Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0020611.1

Orthogroup ID

OG0003151

Physical Location & Seq

Genomic Coordinates Reverse (-)

13366 .. 18697

Gene Structure 5332 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0020611.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1503 bp

atggagcacctaaccacttggtccagtgctcccagactccactctcaccaccaccgcctctttgcttccaatgcaaggctccggagccgaagccccaaccgtctcaattggcgaatgctagggcttcggaggggcggtgctccgtcggcggtgaaggcaagcgacggaggcgcggcggtggatacagcggtggccgagaggccgaaactgcgtcgttttcaggtctccgaaggtcatccgactccctttggcgccacgctccgcgacggtggggttaacttcgctgtctacgccggcaatgccgataaagttactgagctgatccctcttgatcctgtgaacaataagagtggtaatgtgtggcatgtatttctaactggagatctcaaagatatcctgtatggatacaaattcgacggcaagtattctccgcaagagggacactactatgattcgtcaaagattgtattggatccttatgcaaaggcagttatacgcagaggtgaatttgggagtctaggtcctgatggtaattgctggcctcaaatggcctgcacggtaccttcttttgatgataagttcaactgggaaggagatttacctctgaagtatccacaaaaagatcttatcatatatgaaatgcatgtgcgaggttttacaaggcatgaatcgagcatgactgaattgcctggtacatactgtggtttggtggagaagcttgatcacttaaaggaacttgggatcaactgtatagagttaatgccatgtcatgagttcaatgaactggagtactttggctacaattctgtcttgggtgactacaaggtaaatttttggggatattcaactgtcagttacttttcaccaatgataagatattcatccgctggcacacgtaattgtggccgtgatgcaataaatgaagtcaagtttcttgttaaagaagcacatagacgtggaattgaggtgatcatggatgttgttttcaatcacacagctgaaggaaatgaaaatggtcccattttgtcttttagaggtgctgacaacagtgtctattacatgctcgcccctaagggagagttttataattattcagggtgtggtaacacattcaattgcaaccatcctgttgtgcgacaattcatagtagattgcttgagatattgggtaacagagatgcacgtggatgggttccgctttgatcttgcttctattatgaccaggggtaccagtctctgggattcaactaatgtatacgggagtctgatagaaggtgacttgttgacaactggaacccctcttgctagccctccattgattgacatgattagtaatgacccaatacttcatggagtgaagctgatagctgaagcttgggatgcaggaggcctgtaccaacttggcatgtttcctcactggggtatttggtcagaatggaacgggaaggtctgttcatacgtttcacttttatactcaccatctcaattaatcaatttaaaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0004133 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005977 GO:0005982 GO:0005983 GO:0006073 GO:0006091 GO:0006112 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009251 GO:0009507 GO:0009536 GO:0009987 GO:0010021 GO:0010368 GO:0015980 GO:0016052 GO:0016787 GO:0016798 GO:0019156 GO:0032991 GO:0043033 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:1901135 GO:1901137 GO:1901575 GO:1901576 GO:1902494 GO:2000896

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 map00500 map01100 map01110

Pfam Domains

Protein Families

Alpha-amylase CBM_48

Protein Analysis

500

Amino Acids

56.21

Weight (kDa)

6.31

Isoelectric Point (pI)

