Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0003151

Physical Location & Seq

Genomic Coordinates Forward (+)

4836332 .. 4845974

Gene Structure 9643 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G067700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2418 bp

ATGGAGCAGCAGCAGCATCAGCTAACGAATTGCAGCACATGGTCCACTGCTCCCAAGCTCCATCATCTTCTTCACCAAAACCCCCAACGCATTGCTTTTTCCAATGGAAGGCGCCAAAAGTCGAATCAGAAGAAGAAGAGTCTGAATTGGCGGATGCGAGGGTTTGGCAATGAGACTCCGGTGTTGGTGGTGAAGGCAAGTAATGGAGGGGCAGGGACTGATGTGGTGGAGACTGCGGTCGTCGACAGGCCAAAACTGCGTCGTTTTCAGGTGTCCCAGGGTCATCCCAGCCCGTTCGGTGCCACAACGCGCGATGGTGGGGTTAACTTCGCTGTTTATTCCGCCAATGCGGTTTCGGTTACTCTCTGTTTGATCACTCTCTCCGATTTAGAGGAGGATAAAGTTACTGAGCAGTTATCTCTTGATCCTTTGACCAACAAGACTGGAAATGTGTGGCATGTGTTTCTGAAGGGAGATTTCAAAGATACACTTTACGGATATAAATTCGAAGGGAAGTTTTCTCCTGAAGAGGGACTTTACTATGACTCTTCTAAGATTGTGTTGGATCCTTATGCAAAGGCAGTTATACGCAGAGGGGAATATGGGAAGCTAAGTCCTGATGGTAATTGCTGGCCTCAAATGGCCGGCACGGTACCTTCTTTTGATGATGAGTTTGACTGGGAAGGAGATTTACCGCTGAATTATCCACAAAAAGATCTTATCATATATGAAATCCATGTGCGAGGGTTCACAAGGCATGAGTCAAGCATGGCTGAATTGCCTGGTACATACCTTGGTTTGGTGGAGAAGCTTGATCACTTAAAGGAGCTTGGGATCAACTGTATAGAGTTAATGCCATGTCATGAGTTCAATGAGCTGGAGTACTTCGGCTACAATTCTGTCTTGGGTGACTACAAGGTAAATTTTTGGGGATACTCAACTGTCAATTACTTTTCACCAATGATAAGATATTCATCTGCTGGCATACGTAATTGTGGCCGTGATGCAATAAATGAAGTCAAGTTTCTTATTAAAGAAGCACATAAACGTGGAATTGAGGTGATCATGGATGTTGTCTTCAATCACACAGCTGAAGGGAATGAAAATGGTCCAATTTTGTCTTTTAGAGGCGCTGATAATAGTATCTATTATATGCTTGCACATAAGGGAGAGTTCTATAACTATTCAGGATGCGGTAACACATTCAATTGCAACCATCCTGTTGTGCGACAGTTTATAGTAGACTGCTTGAGATATTGGGTAACAGAGATGCATGTGGATGGGTTCCGCTTTGATCTTGCTTCTATTATGACGAGGGGTAGCAGTCTCTGGGATGCAACTAATGTATACGGGGTTCCAATAGAAGGTGACTTGTTGACAACTGGAACCCCTCTTGCTAACCCACCATTGGTTGACATGATAAGTAATGACCCAATACTTCGTGGAGTGAAGCTTATAGCTGAAGCATGGGATACAGGAGGCCTATACCAAGTTGGCATGTTTCCTCACTGGGGTATTTGGTCAGAATGGAATGGGAAGTATCGTGACACAGTGCGGCAGTTTATCAAGGGCACAGATGGCTTTTCTGGCGCTTTGGCTGAATGTCTTTGTGGAAGCCCTAATTTATACCAGAAAGGGGGAAGGAGGCCATGGAATAGTATCAATTTCGTCTGCGCACACGATGGTTTTACTTTAGCTGATTTAGTTACCTATAACAACAAACATAACCTGGCAAATGGAGAAGACAACAATGATGGAGAGAGTCATAATAATAGCTGGAACTGTGGACAGGAGGGAGAGTTCGCACGCATTTCAGTGAAGAAATTGAGGAAACGACAAATGCGGAATTTTTTTGTGTGCCTCATGGTTTCCCAAGGTGTTCCAATGATATATATGGGTGATGAATATGGTCATACAAAAGGAGGAAACAACAACACATATTGCCATGATAATTATATTAATTACTTTCGGTGGGATAAGAAGGAAGAGTCCTCATTGGACTTTTTCAGATTTTGCTGCCTTATGACCAAATTCCGCCAGGAATGCGAGTCACTGGGCTTAAATGACTTCCCAACAGCAGAGAGGCTGCAGTGGCATGGTCATGCTCCTGGGGTACCAGACTGGTCTGAAACAAGCCGCTTTGTTGCCTTTACTCTGATGGACTCAGTGAAGAGAGAGCTGTATATTGCTTTCAATGCCAGCCATTTACCCGCAACCATTACACTGCCAGAGAGGCCTGGATACAGATGGGATCCCTTGGTAGACACCAGCAAGCCTGCTCCATTTGACTTTCTTTCTAGTGACCTCCCAGGAAGAGATATTGCAGTTAAACAGTACGCTCACTTTCTTGATGCCAATTTATATCCTATGCTAAGTTATTCTTCAATCATCCTATTTCTCTCTCCCGTCGATCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0004133 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005977 GO:0005982 GO:0005983 GO:0006073 GO:0006091 GO:0006112 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009251 GO:0009507 GO:0009536 GO:0009987 GO:0010021 GO:0010368 GO:0015980 GO:0016052 GO:0016787 GO:0016798 GO:0019156 GO:0032991 GO:0043033 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:1901135 GO:1901137 GO:1901575 GO:1901576 GO:1902494 GO:2000896

