Rmu_sc0008635.1_g000002

MAR-binding filament-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008635.1
Physical Location & Seq
Reverse (-)
15543 .. 19366
3824 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008635.1_g000002.1.cds

Sequence Viewer

Length: 2022 bp
atgtcgtctctgcgccaagaggacctcaacgacggcgatcatggcaagaggagggctattctctttgtgggtatctcagttcttccactattgcatctcagggctcatgcttttgaagccttgcccgctaaagaaattgagccaaagactccagacaagaacataaaggcagagggactgcaaggagatgcagcaccaaatcccattttgtctatcctgaatggtattggtattttcagctctggtgtcatcggtgcgttttatggattggctcagaaagaaaagaaagctactgatgcaatagtagaatctatgaagaaccagctgaaagaaaaggaagctgctattgcttcattggagaagaactttgaatccaagctactggatgaacaggaagaaaggagcaagcaacttggaaaggcaaaggaagagcagaggtctctaacagaccaactaaattcagcaaagagtactattgtggacctagggaaggagctaaatagtgagaagaagttgattgaggagcttaaaattcaaagtgaaagccttaaaacaaacctttcaaaggctatcgaagataaggtagagcttgaagaaagtttgaaggcaaagctccactcgatcgaagatttgcagggaaggattaatttactcaattcagaactgaaggacagagaaagtaatgttcgaagccttagctcttctctcgcagaaaaggatttggagttgaaggacttaaaaactacctacaagcaaactagggatgaactagctcatgcagtttcagatattcaacaattaaaagttgaactcctgaagaatcaaaaggaattggaattgaagagttccactgtggatgaattgaattcaacagtaagttctttgtcttctcagaaaggtgattttaagaggaagcttgatgctattcaggaggaatacaataatctgaaatcatcctctggaaaaaaggcagctttggatgctaagcttttgggagaaaaagatgaggcccttcagctgctaaaggaaaaacttgagcttgcattgactgactcaagtagaagcaaacagataactgctgatttgacccgagagaaggaaaccttgagggaaacgttggataatgcattgaacagtgaagagagcttgaaacatgaactccacatcactcaggaagctcttggaaaatctagaaatgaagcttcgaatctggaacatcaattaaaacagtcaaaaaatttgtgtacagaacttgaagctgagatctctcgggttcaggctgagtttactggagttagggaatcactgcagaggagcctagatgaggctacatcaagtggtgacgtgattgctactgagcttgctgcagtgaaagaacttctaaagaagacagaagaggagctgcaaagtgtgtctcatcaactagcagctgttgcagaaaatcatgatagcctgcagaatgaattggttgatgtatataaaacagctgccaaagcttctaatgatttaaaagaagagaaggagcgagtttcttctcttaaaaaagaacttcaaactctggagaagcaaatctcagagaacaagaagtcccagaagtctcttgagacagacctggaagaggctacaaagtcacttgatgagatgaaccgaaatgcattaatactttccaaagagttagagaaggctaattctctaatttctaaccttgaagatgagaaagaggtgttttacaagtccctaaaagagcaaaagactgcatccaaagaggcacgtgaaaatatggaagatgcccataatcttgtcatgaaacttggcaaggaaagggagagtctggagaagagagcaaagaaaatggaagaggagttggcatctgccaagggtgaaatattgcggctgaggagtaaaataaaatcgtctaaagatcttgtaaataatgagaaaccacagaaagttgaggctgaaggtgctgtcactgttactgcaaagagaggtaggaggagaaaggctgctgaatcagagtga

Protein Analysis

673

Amino Acids

75.27

Weight (kDa)

5.65

Isoelectric Point (pI)

