Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0004262

Physical Location & Seq

Genomic Coordinates Reverse (-)

8531831 .. 8535745

Gene Structure 3915 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G106400.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1071 bp

ATGAGCTGCTTCAGTTGTTGTGTACAAGATGATATCCGCAAAGCTTCCGAGAATGGACCGTTTGTAGCAAATAACTCAGCAGGCAGTAGTGGAGGTTACTATCACAGAGAAACTGCACCAAAGGATACTCAGACTGTAAATATCCTACCCATTGCTGTCCCTGCCATTCCAGTCGATGAATTAAAAGATTTGACAGATAATTTTGGCACAAAGTCCTTAATTGGTGAGGGTTCATATGGAAGAGTATATCATGGTGTTCTGAAAAGTGGGCCAGCTGCAGCTATTAAAAAGTTAGATTCCAGTAAACAACCTGACCAAGAATTTCTATCACAGGTCTCCATGGTTTCAAGACTAAAACATGAAAATGTTGTTGAGCTTGTTGGTTATTGTATTGATGGTCCTCTCCGTCTCCTTGCCTATGAGTATGCTCCTAATGGGTCACTTCATGATATTCTCCACGGACGGAAAGGTGTTAAGGGAGCACAGGCAGGTCCAGTTCTGTCATGGGTGCAAAGGGTTAAAATTGCTGTTGGAGCAGCAAGAGGACTTGAATATTTACATGAAAAGGCTCAGCCTCATATAATCCATCGTGATATTAAGTCCTGCAATATACTGCTTTTTGATGATGATGTTGCAAAGATTGCTGACTTTGATCTGTCCAATCAAGCCCCTGATATGGCTGCACGTCTTCATTCCACTCGTGTTCTTGGGACTTTTGGTTATCATGCTCCAGAATATGCAATGACCGGACAGCTGAGTTCAAAAAGTGATGTTTACAGCTTTGGTGTAGTTCTGCTTGAACTCTTGACTGGGCGCAAACCTGTTGATCACACATTGCCACGTGGACAGCAGAGCCTTGTGACATGGGCAACACCGAAACTCAGTGAAGATAAGGTGAAGCAGTGTGTTGATGCTAGACTCAATGGAGAATACCCTTCCAAGGCAGTTGCAAAGCTGGCTGCTGTTGCTGCCTTGTGCGTCCAATATGAAGCTGATTTTCGGCCAAATATGAGCATTGTCGTCAAGGCTCTACAGCCGCTATTGAATGCTCGGTCCGGCCCCCACCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

357

Amino Acids

38.67

Weight (kDa)

8.08

Isoelectric Point (pI)