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 map00500 map01100 map01110

Pfam Domains

Protein Families

Alpha-amylase CBM_48

Protein Analysis

806

Amino Acids

91.31

Weight (kDa)

5.94

Isoelectric Point (pI)

35.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003151)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39930 AT2G39930 AT2G39930
fragaria_vesca	FvH4_4g06440 FvH4_4g06440 FvH4_4g06440 FvH4_4g06440 FvH4_4g06440 FvH4_4g06440 FvH4_4g06440 FvH4_4g06440
malus_domestica	MD13G1236000.v1.1 MD16G1240700.v1.1 MD16G1240800.v1.1 MD16G1241000.v1.1
prunus_persica	Prupe.1G067700_v2.0.a1 Prupe.1G067700_v2.0.a1
pyrus_communis	pycom13g20870 pycom13g20880 pycom13g21910 pycom16g20170
rosa_chinensis	RchiOBHm_Chr4g0398221 RchiOBHm_Chr5g0038481
rosa_laevigata	RLG00000009377
rosa_multiflora	Rmu_sc0013706.1_g000001 Rmu_sc0020611.1_g000004 Rmu_sc0032626.1_g000001 Rmu_ssc0000049.1_g000006
rosa_roxburghii	Rroxscaffold_5G00343210
rosa_rugosa	Rorug04G0007100 Rorug04G0007100
rosa_samantha	Rh4AG084200 Rh4BG081600 Rh4CG091500 Rh4CG091600 Rh4DG076700
rosa_wichuraiana	Rw4G007010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1675
Acc65I	GGTACC	2 cut(s)	652, 2113
AccB1I	GGYRCC	4 cut(s)	111, 299, 652, 2113
AccI	GTMKAC	4 cut(s)	243, 1242, 1347, 2262
AccII	CGCG	2 cut(s)	310, 312
AclWI	GGATC	7 cut(s)	419, 560, 573, 842, 2246, 2259, 2405
AcoI	YGGCCR	2 cut(s)	642, 997
AcsI	RAATTY	4 cut(s)	503, 922, 1846, 2030
AcuI	CTGAAG	4 cut(s)	488, 546, 1113, 1482
AcyI	GRCGYC	1 cut(s)	112
AfaI	GTAC	5 cut(s)	654, 787, 884, 2115, 2336
AfiI	CCNNNNNNNGG	7 cut(s)	108, 530, 799, 1364, 1408, 1511, 1636
AgsI	TTSAA	6 cut(s)	481, 871, 1081, 1207, 2194, 2385
AjnI	CCWGG	7 cut(s)	276, 781, 1728, 2037, 2107, 2236, 2308
AloI	GAACNNNNNNTCC	2 cut(s)	1784, 1816
Alw26I	GTCTC	3 cut(s)	167, 224, 1331
AlwI	GGATC	7 cut(s)	419, 560, 573, 842, 2246, 2259, 2405
AlwNI	CAGNNNCTG	2 cut(s)	218, 1329
AoxI	GGCC	7 cut(s)	248, 632, 642, 997, 1480, 1646, 2234
ApeKI	GCWGC	6 cut(s)	7, 10, 13, 33, 2016, 2086
ApoI	RAATTY	4 cut(s)	503, 922, 1846, 2030
AseI	ATTAAT	1 cut(s)	1959