48.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 126, 1891
AclI AACGTT 1 cut(s) 1115
AcsI RAATTY 4 cut(s) 457, 531, 865, 1237
AcuI CTGAAG 4 cut(s) 686, 836, 998, 1980
AcvI CACGTG 1 cut(s) 1772
AfaI GTAC 2 cut(s) 472, 1246
AfiI CCNNNNNNNGG 5 cut(s) 490, 565, 1096, 1324, 1618
AjiI CACGTC 1 cut(s) 1345
AjnI CCWGG 1 cut(s) 1611
AloI GAACNNNNNNTCC 4 cut(s) 356, 388, 1571, 1603
Alw26I GTCTC 5 cut(s) 12, 444, 1419, 1598, 1602
Ama87I CYCGRG 2 cut(s) 1089, 1269
AoxI GGCC 1 cut(s) 1008
ApeKI GCWGC 9 cut(s) 191, 341, 971, 1018, 1364, 1402, 1427, 1487, 2006
ApoI RAATTY 4 cut(s) 457, 531, 865, 1237
AseI ATTAAT 2 cut(s) 645, 1658
AspA2I CCTAGG 1 cut(s) 484
AspLEI GCGC 1 cut(s) 15
AspS9I GGNCC 3 cut(s) 22, 481, 1009
AsuHPI GGTGA 3 cut(s) 911, 1352, 1892
AsuII TTCGAA 2 cut(s) 688, 1205
AvaI CYCGRG 2 cut(s) 1089, 1269
AvaII GGWCC 2 cut(s) 22, 481
AvrII CCTAGG 1 cut(s) 484
BanII GRGCYC 1 cut(s) 106
BbrPI CACGTG 1 cut(s) 1772
BbsI GAAGAC 2 cut(s) 879, 1394
BbvCI CCTCAGC 1 cut(s) 1895
BbvI GCAGC 9 cut(s) 203, 328, 983, 1005, 1351, 1389, 1439, 1474, 1993
BceAI ACGGC 1 cut(s) 49
BciT130I CCWGG 1 cut(s) 1613
BcoDI GTCTC 5 cut(s) 12, 444, 1419, 1598, 1602
BfaI CTAG 6 cut(s) 485, 759, 770, 1191, 1319, 1424
BfmI CTRYAG 3 cut(s) 1307, 1365, 1454
BglII AGATCT 2 cut(s) 1263, 1921
BlnI CCTAGG 1 cut(s) 484
BlpI GCTNAGC 1 cut(s) 984
BmcAI AGTACT 1 cut(s) 472
Bme1390I CCNGG 1 cut(s) 1613
Bme18I GGWCC 2 cut(s) 22, 481
BmeT110I CYCGRG 2 cut(s) 1089, 1269
BmgBI CACGTC 1 cut(s) 1345
BmgT120I GGNCC 3 cut(s) 22, 481, 1009
BmiI GGNNCC 1 cut(s) 1316
BmrFI CCNGG 1 cut(s) 1613
BmsI GCATC 8 cut(s) 103, 178, 286, 910, 970, 1766, 1777, 1877
BpiI GAAGAC 2 cut(s) 879, 1394
BpmI CTGGAG 4 cut(s) 135, 1311, 1580, 1853
Bpu10I CCTNAGC 2 cut(s) 695, 1895
Bpu1102I GCTNAGC 1 cut(s) 984
Bpu14I TTCGAA 2 cut(s) 688, 1205
BpuEI CTTGAG 4 cut(s) 1039, 1055, 1126, 1622
BsaAI YACGTR 1 cut(s) 1772
BsaI GGTCTC 1 cut(s) 444
BsaJI CCNNGG 2 cut(s) 484, 1875
BsaXI ACNNNNNCTCC 2 cut(s) 1143, 1173
Bsc4I CCNNNNNNNGG 5 cut(s) 490, 565, 1096, 1324, 1618
Bse1I ACTGG 2 cut(s) 387, 1294
BseBI CCWGG 1 cut(s) 1613
BseDI CCNNGG 2 cut(s) 484, 1875
BseGI GGATG 6 cut(s) 391, 769, 862, 953, 985, 1757
BseLI CCNNNNNNNGG 5 cut(s) 490, 565, 1096, 1324, 1618
BseNI ACTGG 2 cut(s) 387, 1294
BseRI GAGGAG 7 cut(s) 64, 536, 1327, 1412, 1874, 1912, 2011
BseXI GCAGC 9 cut(s) 203, 328, 983, 1005, 1351, 1389, 1439, 1474, 1993
Bsh1285I CGRYCG 1 cut(s) 624
BshFI GGCC 1 cut(s) 1010
BsiEI CGRYCG 1 cut(s) 624
BsiHKCI CYCGRG 2 cut(s) 1089, 1269