37.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003151)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39930 AT2G39930 AT2G39930
fragaria_vesca	FvH4_4g06440 FvH4_4g06440 FvH4_4g06440 FvH4_4g06440 FvH4_4g06440 FvH4_4g06440 FvH4_4g06440 FvH4_4g06440
malus_domestica	MD13G1236000.v1.1 MD16G1240700.v1.1 MD16G1240800.v1.1 MD16G1241000.v1.1
prunus_persica	Prupe.1G067700_v2.0.a1 Prupe.1G067700_v2.0.a1
pyrus_communis	pycom13g20870 pycom13g20880 pycom13g21910 pycom16g20170
rosa_chinensis	RchiOBHm_Chr4g0398221 RchiOBHm_Chr5g0038481
rosa_laevigata	RLG00000009377
rosa_multiflora	Rmu_sc0013706.1_g000001 Rmu_sc0020611.1_g000004 Rmu_sc0032626.1_g000001 Rmu_ssc0000049.1_g000006
rosa_roxburghii	Rroxscaffold_5G00343210
rosa_rugosa	Rorug04G0007100 Rorug04G0007100
rosa_samantha	Rh4AG084200 Rh4BG081600 Rh4CG091500 Rh4CG091600 Rh4DG076700
rosa_wichuraiana	Rw4G007010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1086
AasI	GACNNNNNNGTC	1 cut(s)	1049
Acc65I	GGTACC	2 cut(s)	559, 1226
AccB1I	GGYRCC	3 cut(s)	251, 559, 1226
AccB7I	CCANNNNNTGG	1 cut(s)	1236
AccI	GTMKAC	2 cut(s)	288, 1254
AccII	CGCG	2 cut(s)	173, 264
AccIII	TCCGGA	1 cut(s)	81
AclWI	GGATC	5 cut(s)	316, 326, 467, 480, 749
AcoI	YGGCCR	2 cut(s)	192, 904
AcsI	RAATTY	3 cut(s)	410, 506, 829
AcuI	CTGAAG	3 cut(s)	626, 1020, 1389
AcvI	CACGTG	1 cut(s)	1183
AcyI	GRCGYC	1 cut(s)	252
AfaI	GTAC	5 cut(s)	561, 694, 791, 1228, 1394
AfiI	CCNNNNNNNGG	4 cut(s)	75, 437, 1236, 1418
AflIII	ACRYGT	1 cut(s)	893
AgsI	TTSAA	6 cut(s)	583, 778, 846, 988, 1114, 1245
AjiI	CACGTC	1 cut(s)	956
AjnI	CCWGG	2 cut(s)	688, 1220
AloI	GAACNNNNNNTCC	2 cut(s)	1435, 1467
AluBI	AGCT	6 cut(s)	319, 718, 998, 1360, 1367, 1373
AluI	AGCT	6 cut(s)	319, 718, 998, 1360, 1367, 1373
Alw21I	GWGCWC	3 cut(s)	9, 31, 142
Alw26I	GTCTC	3 cut(s)	107, 229, 1238
AlwI	GGATC	5 cut(s)	316, 326, 467, 480, 749
AlwNI	CAGNNNCTG	1 cut(s)	1236
Aor13HI	TCCGGA	1 cut(s)	81
AoxI	GGCC	6 cut(s)	192, 200, 539, 549, 904, 1387
ApoI	RAATTY	3 cut(s)	410, 506, 829
AseI	ATTAAT	1 cut(s)	1487
Asp718I	GGTACC	2 cut(s)	559, 1226
AspLEI	GCGC	2 cut(s)	173, 254
AspS9I	GGNCC	3 cut(s)	21, 521, 1016
AsuHPI	GGTGA	8 cut(s)	38, 163, 515, 827, 855, 979, 1286, 1467
