Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0003650

Physical Location & Seq

Genomic Coordinates Forward (+)

23467922 .. 23472631

Gene Structure 4710 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1195700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGGGGCGCTCTTGCTTTTTGCACTTACCCCTCTCCCTCTCTCCTTTCCCCTCTTCTTCTTCTTCTTCTTCTTCCTCTCACCCCATTTTCCCGTGTTCCTCCTCCAGGAATGCAGATACCAGGAGGAGGAGGACGACGTTGCCAATGGCATCCCTGCGCCAGGAGGACTCAAACGACGGCGTTTGCAGCAGGAGGAGGGCTATTCTGTTTGTGGGTATTTCAGTTCTTCCATTTTTGCAGCTCAGGGGCACTGCTCTTGAAGGCTTGGCCACTAAAGAAAGTGAGCTAAAGACACTGGAGGAGAGTAAAAACGCAGAGGAAGCACCTCAAACAAATGGAGCACCAAATCCCGTTTTGTCTCTCCTGAATGGCGTTGGTATATTCAGTTCTGGTGTCGTCGGTGCACTCTATGCGTTGACTCAGTCGGAAAAGAAAGCCACTGATGCCATGGTCGAATCTATGAAGACCAAGCTGAAAGAAAAGGAAGCTGCTATTGTTTCACTGGGGAAGAGCTATGAATCTAAGCTACTAGGTGAACAGGAAGAACGGAGCAAGCAACTCGCAAAGGCAAAGGAAGAGCAGAATTCTCTAACAAGCCAACTGAGTTCGGCAAAAAGTACAATTGCAAGCTTAGGAAAGGAACTAAATGGTGAGAAGAAATTGATTGAGGAGCTTAAAATTCAAATTGGCAGTCTTAAAACCAACCTTTCAAGGGCCGGAGAAGAAAAAGTGGTACTTGAAGAAAATTTGAAGGAAAAGCAAAACTCAATTGAAGTCCTACAGGGAAGGATTGATTTGCTCAATTCAGACATCAATGATAAAGAAAATAATGTTCAAAGTCTTGGCTCTTCTCTTGTTGCAAAAGATATGGAGTTGAAGGACTTGAAATCTATCTACAATCAAACGAGGGATGAACTAGCCAATACACTTTCAGATATTCAAAAATTGAAGGGCGAAGTCCTGAAAAATCAAAAGGAATTGGATTTGAAGAATTTATATGTCGATGAACTGAATGCAACCGTTAGTTCTTTAATTTCTGAGATGGATGATTTGAAGAGGAAGTTTGTTGCTATTCAGGAGGAATACAATAAGCTGAAGACATCCTCCGCTAGAAAGGCAGATTTGGATGCTAAGCATTTGGGAGAAAAGGAAGAGCAACTTCAGCAGCTAAAGGAAAAGCTTGAACTTGCTCTGAATGACACGAGTAGAAACAAAGAAGTAATTGCTGATTTGACCCGAGAGAAGGAAAATTTGAAGGAAATTCTGGATAAAGAACTGGAAAATGAAAAGAATCTGAAACTTGAACTCAAGAGTACTCAGGAAGCTCTTGTAAAATCAAGAAGTGAAGCTTCCAATTTGGAAAATCAATTAAAACAGTCAAAATTTTTGTGCACGGAGCTTGAAGCTGAGATCTCTAGGGTTCAGGCCGAGTTTGCTGGGGTCAGGGAATCGCTGCAGAGGAGCCTTGATGAGGCTACCTTAAGTGGTGATGCCGTTGCCGGTGAGCTTGCTGCAGCAAAGGAACTTTTGAAGAAGACAAATGAGGAGCTGCAAGTTCTGTCCCAGGAATTAGCAACTGCTGCGACAAAACGTGATAGCCTGCAGGAGGAATTGGTTGACGTCTATAAAGATGCCGAAAGAGCTTCTAATGATCTAAAAGAAGAAAAAGAGCTAGTTTCTTCTTTAAAAAAAGAAGTTCAAGCTCTGGAGAAGCAGATTTCGAAAGACAAGCAGTCTCGTAAGTCTCTTGAAACAGACCTGGAAGGGGCTACCAAAGCACTGGATGAGATGAGCCGAAATGCGTTGGTACTTTCCCAAGATTTTGAGAGGGCTAATTCTCTAATTTCTAGCCTTGAAGATGAGAAAGAGGTCGTTTACAAGTCCCTAACAGAGCAAAAGATTGCGTCCAAAGAGGCCCGAGAAAACATGGAAGATGTCCGTAATCTTGCCATGAGACTGAGCGAGGAAAGGGATGGTCTGGAGAAGAGAAGCAAAAAATTGGAAGGGGAATTGGCATCTGCCAAGGGTGAAATATTGCGGCTAAGAAATCAAATAAACTCGTCCAAAAAACTTGTAAATAATCAGCAACCGCGGGAAAAGGCTGAAGAGCCTGTCACTGTCGCTCCAAGAAAAGGTGGTAGGAGGAAAAAGGCTGCCGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0009295 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0016020 GO:0016363 GO:0031974 GO:0031976 GO:0031981 GO:0031984 GO:0034357 GO:0034399 GO:0042646 GO:0042651 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035 GO:0070013 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