BslFI GGGAC 3 cut(s) 189, 1573, 1720
BslI CCNNNNNNNGG 5 cut(s) 490, 565, 1096, 1324, 1618
BsmAI GTCTC 5 cut(s) 12, 444, 1419, 1598, 1602
BsmBI CGTCTC 1 cut(s) 12
BsmFI GGGAC 3 cut(s) 189, 1573, 1720
BsnI GGCC 1 cut(s) 1010
Bso31I GGTCTC 1 cut(s) 444
BsoBI CYCGRG 2 cut(s) 1089, 1269
Bsp119I TTCGAA 2 cut(s) 688, 1205
Bsp1286I GDGCHC 1 cut(s) 106
Bsp1407I TGTACA 1 cut(s) 1244
Bsp143I GATC 4 cut(s) 37, 621, 1263, 1921
Bsp1720I GCTNAGC 1 cut(s) 984
BspACI CCGC 2 cut(s) 126, 1891
BspANI GGCC 1 cut(s) 1010
BspHI TCATGA 2 cut(s) 1444, 1803
BspLI GGNNCC 1 cut(s) 1316
BspMAI CTGCAG 3 cut(s) 1311, 1369, 1458
BspQI GCTCTTC 2 cut(s) 423, 706
BspT104I TTCGAA 2 cut(s) 688, 1205
BspTNI GGTCTC 1 cut(s) 444
BsrGI TGTACA 1 cut(s) 1244
BsrI ACTGG 2 cut(s) 387, 1294
BssECI CCNNGG 2 cut(s) 484, 1875
BssMI GATC 4 cut(s) 37, 621, 1263, 1921
BssT1I CCWWGG 2 cut(s) 484, 1875
Bst2UI CCWGG 1 cut(s) 1613
Bst4CI ACNGT 5 cut(s) 853, 874, 1136, 1230, 1975
Bst6I CTCTTC 9 cut(s) 423, 706, 836, 1134, 1389, 1509, 1611, 1832, 1851
BstAPI GCANNNNNTGC 1 cut(s) 1433
BstAUI TGTACA 1 cut(s) 1244
BstBAI YACGTR 1 cut(s) 1772
BstBI TTCGAA 2 cut(s) 688, 1205
BstC8I GCNNGC 5 cut(s) 126, 407, 1041, 1362, 1454
BstENI CCTNNNNNAGG 4 cut(s) 488, 563, 1322, 1616
BstF5I GGATG 6 cut(s) 391, 769, 862, 953, 985, 1757
BstHHI GCGC 1 cut(s) 15
BstKTI GATC 4 cut(s) 40, 624, 1266, 1924
BstMAI GTCTC 5 cut(s) 12, 444, 1419, 1598, 1602
BstMBI GATC 4 cut(s) 37, 621, 1263, 1921
BstMCI CGRYCG 1 cut(s) 624
BstMWI GCNNNNNNNGC 9 cut(s) 42, 116, 125, 296, 347, 980, 1433, 1493, 1964
BstNI CCWGG 1 cut(s) 1613
BstSCI CCNGG 1 cut(s) 1611
BstSFI CTRYAG 3 cut(s) 1307, 1365, 1454
BstV1I GCAGC 9 cut(s) 203, 328, 983, 1005, 1351, 1389, 1439, 1474, 1993
BstV2I GAAGAC 2 cut(s) 879, 1394
BstX2I RGATCY 2 cut(s) 1263, 1921
BstXI CCANNNNNNTGG 1 cut(s) 382
BstYI RGATCY 2 cut(s) 1263, 1921
BsuRI GGCC 1 cut(s) 1010
BtrI CACGTC 1 cut(s) 1345
BtsCI GGATG 6 cut(s) 391, 769, 862, 953, 985, 1757
BtsI GCAGTG 2 cut(s) 1304, 1374
BtsIMutI CAGTG 5 cut(s) 849, 1141, 1304, 1374, 1971
Cac8I GCNNGC 5 cut(s) 126, 407, 1041, 1362, 1454
CciI TCATGA 2 cut(s) 1444, 1803
CfoI GCGC 1 cut(s) 15
Cfr13I GGNCC 3 cut(s) 22, 481, 1009
Csp6I GTAC 2 cut(s) 471, 1245
CviAII CATG 6 cut(s) 41, 107, 776, 1154, 1445, 1804
CviQI GTAC 2 cut(s) 471, 1245
DpnI GATC 4 cut(s) 39, 623, 1265, 1923
DpnII GATC 4 cut(s) 37, 621, 1263, 1921
DraI TTTAAA 1 cut(s) 1509
Eam1104I CTCTTC 9 cut(s) 423, 706, 836, 1134, 1389, 1509, 1611, 1832, 1851