AsuNHI	GCTAGC	1 cut(s)	1304
AvaII	GGWCC	3 cut(s)	21, 521, 1016
AxyI	CCTNAGG	1 cut(s)	1071
BaeI	ACNNNNGTAYC	2 cut(s)	174, 207
BamHI	GGATCC	1 cut(s)	472
BanI	GGYRCC	3 cut(s)	251, 559, 1226
BarI	GAAGNNNNNNTAC	2 cut(s)	582, 614
BbrPI	CACGTG	1 cut(s)	1183
Bbv12I	GWGCWC	3 cut(s)	9, 31, 142
BccI	CCATC	4 cut(s)	521, 1131, 1181, 1486
BceAI	ACGGC	2 cut(s)	433, 891
BciT130I	CCWGG	2 cut(s)	690, 1222
BciVI	GTATCC	3 cut(s)	175, 398, 621
BclI	TGATCA	2 cut(s)	721, 969
BcoDI	GTCTC	3 cut(s)	107, 229, 1238
BfaI	CTAG	3 cut(s)	119, 518, 1305
BfoI	RGCGCY	1 cut(s)	255
BfuI	GTATCC	3 cut(s)	175, 398, 621
BglII	AGATCT	2 cut(s)	382, 622
BisI	GCNGC	1 cut(s)	174
BlsI	GCNGC	1 cut(s)	175
BmcAI	AGTACT	1 cut(s)	791
Bme1390I	CCNGG	2 cut(s)	690, 1222
Bme18I	GGWCC	3 cut(s)	21, 521, 1016
BmgBI	CACGTC	1 cut(s)	956
BmgT120I	GGNCC	3 cut(s)	21, 521, 1016
BmiI	GGNNCC	9 cut(s)	80, 86, 253, 474, 561, 1018, 1193, 1228, 1294
BmrFI	CCNGG	2 cut(s)	690, 1222
BmrI	ACTGGG	2 cut(s)	595, 1426
BmsI	GCATC	3 cut(s)	901, 1167, 1369
BmtI	GCTAGC	1 cut(s)	1308
BmuI	ACTGGG	2 cut(s)	595, 1426
BpmI	CTGGAG	2 cut(s)	399, 806
BpuEI	CTTGAG	1 cut(s)	1177
BsaAI	YACGTR	2 cut(s)	896, 1183
BsaBI	GATNNNNATC	1 cut(s)	880
BsaHI	GRCGYC	1 cut(s)	252
BsaI	GGTCTC	1 cut(s)	229
BsaJI	CCNNGG	1 cut(s)	1221
BsaWI	WCCGGW	1 cut(s)	81
BsaXI	ACNNNNNCTCC	4 cut(s)	121, 151, 505, 535
Bsc4I	CCNNNNNNNGG	4 cut(s)	75, 437, 1236, 1418
Bse118I	RCCGGY	1 cut(s)	293
Bse1I	ACTGG	7 cut(s)	24, 382, 590, 789, 1230, 1294, 1421
Bse21I	CCTNAGG	1 cut(s)	1071
Bse3DI	GCAATG	1 cut(s)	304
Bse8I	GATNNNNATC	1 cut(s)	880
BseAI	TCCGGA	1 cut(s)	81
BseBI	CCWGG	2 cut(s)	690, 1222
BseDI	CCNNGG	1 cut(s)	1221
BseGI	GGATG	6 cut(s)	235, 881, 982, 1123, 1192, 1384
BseJI	GATNNNNATC	1 cut(s)	880
BseLI	CCNNNNNNNGG	4 cut(s)	75, 437, 1236, 1418
BseMI	GCAATG	1 cut(s)	304
BseMII	CTCAG	1 cut(s)	306
BseNI	ACTGG	7 cut(s)	24, 382, 590, 789, 1230, 1294, 1421
BsgI	GTGCAG	1 cut(s)	538
Bsh1236I	CGCG	2 cut(s)	173, 264
BshFI	GGCC	6 cut(s)	194, 202, 541, 551, 906, 1389
BshNI	GGYRCC	3 cut(s)	251, 559, 1226
BsiHKAI	GWGCWC	3 cut(s)	9, 31, 142
BsiSI	CCGG	2 cut(s)	82, 294
BslFI	GGGAC	2 cut(s)	453, 1002
BslI	CCNNNNNNNGG	4 cut(s)	75, 437, 1236, 1418
BsmAI	GTCTC	3 cut(s)	107, 229, 1238
