Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003650

Physical Location & Seq

Genomic Coordinates Forward (+)

43143523 .. 43148666

Gene Structure 5144 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0345600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1374 bp

ATGATGGTCTGTAGATTATCGACTTTGCTGTTGAACGTATGCATATCTTCATTTTGTAAAGTCCGGCTATTGGGGAGAGCGGAGGCCGTTATAATTGATGGTATAAGATTAGGGGTGATTCCAGATGTAGTGACTTACAATACTTTGGTTCATGCATATTGTCAGTTTGTTAGCGTAGATGCGGCTTATTCCGTTGTTCATAGAATGAAAGAAGCTGGGATAAGTCCGGATGTCGTTACTTACAACTCTTTGATATCCGGGGCCACCAGGAATCGCTTATTATCTCGAGTCCTGGATCTGTTTGAGGAAATGTTACAGGAAGGTATACATCCTGACGTGTGGAGTTACAATATTCTGATGCACTGTTTCTTTAAGTTAGGGAAACCTGATGAAGCCAACAGAGTCTTCCAGGATATTTTACTTAGCGACCTCACTCCTCATGCAGCTACATTTAATATTATGATTAATGGTCTTTGTAAAAATGGGTACACAGACAATGCTCTTATGTTATTTAGGAATTTACAACGTCATGGATTTGTTCCCCCGTTAGTGACATACAATATTCTTATCAGTGGGCTTTGCAAGGCACGTAGAGTGGGGCAAGCGAGGAGAATTCTAAAGGACCTTGGAGAATCAAGTCATAAGCCAAATGCCGTAACCTACACTACAGTTATGAGTTGCTGCTTTAGGTCTAAGCAATACGACCAAGGGCTTGAGATTATGTCAGAGATGAAGAGTAAAGGGTATACATTTGACGGCTTTGCATACTGCACAGTCATTGCCGCTTTACTTAAGACTGGAAGGATGGAAGGAGCAAATGCTTTCATGGAACAGATGATGAATAGTGGCATTGAAATGGATTTGGTGTCTTATAACACCTTACTTAATAAGCTTTGTAAAGAAGGCAAGGTTGAAGCTGCCTATAAGTTGTTGGATGAAATAGAGAATGGGGGCCTTTTGTGTGATAAGTATACCCATACAATCATGATTGATGGATTGTGTAAGGCGGGCAATATTGCTGGTGCTCAACAACATTTACATTATATGAATATGATGGGATTCCAGGAAAACTTGGTTGCCTTTAACTGTCTGATTGATGGCTTGGGTAAAGCTGGTGAAATCGATCGTGCAATGGAATTGTATAATTCAATGGAGACTAGGGATTCTTTTACCTATGACTCCTTGGTGCTCAATCTTTGCAAGGCTGGAAGGGTCCTTTGTGCATCTAAGCTTATGATGAAATGTTTAAGAGAGGGAATGATATTACTCTACTCTACCAGGCGAGCACTCCTTGATGGGCTTCGTTCTTCAGGGTTTACAAATGAAGCAAGAAAGCTTCAATCAAAAATTCGGTTAGCTCGGCTGTTACGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0009295 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0016020 GO:0016363 GO:0031974 GO:0031976 GO:0031981 GO:0031984 GO:0034357 GO:0034399 GO:0042646 GO:0042651 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035 GO:0070013 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

457

Amino Acids

51.23

Weight (kDa)

8.65

Isoelectric Point (pI)