EarI CTCTTC 9 cut(s) 423, 706, 836, 1134, 1389, 1509, 1611, 1832, 1851
Eco130I CCWWGG 2 cut(s) 484, 1875
Eco24I GRGCYC 1 cut(s) 106
Eco31I GGTCTC 1 cut(s) 444
Eco47I GGWCC 2 cut(s) 22, 481
Eco57I CTGAAG 4 cut(s) 686, 836, 998, 1980
Eco72I CACGTG 1 cut(s) 1772
Eco88I CYCGRG 2 cut(s) 1089, 1269
EcoNI CCTNNNNNAGG 4 cut(s) 488, 563, 1322, 1616
EcoO109I RGGNCCY 2 cut(s) 22, 1009
EcoRI GAATTC 1 cut(s) 865
EcoRII CCWGG 1 cut(s) 1611
EcoT14I CCWWGG 2 cut(s) 484, 1875
EcoT22I ATGCAT 2 cut(s) 1129, 1657
EcoT38I GRGCYC 1 cut(s) 106
ErhI CCWWGG 2 cut(s) 484, 1875
Esp3I CGTCTC 1 cut(s) 12
FaeI CATG 6 cut(s) 44, 110, 779, 1157, 1448, 1807
FalI AAGNNNNNCTT 2 cut(s) 1088, 1120
FaqI GGGAC 3 cut(s) 189, 1573, 1720
FatI CATG 6 cut(s) 40, 106, 775, 1153, 1444, 1803
FauI CCCGC 1 cut(s) 133
FokI GGATG 6 cut(s) 398, 776, 869, 940, 992, 1744
FriOI GRGCYC 1 cut(s) 106
FspBI CTAG 6 cut(s) 485, 759, 770, 1191, 1319, 1424
GlaI GCGC 1 cut(s) 14
GsuI CTGGAG 4 cut(s) 135, 1311, 1580, 1853
HaeIII GGCC 1 cut(s) 1010
HhaI GCGC 1 cut(s) 15
Hin1II CATG 6 cut(s) 44, 110, 779, 1157, 1448, 1807
Hin6I GCGC 1 cut(s) 13
HinP1I GCGC 1 cut(s) 13
HindIII AAGCTT 4 cut(s) 914, 986, 1200, 1494
HinfI GANTC 9 cut(s) 148, 308, 371, 820, 1052, 1207, 1301, 1828, 2012
HphI GGTGA 3 cut(s) 911, 1352, 1892
Hpy166II GTNNAC 3 cut(s) 481, 1245, 1287
Hpy188I TCNGA 7 cut(s) 276, 661, 787, 894, 948, 1576, 2017
Hpy8I GTNNAC 3 cut(s) 481, 1245, 1287
Hpy99I CGWCG 1 cut(s) 35
HpyCH4III ACNGT 5 cut(s) 853, 874, 1136, 1230, 1975
HpyCH4IV ACGT 3 cut(s) 1115, 1344, 1771
HpyF10VI GCNNNNNNNGC 9 cut(s) 42, 116, 125, 296, 347, 980, 1433, 1493, 1964
HpySE526I ACGT 3 cut(s) 1115, 1344, 1771
Hsp92II CATG 6 cut(s) 44, 110, 779, 1157, 1448, 1807
HspAI GCGC 1 cut(s) 13
Kzo9I GATC 4 cut(s) 37, 621, 1263, 1921
LguI GCTCTTC 2 cut(s) 423, 706
LmnI GCTCC 7 cut(s) 402, 493, 523, 618, 1314, 1399, 1522
Lsp1109I GCAGC 9 cut(s) 203, 328, 983, 1005, 1351, 1389, 1439, 1474, 1993
LweI GCATC 8 cut(s) 103, 178, 286, 910, 970, 1766, 1777, 1877
MaeI CTAG 6 cut(s) 485, 759, 770, 1191, 1319, 1424
MaeII ACGT 3 cut(s) 1115, 1344, 1771
MaeIII GTNAC 4 cut(s) 1340, 1629, 1969, 1975
MalI GATC 4 cut(s) 39, 623, 1265, 1923
MboI GATC 4 cut(s) 37, 621, 1263, 1921
MflI RGATCY 2 cut(s) 1263, 1921
MhlI GDGCHC 1 cut(s) 106
MlyI GAGTC 3 cut(s) 142, 1046, 1837
MmeI TCCRAC 1 cut(s) 1098
Mph1103I ATGCAT 2 cut(s) 1129, 1657
MspA1I CMGCKG 4 cut(s) 325, 1018, 1430, 1487
MspR9I CCNGG 1 cut(s) 1613
MvaI CCWGG 1 cut(s) 1613
MwoI GCNNNNNNNGC 9 cut(s) 42, 116, 125, 296, 347, 980, 1433, 1493, 1964