721

Amino Acids

80.14

Weight (kDa)

5.68

Isoelectric Point (pI)

49.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cast	PF10174	141 - 307	5.9e-06	RIM-binding protein of the cytomatrix active zone

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003650)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16000
fragaria_vesca	FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081
malus_domestica	MD09G1212900.v1.1 MD09G1213300.v1.1 MD09G1213400.v1.1 MD09G1213500.v1.1 MD09G1213800.v1.1 MD17G1195700.v1.1
prunus_persica	Prupe.3G071700_v2.0.a1
pyrus_communis	pycom09g13050 pycom17g20130 pycom17g20140
rosa_chinensis	RchiOBHm_Chr2g0137781
rosa_laevigata	RLG00000019675
rosa_multiflora	Rmu_sc0008635.1_g000002
rosa_roxburghii	Rroxscaffold_2G00106850
rosa_rugosa	Rorug02G0345400 Rorug02G0345500 Rorug02G0345600 Rorug02G0345600 Rorug02G0345700 Rorug02G0345700
rosa_samantha	Rh2AG392700 Rh2BG400400 Rh2CG379400 Rh2DG415300
rosa_wichuraiana	Rw2G032170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1623
AccII	CGCG	1 cut(s)	2092
AciI	CCGC	4 cut(s)	1107, 2038, 2090, 2092
AcoI	YGGCCR	1 cut(s)	267
AcsI	RAATTY	7 cut(s)	583, 678, 745, 991, 1249, 1260, 1382
AcuI	CTGAAG	3 cut(s)	1115, 1145, 2124
AcyI	GRCGYC	1 cut(s)	1620
AfaI	GTAC	4 cut(s)	619, 735, 1315, 1809
AfiI	CCNNNNNNNGG	9 cut(s)	105, 126, 160, 712, 1243, 1471, 1606, 1765, 2132
AflII	CTTAAG	1 cut(s)	1480
AhdI	GACNNNNNGTC	1 cut(s)	1732
AjnI	CCWGG	5 cut(s)	104, 119, 159, 1563, 1758
Alw21I	GWGCWC	3 cut(s)	343, 406, 1394
Alw26I	GTCTC	4 cut(s)	363, 1740, 1749, 1948
Alw44I	GTGCAC	2 cut(s)	402, 1390
Ama87I	CYCGRG	2 cut(s)	1236, 1917
AoxI	GGCC	4 cut(s)	267, 714, 1425, 1914
ApaLI	GTGCAC	2 cut(s)	402, 1390
ApoI	RAATTY	7 cut(s)	583, 678, 745, 991, 1249, 1260, 1382
ArsI	GACNNNNNNTTYG	2 cut(s)	676, 708
AspLEI	GCGC	2 cut(s)	9, 159
AspS9I	GGNCC	2 cut(s)	714, 1915
AsuHPI	GGTGA	6 cut(s)	71, 545, 662, 1499, 1514, 2039
AsuII	TTCGAA	1 cut(s)	1721
AvaI	CYCGRG	2 cut(s)	1236, 1917
BaeGI	GKGCMC	3 cut(s)	251, 406, 1394
BalI	TGGCCA	1 cut(s)	269
BauI	CACGAG	1 cut(s)	1201