38.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	36 - 86	8.8e-13	Pentatricopeptide repeat domain
PPR_1	PF12854	38 - 70	5.7e-09	PPR repeat
PPR_2	PF13041	41 - 87	1.3e-15	PPR repeat family
TPR_24	PF23276	44 - 138	3.4e-07	Fungal tetratrico peptide repeats
PPR_1	PF12854	73 - 104	7.6e-07	PPR repeat
PPR_2	PF13041	76 - 125	1e-14	PPR repeat family
PPR	PF01535	79 - 109	4.1e-07	PPR repeat
PPR_3	PF13812	100 - 156	8.4e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	108 - 137	2e-06	PPR repeat
PPR_2	PF13041	111 - 160	7.6e-13	PPR repeat family
PPR_1	PF12854	144 - 172	1.1e-08	PPR repeat
PPR_2	PF13041	146 - 195	8e-15	PPR repeat family
PPR	PF01535	150 - 179	2.1e-07	PPR repeat
PPR_3	PF13812	170 - 228	4.5e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	178 - 207	5.8e-08	PPR repeat
PPR_2	PF13041	183 - 229	1.6e-12	PPR repeat family
PPR_long	PF17177	201 - 315	3.7e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	216 - 264	1e-09	PPR repeat family
PPR	PF01535	219 - 248	8.4e-06	PPR repeat
PPR_2	PF13041	254 - 299	1.9e-09	PPR repeat family
TPR_24	PF23276	278 - 384	1.4e-07	Fungal tetratrico peptide repeats
PPR_1	PF12854	283 - 314	1.8e-10	PPR repeat
PPR_2	PF13041	287 - 335	4.6e-17	PPR repeat family
PPR	PF01535	289 - 318	5.1e-06	PPR repeat
PPR_1	PF12854	318 - 349	6.3e-07	PPR repeat
PPR_1	PF12854	354 - 385	1.4e-07	PPR repeat
PPR_2	PF13041	357 - 401	3.7e-08	PPR repeat family
PPR	PF01535	359 - 387	2e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0003650)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16000
fragaria_vesca	FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081
malus_domestica	MD09G1212900.v1.1 MD09G1213300.v1.1 MD09G1213400.v1.1 MD09G1213500.v1.1 MD09G1213800.v1.1 MD17G1195700.v1.1
prunus_persica	Prupe.3G071700_v2.0.a1
pyrus_communis	pycom09g13050 pycom17g20130 pycom17g20140
rosa_chinensis	RchiOBHm_Chr2g0137781
rosa_laevigata	RLG00000019675
rosa_multiflora	Rmu_sc0008635.1_g000002
rosa_roxburghii	Rroxscaffold_2G00106850
rosa_rugosa	Rorug02G0345400 Rorug02G0345500 Rorug02G0345600 Rorug02G0345600 Rorug02G0345700 Rorug02G0345700
rosa_samantha	Rh2AG392700 Rh2BG400400 Rh2CG379400 Rh2DG415300
rosa_wichuraiana	Rw2G032170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	92, 873
AccBSI	CCGCTC	1 cut(s)	80
AccI	GTMKAC	3 cut(s)	325, 746, 971
AccIII	TCCGGA	1 cut(s)	226
AciI	CCGC	4 cut(s)	80, 182, 783, 1007
AclWI	GGATC	1 cut(s)	303
