Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003650

Physical Location & Seq

Genomic Coordinates Reverse (-)

55569832 .. 55574396

Gene Structure 4565 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ50849

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2115 bp

ATGGGGTTTGCAATGGGGAGCACTTGCTTCCTACACTCTCCCTTCCCTCACTCTCGATTTCCCTTTTCTTCTTCTTCTCATTCCAAAACCAGAAATGCAGAGACCAACGCAAGAAGAAACAGAACAAGAGTGCCAATGTCGTCTCTGCGCCAAGAGGACCTCAACGACGGCGATCATGGCAAGAGGAGGGCTATTCTCTTTGTGGGTATCTCAGTTCTTCCACTATTGCATCTCAGGGCTCATGCTTTTGAAGCCTTTCCCGCTAAAGAAATTGAGCCAAAGACTCCAGACAAGAACATAAAGGCAGAGGGACTGCAAGGAGATGCAGCACCAAATCCCATTTTGTCTATCCTGAATGGTATTGGTATTTTCAGCTCTGGTGTCATCGGTGCGTTTTATGGATTGGCTCAGAAAGAAAAGAAAGCTACTGATGCAATAGTAGAATCTATGAAGAACCAGCTGAAAGAAAAGGAAGCTGCTATTGCTTCATTGGAGAAGAACTTTGAATCCAAGCTACTGGATGAACAGGAAGAAAGGAGCAAGCAACTTGGAAAGGCAAAGGAAGAGCAGAGGTCTCTAACAGACCAACTAAATTCAGCAAAGAGTACTATTGTGGACCTAGGGAAGGAGCTAAATAGTGAGAAGAAGTTGATTGAGGAGCTTAAAATTCAAAGTGAAAGCCTTAAAACAAACCTTTCAAAGGCTATCGAAGATAAGGTAGAGCTTGAAGAAAGTTTGAAGGCAAAGCTCCACTCGATCGAAGATTTGCAGGGAAGGATTAATTTACTCAATTCAGAACTGAAGGACAGAGAAAGTAATGTTCGAAGCCTTAGCTCTTCTCTCGCAGAAAAGGATTTGGAGTTGAAGGACTTAAAAACTACCTACAAGCAAACTAGGGATGAACTAGCTCATGCAGTTTCAGATATTCAACAATTAAAAGTTGAACTCCTGAAGAATCAAAAGGAATTGGAATTGAAGAGTTCCACTGTGGATGAATTGAATTCAACAGTAAGTTCTTTGTCTTCTGAGAAAGGTGATTTTAAGAGGAAGCTTGATGCTATTCAGGAGGAATACAATAATCTGAAATCATCCTCTGGAAAAAAGGCAGCTTTGGATGCTAAGCTTTTGGGAGAAAAAGATGAGGCCCTTCAGCTGCTAAAGGAAAAACTTGAGCTTGCATTGACTGACTCAAGTAGAAGCAAACAGATAACTGCTGATTTGACCCGAGAGAAGGAAACCTTGAGGGAAACGTTGGATAATGCATTGAACAGTGAAGAGAGCTTGAAACATGAACTCCACATCACTCAGGAAGCTCTTGGAAAATCTAGAAATGAAGCTTCGAATCTGGAACATCAATTAAAACAGTCAAAAATTTGTTTTACTGGAGTTAGGGAATCACTGCAGAGGAGCCTAGATGAGGCTACATCAAGTGGTGACGTGATTGCTACTGAGCTTGCTGCAGTGAAAGAACTTCTAAAGAAGACAGAAGAGGAGCTGCAAAGTGTGTCTCATCAACTAGCAGCTGTTGCAGAAAATCATGATAGCCTGCAGAATGAATTGGTTGATGTATATAAAACAGCTGCCAAAGCTTCTAATGATTTAAAAGAAGAGAAGGAGCGAGTTTCTTCTCTTAAAAAAGAACTTCAAACTCTGGAGAAGCAAATCTCAGAGAACAAGAAGTCCCAGAAGTCTCTTGAGACAGACCTGGAAGAGGCTACAAAGTCACTTGATGAGATGAACCGAAATGCATTAATACTTTCCAAAGAGTTAGAGAAGGCTAATTCTCTAATTTCTAACCTTGAAGATGAGAAAGAGGTGTTTTACAAGTCCCTAAAAGAGCAAAAGACTGCATCCAAAGAGGCACGTGAAAATATGGAAGATGCCCATAATCTTGTCATGAAACTTGGCAAGGAAAGGGAGAGTCTGGAGAAGAGAGCAAAGAAAATGGAAGAGGAGTTGGCATCTGCCAAGGGTGAAATATTGCGGCTGAGGAGTAAAATAAAATCGTCTAAAGATCTTGTAAATAATGAGAAACCACAGAAAGTTGAGGCTGAAGGTGCTGTCACTGTTACTGCAAAGAGAGGTAGGAGGAGAAAGGCTGCTGAATCAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0009295 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0016020 GO:0016363 GO:0031974 GO:0031976 GO:0031981 GO:0031984 GO:0034357 GO:0034399 GO:0042646 GO:0042651 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035 GO:0070013 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

