709, 1081, 1284
BstFNI	CGCG	1 cut(s)	1448
BstKTI	GATC	3 cut(s)	582, 772, 1531
BstMAI	GTCTC	2 cut(s)	1323, 1653
BstMBI	GATC	3 cut(s)	579, 769, 1528
BstMWI	GCNNNNNNNGC	2 cut(s)	121, 460
BstNI	CCWGG	2 cut(s)	285, 1331
BstNSI	RCATGY	2 cut(s)	93, 1028
BstSCI	CCNGG	2 cut(s)	283, 1329
BstSFI	CTRYAG	2 cut(s)	594, 1505
BstSNI	TACGTA	1 cut(s)	950
BstUI	CGCG	1 cut(s)	1448
BstX2I	RGATCY	2 cut(s)	769, 1528
BstYI	RGATCY	2 cut(s)	769, 1528
BsuI	GTATCC	1 cut(s)	1424
BsuRI	GGCC	4 cut(s)	143, 283, 735, 1120
BtgI	CCRYGG	1 cut(s)	144
BtsCI	GGATG	5 cut(s)	193, 553, 709, 1081, 1284
BtsI	GCAGTG	2 cut(s)	375, 1431
BtsIMutI	CAGTG	7 cut(s)	375, 763, 1131, 1197, 1394, 1431, 1691
Cac8I	GCNNGC	1 cut(s)	1403
CaiI	CAGNNNCTG	1 cut(s)	1430
CciI	TCATGA	2 cut(s)	343, 1657
Cfr13I	GGNCC	1 cut(s)	997
CseI	GACGC	1 cut(s)	1437
Csp6I	GTAC	4 cut(s)	13, 692, 908, 1218
CviQI	GTAC	4 cut(s)	13, 692, 908, 1218
DdeI	CTNAG	6 cut(s)	82, 913, 1115, 1200, 1320, 1650
DpnI	GATC	3 cut(s)	581, 771, 1530
DpnII	GATC	3 cut(s)	579, 769, 1528
DraI	TTTAAA	4 cut(s)	226, 252, 471, 1012
DraIII	CACNNNGTG	1 cut(s)	268
EaeI	YGGCCR	1 cut(s)	141
Eco105I	TACGTA	1 cut(s)	950
Eco130I	CCWWGG	2 cut(s)	850, 1269
Eco147I	AGGCCT	1 cut(s)	1120
Eco24I	GRGCYC	1 cut(s)	1186
Eco31I	GGTCTC	1 cut(s)	1653
Eco47I	GGWCC	1 cut(s)	997
Eco57I	CTGAAG	4 cut(s)	563, 702, 1298, 1619
Eco72I	CACGTG	1 cut(s)	537
EcoNI	CCTNNNNNAGG	1 cut(s)	740
EcoRI	GAATTC	1 cut(s)	1127
EcoRII	CCWGG	2 cut(s)	283, 1329
EcoT14I	CCWWGG	2 cut(s)	850, 1269
EcoT22I	ATGCAT	2 cut(s)	709, 871
EcoT38I	GRGCYC	1 cut(s)	1186
ErhI	CCWWGG	2 cut(s)	850, 1269
FalI	AAGNNNNNCTT	4 cut(s)	166, 198, 843, 875
FauNDI	CATATG	1 cut(s)	1068
Fnu4HI	GCNGC	1 cut(s)	847
FokI	GGATG	5 cut(s)	200, 560, 716, 1088, 1291
FriOI	GRGCYC	1 cut(s)	1186
Fsp4HI	GCNGC	1 cut(s)	847
FspBI	CTAG	3 cut(s)	497, 767, 1722
GluI	GCNGC	1 cut(s)	847
GsuI	CTGGAG	2 cut(s)	264, 1352
HaeIII	GGCC	4 cut(s)	143, 283, 735, 1120
HgaI	GACGC	1 cut(s)	1437
HindIII	AAGCTT	2 cut(s)	175, 1085
HinfI	GANTC	6 cut(s)	347, 520, 798, 941, 1370, 1574
HphI	GGTGA	3 cut(s)	793, 1181, 1215
Hpy166II	GTNNAC	3 cut(s)	262, 514, 692
Hpy188I	TCNGA	5 cut(s)	65, 171, 916, 1470, 1599
Hpy188III	TCNNGA	5 cut(s)	344, 625, 701, 1300, 1658
Hpy8I	GTNNAC	3 cut(s)	262, 514, 692
HpyAV	CCTTC	9 cut(s)	60, 208, 377, 419, 538, 634, 1172, 1269, 1606
HpyCH4III	ACNGT	6 cut(s)	17, 1135, 1398, 1432, 1540, 1695
HpyCH4IV	ACGT	2 cut(s)	536, 949
HpyF10VI	GCNNNNNNNGC	2 cut(s)	121, 460
HpyF3I	CTNAG	6 cut(s)	82, 913, 1115, 1200, 1320, 1650
HpySE526I	ACGT	2 cut(s)	536, 949
KpnI	GGTACC	1 cut(s)	911
Kzo9I	GATC	3 cut(s)	579, 769, 1528
LmnI	GCTCC	2 cut(s)	1333, 1708
LweI	GCATC	5 cut(s)	547, 694, 856, 961, 1066
MaeI	CTAG	3 cut(s)	497, 767, 1722
MaeII	ACGT	2 cut(s)	536, 949
MaeIII	GTNAC	6 cut(s)	298, 1135, 1426, 1517, 1540, 1555
MalI	GATC	3 cut(s)	581, 771, 1530
MboI	GATC	3 cut(s)	579, 769, 1528
MboII	GAAGA	5 cut(s)	649, 695, 1186, 1295, 1612
MflI	RGATCY	2 cut(s)	769, 1528
MhlI	GDGCHC	1 cut(s)	1186