AcsI	RAATTY	3 cut(s)	517, 612, 1347
AcuI	CTGAAG	1 cut(s)	1293
AfaI	GTAC	1 cut(s)	488
AfiI	CCNNNNNNNGG	1 cut(s)	70
AflII	CTTAAG	1 cut(s)	791
AflIII	ACRYGT	1 cut(s)	336
AgsI	TTSAA	5 cut(s)	34, 854, 914, 1149, 1340
AjiI	CACGTC	1 cut(s)	337
AjnI	CCWGG	5 cut(s)	266, 291, 408, 1062, 1277
AjuI	GAANNNNNNNTTGG	2 cut(s)	389, 421
AluBI	AGCT	8 cut(s)	215, 446, 892, 917, 1112, 1231, 1336, 1358
AluI	AGCT	8 cut(s)	215, 446, 892, 917, 1112, 1231, 1336, 1358
Alw21I	GWGCWC	3 cut(s)	1027, 1191, 1288
Alw26I	GTCTC	1 cut(s)	1148
AlwI	GGATC	1 cut(s)	303
Ama87I	CYCGRG	1 cut(s)	285
Aor13HI	TCCGGA	1 cut(s)	226
AoxI	GGCC	3 cut(s)	84, 261, 952
ApeKI	GCWGC	3 cut(s)	443, 681, 917
ApoI	RAATTY	3 cut(s)	517, 612, 1347
AseI	ATTAAT	1 cut(s)	465
AspS9I	GGNCC	4 cut(s)	261, 622, 952, 1213
AsuC2I	CCSGG	1 cut(s)	259
AsuHPI	GGTGA	2 cut(s)	127, 1127
AvaI	CYCGRG	1 cut(s)	285
AvaII	GGWCC	2 cut(s)	622, 1213
BbsI	GAAGAC	1 cut(s)	397
Bbv12I	GWGCWC	3 cut(s)	1027, 1191, 1288
BbvI	GCAGC	3 cut(s)	455, 668, 904
BccI	CCATC	6 cut(s)	92, 799, 986, 1048, 1091, 1289
BceAI	ACGGC	3 cut(s)	71, 638, 772
BciT130I	CCWGG	5 cut(s)	268, 293, 410, 1064, 1279
BcnI	CCSGG	1 cut(s)	259
BcoDI	GTCTC	1 cut(s)	1148
BfaI	CTAG	1 cut(s)	1158
BfmI	CTRYAG	2 cut(s)	10, 666
BfrI	CTTAAG	1 cut(s)	791
BisI	GCNGC	5 cut(s)	183, 444, 682, 783, 918
BlsI	GCNGC	5 cut(s)	184, 445, 683, 784, 919
Bme1390I	CCNGG	6 cut(s)	259, 268, 293, 410, 1064, 1279
Bme18I	GGWCC	2 cut(s)	622, 1213
BmeT110I	CYCGRG	1 cut(s)	285
BmgBI	CACGTC	1 cut(s)	337
BmgT120I	GGNCC	4 cut(s)	261, 622, 952, 1213
BmiI	GGNNCC	3 cut(s)	262, 953, 1214
BmrFI	CCNGG	6 cut(s)	259, 268, 293, 410, 1064, 1279
BmsI	GCATC	3 cut(s)	169, 348, 1232
BpiI	GAAGAC	1 cut(s)	397
BpuEI	CTTGAG	1 cut(s)	734
BpuMI	CCSGG	1 cut(s)	259
Bsa29I	ATCGAT	1 cut(s)	1122
BsaAI	YACGTR	1 cut(s)	590
BsaJI	CCNNGG	4 cut(s)	258, 625, 706, 1182
BsaWI	WCCGGW	1 cut(s)	226
Bsc4I	CCNNNNNNNGG	1 cut(s)	70
Bse1I	ACTGG	1 cut(s)	802
Bse3DI	GCAATG	2 cut(s)	777, 1137
BseAI	TCCGGA	1 cut(s)	226
BseBI	CCWGG	5 cut(s)	268, 293, 410, 1064, 1279
BseCI	ATCGAT	1 cut(s)	1122
BseDI	CCNNGG	4 cut(s)	258, 625, 706, 1182
BseGI	GGATG	4 cut(s)	235, 328, 810, 940
BseLI	CCNNNNNNNGG	1 cut(s)	70
BseMI	GCAATG	2 cut(s)	777, 1137
BseNI	ACTGG	1 cut(s)	802
BseRI	GAGGAG	2 cut(s)	426, 622
BseXI	GCAGC	3 cut(s)	455, 668, 904
BseYI	CCCAGC	1 cut(s)	215
BsgI	GTGCAG	1 cut(s)	754
Bsh1285I	CGRYCG	1 cut(s)	1126
BshFI	GGCC	3 cut(s)	86, 263, 954
BshVI	ATCGAT	1 cut(s)	1122
BsiEI	CGRYCG	1 cut(s)	1126
