Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0003650

Physical Location & Seq

Genomic Coordinates Reverse (-)

60352128 .. 60356945

Gene Structure 4818 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG415300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGGGGTTTGCAATGGGGAGCACTTGCTTCCTACACTCTCCCTTCCCTCACTCTCGATTTCCCTTTTCTTCTTCTTCTCATTCCAAAACCAGAAATGCAGAGACCAACGCAAGAAGAAGCAGAACAAGAGTGCCAATGTCGTCTCTGCGCCAAGAGGACCTCAACGACGGCGATCATGGCAAGAGGAGGGCTATTCTCTTTGTGGGTATCTCAGTTCTTCCACTATTGCATCTCAGGGCTCATGCTTTTGAACCCTGGCCCGCTAAAGAAATTGAGCCAAAGACTCCAGACAAGAACATAAAGGCAGAGGGACTGCAAGGAGATGCAGCACCAAATCCCATTTTGTCTATACTGAATGGTATTGGTATTTTCAGCTCTGGTGTCATCGGTGCGTTTTATGGATTGGCTCAGAAAGAAAAGAAAGCTACTGATGCAATAGTAGAATCTATGAAGAACCAGCTGAAAGAAAAGGAAGCTGCTATTGCTTCATTGGAGAAGAACTTTGAATCCAAGCTACTGGATGAACAGGAAGAAAGGAGCAAGCAACTTGGAAAGGCGAAGGAAGAGCAGAGGTCTCTAACAGACCAACTAAATTCAGCAAAGAGTACTATTGTGGACCTAGGGAAGGAGCTAAATAGTGAGAAGAAGTTGATTGAGGAGCTTAAAATTCAAAGTGAAAGCCTTAAAACAAACCTTTCAAAGGCTATCGAAGATAAGGTAGAGCTTGAAGAAAGTTTGAAGGAAAAGCTCCACTCGATCGAAGATTTGCAGGGAAGGATTAATTTACTCAATTCAGAACTGAAGGACAGAGAAAGTAATGTTCGAAGCCTTAGCTCTTCTCTCGCAGAAAAGGATTTGGAGTTGAAGGACTTAAAAACTACCTACAAGCAAACTAGGGATGAACTAGCTCATACAGTTTCAGATATTCAACAATTAAAAGTTGAAATCCTGAAGAATCAAAAGGAATTGGAATTGAAGAGTTCCACTGTGGATGAATTGAATTCAACAGTAAGTTCTTTGTCTTCTGAGAAAGGTGATTTTAAGAGGAAGCTTGATGCTATTCAGGAGGAATACAATAATCTGAAATCATCCTCTGGAAAAAAGGCAGCTTTGGATGCTAAGCTTTTGGGAGAAAAAGATGAGGCCCTTCAGCTGCTAAAGGAAAAACTTGAGCTTGCATTGACTGACTCAAGTAGAAGCAAACAGATAACTGCTGATTTGACACGAGAGAAGGAAACCTTGAGGGAAATGTTGGATAATGCATTGAACAGTGAAGAGAACTTGAAACATGAACTCCACATCACTCAGGAAGCTCTTGGAAAATCTAGAAATGAAGCTTCGAATCTGGAACATCAATTAAAACAGTCAAAAAATTTGTGTACAGAACTTGAAGCTGAGATCTCTCGGGTTCAGGCTGAGTTTACTGGAGTTAGGGAATCACTGCAGAGGAGCCTAGATGAGGCTACATCAAGTGGTGATGTGATTGCTACTGAGCTTGCTGCAGTGAAAGAACTTCTAAAGAAGACAGAAGAGGAGCTGCAAAGTGTGTCTCATCAACTAGCAGCTGTTGCAGAAAATCATGATAGCCTGCAGAATGAATTGGTTGATGTATATAAAACAGCGGACAAAGCTTCTAATGATTTAAAAGAAGAGAAGGAGCGAGTTTCTTCTCTTAAAAAAGAACTTCAAACTCTGGAGAAGCAAATCTCAGAGAACAAGAAATCCCAGAAGTCTCTTGAGACAGACCTGGAAGAGGCTACAAAGTCACTTGATGAGATGAACCGAAATGCATTAATACTTTCCAAAGAGTTAGAGAAGGCTAATTCTCTAATTTCTAACCTTGAAGACGAGAAAGAGGTGTTTTACAAGTCCCTAACAGAGCAAAAGACTGCATCCAAAGAGGCACGTGAAAATATGGAAGATGCCCATAATCTTGTCATGAAACTTGGCAAGGAAAGGGAGAGTCTGGAGAAGAGAGCGAAGAAAATGGAAGAGGAGTTGGCATCGGCCAAGGGTGAAATATTGCGGCTGAGGAGTAAAATAAAATCGTCTAAAGATCTTGTAAATAATGAGAAACCACAGAAAGTTGAGGCTGAAGGTGCTGTCACTGTTACTGCAAAGAGAGGTAGGAGGAGAAAGGCTGCTGAATCAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0009295 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0016020 GO:0016363 GO:0031974 GO:0031976 GO:0031981 GO:0031984 GO:0034357 GO:0034399 GO:0042646 GO:0042651 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035 GO:0070013 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