BbsI	GAAGAC	3 cut(s)	470, 1103, 1541
Bbv12I	GWGCWC	3 cut(s)	343, 406, 1394
BccI	CCATC	2 cut(s)	1036, 1967
BceAI	ACGGC	2 cut(s)	193, 1478
BcgI	CGANNNNNNTGC	2 cut(s)	541, 575
BciT130I	CCWGG	5 cut(s)	106, 121, 161, 1565, 1760
BcoDI	GTCTC	4 cut(s)	363, 1740, 1749, 1948
BfaI	CTAG	6 cut(s)	530, 917, 1110, 1416, 1673, 1848
BfmI	CTRYAG	4 cut(s)	779, 1454, 1512, 1601
BfoI	RGCGCY	1 cut(s)	10
BfrI	CTTAAG	1 cut(s)	1480
BglII	AGATCT	1 cut(s)	1410
BlpI	GCTNAGC	1 cut(s)	1131
BmcAI	AGTACT	1 cut(s)	1315
Bme1390I	CCNGG	5 cut(s)	106, 121, 161, 1565, 1760
BmeRI	GACNNNNNGTC	1 cut(s)	1732
BmeT110I	CYCGRG	2 cut(s)	1236, 1917
BmgT120I	GGNCC	2 cut(s)	714, 1915
BmiI	GGNNCC	1 cut(s)	1463
BmrFI	CCNGG	5 cut(s)	106, 121, 161, 1565, 1760
BmrI	ACTGGG	1 cut(s)	512
BmsI	GCATC	6 cut(s)	158, 433, 1117, 1480, 1621, 2024
BmuI	ACTGGG	1 cut(s)	512
BpiI	GAAGAC	3 cut(s)	470, 1103, 1541
BpmI	CTGGAG	4 cut(s)	88, 317, 1727, 2000
Bpu10I	CCTNAGC	2 cut(s)	242, 631
Bpu1102I	GCTNAGC	1 cut(s)	1131
Bpu14I	TTCGAA	1 cut(s)	1721
BpuEI	CTTGAG	1 cut(s)	1292
BsaHI	GRCGYC	1 cut(s)	1620
BsaJI	CCNNGG	4 cut(s)	447, 1563, 2022, 2090
BsaXI	ACNNNNNCTCC	2 cut(s)	2107, 2137
Bsc4I	CCNNNNNNNGG	9 cut(s)	105, 126, 160, 712, 1243, 1471, 1606, 1765, 2132
Bse118I	RCCGGY	1 cut(s)	1499
Bse1I	ACTGG	4 cut(s)	300, 507, 1281, 1785
BseBI	CCWGG	5 cut(s)	106, 121, 161, 1565, 1760
BseDI	CCNNGG	4 cut(s)	447, 1563, 2022, 2090
BseGI	GGATG	7 cut(s)	149, 916, 1051, 1100, 1132, 1789, 1978
BseLI	CCNNNNNNNGG	9 cut(s)	105, 126, 160, 712, 1243, 1471, 1606, 1765, 2132
BseMII	CTCAG	7 cut(s)	256, 434, 593, 1029, 1331, 1398, 1949
BseNI	ACTGG	4 cut(s)	300, 507, 1281, 1785
BseRI	GAGGAG	8 cut(s)	91, 139, 142, 208, 314, 683, 1474, 1559
BseSI	GKGCMC	3 cut(s)	251, 406, 1394
BseYI	CCCAGC	1 cut(s)	1436
Bsh1236I	CGCG	1 cut(s)	2092
BshFI	GGCC	4 cut(s)	269, 716, 1427, 1916
BsiHKAI	GWGCWC	3 cut(s)	343, 406, 1394
BsiHKCI	CYCGRG	2 cut(s)	1236, 1917
BsiSI	CCGG	2 cut(s)	717, 1500
BslFI	GGGAC	2 cut(s)	1546, 1867
BslI	CCNNNNNNNGG	9 cut(s)	105, 126, 160, 712, 1243, 1471, 1606, 1765, 2132