30.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004262)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48210 AT1G48210 AT1G48210 AT1G48210 AT1G48210 AT1G48210 AT1G48210 AT1G48220 AT3G17410 AT3G17410
fragaria_vesca	FvH4_4g21440 FvH4_4g21440 FvH4_4g21440
malus_domestica	MD13G1141200.v1.1 MD16G1137300.v1.1
prunus_persica	Prupe.1G106400_v2.0.a1 Prupe.1G106400_v2.0.a1 Prupe.1G106400_v2.0.a1 Prupe.1G106400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0427371
rosa_laevigata	RLG00000007249
rosa_multiflora	Rmu_co8130356.1_g000001 Rmu_co8298183.1_g000001 Rmu_sc0003813.1_g000019
rosa_roxburghii	Rroxscaffold_1G00008890 Rroxscaffold_5G00369040
rosa_rugosa	Rorug04G0217100
rosa_samantha	Rh4AG273500 Rh4BG279100 Rh4DG276500 Rh5DG369800
rosa_wichuraiana	Rw4G023720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	479
AciI	CCGC	2 cut(s)	37, 1037
AcoI	YGGCCR	1 cut(s)	1001
AcsI	RAATTY	1 cut(s)	320
AcvI	CACGTG	1 cut(s)	842
AfaI	GTAC	1 cut(s)	24
AfiI	CCNNNNNNNGG	2 cut(s)	676, 940
AgsI	TTSAA	5 cut(s)	348, 551, 762, 800, 1045
AjiI	CACGTC	1 cut(s)	686
AluBI	AGCT	9 cut(s)	6, 44, 275, 281, 376, 754, 780, 955, 992
AluI	AGCT	9 cut(s)	6, 44, 275, 281, 376, 754, 780, 955, 992
Alw21I	GWGCWC	1 cut(s)	484
Alw26I	GTCTC	2 cut(s)	340, 413
AoxI	GGCC	3 cut(s)	269, 1001, 1057
ApeKI	GCWGC	7 cut(s)	6, 275, 278, 536, 680, 959, 968
ApoI	RAATTY	1 cut(s)	320
AspLEI	GCGC	1 cut(s)	816
AspS9I	GGNCC	6 cut(s)	56, 269, 398, 491, 1053, 1058
AsuHPI	GGTGA	2 cut(s)	236, 907
AvaII	GGWCC	4 cut(s)	56, 398, 491, 1053
BauI	CACGAG	1 cut(s)	699
BbrPI	CACGTG	1 cut(s)	842
BbsI	GAAGAC	1 cut(s)	680
Bbv12I	GWGCWC	1 cut(s)	484
BbvI	GCAGC	6 cut(s)	262, 290, 548, 667, 946, 955
BccI	CCATC	2 cut(s)	389, 594
BciVI	GTATCC	1 cut(s)	118
BclI	TGATCA	1 cut(s)	826
BcoDI	GTCTC	2 cut(s)	340, 413
BfaI	CTAG	1 cut(s)	915
BfmI	CTRYAG	2 cut(s)	276, 1031
BfuAI	ACCTGC	1 cut(s)	479
BfuI	GTATCC	1 cut(s)	118
BisI	GCNGC	8 cut(s)	7, 276, 279, 537, 681, 960, 969, 1037
BlpI	GCTNAGC	1 cut(s)	570
BlsI	GCNGC	8 cut(s)	8, 277, 280, 538, 682, 961, 970, 1038
Bme18I	GGWCC	4 cut(s)	56, 398, 491, 1053
BmgBI	CACGTC	1 cut(s)	686
BmgT120I	GGNCC	6 cut(s)	56, 269, 398, 491, 1053, 1058
BmiI	GGNNCC	1 cut(s)	1060
BmrI	ACTGGG	1 cut(s)	819
BmsI	GCATC	1 cut(s)	901
BmuI	ACTGGG	1 cut(s)	819
BpiI	GAAGAC	1 cut(s)	680
BpmI	CTGGAG	1 cut(s)	714
Bpu1102I	GCTNAGC	1 cut(s)	570
BsaAI	YACGTR	1 cut(s)	842