MlsI	TGGCCA	1 cut(s)	143
MluNI	TGGCCA	1 cut(s)	143
MlyI	GAGTC	2 cut(s)	356, 1379
Mox20I	TGGCCA	1 cut(s)	143
Mph1103I	ATGCAT	2 cut(s)	709, 871
MroXI	GAANNNNTTC	1 cut(s)	1311
MscI	TGGCCA	1 cut(s)	143
MslI	CAYNNNNRTG	1 cut(s)	149
Msp20I	TGGCCA	1 cut(s)	143
MspR9I	CCNGG	2 cut(s)	285, 1331
MssI	GTTTAAAC	1 cut(s)	1012
MvaI	CCWGG	2 cut(s)	285, 1331
MvnI	CGCG	1 cut(s)	1448
MwoI	GCNNNNNNNGC	2 cut(s)	121, 460
NdeI	CATATG	1 cut(s)	1068
NdeII	GATC	3 cut(s)	579, 769, 1528
NlaIV	GGNNCC	2 cut(s)	909, 1530
NmuCI	GTSAC	2 cut(s)	1426, 1517
NsiI	ATGCAT	2 cut(s)	709, 871
NspI	RCATGY	2 cut(s)	93, 1028
OliI	CACNNNNGTG	1 cut(s)	149
PagI	TCATGA	2 cut(s)	343, 1657
PceI	AGGCCT	1 cut(s)	1120
PciI	ACATGT	1 cut(s)	1024
PcsI	WCGNNNNNNNCGW	1 cut(s)	395
PdmI	GAANNNNTTC	1 cut(s)	1311
PfeI	GAWTC	4 cut(s)	520, 798, 941, 1574
PfoI	TCCNGGA	1 cut(s)	1329
PkrI	GCNGC	1 cut(s)	848
PleI	GAGTC	2 cut(s)	355, 1378
PmaCI	CACGTG	1 cut(s)	537
PmeI	GTTTAAAC	1 cut(s)	1012
PmlI	CACGTG	1 cut(s)	537
PpsI	GAGTC	2 cut(s)	355, 1378
Ppu21I	YACGTR	2 cut(s)	537, 950
PscI	ACATGT	1 cut(s)	1024
PshBI	ATTAAT	3 cut(s)	435, 900, 1044
PsiI	TTATAA	3 cut(s)	96, 822, 833
Psp6I	CCWGG	2 cut(s)	283, 1329
PspCI	CACGTG	1 cut(s)	537
PspGI	CCWGG	2 cut(s)	283, 1329
PspN4I	GGNNCC	2 cut(s)	909, 1530
PspPI	GGNCC	1 cut(s)	997
PstNI	CAGNNNCTG	1 cut(s)	1430
PsuI	RGATCY	2 cut(s)	769, 1528
RsaI	GTAC	4 cut(s)	14, 693, 909, 1219
RsaNI	GTAC	4 cut(s)	13, 692, 908, 1218
RseI	CAYNNNNRTG	1 cut(s)	149
SatI	GCNGC	1 cut(s)	847
Sau3AI	GATC	3 cut(s)	579, 769, 1528
Sau96I	GGNCC	1 cut(s)	997
SchI	GAGTC	2 cut(s)	356, 1379
ScrFI	CCNGG	2 cut(s)	285, 1331
SduI	GDGCHC	1 cut(s)	1186
SfaNI	GCATC	5 cut(s)	547, 694, 856, 961, 1066
SfcI	CTRYAG	2 cut(s)	594, 1505
SinI	GGWCC	1 cut(s)	997
SmiMI	CAYNNNNRTG	1 cut(s)	149
SmlI	CTYRAG	3 cut(s)	44, 1001, 1300
SmoI	CTYRAG	3 cut(s)	44, 1001, 1300
SnaBI	TACGTA	1 cut(s)	950
SpeI	ACTAGT	1 cut(s)	496
SseBI	AGGCCT	1 cut(s)	1120
SsiI	CCGC	1 cut(s)	847
SspI	AATATT	1 cut(s)	811
SspMI	CTAG	3 cut(s)	497, 767, 1722
StuI	AGGCCT	1 cut(s)	1120
StyD4I	CCNGG	2 cut(s)	283, 1329
StyI	CCWWGG	2 cut(s)	850, 1269
TaaI	ACNGT	6 cut(s)	17, 1135, 1398, 1432, 1540, 1695
TaiI	ACGT	2 cut(s)	539, 952
TaqI	TCGA	1 cut(s)	1700
TauI	GCSGC	1 cut(s)	849
TfiI	GAWTC	4 cut(s)	520, 798, 941, 1574
TscAI	CASTG	7 cut(s)	375, 763, 1138, 1204, 1401, 1431, 1698
TseFI	GTSAC	2 cut(s)	1426, 1517
Tsp45I	GTSAC	2 cut(s)	1426, 1517
TspDTI	ATGAA	9 cut(s)	332, 650, 661, 876, 1121, 1140, 1455, 1464, 1646
TspGWI	ACGGA	2 cut(s)	161, 1382
TspRI	CASTG	7 cut(s)	375, 763, 1138, 1204, 1401, 1431, 1698
VpaK11BI	GGWCC	1 cut(s)	997
VspI	ATTAAT	3 cut(s)	435, 900, 1044
XagI	CCTNNNNNAGG	1 cut(s)	740
XapI	RAATTY	5 cut(s)	253, 274, 1127, 1189, 1246
XceI	RCATGY	2 cut(s)	93, 1028
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1276
XmnI	GAANNNNTTC	1 cut(s)	1311
XspI	CTAG	3 cut(s)	497, 767, 1722
Zsp2I	ATGCAT	2 cut(s)	709, 871

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.