Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0003650

Physical Location & Seq

Genomic Coordinates Reverse (-)

55312092 .. 55315894

Gene Structure 3803 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019675

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGGGGTTTGCAATGGGGAGCACTTGCTTCTTACACTCTCCCTTCCCTCACTCTCGATTTCCCTTTTCTTCTTCTTCTCATTCCAAAACCAGAAATGCAGAGACCAACGCAAGAAGAAACAGAACAAGAGTGCCAATGTCGTCTCTGCGCCAAGAGGACCTCAACGACGGCGATCATGGCAAGAGGAGGGCTATTCTCTTTGTGGGTATCTCAGTTCTTCCACTATTGCATCTCAGGGCTCATGCTTTTGAAGCCTTTACCACTAAAGAAATTGAGCCAAAGACTCCAGACAAGAACATAAAGGCAGAGCAGGGACTGCAAGGAGATGCAGCACCAAATCCCATTTTGTCTATCCTGAATGGTATTGGTATTTTCAGCTCTGGTGTCATCGGCGCGTTTTATGGATTGGCTCAGAAAGAAAAGAAAGCCACTGATGCAATAGTAGAATCTATGAAGAACCAGCTGAAAGCAAAGGAAGCTGCTATTGCTTCATTGGAGAAGAACTTTGAATCCAAGCTACTGGATGAACAGGAAGAAAGGAGCAAGCAACTTGGAAAGGCAAAGGAAGAGCAGAGGTCTCTAACAGACCAACTAAATTCAGCAAAGAGTACTATTGTGGACCTAGGGAAGGAGCTAAATAGTGAGAAGAAGTTGATTGAGGAGCTTAAAATTCAAAGTGAAAGCCTTAAAACAAACCTTGCAAAGGCTATCGAAGATAAGGTAGATCTTGAAGAAAGTTTGAAGGAAAAGCTCCACTCGATCGAAGATTTGCAGGGAAGGATTAATTTACTCGATTCAGAACTGAAGGACAGAAAAAGTAATGTTCAAGGCCTTAGCTCTTCTCTCGCAGAAAAGGATTTGGAGTTGAAGGAATTAAAAACTACCTACAAGCAAACTAGGGATGAACTAGCTCATGCAGTTTCAGATATTCAACAATTAAAAGTTGAACTCCTGAAGAATCAAAAGGAATTGGAATTGAAGAGTTCCACTGTGGATGAATTGAATTCAACAGTAAGTTCTTTGTCTTCTGAGAAAGATGATTTTAAGAGGAAGCTTGATGCTATTCAGGAGGAATACAATAATCTGAAATCATCCTCTGGAAAAAAGGCAGCTTTGGATGCTAAGCTTTTGGGAGAAAAAGATGAGGCCCTTCTGCTGCTAAAGGAAAAACTCGAGCTTGCATTGACTGACTCAAGTAGAAGCAAACAGATAACTACTGATTTGACCCGAGAGAAGGAAACCTTGAAGGAAATATTGGATAATGCATTGAACAGTGAAGAGAACTTGAAACATGAACTCCACATCACTCAGGAAGCTCTTGGAAAATCTAGAAATGAAGCTTCGAATCTGGAACTTCAATTAAAACAGTCAAAAAATTTGTGTACAGAACTTGAAGCTGAGATCTCTCGGGTTCAGGCTGAGTTTACTGGAGTTAGGGAATCACTGCAGAGGAGCCTTGATGAGGCTACATCAAGTGGTGACGTGATTGCTAATGAGCTTGCTGCAGTGAAAGAACTTCTAAAGAAGACAGAAGAGGAGCTGCAAAGTGTGTCTCATCAACTAGCAGCTGTTGCAGAAAATCGTGATAGCCTGCAGAATGAATTGGTTGATGTATATAAAACAGCTGACAAAGCTTCTAATGATTTAAAAGAAGAGAAGGAGCGAGTTTCTTCTCTTAAAAAAGAACTTCAAACTCTGGAGAAGCAAATCTCAGAGAACAAGAAGTCCCAGAAGTCTCTTGAGACAGACCTGGAAGAGGCTACAAAGTCACTTGATGAGATGAACCGAAATGCATTAATACTTTCCAAAGAGTTAGAGAAGGCTAATTCTCAAATTTCTAACCTTGAAGATGAGAAAGAGGTGTTTTACAAGTCCCTAACAGAGCAAAAGACTGCATCCAAAGAGGCACGTGAAAACATGGAAGATGCCCATAATCTTGTCATGAAACTTGGCAAGGAAAGGGAGAGTCTGGAGAAGAAAGCAAAGAAAATGGAAGGGGAGTTGGCATCTGCCAAGGGTGAAATATTGCGGCTGAGGAGTAAAATAAAATCGTCGAAAGATCTTGTAAATAATGAGAAACCACAGAAAGTTGAGGCTAAAGATGCTGTCACTGTTACTGCAAAGAGAGGTAGGAGGAGAAAGGCTGCCGAATCAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0009295 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0016020 GO:0016363 GO:0031974 GO:0031976 GO:0031981 GO:0031984 GO:0034357 GO:0034399 GO:0042646 GO:0042651 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035 GO:0070013 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