BsmAI	GTCTC	4 cut(s)	363, 1740, 1749, 1948
BsmFI	GGGAC	2 cut(s)	1546, 1867
BsmI	GAATGC	2 cut(s)	115, 1018
BsnI	GGCC	4 cut(s)	269, 716, 1427, 1916
BsoBI	CYCGRG	2 cut(s)	1236, 1917
Bsp119I	TTCGAA	1 cut(s)	1721
Bsp1286I	GDGCHC	4 cut(s)	251, 343, 406, 1394
Bsp143I	GATC	2 cut(s)	1410, 1651
Bsp1720I	GCTNAGC	1 cut(s)	1131
Bsp19I	CCATGG	1 cut(s)	447
BspACI	CCGC	4 cut(s)	1107, 2038, 2090, 2092
BspANI	GGCC	4 cut(s)	269, 716, 1427, 1916
BspCNI	CTCAG	7 cut(s)	255, 433, 594, 1030, 1330, 1399, 1950
BspFNI	CGCG	1 cut(s)	2092
BspLI	GGNNCC	1 cut(s)	1463
BspMAI	CTGCAG	3 cut(s)	1458, 1516, 1605
BspQI	GCTCTTC	5 cut(s)	503, 570, 853, 1146, 2100
BspT104I	TTCGAA	1 cut(s)	1721
BspTI	CTTAAG	1 cut(s)	1480
BsrFI	RCCGGY	1 cut(s)	1499
BsrI	ACTGG	4 cut(s)	300, 507, 1281, 1785
BssAI	RCCGGY	1 cut(s)	1499
BssECI	CCNNGG	4 cut(s)	447, 1563, 2022, 2090
BssMI	GATC	2 cut(s)	1410, 1651
BssNI	GRCGYC	1 cut(s)	1620
BssSI	CACGAG	1 cut(s)	1201
BssT1I	CCWWGG	2 cut(s)	447, 2022
Bst2BI	CACGAG	1 cut(s)	1201
Bst2UI	CCWGG	5 cut(s)	106, 121, 161, 1565, 1760
Bst4CI	ACNGT	3 cut(s)	1021, 1377, 2119
Bst6I	CTCTTC	8 cut(s)	58, 503, 570, 853, 1049, 1146, 1979, 2100
BstACI	GRCGYC	1 cut(s)	1620
BstAFI	CTTAAG	1 cut(s)	1480
BstAPI	GCANNNNNTGC	2 cut(s)	410, 1580
BstBI	TTCGAA	1 cut(s)	1721
BstC8I	GCNNGC	4 cut(s)	554, 628, 1509, 1601
BstDSI	CCRYGG	2 cut(s)	447, 2090
BstENI	CCTNNNNNAGG	4 cut(s)	103, 158, 1469, 1604
BstF5I	GGATG	7 cut(s)	149, 916, 1051, 1100, 1132, 1789, 1978
BstFNI	CGCG	1 cut(s)	2092
BstH2I	RGCGCY	1 cut(s)	10
BstHHI	GCGC	2 cut(s)	9, 159
BstKTI	GATC	2 cut(s)	1413, 1654
BstMAI	GTCTC	4 cut(s)	363, 1740, 1749, 1948
BstMBI	GATC	2 cut(s)	1410, 1651
BstNI	CCWGG	5 cut(s)	106, 121, 161, 1565, 1760
BstSCI	CCNGG	5 cut(s)	104, 119, 159, 1563, 1758
BstSFI	CTRYAG	4 cut(s)	779, 1454, 1512, 1601
BstSLI	GKGCMC	3 cut(s)	251, 406, 1394
BstUI	CGCG	1 cut(s)	2092
BstV2I	GAAGAC	3 cut(s)	470, 1103, 1541
BstX2I	RGATCY	1 cut(s)	1410
BstXI	CCANNNNNNTGG	1 cut(s)	1780
BstYI	RGATCY	1 cut(s)	1410
BsuRI	GGCC	4 cut(s)	269, 716, 1427, 1916
BtgI	CCRYGG	2 cut(s)	447, 2090