Asp718I	GGTACC	2 cut(s)	652, 2113
AspLEI	GCGC	5 cut(s)	114, 312, 1133, 1592, 1676
AspS9I	GGNCC	2 cut(s)	42, 1109
AsuHPI	GGTGA	7 cut(s)	65, 202, 920, 948, 1072, 1379, 1910
AsuII	TTCGAA	1 cut(s)	507
AvaII	GGWCC	2 cut(s)	42, 1109
BaeGI	GKGCMC	1 cut(s)	1574
BamHI	GGATCC	2 cut(s)	565, 2251
BanI	GGYRCC	4 cut(s)	111, 299, 652, 2113
BarI	GAAGNNNNNNTAC	2 cut(s)	675, 707
BbsI	GAAGAC	2 cut(s)	1069, 1749
BbvI	GCAGC	6 cut(s)	19, 22, 25, 45, 2003, 2073
BceAI	ACGGC	1 cut(s)	984
BciT130I	CCWGG	7 cut(s)	278, 783, 1730, 2039, 2109, 2238, 2310
BciVI	GTATCC	3 cut(s)	926, 1465, 2234
BclI	TGATCA	3 cut(s)	372, 814, 1062
BcoDI	GTCTC	3 cut(s)	167, 224, 1331
BfaI	CTAG	1 cut(s)	2298
BfmI	CTRYAG	1 cut(s)	2087
BfoI	RGCGCY	3 cut(s)	115, 1134, 1593
BfuI	GTATCC	3 cut(s)	926, 1465, 2234
BglI	GCCNNNNNGGC	1 cut(s)	2233
BglII	AGATCT	1 cut(s)	715
BisI	GCNGC	8 cut(s)	8, 11, 14, 34, 1556, 2017, 2087, 2137
BlsI	GCNGC	8 cut(s)	9, 12, 15, 35, 1557, 2018, 2088, 2138
BmcAI	AGTACT	1 cut(s)	884
Bme1390I	CCNGG	7 cut(s)	278, 783, 1730, 2039, 2109, 2238, 2310
Bme18I	GGWCC	2 cut(s)	42, 1109
BmgT120I	GGNCC	2 cut(s)	42, 1109
BmiI	GGNNCC	9 cut(s)	113, 301, 567, 654, 1286, 1356, 1387, 2115, 2253
BmrFI	CCNGG	7 cut(s)	278, 783, 1730, 2039, 2109, 2238, 2310
BmrI	ACTGGG	3 cut(s)	688, 1519, 2063
BmsI	GCATC	7 cut(s)	25, 144, 994, 1181, 1260, 1324, 2341
BmuI	ACTGGG	3 cut(s)	688, 1519, 2063
BoxI	GACNNNNGTC	1 cut(s)	236
BpiI	GAAGAC	2 cut(s)	1069, 1749
BpmI	CTGGAG	1 cut(s)	899
Bpu14I	TTCGAA	1 cut(s)	507
BpuEI	CTTGAG	1 cut(s)	1270
BsaAI	YACGTR	1 cut(s)	989
BsaBI	GATNNNNATC	1 cut(s)	973
BsaHI	GRCGYC	1 cut(s)	112
BsaJI	CCNNGG	8 cut(s)	276, 277, 793, 1649, 1873, 2108, 2256, 2308
BsaWI	WCCGGW	1 cut(s)	178
BsaXI	ACNNNNNCTCC	2 cut(s)	1784, 1814
Bsc4I	CCNNNNNNNGG	7 cut(s)	108, 530, 799, 1364, 1408, 1511, 1636
Bse118I	RCCGGY	1 cut(s)	644
Bse1I	ACTGG	6 cut(s)	448, 683, 1387, 1514, 2058, 2126
Bse3DI	GCAATG	2 cut(s)	90, 175
Bse8I	GATNNNNATC	1 cut(s)	973
BseBI	CCWGG	7 cut(s)	278, 783, 1730, 2039, 2109, 2238, 2310
BseDI	CCNNGG	8 cut(s)	276, 277, 793, 1649, 1873, 2108, 2256, 2308