NdeII GATC 4 cut(s) 37, 621, 1263, 1921
NlaIII CATG 6 cut(s) 44, 110, 779, 1157, 1448, 1807
NlaIV GGNNCC 1 cut(s) 1316
NmuCI GTSAC 3 cut(s) 1340, 1629, 1969
NsiI ATGCAT 2 cut(s) 1129, 1657
NspV TTCGAA 2 cut(s) 688, 1205
PagI TCATGA 2 cut(s) 1444, 1803
PciSI GCTCTTC 2 cut(s) 423, 706
PfeI GAWTC 6 cut(s) 308, 371, 820, 1207, 1301, 2012
Ple19I CGATCG 1 cut(s) 624
PleI GAGTC 3 cut(s) 142, 1046, 1836
PmaCI CACGTG 1 cut(s) 1772
PmlI CACGTG 1 cut(s) 1772
PpsI GAGTC 3 cut(s) 142, 1046, 1836
Ppu21I YACGTR 1 cut(s) 1772
PpuMI RGGWCCY 1 cut(s) 22
PshBI ATTAAT 2 cut(s) 645, 1658
Psp1406I AACGTT 1 cut(s) 1115
Psp5II RGGWCCY 1 cut(s) 22
Psp6I CCWGG 1 cut(s) 1611
PspCI CACGTG 1 cut(s) 1772
PspGI CCWGG 1 cut(s) 1611
PspN4I GGNNCC 1 cut(s) 1316
PspPI GGNCC 3 cut(s) 22, 481, 1009
PspPPI RGGWCCY 1 cut(s) 22
PstI CTGCAG 3 cut(s) 1311, 1369, 1458
PsuI RGATCY 2 cut(s) 1263, 1921
PvuI CGATCG 1 cut(s) 624
PvuII CAGCTG 4 cut(s) 325, 1018, 1430, 1487
RsaI GTAC 2 cut(s) 472, 1246
RsaNI GTAC 2 cut(s) 471, 1245
SapI GCTCTTC 2 cut(s) 423, 706
Sau3AI GATC 4 cut(s) 37, 621, 1263, 1921
Sau96I GGNCC 3 cut(s) 22, 481, 1009
ScaI AGTACT 1 cut(s) 472
SchI GAGTC 3 cut(s) 142, 1046, 1837
ScrFI CCNGG 1 cut(s) 1613
SduI GDGCHC 1 cut(s) 106
SfaNI GCATC 8 cut(s) 103, 178, 286, 910, 970, 1766, 1777, 1877
SfcI CTRYAG 3 cut(s) 1307, 1365, 1454
SfuI TTCGAA 2 cut(s) 688, 1205
SinI GGWCC 2 cut(s) 22, 481
SmlI CTYRAG 4 cut(s) 1034, 1054, 1105, 1601
SmoI CTYRAG 4 cut(s) 1034, 1054, 1105, 1601
SsiI CCGC 2 cut(s) 126, 1891
SspI AATATT 1 cut(s) 1887
SspMI CTAG 6 cut(s) 485, 759, 770, 1191, 1319, 1424
StyD4I CCNGG 1 cut(s) 1611
StyI CCWWGG 2 cut(s) 484, 1875
TaaI ACNGT 5 cut(s) 853, 874, 1136, 1230, 1975
TaiI ACGT 3 cut(s) 1118, 1347, 1774
TaqI TCGA 5 cut(s) 573, 620, 624, 688, 1205
TatI WGTACW 2 cut(s) 470, 1244
TauI GCSGC 1 cut(s) 1894
TfiI GAWTC 6 cut(s) 308, 371, 820, 1207, 1301, 2012
TscAI CASTG 5 cut(s) 856, 1141, 1311, 1374, 1978
TseFI GTSAC 3 cut(s) 1340, 1629, 1969
TseI GCWGC 9 cut(s) 191, 341, 971, 1018, 1364, 1402, 1427, 1487, 2006
Tsp45I GTSAC 3 cut(s) 1340, 1629, 1969
TspRI CASTG 5 cut(s) 856, 1141, 1311, 1374, 1978
VpaK11BI GGWCC 2 cut(s) 22, 481
VspI ATTAAT 2 cut(s) 645, 1658
XagI CCTNNNNNAGG 4 cut(s) 488, 563, 1322, 1616
XapI RAATTY 4 cut(s) 457, 531, 865, 1237
XbaI TCTAGA 1 cut(s) 1190
XmaJI CCTAGG 1 cut(s) 484
XspI CTAG 6 cut(s) 485, 759, 770, 1191, 1319, 1424
ZrmI AGTACT 1 cut(s) 472
Zsp2I ATGCAT 2 cut(s) 1129, 1657
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.