BsaI	GGTCTC	1 cut(s)	340
BsaJI	CCNNGG	3 cut(s)	339, 457, 939
BsaWI	WCCGGW	1 cut(s)	746
Bsc4I	CCNNNNNNNGG	2 cut(s)	676, 940
Bse1I	ACTGG	4 cut(s)	170, 300, 494, 814
Bse3DI	GCAATG	3 cut(s)	150, 747, 833
BseDI	CCNNGG	3 cut(s)	339, 457, 939
BseLI	CCNNNNNNNGG	2 cut(s)	676, 940
BseMI	GCAATG	3 cut(s)	150, 747, 833
BseMII	CTCAG	5 cut(s)	90, 143, 584, 746, 895
BseNI	ACTGG	4 cut(s)	170, 300, 494, 814
BseXI	GCAGC	6 cut(s)	262, 290, 548, 667, 946, 955
BsgI	GTGCAG	2 cut(s)	99, 666
BshFI	GGCC	3 cut(s)	271, 1003, 1059
BsiHKAI	GWGCWC	1 cut(s)	484
BsiSI	CCGG	2 cut(s)	747, 1056
BslFI	GGGAC	2 cut(s)	143, 724
BslI	CCNNNNNNNGG	2 cut(s)	676, 940
BsmAI	GTCTC	2 cut(s)	340, 413
BsmBI	CGTCTC	1 cut(s)	413
BsmFI	GGGAC	2 cut(s)	143, 724
BsmI	GAATGC	1 cut(s)	1051
BsnI	GGCC	3 cut(s)	271, 1003, 1059
Bso31I	GGTCTC	1 cut(s)	340
Bsp1286I	GDGCHC	1 cut(s)	484
Bsp1407I	TGTACA	1 cut(s)	22
Bsp143I	GATC	2 cut(s)	652, 826
Bsp1720I	GCTNAGC	1 cut(s)	570
Bsp19I	CCATGG	1 cut(s)	339
BspACI	CCGC	2 cut(s)	37, 1037
BspANI	GGCC	3 cut(s)	271, 1003, 1059
BspCNI	CTCAG	5 cut(s)	89, 142, 583, 747, 894
BspHI	TCATGA	1 cut(s)	445
BspLI	GGNNCC	1 cut(s)	1060
BspMAI	CTGCAG	1 cut(s)	280
BspMI	ACCTGC	1 cut(s)	479
BspTNI	GGTCTC	1 cut(s)	340
BsrDI	GCAATG	3 cut(s)	150, 747, 833
BsrGI	TGTACA	1 cut(s)	22
BsrI	ACTGG	4 cut(s)	170, 300, 494, 814
BssECI	CCNNGG	3 cut(s)	339, 457, 939
BssMI	GATC	2 cut(s)	652, 826
BssSI	CACGAG	1 cut(s)	699
BssT1I	CCWWGG	2 cut(s)	339, 939
Bst2BI	CACGAG	1 cut(s)	699
Bst4CI	ACNGT	2 cut(s)	60, 136
Bst6I	CTCTTC	1 cut(s)	235
BstAPI	GCANNNNNTGC	1 cut(s)	641
BstAUI	TGTACA	1 cut(s)	22
BstBAI	YACGTR	1 cut(s)	842
BstC8I	GCNNGC	3 cut(s)	82, 273, 957
BstDEI	CTNAG	5 cut(s)	76, 129, 570, 755, 881
BstDSI	CCRYGG	2 cut(s)	339, 457
BstHHI	GCGC	1 cut(s)	816
BstKTI	GATC	2 cut(s)	655, 829
BstMAI	GTCTC	2 cut(s)	340, 413
BstMBI	GATC	2 cut(s)	652, 826
BstMWI	GCNNNNNNNGC	6 cut(s)	161, 533, 641, 956, 965, 968
BstSFI	CTRYAG	2 cut(s)	276, 1031
BstV1I	GCAGC	6 cut(s)	262, 290, 548, 667, 946, 955
BstV2I	GAAGAC	1 cut(s)	680
BsuI	GTATCC	1 cut(s)	118
BsuRI	GGCC	3 cut(s)	271, 1003, 1059
BtgI	CCRYGG	2 cut(s)	339, 457
BtrI	CACGTC	1 cut(s)	686
BtsI	GCAGTG	1 cut(s)	908
BtsIMutI	CAGTG	2 cut(s)	889, 908
BveI	ACCTGC	1 cut(s)	479
Cac8I	GCNNGC	3 cut(s)	82, 273, 957
CciI	TCATGA	1 cut(s)	445
CfoI	GCGC	1 cut(s)	816
Cfr13I	GGNCC	6 cut(s)	56, 269, 398, 491, 1053, 1058