BtsCI	GGATG	7 cut(s)	149, 916, 1051, 1100, 1132, 1789, 1978
BtsI	GCAGTG	1 cut(s)	249
BtsIMutI	CAGTG	6 cut(s)	249, 293, 438, 500, 1778, 2115
Cac8I	GCNNGC	4 cut(s)	554, 628, 1509, 1601
CfoI	GCGC	2 cut(s)	9, 159
Cfr10I	RCCGGY	1 cut(s)	1499
Cfr13I	GGNCC	2 cut(s)	714, 1915
Cfr42I	CCGCGG	1 cut(s)	2093
CseI	GACGC	1 cut(s)	1893
Csp6I	GTAC	4 cut(s)	618, 734, 1314, 1808
CviAII	CATG	3 cut(s)	448, 1927, 1951
CviQI	GTAC	4 cut(s)	618, 734, 1314, 1808
DpnI	GATC	2 cut(s)	1412, 1653
DpnII	GATC	2 cut(s)	1410, 1651
DraI	TTTAAA	1 cut(s)	1686
DriI	GACNNNNNGTC	1 cut(s)	1732
EaeI	YGGCCR	1 cut(s)	267
Eam1104I	CTCTTC	8 cut(s)	58, 503, 570, 853, 1049, 1146, 1979, 2100
Eam1105I	GACNNNNNGTC	1 cut(s)	1732
EarI	CTCTTC	8 cut(s)	58, 503, 570, 853, 1049, 1146, 1979, 2100
Eco130I	CCWWGG	2 cut(s)	447, 2022
Eco57I	CTGAAG	3 cut(s)	1115, 1145, 2124
Eco88I	CYCGRG	2 cut(s)	1236, 1917
EcoNI	CCTNNNNNAGG	4 cut(s)	103, 158, 1469, 1604
EcoRI	GAATTC	1 cut(s)	583
EcoRII	CCWGG	5 cut(s)	104, 119, 159, 1563, 1758
EcoT14I	CCWWGG	2 cut(s)	447, 2022
ErhI	CCWWGG	2 cut(s)	447, 2022
FaeI	CATG	3 cut(s)	451, 1930, 1954
FalI	AAGNNNNNCTT	6 cut(s)	720, 752, 1143, 1175, 1333, 1365
FaqI	GGGAC	2 cut(s)	1546, 1867
FatI	CATG	3 cut(s)	447, 1926, 1950
FauI	CCCGC	1 cut(s)	2085
FokI	GGATG	7 cut(s)	136, 923, 1058, 1087, 1139, 1796, 1985
FspBI	CTAG	6 cut(s)	530, 917, 1110, 1416, 1673, 1848
GlaI	GCGC	2 cut(s)	8, 158
GsaI	CCCAGC	1 cut(s)	1440
GsuI	CTGGAG	4 cut(s)	88, 317, 1727, 2000
HaeII	RGCGCY	1 cut(s)	10
HaeIII	GGCC	4 cut(s)	269, 716, 1427, 1916
HapII	CCGG	2 cut(s)	717, 1500
HgaI	GACGC	1 cut(s)	1893
HhaI	GCGC	2 cut(s)	9, 159
Hin1I	GRCGYC	1 cut(s)	1620
Hin1II	CATG	3 cut(s)	451, 1930, 1954
Hin6I	GCGC	2 cut(s)	7, 157
HinP1I	GCGC	2 cut(s)	7, 157
HincII	GTYRAC	2 cut(s)	417, 1618
HindII	GTYRAC	2 cut(s)	417, 1618
HindIII	AAGCTT	3 cut(s)	628, 1178, 1347
HinfI	GANTC	6 cut(s)	167, 418, 455, 518, 1291, 1448
HpaII	CCGG	2 cut(s)	717, 1500
HphI	GGTGA	6 cut(s)	71, 545, 662, 1499, 1514, 2039
Hpy166II	GTNNAC	6 cut(s)	404, 417, 536, 1392, 1618, 1876