704

Amino Acids

78.81

Weight (kDa)

6.29

Isoelectric Point (pI)

49.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CCDC39	PF24161	468 - 685	1e-05	Coiled-coil domain-containing protein 39

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003650)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16000
fragaria_vesca	FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081
malus_domestica	MD09G1212900.v1.1 MD09G1213300.v1.1 MD09G1213400.v1.1 MD09G1213500.v1.1 MD09G1213800.v1.1 MD17G1195700.v1.1
prunus_persica	Prupe.3G071700_v2.0.a1
pyrus_communis	pycom09g13050 pycom17g20130 pycom17g20140
rosa_chinensis	RchiOBHm_Chr2g0137781
rosa_laevigata	RLG00000019675
rosa_multiflora	Rmu_sc0008635.1_g000002
rosa_roxburghii	Rroxscaffold_2G00106850
rosa_rugosa	Rorug02G0345400 Rorug02G0345500 Rorug02G0345600 Rorug02G0345600 Rorug02G0345700 Rorug02G0345700
rosa_samantha	Rh2AG392700 Rh2BG400400 Rh2CG379400 Rh2DG415300
rosa_wichuraiana	Rw2G032170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	261, 1984
AclI	AACGTT	1 cut(s)	1250
AcsI	RAATTY	4 cut(s)	592, 666, 1000, 1371
AcuI	CTGAAG	4 cut(s)	821, 971, 1133, 2073
AcvI	CACGTG	1 cut(s)	1865
AfaI	GTAC	1 cut(s)	607
AfiI	CCNNNNNNNGG	5 cut(s)	625, 700, 1231, 1417, 1711
AjiI	CACGTC	1 cut(s)	1438
AjnI	CCWGG	1 cut(s)	1704
AloI	GAACNNNNNNTCC	4 cut(s)	491, 523, 1664, 1696
Alw21I	GWGCWC	1 cut(s)	23
Alw26I	GTCTC	6 cut(s)	95, 147, 579, 1512, 1691, 1695
Ama87I	CYCGRG	1 cut(s)	1224
AoxI	GGCC	1 cut(s)	1143
ApeKI	GCWGC	9 cut(s)	326, 476, 1106, 1153, 1457, 1495, 1520, 1580, 2099
ApoI	RAATTY	4 cut(s)	592, 666, 1000, 1371
AseI	ATTAAT	2 cut(s)	780, 1751
Asp700I	GAANNNNTTC	1 cut(s)	255
AspA2I	CCTAGG	1 cut(s)	619
AspLEI	GCGC	1 cut(s)	150
AspS9I	GGNCC	3 cut(s)	157, 616, 1144
AsuHPI	GGTGA	3 cut(s)	1046, 1445, 1985
AsuII	TTCGAA	2 cut(s)	823, 1340
AvaI	CYCGRG	1 cut(s)	1224
AvaII	GGWCC	2 cut(s)	157, 616
AvrII	CCTAGG	1 cut(s)	619
BanII	GRGCYC	1 cut(s)	241
BbrPI	CACGTG	1 cut(s)	1865
BbsI	GAAGAC	2 cut(s)	1014, 1487
Bbv12I	GWGCWC	1 cut(s)	23
BbvCI	CCTCAGC	1 cut(s)	1988
BbvI	GCAGC	9 cut(s)	338, 463, 1118, 1140, 1444, 1482, 1532, 1567, 2086
BceAI	ACGGC	1 cut(s)	184
BciT130I	CCWGG	1 cut(s)	1706
BcoDI	GTCTC	6 cut(s)	95, 147, 579, 1512, 1691, 1695
BfaI	CTAG	6 cut(s)	620, 894, 905, 1326, 1412, 1517