718

Amino Acids

80.58

Weight (kDa)

5.87

Isoelectric Point (pI)

51.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CCDC39	PF24161	527 - 699	1.7e-06	Coiled-coil domain-containing protein 39

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003650)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16000
fragaria_vesca	FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081 FvH4_6g31081
malus_domestica	MD09G1212900.v1.1 MD09G1213300.v1.1 MD09G1213400.v1.1 MD09G1213500.v1.1 MD09G1213800.v1.1 MD17G1195700.v1.1
prunus_persica	Prupe.3G071700_v2.0.a1
pyrus_communis	pycom09g13050 pycom17g20130 pycom17g20140
rosa_chinensis	RchiOBHm_Chr2g0137781
rosa_laevigata	RLG00000019675
rosa_multiflora	Rmu_sc0008635.1_g000002
rosa_roxburghii	Rroxscaffold_2G00106850
rosa_rugosa	Rorug02G0345400 Rorug02G0345500 Rorug02G0345600 Rorug02G0345600 Rorug02G0345700 Rorug02G0345700
rosa_samantha	Rh2AG392700 Rh2BG400400 Rh2CG379400 Rh2DG415300
rosa_wichuraiana	Rw2G032170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	3 cut(s)	261, 1622, 2026
AcoI	YGGCCR	1 cut(s)	2007
AcsI	RAATTY	4 cut(s)	592, 666, 1000, 1372
AcuI	CTGAAG	4 cut(s)	821, 971, 1133, 2115
AcvI	CACGTG	1 cut(s)	1907
AfaI	GTAC	2 cut(s)	607, 1381
AfiI	CCNNNNNNNGG	4 cut(s)	625, 700, 1459, 1753
AjnI	CCWGG	2 cut(s)	254, 1746
AloI	GAACNNNNNNTCC	4 cut(s)	491, 523, 1706, 1738
Alw21I	GWGCWC	1 cut(s)	23
Alw26I	GTCTC	6 cut(s)	95, 147, 579, 1554, 1733, 1737
Ama87I	CYCGRG	1 cut(s)	1404
AoxI	GGCC	3 cut(s)	257, 1143, 2007
ApeKI	GCWGC	8 cut(s)	326, 476, 1106, 1153, 1499, 1537, 1562, 2141
ApoI	RAATTY	4 cut(s)	592, 666, 1000, 1372
AseI	ATTAAT	2 cut(s)	780, 1793
AspA2I	CCTAGG	1 cut(s)	619
AspLEI	GCGC	1 cut(s)	150
AspS9I	GGNCC	4 cut(s)	157, 258, 616, 1144
AsuHPI	GGTGA	3 cut(s)	1046, 1487, 2027
AsuII	TTCGAA	2 cut(s)	823, 1340
AvaI	CYCGRG	1 cut(s)	1404
AvaII	GGWCC	2 cut(s)	157, 616
AvrII	CCTAGG	1 cut(s)	619
BanII	GRGCYC	1 cut(s)	241
BauI	CACGAG	1 cut(s)	1224
BbrPI	CACGTG	1 cut(s)	1907