Hpy188I	TCNGA	6 cut(s)	427, 808, 934, 1039, 1194, 1296
Hpy8I	GTNNAC	6 cut(s)	404, 417, 536, 1392, 1618, 1876
Hpy99I	CGWCG	3 cut(s)	139, 179, 401
HpyAV	CCTTC	9 cut(s)	254, 745, 780, 871, 943, 1237, 1249, 1757, 1997
HpyCH4III	ACNGT	3 cut(s)	1021, 1377, 2119
HpyCH4IV	ACGT	3 cut(s)	137, 1591, 1620
HpySE526I	ACGT	3 cut(s)	137, 1591, 1620
Hsp92I	GRCGYC	1 cut(s)	1620
Hsp92II	CATG	3 cut(s)	451, 1930, 1954
HspAI	GCGC	2 cut(s)	7, 157
KspI	CCGCGG	1 cut(s)	2093
Kzo9I	GATC	2 cut(s)	1410, 1651
LguI	GCTCTTC	5 cut(s)	503, 570, 853, 1146, 2100
LmnI	GCTCC	7 cut(s)	338, 549, 670, 1396, 1461, 1546, 2128
LweI	GCATC	6 cut(s)	158, 433, 1117, 1480, 1621, 2024
MaeI	CTAG	6 cut(s)	530, 917, 1110, 1416, 1673, 1848
MaeII	ACGT	3 cut(s)	137, 1591, 1620
MaeIII	GTNAC	1 cut(s)	2113
MalI	GATC	2 cut(s)	1412, 1653
MboI	GATC	2 cut(s)	1410, 1651
MfeI	CAATTG	2 cut(s)	621, 768
MflI	RGATCY	1 cut(s)	1410
MhlI	GDGCHC	4 cut(s)	251, 343, 406, 1394
MlsI	TGGCCA	1 cut(s)	269
MluNI	TGGCCA	1 cut(s)	269
MlyI	GAGTC	2 cut(s)	161, 412
MmeI	TCCRAC	1 cut(s)	405
Mox20I	TGGCCA	1 cut(s)	269
MscI	TGGCCA	1 cut(s)	269
MseI	TTAA	6 cut(s)	675, 696, 1031, 1370, 1481, 1685
Msp20I	TGGCCA	1 cut(s)	269
MspA1I	CMGCKG	1 cut(s)	2092
MspCI	CTTAAG	1 cut(s)	1480
MspI	CCGG	2 cut(s)	717, 1500
MspR9I	CCNGG	5 cut(s)	106, 121, 161, 1565, 1760
MunI	CAATTG	2 cut(s)	621, 768
Mva1269I	GAATGC	2 cut(s)	115, 1018
MvaI	CCWGG	5 cut(s)	106, 121, 161, 1565, 1760
MvnI	CGCG	1 cut(s)	2092
NcoI	CCATGG	1 cut(s)	447
NdeII	GATC	2 cut(s)	1410, 1651
NlaIII	CATG	3 cut(s)	451, 1930, 1954
NlaIV	GGNNCC	1 cut(s)	1463
NmeAIII	GCCGAG	1 cut(s)	1453
NmuCI	GTSAC	1 cut(s)	2113
NspV	TTCGAA	1 cut(s)	1721
PciSI	GCTCTTC	5 cut(s)	503, 570, 853, 1146, 2100
PctI	GAATGC	2 cut(s)	115, 1018
PfeI	GAWTC	4 cut(s)	455, 518, 1291, 1448
PflFI	GACNNNGTC	1 cut(s)	421
PfoI	TCCNGGA	1 cut(s)	104
PleI	GAGTC	2 cut(s)	161, 412
PpsI	GAGTC	2 cut(s)	161, 412
Psp6I	CCWGG	5 cut(s)	104, 119, 159, 1563, 1758
PspFI	CCCAGC	1 cut(s)	1436
PspGI	CCWGG	5 cut(s)	104, 119, 159, 1563, 1758
PspN4I	GGNNCC	1 cut(s)	1463
PspPI	GGNCC	2 cut(s)	714, 1915