BfmI	CTRYAG	3 cut(s)	1400, 1458, 1547
BglII	AGATCT	1 cut(s)	2014
BlnI	CCTAGG	1 cut(s)	619
BlpI	GCTNAGC	1 cut(s)	1119
BmcAI	AGTACT	1 cut(s)	607
Bme1390I	CCNGG	1 cut(s)	1706
Bme18I	GGWCC	2 cut(s)	157, 616
BmeT110I	CYCGRG	1 cut(s)	1224
BmgBI	CACGTC	1 cut(s)	1438
BmgT120I	GGNCC	3 cut(s)	157, 616, 1144
BmiI	GGNNCC	1 cut(s)	1409
BmrFI	CCNGG	1 cut(s)	1706
BmsI	GCATC	8 cut(s)	238, 313, 421, 1045, 1105, 1859, 1870, 1970
BpiI	GAAGAC	2 cut(s)	1014, 1487
BpmI	CTGGAG	4 cut(s)	270, 1404, 1673, 1946
Bpu10I	CCTNAGC	2 cut(s)	830, 1988
Bpu1102I	GCTNAGC	1 cut(s)	1119
Bpu14I	TTCGAA	2 cut(s)	823, 1340
BpuEI	CTTGAG	4 cut(s)	1174, 1190, 1261, 1715
BsaAI	YACGTR	1 cut(s)	1865
BsaI	GGTCTC	2 cut(s)	95, 579
BsaJI	CCNNGG	2 cut(s)	619, 1968
BsaXI	ACNNNNNCTCC	2 cut(s)	1278, 1308
Bsc4I	CCNNNNNNNGG	5 cut(s)	625, 700, 1231, 1417, 1711
Bse1I	ACTGG	2 cut(s)	522, 1387
Bse3DI	GCAATG	1 cut(s)	18
BseBI	CCWGG	1 cut(s)	1706
BseDI	CCNNGG	2 cut(s)	619, 1968
BseGI	GGATG	6 cut(s)	526, 904, 997, 1088, 1120, 1850
BseLI	CCNNNNNNNGG	5 cut(s)	625, 700, 1231, 1417, 1711
BseMI	GCAATG	1 cut(s)	18
BseMII	CTCAG	8 cut(s)	225, 247, 422, 1017, 1319, 1440, 1680, 1979
BseNI	ACTGG	2 cut(s)	522, 1387
BseRI	GAGGAG	7 cut(s)	199, 671, 1420, 1505, 1967, 2005, 2104
BseXI	GCAGC	9 cut(s)	338, 463, 1118, 1140, 1444, 1482, 1532, 1567, 2086
Bsh1285I	CGRYCG	1 cut(s)	759
BshFI	GGCC	1 cut(s)	1145
BsiEI	CGRYCG	1 cut(s)	759
BsiHKAI	GWGCWC	1 cut(s)	23
BsiHKCI	CYCGRG	1 cut(s)	1224
BslFI	GGGAC	3 cut(s)	324, 1666, 1813
BslI	CCNNNNNNNGG	5 cut(s)	625, 700, 1231, 1417, 1711
BsmAI	GTCTC	6 cut(s)	95, 147, 579, 1512, 1691, 1695
BsmBI	CGTCTC	1 cut(s)	147
BsmFI	GGGAC	3 cut(s)	324, 1666, 1813
BsnI	GGCC	1 cut(s)	1145
Bso31I	GGTCTC	2 cut(s)	95, 579
BsoBI	CYCGRG	1 cut(s)	1224
Bsp119I	TTCGAA	2 cut(s)	823, 1340
Bsp1286I	GDGCHC	2 cut(s)	23, 241
Bsp143I	GATC	3 cut(s)	172, 756, 2014
Bsp1720I	GCTNAGC	1 cut(s)	1119
BspACI	CCGC	2 cut(s)	261, 1984
BspANI	GGCC	1 cut(s)	1145
BspCNI	CTCAG	8 cut(s)	224, 246, 421, 1018, 1318, 1441, 1679, 1980
BspHI	TCATGA	2 cut(s)	1537, 1896
BspLI	GGNNCC	1 cut(s)	1409
BspMAI	CTGCAG	3 cut(s)	1404, 1462, 1551
BspQI	GCTCTTC	2 cut(s)	558, 841
BspT104I	TTCGAA	2 cut(s)	823, 1340
BspTNI	GGTCTC	2 cut(s)	95, 579
BsrDI	GCAATG	1 cut(s)	18
BsrI	ACTGG	2 cut(s)	522, 1387