720

Amino Acids

80.55

Weight (kDa)

5.98

Isoelectric Point (pI)

48.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CCDC39	PF24161	529 - 704	9.5e-07	Coiled-coil domain-containing protein 39

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003650)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16000
fragaria_vesca	FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081
malus_domestica	MD09G1212900.v1.1 MD09G1213300.v1.1 MD09G1213400.v1.1 MD09G1213500.v1.1 MD09G1213800.v1.1 MD17G1195700.v1.1
prunus_persica	Prupe.3G071700_v2.0.a1
pyrus_communis	pycom09g13050 pycom17g20130 pycom17g20140
rosa_chinensis	RchiOBHm_Chr2g0137781
rosa_laevigata	RLG00000019675
rosa_multiflora	Rmu_sc0008635.1_g000002
rosa_roxburghii	Rroxscaffold_2G00106850
rosa_rugosa	Rorug02G0345400 Rorug02G0345500 Rorug02G0345600 Rorug02G0345600 Rorug02G0345700 Rorug02G0345700
rosa_samantha	Rh2AG392700 Rh2BG400400 Rh2CG379400 Rh2DG415300
rosa_wichuraiana	Rw2G032170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	395
AciI	CCGC	1 cut(s)	2029
AcsI	RAATTY	5 cut(s)	595, 669, 1003, 1375, 1833
AcuI	CTGAAG	2 cut(s)	824, 974
AcvI	CACGTG	1 cut(s)	1910
AfaI	GTAC	2 cut(s)	610, 1384
AfiI	CCNNNNNNNGG	5 cut(s)	628, 703, 1234, 1462, 1756
AjiI	CACGTC	1 cut(s)	1483
AjnI	CCWGG	1 cut(s)	1749
AjuI	GAANNNNNNNTTGG	2 cut(s)	1238, 1270
AloI	GAACNNNNNNTCC	4 cut(s)	494, 526, 1709, 1741
Alw21I	GWGCWC	1 cut(s)	23
Alw26I	GTCTC	6 cut(s)	95, 147, 582, 1557, 1736, 1740
AlwNI	CAGNNNCTG	1 cut(s)	316
Ama87I	CYCGRG	3 cut(s)	1172, 1227, 1407
AoxI	GGCC	2 cut(s)	829, 1146
ApeKI	GCWGC	8 cut(s)	329, 479, 1109, 1156, 1502, 1540, 1565, 2144
ApoI	RAATTY	5 cut(s)	595, 669, 1003, 1375, 1833
AseI	ATTAAT	2 cut(s)	783, 1796
AspA2I	CCTAGG	1 cut(s)	622
AspLEI	GCGC	2 cut(s)	150, 395
AspS9I	GGNCC	3 cut(s)	157, 619, 1147
AsuHPI	GGTGA	2 cut(s)	1490, 2030
AsuII	TTCGAA	1 cut(s)	1343
AvaI	CYCGRG	3 cut(s)	1172, 1227, 1407
AvaII	GGWCC	2 cut(s)	157, 619
AvrII	CCTAGG	1 cut(s)	622
BanII	GRGCYC	1 cut(s)	241
BbrPI	CACGTG	1 cut(s)	1910