BsiHKAI	GWGCWC	3 cut(s)	1027, 1191, 1288
BsiHKCI	CYCGRG	1 cut(s)	285
BsiSI	CCGG	3 cut(s)	64, 227, 258
BslI	CCNNNNNNNGG	1 cut(s)	70
BsmAI	GTCTC	1 cut(s)	1148
BsnI	GGCC	3 cut(s)	86, 263, 954
BsoBI	CYCGRG	1 cut(s)	285
Bsp1286I	GDGCHC	3 cut(s)	1027, 1191, 1288
Bsp13I	TCCGGA	1 cut(s)	226
Bsp143I	GATC	2 cut(s)	295, 1123
BspACI	CCGC	4 cut(s)	80, 182, 783, 1007
BspANI	GGCC	3 cut(s)	86, 263, 954
BspDI	ATCGAT	1 cut(s)	1122
BspEI	TCCGGA	1 cut(s)	226
BspHI	TCATGA	1 cut(s)	984
BspLI	GGNNCC	3 cut(s)	262, 953, 1214
BspPI	GGATC	1 cut(s)	303
BspTI	CTTAAG	1 cut(s)	791
BsrBI	CCGCTC	1 cut(s)	80
BsrDI	GCAATG	2 cut(s)	777, 1137
BsrI	ACTGG	1 cut(s)	802
BssECI	CCNNGG	4 cut(s)	258, 625, 706, 1182
BssMI	GATC	2 cut(s)	295, 1123
BssNAI	GTATAC	3 cut(s)	326, 747, 972
BssT1I	CCWWGG	3 cut(s)	625, 706, 1182
Bst1107I	GTATAC	3 cut(s)	326, 747, 972
Bst2UI	CCWGG	5 cut(s)	268, 293, 410, 1064, 1279
Bst4CI	ACNGT	4 cut(s)	365, 670, 775, 1088
Bst6I	CTCTTC	1 cut(s)	728
BstAFI	CTTAAG	1 cut(s)	791
BstBAI	YACGTR	1 cut(s)	590
BstC8I	GCNNGC	3 cut(s)	603, 1009, 1284
BstDEI	CTNAG	3 cut(s)	422, 693, 1227
BstF5I	GGATG	4 cut(s)	235, 328, 810, 940
BstKTI	GATC	2 cut(s)	298, 1126
BstMAI	GTCTC	1 cut(s)	1148
BstMBI	GATC	2 cut(s)	295, 1123
BstMCI	CGRYCG	1 cut(s)	1126
BstNI	CCWGG	5 cut(s)	268, 293, 410, 1064, 1279
BstSCI	CCNGG	6 cut(s)	257, 266, 291, 408, 1062, 1277
BstSFI	CTRYAG	2 cut(s)	10, 666
BstV1I	GCAGC	3 cut(s)	455, 668, 904
BstV2I	GAAGAC	1 cut(s)	397
BstX2I	RGATCY	1 cut(s)	295
BstYI	RGATCY	1 cut(s)	295
BstZ17I	GTATAC	3 cut(s)	326, 747, 972
Bsu15I	ATCGAT	1 cut(s)	1122
BsuRI	GGCC	3 cut(s)	86, 263, 954
BsuTUI	ATCGAT	1 cut(s)	1122
BtrI	CACGTC	1 cut(s)	337
BtsCI	GGATG	4 cut(s)	235, 328, 810, 940
BtsIMutI	CAGTG	2 cut(s)	361, 577
Cac8I	GCNNGC	3 cut(s)	603, 1009, 1284
CciI	TCATGA	1 cut(s)	984
Cfr13I	GGNCC	4 cut(s)	261, 622, 952, 1213
ClaI	ATCGAT	1 cut(s)	1122
Csp6I	GTAC	1 cut(s)	487
CviAII	CATG	5 cut(s)	152, 440, 530, 826, 985
CviQI	GTAC	1 cut(s)	487
DdeI	CTNAG	3 cut(s)	422, 693, 1227
DpnI	GATC	2 cut(s)	297, 1125
DpnII	GATC	2 cut(s)	295, 1123
Eam1104I	CTCTTC	1 cut(s)	728
EarI	CTCTTC	1 cut(s)	728
Eco130I	CCWWGG	3 cut(s)	625, 706, 1182
Eco32I	GATATC	1 cut(s)	255
Eco47I	GGWCC	2 cut(s)	622, 1213
Eco57I	CTGAAG	1 cut(s)	1293
Eco88I	CYCGRG	1 cut(s)	285
EcoO109I	RGGNCCY	3 cut(s)	622, 952, 1213
EcoRI	GAATTC	1 cut(s)	612
EcoRII	CCWGG	5 cut(s)	266, 291, 408, 1062, 1277
EcoRV	GATATC	1 cut(s)	255
EcoT14I	CCWWGG	3 cut(s)	625, 706, 1182