BsmBI	CGTCTC	1 cut(s)	107
BsmFI	GGGAC	2 cut(s)	453, 1002
BsmI	GAATGC	1 cut(s)	120
BsnI	GGCC	6 cut(s)	194, 202, 541, 551, 906, 1389
Bso31I	GGTCTC	1 cut(s)	229
Bsp1286I	GDGCHC	3 cut(s)	9, 31, 142
Bsp13I	TCCGGA	1 cut(s)	81
Bsp143I	GATC	9 cut(s)	321, 331, 382, 472, 622, 721, 741, 969, 1201
BspANI	GGCC	6 cut(s)	194, 202, 541, 551, 906, 1389
BspCNI	CTCAG	1 cut(s)	307
BspEI	TCCGGA	1 cut(s)	81
BspFNI	CGCG	2 cut(s)	173, 264
BspHI	TCATGA	1 cut(s)	769
BspLI	GGNNCC	9 cut(s)	80, 86, 253, 474, 561, 1018, 1193, 1228, 1294
BspOI	GCTAGC	1 cut(s)	1308
BspPI	GGATC	5 cut(s)	316, 326, 467, 480, 749
BspT107I	GGYRCC	3 cut(s)	251, 559, 1226
BspTNI	GGTCTC	1 cut(s)	229
BsrDI	GCAATG	1 cut(s)	304
BsrFI	RCCGGY	1 cut(s)	293
BsrI	ACTGG	7 cut(s)	24, 382, 590, 789, 1230, 1294, 1421
BssAI	RCCGGY	1 cut(s)	293
BssECI	CCNNGG	1 cut(s)	1221
BssMI	GATC	9 cut(s)	321, 331, 382, 472, 622, 721, 741, 969, 1201
BssNAI	GTATAC	1 cut(s)	1255
BssNI	GRCGYC	1 cut(s)	252
Bst1107I	GTATAC	1 cut(s)	1255
Bst2UI	CCWGG	2 cut(s)	690, 1222
Bst4CI	ACNGT	7 cut(s)	101, 269, 559, 701, 749, 850, 1049
BstACI	GRCGYC	1 cut(s)	252
BstBAI	YACGTR	2 cut(s)	896, 1183
BstC8I	GCNNGC	7 cut(s)	160, 295, 539, 553, 889, 1065, 1306
BstDEI	CTNAG	2 cut(s)	315, 1071
BstF5I	GGATG	6 cut(s)	235, 881, 982, 1123, 1192, 1384
BstFNI	CGCG	2 cut(s)	173, 264
BstH2I	RGCGCY	1 cut(s)	255
BstHHI	GCGC	2 cut(s)	173, 254
BstKTI	GATC	9 cut(s)	324, 334, 385, 475, 625, 724, 744, 972, 1204
BstMAI	GTCTC	3 cut(s)	107, 229, 1238
BstMBI	GATC	9 cut(s)	321, 331, 382, 472, 622, 721, 741, 969, 1201
BstMWI	GCNNNNNNNGC	8 cut(s)	71, 146, 155, 168, 208, 290, 299, 1379
BstNI	CCWGG	2 cut(s)	690, 1222
BstNSI	RCATGY	4 cut(s)	368, 647, 1063, 1408
BstSCI	CCNGG	2 cut(s)	688, 1220
BstUI	CGCG	2 cut(s)	173, 264
BstX2I	RGATCY	3 cut(s)	382, 472, 622
BstYI	RGATCY	3 cut(s)	382, 472, 622
BstZ17I	GTATAC	1 cut(s)	1255
Bsu36I	CCTNAGG	1 cut(s)	1071
BsuI	GTATCC	3 cut(s)	175, 398, 621
BsuRI	GGCC	6 cut(s)	194, 202, 541, 551, 906, 1389
BtrI	CACGTC	1 cut(s)	956
BtsCI	GGATG	6 cut(s)	235, 881, 982, 1123, 1192, 1384
BtsIMutI	CAGTG	3 cut(s)	31, 1054, 1414
Cac8I	GCNNGC	7 cut(s)	160, 295, 539, 553, 889, 1065, 1306
CaiI	CAGNNNCTG	1 cut(s)	1236
CciI	TCATGA	1 cut(s)	769