BbsI	GAAGAC	2 cut(s)	1017, 1532
Bbv12I	GWGCWC	1 cut(s)	23
BbvCI	CCTCAGC	1 cut(s)	2033
BbvI	GCAGC	8 cut(s)	341, 466, 1121, 1143, 1489, 1527, 1577, 2131
BceAI	ACGGC	1 cut(s)	184
BciT130I	CCWGG	1 cut(s)	1751
BcoDI	GTCTC	6 cut(s)	95, 147, 582, 1557, 1736, 1740
BfaI	CTAG	5 cut(s)	623, 897, 908, 1329, 1562
BfmI	CTRYAG	3 cut(s)	1445, 1503, 1592
BglII	AGATCT	3 cut(s)	724, 1401, 2059
BisI	GCNGC	9 cut(s)	330, 480, 1110, 1157, 1503, 1541, 1566, 2030, 2145
BlnI	CCTAGG	1 cut(s)	622
BlpI	GCTNAGC	1 cut(s)	1122
BlsI	GCNGC	9 cut(s)	331, 481, 1111, 1158, 1504, 1542, 1567, 2031, 2146
BmcAI	AGTACT	1 cut(s)	610
Bme1390I	CCNGG	1 cut(s)	1751
Bme18I	GGWCC	2 cut(s)	157, 619
BmeT110I	CYCGRG	3 cut(s)	1172, 1227, 1407
BmgBI	CACGTC	1 cut(s)	1483
BmgT120I	GGNCC	3 cut(s)	157, 619, 1147
BmiI	GGNNCC	1 cut(s)	1454
BmrFI	CCNGG	1 cut(s)	1751
BmsI	GCATC	9 cut(s)	238, 316, 424, 1048, 1108, 1904, 1915, 2015, 2092
BpiI	GAAGAC	2 cut(s)	1017, 1532
BpmI	CTGGAG	4 cut(s)	270, 1449, 1718, 1991
Bpu10I	CCTNAGC	2 cut(s)	833, 2033
Bpu1102I	GCTNAGC	1 cut(s)	1122
Bpu14I	TTCGAA	1 cut(s)	1343
BpuEI	CTTGAG	2 cut(s)	1177, 1760
BsaAI	YACGTR	1 cut(s)	1910
BsaI	GGTCTC	2 cut(s)	95, 582
BsaJI	CCNNGG	2 cut(s)	622, 2013
BsaXI	ACNNNNNCTCC	2 cut(s)	1281, 1311
Bsc4I	CCNNNNNNNGG	5 cut(s)	628, 703, 1234, 1462, 1756
Bse1I	ACTGG	2 cut(s)	525, 1432
Bse3DI	GCAATG	1 cut(s)	18
BseBI	CCWGG	1 cut(s)	1751
BseDI	CCNNGG	2 cut(s)	622, 2013
BseGI	GGATG	6 cut(s)	529, 907, 1000, 1091, 1123, 1895
BseLI	CCNNNNNNNGG	5 cut(s)	628, 703, 1234, 1462, 1756
BseMI	GCAATG	1 cut(s)	18
BseMII	CTCAG	9 cut(s)	225, 247, 425, 1020, 1322, 1389, 1410, 1725, 2024
BseNI	ACTGG	2 cut(s)	525, 1432
BseRI	GAGGAG	6 cut(s)	199, 674, 1465, 1550, 2050, 2149
BseXI	GCAGC	8 cut(s)	341, 466, 1121, 1143, 1489, 1527, 1577, 2131
Bsh1236I	CGCG	1 cut(s)	395
Bsh1285I	CGRYCG	1 cut(s)	762
BshFI	GGCC	2 cut(s)	831, 1148
BsiEI	CGRYCG	1 cut(s)	762
BsiHKAI	GWGCWC	1 cut(s)	23
BsiHKCI	CYCGRG	3 cut(s)	1172, 1227, 1407
BslFI	GGGAC	3 cut(s)	327, 1711, 1858
BslI	CCNNNNNNNGG	5 cut(s)	628, 703, 1234, 1462, 1756