BbsI	GAAGAC	3 cut(s)	1014, 1529, 1851
Bbv12I	GWGCWC	1 cut(s)	23
BbvCI	CCTCAGC	1 cut(s)	2030
BbvI	GCAGC	8 cut(s)	338, 463, 1118, 1140, 1486, 1524, 1574, 2128
BceAI	ACGGC	1 cut(s)	184
BciT130I	CCWGG	2 cut(s)	256, 1748
BcoDI	GTCTC	6 cut(s)	95, 147, 579, 1554, 1733, 1737
BfaI	CTAG	6 cut(s)	620, 894, 905, 1326, 1454, 1559
BfmI	CTRYAG	3 cut(s)	1442, 1500, 1589
BglII	AGATCT	2 cut(s)	1398, 2056
BisI	GCNGC	9 cut(s)	327, 477, 1107, 1154, 1500, 1538, 1563, 2027, 2142
BlnI	CCTAGG	1 cut(s)	619
BlpI	GCTNAGC	1 cut(s)	1119
BlsI	GCNGC	9 cut(s)	328, 478, 1108, 1155, 1501, 1539, 1564, 2028, 2143
BmcAI	AGTACT	1 cut(s)	607
Bme1390I	CCNGG	2 cut(s)	256, 1748
Bme18I	GGWCC	2 cut(s)	157, 616
BmeT110I	CYCGRG	1 cut(s)	1404
BmgT120I	GGNCC	4 cut(s)	157, 258, 616, 1144
BmiI	GGNNCC	1 cut(s)	1451
BmrFI	CCNGG	2 cut(s)	256, 1748
BmsI	GCATC	8 cut(s)	238, 313, 421, 1045, 1105, 1901, 1912, 2012
BpiI	GAAGAC	3 cut(s)	1014, 1529, 1851
BpmI	CTGGAG	4 cut(s)	270, 1446, 1715, 1988
Bpu10I	CCTNAGC	2 cut(s)	830, 2030
Bpu1102I	GCTNAGC	1 cut(s)	1119
Bpu14I	TTCGAA	2 cut(s)	823, 1340
BpuEI	CTTGAG	4 cut(s)	1174, 1190, 1261, 1757
BsaAI	YACGTR	1 cut(s)	1907
BsaI	GGTCTC	2 cut(s)	95, 579
BsaJI	CCNNGG	3 cut(s)	254, 619, 2010
BsaXI	ACNNNNNCTCC	2 cut(s)	1278, 1308
Bsc4I	CCNNNNNNNGG	4 cut(s)	625, 700, 1459, 1753
Bse1I	ACTGG	2 cut(s)	522, 1429
Bse3DI	GCAATG	1 cut(s)	18
BseBI	CCWGG	2 cut(s)	256, 1748
BseDI	CCNNGG	3 cut(s)	254, 619, 2010
BseGI	GGATG	6 cut(s)	526, 904, 997, 1088, 1120, 1892
BseLI	CCNNNNNNNGG	4 cut(s)	625, 700, 1459, 1753
BseMI	GCAATG	1 cut(s)	18
BseNI	ACTGG	2 cut(s)	522, 1429
BseRI	GAGGAG	7 cut(s)	199, 671, 1462, 1547, 2009, 2047, 2146
BseXI	GCAGC	8 cut(s)	338, 463, 1118, 1140, 1486, 1524, 1574, 2128
Bsh1285I	CGRYCG	1 cut(s)	759
BshFI	GGCC	3 cut(s)	259, 1145, 2009
BsiEI	CGRYCG	1 cut(s)	759
BsiHKAI	GWGCWC	1 cut(s)	23
BsiHKCI	CYCGRG	1 cut(s)	1404
BslFI	GGGAC	2 cut(s)	324, 1855
BslI	CCNNNNNNNGG	4 cut(s)	625, 700, 1459, 1753
BsmAI	GTCTC	6 cut(s)	95, 147, 579, 1554, 1733, 1737