BseGI	GGATG	8 cut(s)	159, 283, 1075, 1196, 1216, 1285, 1339, 2388
BseJI	GATNNNNATC	1 cut(s)	973
BseLI	CCNNNNNNNGG	7 cut(s)	108, 530, 799, 1364, 1408, 1511, 1636
BseMI	GCAATG	2 cut(s)	90, 175
BseMII	CTCAG	2 cut(s)	399, 2178
BseNI	ACTGG	6 cut(s)	448, 683, 1387, 1514, 2058, 2126
BseRI	GAGGAG	1 cut(s)	407
BseSI	GKGCMC	1 cut(s)	1574
BseXI	GCAGC	6 cut(s)	19, 22, 25, 45, 2003, 2073
BseYI	CCCAGC	1 cut(s)	287
Bsh1236I	CGCG	2 cut(s)	310, 312
Bsh1285I	CGRYCG	1 cut(s)	240
BshFI	GGCC	7 cut(s)	250, 634, 644, 999, 1482, 1648, 2236
BshNI	GGYRCC	4 cut(s)	111, 299, 652, 2113
BsiEI	CGRYCG	1 cut(s)	240
BsiSI	CCGG	2 cut(s)	179, 645
BslFI	GGGAC	3 cut(s)	229, 259, 546
BslI	CCNNNNNNNGG	7 cut(s)	108, 530, 799, 1364, 1408, 1511, 1636
BsmAI	GTCTC	3 cut(s)	167, 224, 1331
BsmFI	GGGAC	3 cut(s)	229, 259, 546
BsmI	GAATGC	1 cut(s)	2048
BsnI	GGCC	7 cut(s)	250, 634, 644, 999, 1482, 1648, 2236
Bsp119I	TTCGAA	1 cut(s)	507
Bsp1286I	GDGCHC	1 cut(s)	1574
Bsp19I	CCATGG	1 cut(s)	1649
BspANI	GGCC	7 cut(s)	250, 634, 644, 999, 1482, 1648, 2236
BspCNI	CTCAG	2 cut(s)	400, 2177
BspFNI	CGCG	2 cut(s)	310, 312
BspHI	TCATGA	1 cut(s)	862
BspLI	GGNNCC	9 cut(s)	113, 301, 567, 654, 1286, 1356, 1387, 2115, 2253
BspMAI	CTGCAG	1 cut(s)	2091
BspPI	GGATC	7 cut(s)	419, 560, 573, 842, 2246, 2259, 2405
BspT104I	TTCGAA	1 cut(s)	507
BspT107I	GGYRCC	4 cut(s)	111, 299, 652, 2113
BsrDI	GCAATG	2 cut(s)	90, 175
BsrFI	RCCGGY	1 cut(s)	644
BsrI	ACTGG	6 cut(s)	448, 683, 1387, 1514, 2058, 2126
BssAI	RCCGGY	1 cut(s)	644
BssECI	CCNNGG	8 cut(s)	276, 277, 793, 1649, 1873, 2108, 2256, 2308
BssNAI	GTATAC	1 cut(s)	1348
BssNI	GRCGYC	1 cut(s)	112
BssT1I	CCWWGG	4 cut(s)	793, 1649, 1873, 2256
Bst1107I	GTATAC	1 cut(s)	1348
Bst2UI	CCWGG	7 cut(s)	278, 783, 1730, 2039, 2109, 2238, 2310
Bst4CI	ACNGT	7 cut(s)	652, 842, 943, 1233, 1552, 1784, 2334
Bst6I	CTCTTC	6 cut(s)	131, 522, 553, 1980, 2165, 2308
BstACI	GRCGYC	1 cut(s)	112
BstBAI	YACGTR	1 cut(s)	989
BstBI	TTCGAA	1 cut(s)	507
BstC8I	GCNNGC	8 cut(s)	632, 646, 982, 1158, 1807, 2200, 2273, 2277
BstDEI	CTNAG	6 cut(s)	408, 552, 611, 2164, 2372, 2415
BstDSI	CCRYGG	1 cut(s)	1649