CfoI	GCGC	2 cut(s)	173, 254
Cfr10I	RCCGGY	1 cut(s)	293
Cfr13I	GGNCC	3 cut(s)	21, 521, 1016
CseI	GACGC	1 cut(s)	200
Csp6I	GTAC	5 cut(s)	560, 693, 790, 1227, 1393
CspCI	CAANNNNNGTGG	2 cut(s)	331, 366
CviQI	GTAC	5 cut(s)	560, 693, 790, 1227, 1393
DdeI	CTNAG	2 cut(s)	315, 1071
DinI	GGCGCC	1 cut(s)	253
DpnI	GATC	9 cut(s)	323, 333, 384, 474, 624, 723, 743, 971, 1203
DpnII	GATC	9 cut(s)	321, 331, 382, 472, 622, 721, 741, 969, 1201
DraI	TTTAAA	1 cut(s)	1497
DrdI	GACNNNNNNGTC	1 cut(s)	1049
DseDI	GACNNNNNNGTC	1 cut(s)	1049
EaeI	YGGCCR	2 cut(s)	192, 904
Eco147I	AGGCCT	1 cut(s)	1389
Eco31I	GGTCTC	1 cut(s)	229
Eco32I	GATATC	1 cut(s)	394
Eco47I	GGWCC	3 cut(s)	21, 521, 1016
Eco57I	CTGAAG	3 cut(s)	626, 1020, 1389
Eco72I	CACGTG	1 cut(s)	1183
Eco81I	CCTNAGG	1 cut(s)	1071
EcoO109I	RGGNCCY	1 cut(s)	521
EcoRII	CCWGG	2 cut(s)	688, 1220
EcoRV	GATATC	1 cut(s)	394
EcoT22I	ATGCAT	1 cut(s)	645
EgeI	GGCGCC	1 cut(s)	253
EheI	GGCGCC	1 cut(s)	253
Esp3I	CGTCTC	1 cut(s)	107
FaqI	GGGAC	2 cut(s)	453, 1002
FbaI	TGATCA	2 cut(s)	721, 969
FblI	GTMKAC	2 cut(s)	288, 1254
Fnu4HI	GCNGC	1 cut(s)	174
FokI	GGATG	6 cut(s)	222, 868, 989, 1110, 1199, 1391
Fsp4HI	GCNGC	1 cut(s)	174
FspBI	CTAG	3 cut(s)	119, 518, 1305
GlaI	GCGC	2 cut(s)	172, 253
GluI	GCNGC	1 cut(s)	174
GsuI	CTGGAG	2 cut(s)	399, 806
HaeII	RGCGCY	1 cut(s)	255
HaeIII	GGCC	6 cut(s)	194, 202, 541, 551, 906, 1389
HapII	CCGG	2 cut(s)	82, 294
HgaI	GACGC	1 cut(s)	200
HhaI	GCGC	2 cut(s)	173, 254
Hin1I	GRCGYC	1 cut(s)	252
Hin6I	GCGC	2 cut(s)	171, 252
HinP1I	GCGC	2 cut(s)	171, 252
HincII	GTYRAC	2 cut(s)	277, 1284
HindII	GTYRAC	2 cut(s)	277, 1284
HindIII	AAGCTT	2 cut(s)	716, 1371
HinfI	GANTC	7 cut(s)	36, 241, 452, 514, 668, 1241, 1261
HpaI	GTTAAC	1 cut(s)	277
HpaII	CCGG	2 cut(s)	82, 294
HphI	GGTGA	8 cut(s)	38, 163, 515, 827, 855, 979, 1286, 1467
Hpy166II	GTNNAC	5 cut(s)	277, 289, 340, 1255, 1284
Hpy188I	TCNGA	6 cut(s)	129, 229, 240, 606, 1266, 1432
Hpy188III	TCNNGA	4 cut(s)	82, 329, 524, 770
Hpy8I	GTNNAC	5 cut(s)	277, 289, 340, 1255, 1284
Hpy99I	CGWCG	5 cut(s)	148, 167, 216, 269, 419
HpyAV	CCTTC	7 cut(s)	148, 224, 573, 584, 995, 1265, 1438
HpyCH4III	ACNGT	7 cut(s)	101, 269, 559, 701, 749, 850, 1049
HpyCH4IV	ACGT	4 cut(s)	895, 955, 1182, 1458