BsmBI	CGTCTC	1 cut(s)	147
BsmFI	GGGAC	2 cut(s)	324, 1855
BsnI	GGCC	3 cut(s)	259, 1145, 2009
Bso31I	GGTCTC	2 cut(s)	95, 579
BsoBI	CYCGRG	1 cut(s)	1404
Bsp119I	TTCGAA	2 cut(s)	823, 1340
Bsp1286I	GDGCHC	2 cut(s)	23, 241
Bsp1407I	TGTACA	1 cut(s)	1379
Bsp143I	GATC	4 cut(s)	172, 756, 1398, 2056
Bsp1720I	GCTNAGC	1 cut(s)	1119
BspACI	CCGC	3 cut(s)	261, 1622, 2026
BspANI	GGCC	3 cut(s)	259, 1145, 2009
BspHI	TCATGA	2 cut(s)	1579, 1938
BspLI	GGNNCC	1 cut(s)	1451
BspMAI	CTGCAG	3 cut(s)	1446, 1504, 1593
BspQI	GCTCTTC	2 cut(s)	558, 841
BspT104I	TTCGAA	2 cut(s)	823, 1340
BspTNI	GGTCTC	2 cut(s)	95, 579
BsrDI	GCAATG	1 cut(s)	18
BsrGI	TGTACA	1 cut(s)	1379
BsrI	ACTGG	2 cut(s)	522, 1429
BssECI	CCNNGG	3 cut(s)	254, 619, 2010
BssMI	GATC	4 cut(s)	172, 756, 1398, 2056
BssSI	CACGAG	1 cut(s)	1224
BssT1I	CCWWGG	2 cut(s)	619, 2010
Bst2BI	CACGAG	1 cut(s)	1224
Bst2UI	CCWGG	2 cut(s)	256, 1748
Bst4CI	ACNGT	6 cut(s)	916, 988, 1009, 1271, 1365, 2110
Bst6I	CTCTTC	9 cut(s)	558, 841, 971, 1269, 1524, 1644, 1746, 1967, 1986
BstAPI	GCANNNNNTGC	1 cut(s)	1568
BstAUI	TGTACA	1 cut(s)	1379
BstBAI	YACGTR	1 cut(s)	1907
BstBI	TTCGAA	2 cut(s)	823, 1340
BstC8I	GCNNGC	5 cut(s)	261, 542, 1176, 1497, 1589
BstENI	CCTNNNNNAGG	4 cut(s)	623, 698, 1457, 1751
BstF5I	GGATG	6 cut(s)	526, 904, 997, 1088, 1120, 1892
BstHHI	GCGC	1 cut(s)	150
BstKTI	GATC	4 cut(s)	175, 759, 1401, 2059
BstMAI	GTCTC	6 cut(s)	95, 147, 579, 1554, 1733, 1737
BstMBI	GATC	4 cut(s)	172, 756, 1398, 2056
BstMCI	CGRYCG	1 cut(s)	759
BstMWI	GCNNNNNNNGC	7 cut(s)	177, 431, 482, 1115, 1568, 1628, 2099
BstNI	CCWGG	2 cut(s)	256, 1748
BstSCI	CCNGG	2 cut(s)	254, 1746
BstSFI	CTRYAG	3 cut(s)	1442, 1500, 1589
BstV1I	GCAGC	8 cut(s)	338, 463, 1118, 1140, 1486, 1524, 1574, 2128
BstV2I	GAAGAC	3 cut(s)	1014, 1529, 1851
BstX2I	RGATCY	2 cut(s)	1398, 2056
BstXI	CCANNNNNNTGG	1 cut(s)	517
BstYI	RGATCY	2 cut(s)	1398, 2056
BsuRI	GGCC	3 cut(s)	259, 1145, 2009
BtsCI	GGATG	6 cut(s)	526, 904, 997, 1088, 1120, 1892
BtsI	GCAGTG	2 cut(s)	1439, 1509