EcoT22I	ATGCAT	2 cut(s)	44, 157
ErhI	CCWWGG	3 cut(s)	625, 706, 1182
FaeI	CATG	5 cut(s)	155, 443, 533, 829, 988
FatI	CATG	5 cut(s)	151, 439, 529, 825, 984
FauI	CCCGC	1 cut(s)	1000
FblI	GTMKAC	3 cut(s)	325, 746, 971
Fnu4HI	GCNGC	5 cut(s)	183, 444, 682, 783, 918
FokI	GGATG	4 cut(s)	242, 315, 817, 947
Fsp4HI	GCNGC	5 cut(s)	183, 444, 682, 783, 918
FspBI	CTAG	1 cut(s)	1158
GluI	GCNGC	5 cut(s)	183, 444, 682, 783, 918
GsaI	CCCAGC	1 cut(s)	219
HaeIII	GGCC	3 cut(s)	86, 263, 954
HapII	CCGG	3 cut(s)	64, 227, 258
Hin1II	CATG	5 cut(s)	155, 443, 533, 829, 988
HindIII	AAGCTT	3 cut(s)	890, 1229, 1334
HinfI	GANTC	8 cut(s)	118, 271, 288, 402, 632, 1059, 1163, 1178
HpaII	CCGG	3 cut(s)	64, 227, 258
HphI	GGTGA	2 cut(s)	127, 1127
Hpy166II	GTNNAC	5 cut(s)	326, 489, 747, 972, 1317
Hpy188I	TCNGA	3 cut(s)	357, 727, 1092
Hpy188III	TCNNGA	5 cut(s)	122, 227, 285, 332, 985
Hpy8I	GTNNAC	5 cut(s)	326, 489, 747, 972, 1317
HpyAV	CCTTC	5 cut(s)	314, 795, 803, 896, 1203
HpyCH4III	ACNGT	4 cut(s)	365, 670, 775, 1088
HpyCH4IV	ACGT	5 cut(s)	36, 336, 526, 589, 1369
HpyF3I	CTNAG	3 cut(s)	422, 693, 1227
HpySE526I	ACGT	5 cut(s)	36, 336, 526, 589, 1369
Hsp92II	CATG	5 cut(s)	155, 443, 533, 829, 988
Kpn2I	TCCGGA	1 cut(s)	226
Kzo9I	GATC	2 cut(s)	295, 1123
LmnI	GCTCC	1 cut(s)	812
Lsp1109I	GCAGC	3 cut(s)	455, 668, 904
LweI	GCATC	3 cut(s)	169, 348, 1232
MaeI	CTAG	1 cut(s)	1158
MaeII	ACGT	5 cut(s)	36, 336, 526, 589, 1369
MaeIII	GTNAC	7 cut(s)	130, 235, 312, 344, 550, 655, 1365
MalI	GATC	2 cut(s)	297, 1125
MbiI	CCGCTC	1 cut(s)	80
MboI	GATC	2 cut(s)	295, 1123
MboII	GAAGA	4 cut(s)	39, 397, 745, 1299
MflI	RGATCY	1 cut(s)	295
MhlI	GDGCHC	3 cut(s)	1027, 1191, 1288
MluCI	AATT	6 cut(s)	93, 517, 612, 1136, 1144, 1347
MlyI	GAGTC	3 cut(s)	297, 411, 1172
MmeI	TCCRAC	1 cut(s)	912
MnlI	CCTC	6 cut(s)	76, 298, 440, 447, 600, 1246
Mph1103I	ATGCAT	2 cut(s)	44, 157
MroI	TCCGGA	1 cut(s)	226
MseI	TTAA	8 cut(s)	372, 453, 465, 792, 885, 1083, 1247, 1372
MslI	CAYNNNNRTG	1 cut(s)	854
MspCI	CTTAAG	1 cut(s)	791
MspI	CCGG	3 cut(s)	64, 227, 258
MspR9I	CCNGG	6 cut(s)	259, 268, 293, 410, 1064, 1279
MvaI	CCWGG	5 cut(s)	268, 293, 410, 1064, 1279
NciI	CCSGG	1 cut(s)	259
NdeII	GATC	2 cut(s)	295, 1123
NlaIII	CATG	5 cut(s)	155, 443, 533, 829, 988
NlaIV	GGNNCC	3 cut(s)	262, 953, 1214
NmeAIII	GCCGAG	1 cut(s)	1339
NmuCI	GTSAC	2 cut(s)	130, 550
NsiI	ATGCAT	2 cut(s)	44, 157
PaeR7I	CTCGAG	1 cut(s)	285
PagI	TCATGA	1 cut(s)	984