BstF5I	GGATG	8 cut(s)	159, 283, 1075, 1196, 1216, 1285, 1339, 2388
BstFNI	CGCG	2 cut(s)	310, 312
BstH2I	RGCGCY	3 cut(s)	115, 1134, 1593
BstHHI	GCGC	5 cut(s)	114, 312, 1133, 1592, 1676
BstMAI	GTCTC	3 cut(s)	167, 224, 1331
BstMCI	CGRYCG	1 cut(s)	240
BstMWI	GCNNNNNNNGC	9 cut(s)	13, 19, 256, 1578, 1587, 2043, 2092, 2195, 2233
BstNI	CCWGG	7 cut(s)	278, 783, 1730, 2039, 2109, 2238, 2310
BstNSI	RCATGY	3 cut(s)	461, 1277, 1501
BstPAI	GACNNNNGTC	1 cut(s)	236
BstSCI	CCNGG	7 cut(s)	276, 781, 1728, 2037, 2107, 2236, 2308
BstSFI	CTRYAG	1 cut(s)	2087
BstSLI	GKGCMC	1 cut(s)	1574
BstSNI	TACGTA	1 cut(s)	989
BstUI	CGCG	2 cut(s)	310, 312
BstV1I	GCAGC	6 cut(s)	19, 22, 25, 45, 2003, 2073
BstV2I	GAAGAC	2 cut(s)	1069, 1749
BstX2I	RGATCY	3 cut(s)	565, 715, 2251
BstYI	RGATCY	3 cut(s)	565, 715, 2251
BstZ17I	GTATAC	1 cut(s)	1348
BsuI	GTATCC	3 cut(s)	926, 1465, 2234
BsuRI	GGCC	7 cut(s)	250, 634, 644, 999, 1482, 1648, 2236
BtgI	CCRYGG	1 cut(s)	1649
BtgZI	GCGATG	1 cut(s)	327
BtsCI	GGATG	8 cut(s)	159, 283, 1075, 1196, 1216, 1285, 1339, 2388
BtsI	GCAGTG	3 cut(s)	45, 2096, 2222
BtsIMutI	CAGTG	8 cut(s)	45, 1507, 1557, 1821, 2051, 2096, 2172, 2222
Cac8I	GCNNGC	8 cut(s)	632, 646, 982, 1158, 1807, 2200, 2273, 2277
CaiI	CAGNNNCTG	2 cut(s)	218, 1329
CciI	TCATGA	1 cut(s)	862
CfoI	GCGC	5 cut(s)	114, 312, 1133, 1592, 1676
Cfr10I	RCCGGY	1 cut(s)	644
Cfr13I	GGNCC	2 cut(s)	42, 1109
CseI	GACGC	1 cut(s)	248
Csp6I	GTAC	5 cut(s)	653, 786, 883, 2114, 2335
CviQI	GTAC	5 cut(s)	653, 786, 883, 2114, 2335
DdeI	CTNAG	6 cut(s)	408, 552, 611, 2164, 2372, 2415
DinI	GGCGCC	1 cut(s)	113
EaeI	YGGCCR	2 cut(s)	642, 997
Eam1104I	CTCTTC	6 cut(s)	131, 522, 553, 1980, 2165, 2308
EarI	CTCTTC	6 cut(s)	131, 522, 553, 1980, 2165, 2308
EciI	GGCGGA	3 cut(s)	166, 331, 2024
Eco105I	TACGTA	1 cut(s)	989
Eco130I	CCWWGG	4 cut(s)	793, 1649, 1873, 2256
Eco147I	AGGCCT	2 cut(s)	1482, 2236
Eco47I	GGWCC	2 cut(s)	42, 1109
Eco57I	CTGAAG	4 cut(s)	488, 546, 1113, 1482
EcoRII	CCWGG	7 cut(s)	276, 781, 1728, 2037, 2107, 2236, 2308
EcoT14I	CCWWGG	4 cut(s)	793, 1649, 1873, 2256
EcoT22I	ATGCAT	1 cut(s)	1275