BsmAI	GTCTC	6 cut(s)	95, 147, 582, 1557, 1736, 1740
BsmBI	CGTCTC	1 cut(s)	147
BsmFI	GGGAC	3 cut(s)	327, 1711, 1858
BsnI	GGCC	2 cut(s)	831, 1148
Bso31I	GGTCTC	2 cut(s)	95, 582
BsoBI	CYCGRG	3 cut(s)	1172, 1227, 1407
Bsp119I	TTCGAA	1 cut(s)	1343
Bsp1286I	GDGCHC	2 cut(s)	23, 241
Bsp1407I	TGTACA	1 cut(s)	1382
Bsp143I	GATC	5 cut(s)	172, 724, 759, 1401, 2059
Bsp1720I	GCTNAGC	1 cut(s)	1122
BspACI	CCGC	1 cut(s)	2029
BspANI	GGCC	2 cut(s)	831, 1148
BspCNI	CTCAG	9 cut(s)	224, 246, 424, 1021, 1321, 1390, 1411, 1724, 2025
BspFNI	CGCG	1 cut(s)	395
BspHI	TCATGA	1 cut(s)	1941
BspLI	GGNNCC	1 cut(s)	1454
BspMAI	CTGCAG	3 cut(s)	1449, 1507, 1596
BspQI	GCTCTTC	2 cut(s)	561, 844
BspT104I	TTCGAA	1 cut(s)	1343
BspTNI	GGTCTC	2 cut(s)	95, 582
BsrDI	GCAATG	1 cut(s)	18
BsrGI	TGTACA	1 cut(s)	1382
BsrI	ACTGG	2 cut(s)	525, 1432
BssECI	CCNNGG	2 cut(s)	622, 2013
BssMI	GATC	5 cut(s)	172, 724, 759, 1401, 2059
BssT1I	CCWWGG	2 cut(s)	622, 2013
Bst2UI	CCWGG	1 cut(s)	1751
Bst4CI	ACNGT	5 cut(s)	991, 1012, 1274, 1368, 2113
Bst6I	CTCTTC	7 cut(s)	561, 844, 974, 1272, 1527, 1647, 1749
BstAPI	GCANNNNNTGC	2 cut(s)	316, 1571
BstAUI	TGTACA	1 cut(s)	1382
BstBAI	YACGTR	1 cut(s)	1910
BstBI	TTCGAA	1 cut(s)	1343
BstC8I	GCNNGC	4 cut(s)	545, 1179, 1500, 1592
BstENI	CCTNNNNNAGG	4 cut(s)	626, 701, 1460, 1754
BstF5I	GGATG	6 cut(s)	529, 907, 1000, 1091, 1123, 1895
BstFNI	CGCG	1 cut(s)	395
BstHHI	GCGC	2 cut(s)	150, 395
BstKTI	GATC	5 cut(s)	175, 727, 762, 1404, 2062
BstMAI	GTCTC	6 cut(s)	95, 147, 582, 1557, 1736, 1740
BstMBI	GATC	5 cut(s)	172, 724, 759, 1401, 2059
BstMCI	CGRYCG	1 cut(s)	762
BstNI	CCWGG	1 cut(s)	1751
BstSCI	CCNGG	1 cut(s)	1749
BstSFI	CTRYAG	3 cut(s)	1445, 1503, 1592
BstUI	CGCG	1 cut(s)	395
BstV1I	GCAGC	8 cut(s)	341, 466, 1121, 1143, 1489, 1527, 1577, 2131
BstV2I	GAAGAC	2 cut(s)	1017, 1532
BstX2I	RGATCY	3 cut(s)	724, 1401, 2059
BstXI	CCANNNNNNTGG	1 cut(s)	520
BstYI	RGATCY	3 cut(s)	724, 1401, 2059
BsuRI	GGCC	2 cut(s)	831, 1148
BtrI	CACGTC	1 cut(s)	1483
BtsCI	GGATG	6 cut(s)	529, 907, 1000, 1091, 1123, 1895