BtsIMutI	CAGTG	5 cut(s)	984, 1276, 1439, 1509, 2106
Cac8I	GCNNGC	5 cut(s)	261, 542, 1176, 1497, 1589
CciI	TCATGA	2 cut(s)	1579, 1938
CfoI	GCGC	1 cut(s)	150
Cfr13I	GGNCC	4 cut(s)	157, 258, 616, 1144
Csp6I	GTAC	2 cut(s)	606, 1380
CviAII	CATG	5 cut(s)	176, 242, 1289, 1580, 1939
CviQI	GTAC	2 cut(s)	606, 1380
DpnI	GATC	4 cut(s)	174, 758, 1400, 2058
DpnII	GATC	4 cut(s)	172, 756, 1398, 2056
DraI	TTTAAA	1 cut(s)	1644
EaeI	YGGCCR	1 cut(s)	2007
Eam1104I	CTCTTC	9 cut(s)	558, 841, 971, 1269, 1524, 1644, 1746, 1967, 1986
EarI	CTCTTC	9 cut(s)	558, 841, 971, 1269, 1524, 1644, 1746, 1967, 1986
Eco130I	CCWWGG	2 cut(s)	619, 2010
Eco24I	GRGCYC	1 cut(s)	241
Eco31I	GGTCTC	2 cut(s)	95, 579
Eco47I	GGWCC	2 cut(s)	157, 616
Eco57I	CTGAAG	4 cut(s)	821, 971, 1133, 2115
Eco72I	CACGTG	1 cut(s)	1907
Eco88I	CYCGRG	1 cut(s)	1404
EcoNI	CCTNNNNNAGG	4 cut(s)	623, 698, 1457, 1751
EcoO109I	RGGNCCY	2 cut(s)	157, 1144
EcoRI	GAATTC	1 cut(s)	1000
EcoRII	CCWGG	2 cut(s)	254, 1746
EcoT14I	CCWWGG	2 cut(s)	619, 2010
EcoT22I	ATGCAT	2 cut(s)	1264, 1792
EcoT38I	GRGCYC	1 cut(s)	241
ErhI	CCWWGG	2 cut(s)	619, 2010
Esp3I	CGTCTC	1 cut(s)	147
FaeI	CATG	5 cut(s)	179, 245, 1292, 1583, 1942
FalI	AAGNNNNNCTT	2 cut(s)	1223, 1255
FaqI	GGGAC	2 cut(s)	324, 1855
FatI	CATG	5 cut(s)	175, 241, 1288, 1579, 1938
FauI	CCCGC	1 cut(s)	268
Fnu4HI	GCNGC	9 cut(s)	327, 477, 1107, 1154, 1500, 1538, 1563, 2027, 2142
FokI	GGATG	6 cut(s)	533, 911, 1004, 1075, 1127, 1879
FriOI	GRGCYC	1 cut(s)	241
Fsp4HI	GCNGC	9 cut(s)	327, 477, 1107, 1154, 1500, 1538, 1563, 2027, 2142
FspBI	CTAG	6 cut(s)	620, 894, 905, 1326, 1454, 1559
GlaI	GCGC	1 cut(s)	149
GluI	GCNGC	9 cut(s)	327, 477, 1107, 1154, 1500, 1538, 1563, 2027, 2142
GsuI	CTGGAG	4 cut(s)	270, 1446, 1715, 1988
HaeIII	GGCC	3 cut(s)	259, 1145, 2009
HhaI	GCGC	1 cut(s)	150
Hin1II	CATG	5 cut(s)	179, 245, 1292, 1583, 1942
Hin6I	GCGC	1 cut(s)	148
HinP1I	GCGC	1 cut(s)	148
HindIII	AAGCTT	4 cut(s)	1049, 1121, 1335, 1629