HpyCH4V	TGCA	8 cut(s)	74, 482, 555, 643, 914, 1119, 1180, 1382
HpyF10VI	GCNNNNNNNGC	8 cut(s)	71, 146, 155, 168, 208, 290, 299, 1379
HpyF3I	CTNAG	2 cut(s)	315, 1071
HpySE526I	ACGT	4 cut(s)	895, 955, 1182, 1458
Hsp92I	GRCGYC	1 cut(s)	252
HspAI	GCGC	2 cut(s)	171, 252
KasI	GGCGCC	1 cut(s)	251
Kpn2I	TCCGGA	1 cut(s)	81
KpnI	GGTACC	2 cut(s)	563, 1230
KroI	GCCGGC	1 cut(s)	293
KroNI	GCCGGC	1 cut(s)	295
Ksp22I	TGATCA	2 cut(s)	721, 969
KspAI	GTTAAC	1 cut(s)	277
Kzo9I	GATC	9 cut(s)	321, 331, 382, 472, 622, 721, 741, 969, 1201
LmnI	GCTCC	6 cut(s)	4, 34, 84, 84, 145, 264
LweI	GCATC	3 cut(s)	901, 1167, 1369
MaeI	CTAG	3 cut(s)	119, 518, 1305
MaeII	ACGT	4 cut(s)	895, 955, 1182, 1458
MaeIII	GTNAC	6 cut(s)	310, 815, 854, 1103, 1168, 1274
MalI	GATC	9 cut(s)	323, 333, 384, 474, 624, 723, 743, 971, 1203
MboI	GATC	9 cut(s)	321, 331, 382, 472, 622, 721, 741, 969, 1201
MfeI	CAATTG	2 cut(s)	106, 1114
MflI	RGATCY	3 cut(s)	382, 472, 622
MhlI	GDGCHC	3 cut(s)	9, 31, 142
Mly113I	GGCGCC	1 cut(s)	252
MlyI	GAGTC	4 cut(s)	30, 235, 523, 1270
MmeI	TCCRAC	1 cut(s)	263
Mph1103I	ATGCAT	1 cut(s)	645
MroI	TCCGGA	1 cut(s)	81
MroNI	GCCGGC	1 cut(s)	293
MseI	TTAA	6 cut(s)	276, 728, 758, 939, 1487, 1496
MslI	CAYNNNNRTG	3 cut(s)	447, 954, 1185
MspA1I	CMGCKG	3 cut(s)	188, 887, 998
MspI	CCGG	2 cut(s)	82, 294
MspR9I	CCNGG	2 cut(s)	690, 1222
MunI	CAATTG	2 cut(s)	106, 1114
Mva1269I	GAATGC	1 cut(s)	120
MvaI	CCWGG	2 cut(s)	690, 1222
MvnI	CGCG	2 cut(s)	173, 264
MwoI	GCNNNNNNNGC	8 cut(s)	71, 146, 155, 168, 208, 290, 299, 1379
NaeI	GCCGGC	1 cut(s)	295
NarI	GGCGCC	1 cut(s)	252
NdeII	GATC	9 cut(s)	321, 331, 382, 472, 622, 721, 741, 969, 1201
NgoMIV	GCCGGC	1 cut(s)	293
NheI	GCTAGC	1 cut(s)	1304
NlaIV	GGNNCC	9 cut(s)	80, 86, 253, 474, 561, 1018, 1193, 1228, 1294
NmeAIII	GCCGAG	1 cut(s)	220
NmuCI	GTSAC	2 cut(s)	815, 1274
NsiI	ATGCAT	1 cut(s)	645
NspI	RCATGY	4 cut(s)	368, 647, 1063, 1408
PagI	TCATGA	1 cut(s)	769
PceI	AGGCCT	1 cut(s)	1389
PctI	GAATGC	1 cut(s)	120
PdiI	GCCGGC	1 cut(s)	295
PfeI	GAWTC	3 cut(s)	452, 668, 1241
PflMI	CCANNNNNTGG	1 cut(s)	1236
PkrI	GCNGC	1 cut(s)	175
PleI	GAGTC	4 cut(s)	30, 235, 522, 1269
PluTI	GGCGCC	1 cut(s)	255
PmaCI	CACGTG	1 cut(s)	1183