PcsI	WCGNNNNNNNCGW	1 cut(s)	1366
PfeI	GAWTC	5 cut(s)	118, 271, 632, 1059, 1163
PfoI	TCCNGGA	3 cut(s)	291, 408, 1062
PkrI	GCNGC	5 cut(s)	184, 445, 683, 784, 919
Ple19I	CGATCG	1 cut(s)	1126
PleI	GAGTC	3 cut(s)	296, 410, 1172
PpsI	GAGTC	3 cut(s)	296, 410, 1172
Ppu21I	YACGTR	1 cut(s)	590
PpuMI	RGGWCCY	2 cut(s)	622, 1213
PshBI	ATTAAT	1 cut(s)	465
PsiI	TTATAA	2 cut(s)	92, 873
Psp5II	RGGWCCY	2 cut(s)	622, 1213
Psp6I	CCWGG	5 cut(s)	266, 291, 408, 1062, 1277
PspFI	CCCAGC	1 cut(s)	215
PspGI	CCWGG	5 cut(s)	266, 291, 408, 1062, 1277
PspN4I	GGNNCC	3 cut(s)	262, 953, 1214
PspPI	GGNCC	4 cut(s)	261, 622, 952, 1213
PspPPI	RGGWCCY	2 cut(s)	622, 1213
PsuI	RGATCY	1 cut(s)	295
PvuI	CGATCG	1 cut(s)	1126
RsaI	GTAC	1 cut(s)	488
RsaNI	GTAC	1 cut(s)	487
RseI	CAYNNNNRTG	1 cut(s)	854
SaqAI	TTAA	8 cut(s)	372, 453, 465, 792, 885, 1083, 1247, 1372
SatI	GCNGC	5 cut(s)	183, 444, 682, 783, 918
Sau3AI	GATC	2 cut(s)	295, 1123
Sau96I	GGNCC	4 cut(s)	261, 622, 952, 1213
SchI	GAGTC	3 cut(s)	297, 411, 1172
ScrFI	CCNGG	6 cut(s)	259, 268, 293, 410, 1064, 1279
SduI	GDGCHC	3 cut(s)	1027, 1191, 1288
SfaNI	GCATC	3 cut(s)	169, 348, 1232
SfcI	CTRYAG	2 cut(s)	10, 666
Sfr274I	CTCGAG	1 cut(s)	285
SinI	GGWCC	2 cut(s)	622, 1213
SlaI	CTCGAG	1 cut(s)	285
SmiMI	CAYNNNNRTG	1 cut(s)	854
SmlI	CTYRAG	3 cut(s)	285, 713, 791
SmoI	CTYRAG	3 cut(s)	285, 713, 791
Sse9I	AATT	6 cut(s)	93, 517, 612, 1136, 1144, 1347
SsiI	CCGC	4 cut(s)	80, 182, 783, 1007
SspI	AATATT	4 cut(s)	352, 457, 562, 1015
SspMI	CTAG	1 cut(s)	1158
StyD4I	CCNGG	6 cut(s)	257, 266, 291, 408, 1062, 1277
StyI	CCWWGG	3 cut(s)	625, 706, 1182
TaaI	ACNGT	4 cut(s)	365, 670, 775, 1088
TaiI	ACGT	5 cut(s)	39, 339, 529, 592, 1372
TaqI	TCGA	3 cut(s)	20, 286, 1122
TasI	AATT	6 cut(s)	93, 517, 612, 1136, 1144, 1347
TauI	GCSGC	2 cut(s)	185, 785
TfiI	GAWTC	5 cut(s)	118, 271, 632, 1059, 1163
Tru1I	TTAA	8 cut(s)	372, 453, 465, 792, 885, 1083, 1247, 1372
Tru9I	TTAA	8 cut(s)	372, 453, 465, 792, 885, 1083, 1247, 1372
TscAI	CASTG	2 cut(s)	368, 577
TseFI	GTSAC	2 cut(s)	130, 550
TseI	GCWGC	3 cut(s)	443, 681, 917
Tsp45I	GTSAC	2 cut(s)	130, 550
TspGWI	ACGGA	1 cut(s)	181
TspRI	CASTG	2 cut(s)	368, 577
Vha464I	CTTAAG	1 cut(s)	791
VpaK11BI	GGWCC	2 cut(s)	622, 1213
VspI	ATTAAT	1 cut(s)	465
XapI	RAATTY	3 cut(s)	517, 612, 1347
XhoI	CTCGAG	1 cut(s)	285
XmiI	GTMKAC	3 cut(s)	325, 746, 971
XspI	CTAG	1 cut(s)	1158
Zsp2I	ATGCAT	2 cut(s)	44, 157

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.