EgeI	GGCGCC	1 cut(s)	113
EheI	GGCGCC	1 cut(s)	113
ErhI	CCWWGG	4 cut(s)	793, 1649, 1873, 2256
FalI	AAGNNNNNCTT	6 cut(s)	474, 506, 519, 551, 2365, 2397
FaqI	GGGAC	3 cut(s)	229, 259, 546
FauI	CCCGC	1 cut(s)	2218
FbaI	TGATCA	3 cut(s)	372, 814, 1062
FblI	GTMKAC	4 cut(s)	243, 1242, 1347, 2262
Fnu4HI	GCNGC	8 cut(s)	8, 11, 14, 34, 1556, 2017, 2087, 2137
FokI	GGATG	8 cut(s)	166, 270, 1082, 1203, 1203, 1292, 1346, 2375
Fsp4HI	GCNGC	8 cut(s)	8, 11, 14, 34, 1556, 2017, 2087, 2137
FspBI	CTAG	1 cut(s)	2298
FspI	TGCGCA	1 cut(s)	1675
GlaI	GCGC	5 cut(s)	113, 311, 1132, 1591, 1675
GluI	GCNGC	8 cut(s)	8, 11, 14, 34, 1556, 2017, 2087, 2137
GsaI	CCCAGC	1 cut(s)	291
GsuI	CTGGAG	1 cut(s)	899
HaeII	RGCGCY	3 cut(s)	115, 1134, 1593
HaeIII	GGCC	7 cut(s)	250, 634, 644, 999, 1482, 1648, 2236
HapII	CCGG	2 cut(s)	179, 645
HgaI	GACGC	1 cut(s)	248
HhaI	GCGC	5 cut(s)	114, 312, 1133, 1592, 1676
Hin1I	GRCGYC	1 cut(s)	112
Hin6I	GCGC	5 cut(s)	112, 310, 1131, 1590, 1674
HinP1I	GCGC	5 cut(s)	112, 310, 1131, 1590, 1674
HincII	GTYRAC	4 cut(s)	244, 325, 1377, 1414
HindII	GTYRAC	4 cut(s)	244, 325, 1377, 1414
HindIII	AAGCTT	2 cut(s)	809, 1451
HinfI	GANTC	9 cut(s)	124, 139, 175, 545, 761, 1762, 1988, 2048, 2162
HpaI	GTTAAC	1 cut(s)	325
HpaII	CCGG	2 cut(s)	179, 645
HphI	GGTGA	7 cut(s)	65, 202, 920, 948, 1072, 1379, 1910
Hpy188I	TCNGA	8 cut(s)	129, 144, 385, 468, 1525, 2009, 2128, 2157
Hpy188III	TCNNGA	7 cut(s)	422, 524, 617, 863, 1188, 1544, 2348
Hpy99I	CGWCG	3 cut(s)	245, 264, 2411
HpyCH4III	ACNGT	7 cut(s)	652, 842, 943, 1233, 1552, 1784, 2334
HpyCH4IV	ACGT	2 cut(s)	988, 1048
HpyCH4V	TGCA	9 cut(s)	33, 575, 1007, 1160, 1212, 1273, 1337, 2089, 2324
HpyF10VI	GCNNNNNNNGC	9 cut(s)	13, 19, 256, 1578, 1587, 2043, 2092, 2195, 2233
HpyF3I	CTNAG	6 cut(s)	408, 552, 611, 2164, 2372, 2415
HpySE526I	ACGT	2 cut(s)	988, 1048
Hsp92I	GRCGYC	1 cut(s)	112
HspAI	GCGC	5 cut(s)	112, 310, 1131, 1590, 1674
KasI	GGCGCC	1 cut(s)	111
KpnI	GGTACC	2 cut(s)	656, 2117
KroI	GCCGGC	1 cut(s)	644
KroNI	GCCGGC	1 cut(s)	646
Ksp22I	TGATCA	3 cut(s)	372, 814, 1062
KspAI	GTTAAC	1 cut(s)	325