PmlI	CACGTG	1 cut(s)	1183
PpsI	GAGTC	4 cut(s)	30, 235, 522, 1269
Ppu21I	YACGTR	2 cut(s)	896, 1183
PpuMI	RGGWCCY	1 cut(s)	521
PshBI	ATTAAT	1 cut(s)	1487
PsiI	TTATAA	1 cut(s)	1086
Psp5II	RGGWCCY	1 cut(s)	521
Psp6I	CCWGG	2 cut(s)	688, 1220
PspCI	CACGTG	1 cut(s)	1183
PspGI	CCWGG	2 cut(s)	688, 1220
PspN4I	GGNNCC	9 cut(s)	80, 86, 253, 474, 561, 1018, 1193, 1228, 1294
PspPI	GGNCC	3 cut(s)	21, 521, 1016
PspPPI	RGGWCCY	1 cut(s)	521
PstNI	CAGNNNCTG	1 cut(s)	1236
PsuI	RGATCY	3 cut(s)	382, 472, 622
PvuII	CAGCTG	1 cut(s)	998
RsaI	GTAC	5 cut(s)	561, 694, 791, 1228, 1394
RsaNI	GTAC	5 cut(s)	560, 693, 790, 1227, 1393
RseI	CAYNNNNRTG	3 cut(s)	447, 954, 1185
SaqAI	TTAA	6 cut(s)	276, 728, 758, 939, 1487, 1496
SatI	GCNGC	1 cut(s)	174
Sau3AI	GATC	9 cut(s)	321, 331, 382, 472, 622, 721, 741, 969, 1201
Sau96I	GGNCC	3 cut(s)	21, 521, 1016
ScaI	AGTACT	1 cut(s)	791
SchI	GAGTC	4 cut(s)	30, 235, 523, 1270
ScrFI	CCNGG	2 cut(s)	690, 1222
SduI	GDGCHC	3 cut(s)	9, 31, 142
SfaNI	GCATC	3 cut(s)	901, 1167, 1369
SfoI	GGCGCC	1 cut(s)	253
SinI	GGWCC	3 cut(s)	21, 521, 1016
SmiMI	CAYNNNNRTG	3 cut(s)	447, 954, 1185
SmlI	CTYRAG	1 cut(s)	1156
SmoI	CTYRAG	1 cut(s)	1156
SseBI	AGGCCT	1 cut(s)	1389
SspDI	GGCGCC	1 cut(s)	251
SspMI	CTAG	3 cut(s)	119, 518, 1305
StuI	AGGCCT	1 cut(s)	1389
StyD4I	CCNGG	2 cut(s)	688, 1220
TaaI	ACNGT	7 cut(s)	101, 269, 559, 701, 749, 850, 1049
TaiI	ACGT	4 cut(s)	898, 958, 1185, 1461
TaqI	TCGA	2 cut(s)	414, 671
TatI	WGTACW	1 cut(s)	789
TauI	GCSGC	1 cut(s)	176
TfiI	GAWTC	3 cut(s)	452, 668, 1241
Tru1I	TTAA	6 cut(s)	276, 728, 758, 939, 1487, 1496
Tru9I	TTAA	6 cut(s)	276, 728, 758, 939, 1487, 1496
TscAI	CASTG	3 cut(s)	31, 1054, 1421
TseFI	GTSAC	2 cut(s)	815, 1274
Tsp45I	GTSAC	2 cut(s)	815, 1274
TspDTI	ATGAA	9 cut(s)	651, 681, 795, 870, 936, 1023, 1132, 1337, 1443
TspGWI	ACGGA	2 cut(s)	132, 180
TspRI	CASTG	3 cut(s)	31, 1054, 1421
Van91I	CCANNNNNTGG	1 cut(s)	1236
VpaK11BI	GGWCC	3 cut(s)	21, 521, 1016
VspI	ATTAAT	1 cut(s)	1487
XapI	RAATTY	3 cut(s)	410, 506, 829
XceI	RCATGY	4 cut(s)	368, 647, 1063, 1408
XmiI	GTMKAC	2 cut(s)	288, 1254
XspI	CTAG	3 cut(s)	119, 518, 1305
ZrmI	AGTACT	1 cut(s)	791
Zsp2I	ATGCAT	1 cut(s)	645

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.