BssECI	CCNNGG	2 cut(s)	619, 1968
BssMI	GATC	3 cut(s)	172, 756, 2014
BssT1I	CCWWGG	2 cut(s)	619, 1968
Bst2UI	CCWGG	1 cut(s)	1706
Bst4CI	ACNGT	5 cut(s)	988, 1009, 1271, 1365, 2068
Bst6I	CTCTTC	9 cut(s)	558, 841, 971, 1269, 1482, 1602, 1704, 1925, 1944
BstAPI	GCANNNNNTGC	1 cut(s)	1526
BstBAI	YACGTR	1 cut(s)	1865
BstBI	TTCGAA	2 cut(s)	823, 1340
BstC8I	GCNNGC	4 cut(s)	542, 1176, 1455, 1547
BstENI	CCTNNNNNAGG	4 cut(s)	623, 698, 1415, 1709
BstF5I	GGATG	6 cut(s)	526, 904, 997, 1088, 1120, 1850
BstHHI	GCGC	1 cut(s)	150
BstKTI	GATC	3 cut(s)	175, 759, 2017
BstMAI	GTCTC	6 cut(s)	95, 147, 579, 1512, 1691, 1695
BstMBI	GATC	3 cut(s)	172, 756, 2014
BstMCI	CGRYCG	1 cut(s)	759
BstMWI	GCNNNNNNNGC	9 cut(s)	177, 251, 260, 431, 482, 1115, 1526, 1586, 2057
BstNI	CCWGG	1 cut(s)	1706
BstSCI	CCNGG	1 cut(s)	1704
BstSFI	CTRYAG	3 cut(s)	1400, 1458, 1547
BstV1I	GCAGC	9 cut(s)	338, 463, 1118, 1140, 1444, 1482, 1532, 1567, 2086
BstV2I	GAAGAC	2 cut(s)	1014, 1487
BstX2I	RGATCY	1 cut(s)	2014
BstXI	CCANNNNNNTGG	1 cut(s)	517
BstYI	RGATCY	1 cut(s)	2014
BsuRI	GGCC	1 cut(s)	1145
BtrI	CACGTC	1 cut(s)	1438
BtsCI	GGATG	6 cut(s)	526, 904, 997, 1088, 1120, 1850
BtsI	GCAGTG	2 cut(s)	1397, 1467
BtsIMutI	CAGTG	5 cut(s)	984, 1276, 1397, 1467, 2064
Cac8I	GCNNGC	4 cut(s)	542, 1176, 1455, 1547
CciI	TCATGA	2 cut(s)	1537, 1896
CfoI	GCGC	1 cut(s)	150
Cfr13I	GGNCC	3 cut(s)	157, 616, 1144
Csp6I	GTAC	1 cut(s)	606
CviAII	CATG	6 cut(s)	176, 242, 911, 1289, 1538, 1897
CviQI	GTAC	1 cut(s)	606
DpnI	GATC	3 cut(s)	174, 758, 2016
DpnII	GATC	3 cut(s)	172, 756, 2014
DraI	TTTAAA	1 cut(s)	1602
Eam1104I	CTCTTC	9 cut(s)	558, 841, 971, 1269, 1482, 1602, 1704, 1925, 1944
EarI	CTCTTC	9 cut(s)	558, 841, 971, 1269, 1482, 1602, 1704, 1925, 1944
Eco130I	CCWWGG	2 cut(s)	619, 1968
Eco24I	GRGCYC	1 cut(s)	241
Eco31I	GGTCTC	2 cut(s)	95, 579
Eco47I	GGWCC	2 cut(s)	157, 616
Eco57I	CTGAAG	4 cut(s)	821, 971, 1133, 2073
Eco72I	CACGTG	1 cut(s)	1865
Eco88I	CYCGRG	1 cut(s)	1224
EcoNI	CCTNNNNNAGG	4 cut(s)	623, 698, 1415, 1709
EcoO109I	RGGNCCY	2 cut(s)	157, 1144
EcoRI	GAATTC	1 cut(s)	1000
EcoRII	CCWGG	1 cut(s)	1704
EcoT14I	CCWWGG	2 cut(s)	619, 1968
EcoT22I	ATGCAT	2 cut(s)	1264, 1750
EcoT38I	GRGCYC	1 cut(s)	241
ErhI	CCWWGG	2 cut(s)	619, 1968
Esp3I	CGTCTC	1 cut(s)	147