PsrI	GAACNNNNNNTAC	2 cut(s)	370, 402
PstI	CTGCAG	3 cut(s)	1458, 1516, 1605
PsuI	RGATCY	1 cut(s)	1410
PsyI	GACNNNGTC	1 cut(s)	421
RsaI	GTAC	4 cut(s)	619, 735, 1315, 1809
RsaNI	GTAC	4 cut(s)	618, 734, 1314, 1808
SacII	CCGCGG	1 cut(s)	2093
SapI	GCTCTTC	5 cut(s)	503, 570, 853, 1146, 2100
SaqAI	TTAA	6 cut(s)	675, 696, 1031, 1370, 1481, 1685
Sau3AI	GATC	2 cut(s)	1410, 1651
Sau96I	GGNCC	2 cut(s)	714, 1915
SbfI	CCTGCAGG	1 cut(s)	1605
ScaI	AGTACT	1 cut(s)	1315
SchI	GAGTC	2 cut(s)	161, 412
ScrFI	CCNGG	5 cut(s)	106, 121, 161, 1565, 1760
SdaI	CCTGCAGG	1 cut(s)	1605
SduI	GDGCHC	4 cut(s)	251, 343, 406, 1394
SfaNI	GCATC	6 cut(s)	158, 433, 1117, 1480, 1621, 2024
SfcI	CTRYAG	4 cut(s)	779, 1454, 1512, 1601
Sfr303I	CCGCGG	1 cut(s)	2093
SfuI	TTCGAA	1 cut(s)	1721
SgrBI	CCGCGG	1 cut(s)	2093
SmlI	CTYRAG	2 cut(s)	1307, 1480
SmoI	CTYRAG	2 cut(s)	1307, 1480
Sse8387I	CCTGCAGG	1 cut(s)	1605
SsiI	CCGC	4 cut(s)	1107, 2038, 2090, 2092
SspI	AATATT	1 cut(s)	2034
SspMI	CTAG	6 cut(s)	530, 917, 1110, 1416, 1673, 1848
StyD4I	CCNGG	5 cut(s)	104, 119, 159, 1563, 1758
StyI	CCWWGG	2 cut(s)	447, 2022
TaaI	ACNGT	3 cut(s)	1021, 1377, 2119
TaiI	ACGT	3 cut(s)	140, 1594, 1623
TaqI	TCGA	3 cut(s)	453, 1002, 1721
TatI	WGTACW	2 cut(s)	617, 1313
TauI	GCSGC	1 cut(s)	2041
TfiI	GAWTC	4 cut(s)	455, 518, 1291, 1448
Tru1I	TTAA	6 cut(s)	675, 696, 1031, 1370, 1481, 1685
Tru9I	TTAA	6 cut(s)	675, 696, 1031, 1370, 1481, 1685
TscAI	CASTG	6 cut(s)	256, 300, 445, 507, 1785, 2122
TseFI	GTSAC	1 cut(s)	2113
Tsp45I	GTSAC	1 cut(s)	2113
TspDTI	ATGAA	5 cut(s)	476, 531, 927, 1020, 1299
TspGWI	ACGGA	3 cut(s)	562, 1409, 1928
TspRI	CASTG	6 cut(s)	256, 300, 445, 507, 1785, 2122
Tth111I	GACNNNGTC	1 cut(s)	421
Vha464I	CTTAAG	1 cut(s)	1480
VneI	GTGCAC	2 cut(s)	402, 1390
XagI	CCTNNNNNAGG	4 cut(s)	103, 158, 1469, 1604
XapI	RAATTY	7 cut(s)	583, 678, 745, 991, 1249, 1260, 1382
XcmI	CCANNNNNNNNNTGG	1 cut(s)	445
XspI	CTAG	6 cut(s)	530, 917, 1110, 1416, 1673, 1848
ZraI	GACGTC	1 cut(s)	1621
ZrmI	AGTACT	1 cut(s)	1315

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.