BtsI	GCAGTG	2 cut(s)	1442, 1512
BtsIMutI	CAGTG	6 cut(s)	429, 987, 1279, 1442, 1512, 2109
Cac8I	GCNNGC	4 cut(s)	545, 1179, 1500, 1592
CaiI	CAGNNNCTG	1 cut(s)	316
CciI	TCATGA	1 cut(s)	1941
CfoI	GCGC	2 cut(s)	150, 395
Cfr13I	GGNCC	3 cut(s)	157, 619, 1147
Csp6I	GTAC	2 cut(s)	609, 1383
CviAII	CATG	6 cut(s)	176, 242, 914, 1292, 1918, 1942
CviQI	GTAC	2 cut(s)	609, 1383
DpnI	GATC	5 cut(s)	174, 726, 761, 1403, 2061
DpnII	GATC	5 cut(s)	172, 724, 759, 1401, 2059
DraI	TTTAAA	1 cut(s)	1647
Eam1104I	CTCTTC	7 cut(s)	561, 844, 974, 1272, 1527, 1647, 1749
EarI	CTCTTC	7 cut(s)	561, 844, 974, 1272, 1527, 1647, 1749
Eco130I	CCWWGG	2 cut(s)	622, 2013
Eco147I	AGGCCT	1 cut(s)	831
Eco24I	GRGCYC	1 cut(s)	241
Eco31I	GGTCTC	2 cut(s)	95, 582
Eco47I	GGWCC	2 cut(s)	157, 619
Eco57I	CTGAAG	2 cut(s)	824, 974
Eco72I	CACGTG	1 cut(s)	1910
Eco88I	CYCGRG	3 cut(s)	1172, 1227, 1407
EcoNI	CCTNNNNNAGG	4 cut(s)	626, 701, 1460, 1754
EcoO109I	RGGNCCY	2 cut(s)	157, 1147
EcoRI	GAATTC	1 cut(s)	1003
EcoRII	CCWGG	1 cut(s)	1749
EcoT14I	CCWWGG	2 cut(s)	622, 2013
EcoT22I	ATGCAT	2 cut(s)	1267, 1795
EcoT38I	GRGCYC	1 cut(s)	241
ErhI	CCWWGG	2 cut(s)	622, 2013
Esp3I	CGTCTC	1 cut(s)	147
FaeI	CATG	6 cut(s)	179, 245, 917, 1295, 1921, 1945
FalI	AAGNNNNNCTT	2 cut(s)	1226, 1258
FaqI	GGGAC	3 cut(s)	327, 1711, 1858
FatI	CATG	6 cut(s)	175, 241, 913, 1291, 1917, 1941
Fnu4HI	GCNGC	9 cut(s)	330, 480, 1110, 1157, 1503, 1541, 1566, 2030, 2145
FokI	GGATG	6 cut(s)	536, 914, 1007, 1078, 1130, 1882
FriOI	GRGCYC	1 cut(s)	241
Fsp4HI	GCNGC	9 cut(s)	330, 480, 1110, 1157, 1503, 1541, 1566, 2030, 2145
FspBI	CTAG	5 cut(s)	623, 897, 908, 1329, 1562
GlaI	GCGC	2 cut(s)	149, 394
GluI	GCNGC	9 cut(s)	330, 480, 1110, 1157, 1503, 1541, 1566, 2030, 2145
GsuI	CTGGAG	4 cut(s)	270, 1449, 1718, 1991
HaeIII	GGCC	2 cut(s)	831, 1148
HhaI	GCGC	2 cut(s)	150, 395
Hin1II	CATG	6 cut(s)	179, 245, 917, 1295, 1921, 1945
Hin6I	GCGC	2 cut(s)	148, 393
HinP1I	GCGC	2 cut(s)	148, 393
HindIII	AAGCTT	4 cut(s)	1052, 1124, 1338, 1632
HphI	GGTGA	2 cut(s)	1490, 2030