FaeI	CATG	6 cut(s)	179, 245, 914, 1292, 1541, 1900
FalI	AAGNNNNNCTT	2 cut(s)	1223, 1255
FaqI	GGGAC	3 cut(s)	324, 1666, 1813
FatI	CATG	6 cut(s)	175, 241, 910, 1288, 1537, 1896
FauI	CCCGC	1 cut(s)	268
FokI	GGATG	6 cut(s)	533, 911, 1004, 1075, 1127, 1837
FriOI	GRGCYC	1 cut(s)	241
FspBI	CTAG	6 cut(s)	620, 894, 905, 1326, 1412, 1517
GlaI	GCGC	1 cut(s)	149
GsuI	CTGGAG	4 cut(s)	270, 1404, 1673, 1946
HaeIII	GGCC	1 cut(s)	1145
HhaI	GCGC	1 cut(s)	150
Hin1II	CATG	6 cut(s)	179, 245, 914, 1292, 1541, 1900
Hin6I	GCGC	1 cut(s)	148
HinP1I	GCGC	1 cut(s)	148
HindIII	AAGCTT	4 cut(s)	1049, 1121, 1335, 1587
HinfI	GANTC	9 cut(s)	283, 443, 506, 955, 1187, 1342, 1394, 1921, 2105
HphI	GGTGA	3 cut(s)	1046, 1445, 1985
Hpy166II	GTNNAC	1 cut(s)	616
Hpy188I	TCNGA	7 cut(s)	411, 796, 922, 1027, 1083, 1669, 2110
Hpy8I	GTNNAC	1 cut(s)	616
Hpy99I	CGWCG	1 cut(s)	170
HpyCH4III	ACNGT	5 cut(s)	988, 1009, 1271, 1365, 2068
HpyCH4IV	ACGT	3 cut(s)	1250, 1437, 1864
HpyF10VI	GCNNNNNNNGC	9 cut(s)	177, 251, 260, 431, 482, 1115, 1526, 1586, 2057
HpySE526I	ACGT	3 cut(s)	1250, 1437, 1864
Hsp92II	CATG	6 cut(s)	179, 245, 914, 1292, 1541, 1900
HspAI	GCGC	1 cut(s)	148
Kzo9I	GATC	3 cut(s)	172, 756, 2014
LguI	GCTCTTC	2 cut(s)	558, 841
LmnI	GCTCC	8 cut(s)	18, 537, 628, 658, 753, 1407, 1492, 1615
Lsp1109I	GCAGC	9 cut(s)	338, 463, 1118, 1140, 1444, 1482, 1532, 1567, 2086
LweI	GCATC	8 cut(s)	238, 313, 421, 1045, 1105, 1859, 1870, 1970
MaeI	CTAG	6 cut(s)	620, 894, 905, 1326, 1412, 1517
MaeII	ACGT	3 cut(s)	1250, 1437, 1864
MaeIII	GTNAC	4 cut(s)	1433, 1722, 2062, 2068
MalI	GATC	3 cut(s)	174, 758, 2016
MboI	GATC	3 cut(s)	172, 756, 2014
MflI	RGATCY	1 cut(s)	2014
MhlI	GDGCHC	2 cut(s)	23, 241
MlyI	GAGTC	3 cut(s)	277, 1181, 1930
MmeI	TCCRAC	1 cut(s)	1233
Mph1103I	ATGCAT	2 cut(s)	1264, 1750
MroXI	GAANNNNTTC	1 cut(s)	255
MspA1I	CMGCKG	4 cut(s)	460, 1153, 1523, 1580
MspR9I	CCNGG	1 cut(s)	1706
MvaI	CCWGG	1 cut(s)	1706
MwoI	GCNNNNNNNGC	9 cut(s)	177, 251, 260, 431, 482, 1115, 1526, 1586, 2057
NdeII	GATC	3 cut(s)	172, 756, 2014
NlaIII	CATG	6 cut(s)	179, 245, 914, 1292, 1541, 1900
NlaIV	GGNNCC	1 cut(s)	1409
NmuCI	GTSAC	3 cut(s)	1433, 1722, 2062
NsiI	ATGCAT	2 cut(s)	1264, 1750
NspV	TTCGAA	2 cut(s)	823, 1340
PagI	TCATGA	2 cut(s)	1537, 1896
PciSI	GCTCTTC	2 cut(s)	558, 841