HinfI	GANTC	9 cut(s)	283, 443, 506, 955, 1187, 1342, 1436, 1963, 2147
HphI	GGTGA	3 cut(s)	1046, 1487, 2027
Hpy166II	GTNNAC	3 cut(s)	616, 1380, 1422
Hpy188I	TCNGA	7 cut(s)	411, 796, 922, 1027, 1083, 1711, 2152
Hpy8I	GTNNAC	3 cut(s)	616, 1380, 1422
Hpy99I	CGWCG	1 cut(s)	170
HpyCH4III	ACNGT	6 cut(s)	916, 988, 1009, 1271, 1365, 2110
HpyCH4IV	ACGT	1 cut(s)	1906
HpyF10VI	GCNNNNNNNGC	7 cut(s)	177, 431, 482, 1115, 1568, 1628, 2099
HpySE526I	ACGT	1 cut(s)	1906
Hsp92II	CATG	5 cut(s)	179, 245, 1292, 1583, 1942
HspAI	GCGC	1 cut(s)	148
Kzo9I	GATC	4 cut(s)	172, 756, 1398, 2056
LguI	GCTCTTC	2 cut(s)	558, 841
LmnI	GCTCC	8 cut(s)	18, 537, 628, 658, 753, 1449, 1534, 1657
Lsp1109I	GCAGC	8 cut(s)	338, 463, 1118, 1140, 1486, 1524, 1574, 2128
LweI	GCATC	8 cut(s)	238, 313, 421, 1045, 1105, 1901, 1912, 2012
MaeI	CTAG	6 cut(s)	620, 894, 905, 1326, 1454, 1559
MaeII	ACGT	1 cut(s)	1906
MaeIII	GTNAC	3 cut(s)	1764, 2104, 2110
MalI	GATC	4 cut(s)	174, 758, 1400, 2058
MboI	GATC	4 cut(s)	172, 756, 1398, 2056
MflI	RGATCY	2 cut(s)	1398, 2056
MhlI	GDGCHC	2 cut(s)	23, 241
MlyI	GAGTC	3 cut(s)	277, 1181, 1972
MmeI	TCCRAC	1 cut(s)	1233
Mph1103I	ATGCAT	2 cut(s)	1264, 1792
MspA1I	CMGCKG	4 cut(s)	460, 1153, 1565, 1622
MspR9I	CCNGG	2 cut(s)	256, 1748
MvaI	CCWGG	2 cut(s)	256, 1748
MwoI	GCNNNNNNNGC	7 cut(s)	177, 431, 482, 1115, 1568, 1628, 2099
NdeII	GATC	4 cut(s)	172, 756, 1398, 2056
NlaIII	CATG	5 cut(s)	179, 245, 1292, 1583, 1942
NlaIV	GGNNCC	1 cut(s)	1451
NmuCI	GTSAC	2 cut(s)	1764, 2104
NsiI	ATGCAT	2 cut(s)	1264, 1792
NspV	TTCGAA	2 cut(s)	823, 1340
PagI	TCATGA	2 cut(s)	1579, 1938
PciSI	GCTCTTC	2 cut(s)	558, 841
PfeI	GAWTC	6 cut(s)	443, 506, 955, 1342, 1436, 2147
PkrI	GCNGC	9 cut(s)	328, 478, 1108, 1155, 1501, 1539, 1564, 2028, 2143
Ple19I	CGATCG	1 cut(s)	759
PleI	GAGTC	3 cut(s)	277, 1181, 1971
PmaCI	CACGTG	1 cut(s)	1907
PmlI	CACGTG	1 cut(s)	1907
PpsI	GAGTC	3 cut(s)	277, 1181, 1971
Ppu21I	YACGTR	1 cut(s)	1907
PpuMI	RGGWCCY	1 cut(s)	157
PshBI	ATTAAT	2 cut(s)	780, 1793
Psp5II	RGGWCCY	1 cut(s)	157