Hpy166II	GTNNAC	3 cut(s)	619, 1383, 1425
Hpy188I	TCNGA	7 cut(s)	414, 799, 925, 1030, 1086, 1714, 2155
Hpy8I	GTNNAC	3 cut(s)	619, 1383, 1425
Hpy99I	CGWCG	2 cut(s)	170, 2056
HpyCH4III	ACNGT	5 cut(s)	991, 1012, 1274, 1368, 2113
HpyCH4IV	ACGT	2 cut(s)	1482, 1909
HpySE526I	ACGT	2 cut(s)	1482, 1909
Hsp92II	CATG	6 cut(s)	179, 245, 917, 1295, 1921, 1945
HspAI	GCGC	2 cut(s)	148, 393
Kzo9I	GATC	5 cut(s)	172, 724, 759, 1401, 2059
LguI	GCTCTTC	2 cut(s)	561, 844
LmnI	GCTCC	8 cut(s)	18, 540, 631, 661, 756, 1452, 1537, 1660
Lsp1109I	GCAGC	8 cut(s)	341, 466, 1121, 1143, 1489, 1527, 1577, 2131
LweI	GCATC	9 cut(s)	238, 316, 424, 1048, 1108, 1904, 1915, 2015, 2092
MaeI	CTAG	5 cut(s)	623, 897, 908, 1329, 1562
MaeII	ACGT	2 cut(s)	1482, 1909
MaeIII	GTNAC	4 cut(s)	1478, 1767, 2107, 2113
MalI	GATC	5 cut(s)	174, 726, 761, 1403, 2061
MboI	GATC	5 cut(s)	172, 724, 759, 1401, 2059
MflI	RGATCY	3 cut(s)	724, 1401, 2059
MhlI	GDGCHC	2 cut(s)	23, 241
MlyI	GAGTC	3 cut(s)	277, 1184, 1975
Mph1103I	ATGCAT	2 cut(s)	1267, 1795
MspA1I	CMGCKG	3 cut(s)	463, 1568, 1625
MspR9I	CCNGG	1 cut(s)	1751
MvaI	CCWGG	1 cut(s)	1751
MvnI	CGCG	1 cut(s)	395
NdeII	GATC	5 cut(s)	172, 724, 759, 1401, 2059
NlaIII	CATG	6 cut(s)	179, 245, 917, 1295, 1921, 1945
NlaIV	GGNNCC	1 cut(s)	1454
NmuCI	GTSAC	3 cut(s)	1478, 1767, 2107
NsiI	ATGCAT	2 cut(s)	1267, 1795
NspV	TTCGAA	1 cut(s)	1343
PaeR7I	CTCGAG	1 cut(s)	1172
PagI	TCATGA	1 cut(s)	1941
PceI	AGGCCT	1 cut(s)	831
PciSI	GCTCTTC	2 cut(s)	561, 844
PfeI	GAWTC	7 cut(s)	446, 509, 794, 958, 1345, 1439, 2150
PkrI	GCNGC	9 cut(s)	331, 481, 1111, 1158, 1504, 1542, 1567, 2031, 2146
Ple19I	CGATCG	1 cut(s)	762
PleI	GAGTC	3 cut(s)	277, 1184, 1974
PmaCI	CACGTG	1 cut(s)	1910
PmlI	CACGTG	1 cut(s)	1910
PpsI	GAGTC	3 cut(s)	277, 1184, 1974
Ppu21I	YACGTR	1 cut(s)	1910
PpuMI	RGGWCCY	1 cut(s)	157
PshBI	ATTAAT	2 cut(s)	783, 1796
Psp5II	RGGWCCY	1 cut(s)	157
Psp6I	CCWGG	1 cut(s)	1749
PspCI	CACGTG	1 cut(s)	1910
PspGI	CCWGG	1 cut(s)	1749
PspN4I	GGNNCC	1 cut(s)	1454
PspPI	GGNCC	3 cut(s)	157, 619, 1147