PdmI	GAANNNNTTC	1 cut(s)	255
PfeI	GAWTC	6 cut(s)	443, 506, 955, 1342, 1394, 2105
Ple19I	CGATCG	1 cut(s)	759
PleI	GAGTC	3 cut(s)	277, 1181, 1929
PmaCI	CACGTG	1 cut(s)	1865
PmlI	CACGTG	1 cut(s)	1865
PpsI	GAGTC	3 cut(s)	277, 1181, 1929
Ppu21I	YACGTR	1 cut(s)	1865
PpuMI	RGGWCCY	1 cut(s)	157
PshBI	ATTAAT	2 cut(s)	780, 1751
Psp1406I	AACGTT	1 cut(s)	1250
Psp5II	RGGWCCY	1 cut(s)	157
Psp6I	CCWGG	1 cut(s)	1704
PspCI	CACGTG	1 cut(s)	1865
PspGI	CCWGG	1 cut(s)	1704
PspN4I	GGNNCC	1 cut(s)	1409
PspPI	GGNCC	3 cut(s)	157, 616, 1144
PspPPI	RGGWCCY	1 cut(s)	157
PstI	CTGCAG	3 cut(s)	1404, 1462, 1551
PsuI	RGATCY	1 cut(s)	2014
PvuI	CGATCG	1 cut(s)	759
PvuII	CAGCTG	4 cut(s)	460, 1153, 1523, 1580
RsaI	GTAC	1 cut(s)	607
RsaNI	GTAC	1 cut(s)	606
SapI	GCTCTTC	2 cut(s)	558, 841
Sau3AI	GATC	3 cut(s)	172, 756, 2014
Sau96I	GGNCC	3 cut(s)	157, 616, 1144
ScaI	AGTACT	1 cut(s)	607
SchI	GAGTC	3 cut(s)	277, 1181, 1930
ScrFI	CCNGG	1 cut(s)	1706
SduI	GDGCHC	2 cut(s)	23, 241
SfaNI	GCATC	8 cut(s)	238, 313, 421, 1045, 1105, 1859, 1870, 1970
SfcI	CTRYAG	3 cut(s)	1400, 1458, 1547
SfuI	TTCGAA	2 cut(s)	823, 1340
SinI	GGWCC	2 cut(s)	157, 616
SmlI	CTYRAG	4 cut(s)	1169, 1189, 1240, 1694
SmoI	CTYRAG	4 cut(s)	1169, 1189, 1240, 1694
SsiI	CCGC	2 cut(s)	261, 1984
SspI	AATATT	1 cut(s)	1980
SspMI	CTAG	6 cut(s)	620, 894, 905, 1326, 1412, 1517
StyD4I	CCNGG	1 cut(s)	1704
StyI	CCWWGG	2 cut(s)	619, 1968
TaaI	ACNGT	5 cut(s)	988, 1009, 1271, 1365, 2068
TaiI	ACGT	3 cut(s)	1253, 1440, 1867
TaqI	TCGA	6 cut(s)	55, 708, 755, 759, 823, 1340
TatI	WGTACW	1 cut(s)	605
TauI	GCSGC	1 cut(s)	1987
TfiI	GAWTC	6 cut(s)	443, 506, 955, 1342, 1394, 2105
TscAI	CASTG	5 cut(s)	991, 1276, 1404, 1467, 2071
TseFI	GTSAC	3 cut(s)	1433, 1722, 2062
TseI	GCWGC	9 cut(s)	326, 476, 1106, 1153, 1457, 1495, 1520, 1580, 2099
Tsp45I	GTSAC	3 cut(s)	1433, 1722, 2062
TspRI	CASTG	5 cut(s)	991, 1276, 1404, 1467, 2071
VpaK11BI	GGWCC	2 cut(s)	157, 616
VspI	ATTAAT	2 cut(s)	780, 1751
XagI	CCTNNNNNAGG	4 cut(s)	623, 698, 1415, 1709
XapI	RAATTY	4 cut(s)	592, 666, 1000, 1371
XbaI	TCTAGA	1 cut(s)	1325
XmaJI	CCTAGG	1 cut(s)	619
XmnI	GAANNNNTTC	1 cut(s)	255
XspI	CTAG	6 cut(s)	620, 894, 905, 1326, 1412, 1517
ZrmI	AGTACT	1 cut(s)	607
Zsp2I	ATGCAT	2 cut(s)	1264, 1750

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.