LmnI	GCTCC	6 cut(s)	4, 55, 63, 826, 2110, 2284
Lsp1109I	GCAGC	6 cut(s)	19, 22, 25, 45, 2003, 2073
LweI	GCATC	7 cut(s)	25, 144, 994, 1181, 1260, 1324, 2341
MaeI	CTAG	1 cut(s)	2298
MaeII	ACGT	2 cut(s)	988, 1048
MfeI	CAATTG	1 cut(s)	1207
MflI	RGATCY	3 cut(s)	565, 715, 2251
MhlI	GDGCHC	1 cut(s)	1574
Mly113I	GGCGCC	1 cut(s)	112
MlyI	GAGTC	8 cut(s)	148, 169, 539, 770, 1771, 1997, 2057, 2156
MmeI	TCCRAC	1 cut(s)	543
Mph1103I	ATGCAT	1 cut(s)	1275
MroNI	GCCGGC	1 cut(s)	644
MseI	TTAA	7 cut(s)	324, 821, 851, 1032, 1959, 2060, 2328
MslI	CAYNNNNRTG	4 cut(s)	1047, 1278, 1814, 2100
MspA1I	CMGCKG	2 cut(s)	697, 1091
MspI	CCGG	2 cut(s)	179, 645
MspR9I	CCNGG	7 cut(s)	278, 783, 1730, 2039, 2109, 2238, 2310
MunI	CAATTG	1 cut(s)	1207
Mva1269I	GAATGC	1 cut(s)	2048
MvaI	CCWGG	7 cut(s)	278, 783, 1730, 2039, 2109, 2238, 2310
MvnI	CGCG	2 cut(s)	310, 312
MwoI	GCNNNNNNNGC	9 cut(s)	13, 19, 256, 1578, 1587, 2043, 2092, 2195, 2233
NaeI	GCCGGC	1 cut(s)	646
NarI	GGCGCC	1 cut(s)	112
NcoI	CCATGG	1 cut(s)	1649
NgoMIV	GCCGGC	1 cut(s)	644
NlaIV	GGNNCC	9 cut(s)	113, 301, 567, 654, 1286, 1356, 1387, 2115, 2253
NmuCI	GTSAC	5 cut(s)	908, 1367, 1544, 2049, 2300
NsbI	TGCGCA	1 cut(s)	1675
NsiI	ATGCAT	1 cut(s)	1275
NspI	RCATGY	3 cut(s)	461, 1277, 1501
NspV	TTCGAA	1 cut(s)	507
PagI	TCATGA	1 cut(s)	862
PasI	CCCWGGG	1 cut(s)	277
PceI	AGGCCT	2 cut(s)	1482, 2236
PctI	GAATGC	1 cut(s)	2048
PdiI	GCCGGC	1 cut(s)	646
PfeI	GAWTC	1 cut(s)	124
PkrI	GCNGC	8 cut(s)	9, 12, 15, 35, 1557, 2018, 2088, 2138
PleI	GAGTC	8 cut(s)	147, 169, 539, 769, 1770, 1996, 2056, 2156
PluTI	GGCGCC	1 cut(s)	115
PpsI	GAGTC	8 cut(s)	147, 169, 539, 769, 1770, 1996, 2056, 2156
Ppu21I	YACGTR	1 cut(s)	989
PshAI	GACNNNNGTC	1 cut(s)	236
PshBI	ATTAAT	1 cut(s)	1959
Psp6I	CCWGG	7 cut(s)	276, 781, 1728, 2037, 2107, 2236, 2308
PspFI	CCCAGC	1 cut(s)	287
PspGI	CCWGG	7 cut(s)	276, 781, 1728, 2037, 2107, 2236, 2308
PspN4I	GGNNCC	9 cut(s)	113, 301, 567, 654, 1286, 1356, 1387, 2115, 2253
PspPI	GGNCC	2 cut(s)	42, 1109
PsrI	GAACNNNNNNTAC	2 cut(s)	1338, 1370
PstI	CTGCAG	1 cut(s)	2091
PstNI	CAGNNNCTG	2 cut(s)	218, 1329