PspPPI	RGGWCCY	1 cut(s)	157
PspXI	VCTCGAGB	1 cut(s)	1172
PstI	CTGCAG	3 cut(s)	1449, 1507, 1596
PstNI	CAGNNNCTG	1 cut(s)	316
PsuI	RGATCY	3 cut(s)	724, 1401, 2059
PvuI	CGATCG	1 cut(s)	762
PvuII	CAGCTG	3 cut(s)	463, 1568, 1625
RsaI	GTAC	2 cut(s)	610, 1384
RsaNI	GTAC	2 cut(s)	609, 1383
SapI	GCTCTTC	2 cut(s)	561, 844
SatI	GCNGC	9 cut(s)	330, 480, 1110, 1157, 1503, 1541, 1566, 2030, 2145
Sau3AI	GATC	5 cut(s)	172, 724, 759, 1401, 2059
Sau96I	GGNCC	3 cut(s)	157, 619, 1147
ScaI	AGTACT	1 cut(s)	610
SchI	GAGTC	3 cut(s)	277, 1184, 1975
ScrFI	CCNGG	1 cut(s)	1751
SduI	GDGCHC	2 cut(s)	23, 241
SfaNI	GCATC	9 cut(s)	238, 316, 424, 1048, 1108, 1904, 1915, 2015, 2092
SfcI	CTRYAG	3 cut(s)	1445, 1503, 1592
Sfr274I	CTCGAG	1 cut(s)	1172
SfuI	TTCGAA	1 cut(s)	1343
SinI	GGWCC	2 cut(s)	157, 619
SlaI	CTCGAG	1 cut(s)	1172
SmlI	CTYRAG	3 cut(s)	1172, 1192, 1739
SmoI	CTYRAG	3 cut(s)	1172, 1192, 1739
SseBI	AGGCCT	1 cut(s)	831
SsiI	CCGC	1 cut(s)	2029
SspI	AATATT	2 cut(s)	1254, 2025
SspMI	CTAG	5 cut(s)	623, 897, 908, 1329, 1562
StuI	AGGCCT	1 cut(s)	831
StyD4I	CCNGG	1 cut(s)	1749
StyI	CCWWGG	2 cut(s)	622, 2013
TaaI	ACNGT	5 cut(s)	991, 1012, 1274, 1368, 2113
TaiI	ACGT	2 cut(s)	1485, 1912
TaqI	TCGA	8 cut(s)	55, 711, 758, 762, 792, 1173, 1343, 2054
TatI	WGTACW	2 cut(s)	608, 1382
TauI	GCSGC	1 cut(s)	2032
TfiI	GAWTC	7 cut(s)	446, 509, 794, 958, 1345, 1439, 2150
TscAI	CASTG	6 cut(s)	436, 994, 1279, 1449, 1512, 2116
TseFI	GTSAC	3 cut(s)	1478, 1767, 2107
TseI	GCWGC	8 cut(s)	329, 479, 1109, 1156, 1502, 1540, 1565, 2144
Tsp45I	GTSAC	3 cut(s)	1478, 1767, 2107
TspRI	CASTG	6 cut(s)	436, 994, 1279, 1449, 1512, 2116
VpaK11BI	GGWCC	2 cut(s)	157, 619
VspI	ATTAAT	2 cut(s)	783, 1796
XagI	CCTNNNNNAGG	4 cut(s)	626, 701, 1460, 1754
XapI	RAATTY	5 cut(s)	595, 669, 1003, 1375, 1833
XbaI	TCTAGA	1 cut(s)	1328
XhoI	CTCGAG	1 cut(s)	1172
XmaJI	CCTAGG	1 cut(s)	622
XspI	CTAG	5 cut(s)	623, 897, 908, 1329, 1562
ZrmI	AGTACT	1 cut(s)	610
Zsp2I	ATGCAT	2 cut(s)	1267, 1795

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.