Psp6I	CCWGG	2 cut(s)	254, 1746
PspCI	CACGTG	1 cut(s)	1907
PspGI	CCWGG	2 cut(s)	254, 1746
PspN4I	GGNNCC	1 cut(s)	1451
PspPI	GGNCC	4 cut(s)	157, 258, 616, 1144
PspPPI	RGGWCCY	1 cut(s)	157
PstI	CTGCAG	3 cut(s)	1446, 1504, 1593
PsuI	RGATCY	2 cut(s)	1398, 2056
PvuI	CGATCG	1 cut(s)	759
PvuII	CAGCTG	3 cut(s)	460, 1153, 1565
RsaI	GTAC	2 cut(s)	607, 1381
RsaNI	GTAC	2 cut(s)	606, 1380
SapI	GCTCTTC	2 cut(s)	558, 841
SatI	GCNGC	9 cut(s)	327, 477, 1107, 1154, 1500, 1538, 1563, 2027, 2142
Sau3AI	GATC	4 cut(s)	172, 756, 1398, 2056
Sau96I	GGNCC	4 cut(s)	157, 258, 616, 1144
ScaI	AGTACT	1 cut(s)	607
SchI	GAGTC	3 cut(s)	277, 1181, 1972
ScrFI	CCNGG	2 cut(s)	256, 1748
SduI	GDGCHC	2 cut(s)	23, 241
SfaNI	GCATC	8 cut(s)	238, 313, 421, 1045, 1105, 1901, 1912, 2012
SfcI	CTRYAG	3 cut(s)	1442, 1500, 1589
SfuI	TTCGAA	2 cut(s)	823, 1340
SinI	GGWCC	2 cut(s)	157, 616
SmlI	CTYRAG	4 cut(s)	1169, 1189, 1240, 1736
SmoI	CTYRAG	4 cut(s)	1169, 1189, 1240, 1736
SsiI	CCGC	3 cut(s)	261, 1622, 2026
SspI	AATATT	1 cut(s)	2022
SspMI	CTAG	6 cut(s)	620, 894, 905, 1326, 1454, 1559
StyD4I	CCNGG	2 cut(s)	254, 1746
StyI	CCWWGG	2 cut(s)	619, 2010
TaaI	ACNGT	6 cut(s)	916, 988, 1009, 1271, 1365, 2110
TaiI	ACGT	1 cut(s)	1909
TaqI	TCGA	6 cut(s)	55, 708, 755, 759, 823, 1340
TatI	WGTACW	2 cut(s)	605, 1379
TauI	GCSGC	1 cut(s)	2029
TfiI	GAWTC	6 cut(s)	443, 506, 955, 1342, 1436, 2147
TscAI	CASTG	5 cut(s)	991, 1276, 1446, 1509, 2113
TseFI	GTSAC	2 cut(s)	1764, 2104
TseI	GCWGC	8 cut(s)	326, 476, 1106, 1153, 1499, 1537, 1562, 2141
Tsp45I	GTSAC	2 cut(s)	1764, 2104
TspRI	CASTG	5 cut(s)	991, 1276, 1446, 1509, 2113
VpaK11BI	GGWCC	2 cut(s)	157, 616
VspI	ATTAAT	2 cut(s)	780, 1793
XagI	CCTNNNNNAGG	4 cut(s)	623, 698, 1457, 1751
XapI	RAATTY	4 cut(s)	592, 666, 1000, 1372
XbaI	TCTAGA	1 cut(s)	1325
XmaJI	CCTAGG	1 cut(s)	619
XspI	CTAG	6 cut(s)	620, 894, 905, 1326, 1454, 1559
ZrmI	AGTACT	1 cut(s)	607
Zsp2I	ATGCAT	2 cut(s)	1264, 1792

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.