PsuI	RGATCY	3 cut(s)	565, 715, 2251
PvuII	CAGCTG	1 cut(s)	1091
RsaI	GTAC	5 cut(s)	654, 787, 884, 2115, 2336
RsaNI	GTAC	5 cut(s)	653, 786, 883, 2114, 2335
RseI	CAYNNNNRTG	4 cut(s)	1047, 1278, 1814, 2100
SalI	GTCGAC	1 cut(s)	242
SaqAI	TTAA	7 cut(s)	324, 821, 851, 1032, 1959, 2060, 2328
SatI	GCNGC	8 cut(s)	8, 11, 14, 34, 1556, 2017, 2087, 2137
Sau96I	GGNCC	2 cut(s)	42, 1109
ScaI	AGTACT	1 cut(s)	884
SchI	GAGTC	8 cut(s)	148, 169, 539, 770, 1771, 1997, 2057, 2156
ScrFI	CCNGG	7 cut(s)	278, 783, 1730, 2039, 2109, 2238, 2310
SduI	GDGCHC	1 cut(s)	1574
SfaNI	GCATC	7 cut(s)	25, 144, 994, 1181, 1260, 1324, 2341
SfcI	CTRYAG	1 cut(s)	2087
SfoI	GGCGCC	1 cut(s)	113
SfuI	TTCGAA	1 cut(s)	507
SinI	GGWCC	2 cut(s)	42, 1109
SmiMI	CAYNNNNRTG	4 cut(s)	1047, 1278, 1814, 2100
SmlI	CTYRAG	1 cut(s)	1249
SmoI	CTYRAG	1 cut(s)	1249
SnaBI	TACGTA	1 cut(s)	989
SseBI	AGGCCT	2 cut(s)	1482, 2236
SspDI	GGCGCC	1 cut(s)	111
SspMI	CTAG	1 cut(s)	2298
StuI	AGGCCT	2 cut(s)	1482, 2236
StyD4I	CCNGG	7 cut(s)	276, 781, 1728, 2037, 2107, 2236, 2308
StyI	CCWWGG	4 cut(s)	793, 1649, 1873, 2256
TaaI	ACNGT	7 cut(s)	652, 842, 943, 1233, 1552, 1784, 2334
TaiI	ACGT	2 cut(s)	991, 1051
TaqI	TCGA	4 cut(s)	122, 243, 507, 2409
TatI	WGTACW	1 cut(s)	882
TauI	GCSGC	2 cut(s)	1558, 2139
TfiI	GAWTC	1 cut(s)	124
Tru1I	TTAA	7 cut(s)	324, 821, 851, 1032, 1959, 2060, 2328
Tru9I	TTAA	7 cut(s)	324, 821, 851, 1032, 1959, 2060, 2328
TscAI	CASTG	8 cut(s)	52, 1514, 1557, 1821, 2058, 2096, 2172, 2229
TseFI	GTSAC	5 cut(s)	908, 1367, 1544, 2049, 2300
TseI	GCWGC	6 cut(s)	7, 10, 13, 33, 2016, 2086
Tsp45I	GTSAC	5 cut(s)	908, 1367, 1544, 2049, 2300
TspDTI	ATGAA	5 cut(s)	744, 963, 1029, 1116, 1917
TspGWI	ACGGA	1 cut(s)	510
TspRI	CASTG	8 cut(s)	52, 1514, 1557, 1821, 2058, 2096, 2172, 2229
VpaK11BI	GGWCC	2 cut(s)	42, 1109
VspI	ATTAAT	1 cut(s)	1959
XapI	RAATTY	4 cut(s)	503, 922, 1846, 2030
XceI	RCATGY	3 cut(s)	461, 1277, 1501
XmiI	GTMKAC	4 cut(s)	243, 1242, 1347, 2262
XspI	CTAG	1 cut(s)	2298
ZrmI	AGTACT	1 cut(s)	884
Zsp2I	ATGCAT	1 cut(s)	1275

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.