CpoI	CGGWCCG	1 cut(s)	1053
CseI	GACGC	1 cut(s)	967
Csp6I	GTAC	1 cut(s)	23
CspI	CGGWCCG	1 cut(s)	1053
CviAII	CATG	8 cut(s)	251, 340, 359, 446, 504, 560, 725, 864
CviQI	GTAC	1 cut(s)	23
DdeI	CTNAG	5 cut(s)	76, 129, 570, 755, 881
DpnI	GATC	2 cut(s)	654, 828
DpnII	GATC	2 cut(s)	652, 826
EaeI	YGGCCR	1 cut(s)	1001
Eam1104I	CTCTTC	1 cut(s)	235
EarI	CTCTTC	1 cut(s)	235
Eco130I	CCWWGG	2 cut(s)	339, 939
Eco31I	GGTCTC	1 cut(s)	340
Eco32I	GATATC	1 cut(s)	34
Eco47I	GGWCC	4 cut(s)	56, 398, 491, 1053
Eco72I	CACGTG	1 cut(s)	842
EcoRV	GATATC	1 cut(s)	34
EcoT14I	CCWWGG	2 cut(s)	339, 939
ErhI	CCWWGG	2 cut(s)	339, 939
Esp3I	CGTCTC	1 cut(s)	413
FaeI	CATG	8 cut(s)	254, 343, 362, 449, 507, 563, 728, 867
FaqI	GGGAC	2 cut(s)	143, 724
FatI	CATG	8 cut(s)	250, 339, 358, 445, 503, 559, 724, 863
FauNDI	CATATG	1 cut(s)	235
FbaI	TGATCA	1 cut(s)	826
Fnu4HI	GCNGC	8 cut(s)	7, 276, 279, 537, 681, 960, 969, 1037
Fsp4HI	GCNGC	8 cut(s)	7, 276, 279, 537, 681, 960, 969, 1037
FspBI	CTAG	1 cut(s)	915
GlaI	GCGC	1 cut(s)	815
GluI	GCNGC	8 cut(s)	7, 276, 279, 537, 681, 960, 969, 1037
GsuI	CTGGAG	1 cut(s)	714
HaeIII	GGCC	3 cut(s)	271, 1003, 1059
HapII	CCGG	2 cut(s)	747, 1056
HgaI	GACGC	1 cut(s)	967
HhaI	GCGC	1 cut(s)	816
Hin1II	CATG	8 cut(s)	254, 343, 362, 449, 507, 563, 728, 867
Hin6I	GCGC	1 cut(s)	814
HinP1I	GCGC	1 cut(s)	814
HindIII	AAGCTT	1 cut(s)	42
HinfI	GANTC	2 cut(s)	296, 918
HpaII	CCGG	2 cut(s)	747, 1056
HphI	GGTGA	2 cut(s)	236, 907
Hpy166II	GTNNAC	4 cut(s)	23, 305, 775, 845
Hpy188I	TCNGA	3 cut(s)	49, 132, 261
Hpy188III	TCNNGA	5 cut(s)	348, 446, 590, 731, 805
Hpy8I	GTNNAC	4 cut(s)	23, 305, 775, 845
HpyAV	CCTTC	1 cut(s)	945
HpyCH4III	ACNGT	2 cut(s)	60, 136
HpyCH4IV	ACGT	2 cut(s)	685, 841
HpyCH4V	TGCA	8 cut(s)	116, 278, 511, 606, 635, 683, 740, 950
HpyF10VI	GCNNNNNNNGC	6 cut(s)	161, 533, 641, 956, 965, 968
HpyF3I	CTNAG	5 cut(s)	76, 129, 570, 755, 881
HpySE526I	ACGT	2 cut(s)	685, 841
Hsp92II	CATG	8 cut(s)	254, 343, 362, 449, 507, 563, 728, 867
HspAI	GCGC	1 cut(s)	814
Ksp22I	TGATCA	1 cut(s)	826
Kzo9I	GATC	2 cut(s)	652, 826
LmnI	GCTCC	4 cut(s)	433, 479, 533, 733
Lsp1109I	GCAGC	6 cut(s)	262, 290, 548, 667, 946, 955
LweI	GCATC	1 cut(s)	901
MaeI	CTAG	1 cut(s)	915
MaeII	ACGT	2 cut(s)	685, 841
MaeIII	GTNAC	3 cut(s)	95, 438, 859
MalI	GATC	2 cut(s)	654, 828
MboI	GATC	2 cut(s)	652, 826
MboII	GAAGA	3 cut(s)	252, 680, 899
MhlI	GDGCHC	1 cut(s)	484
MluCI	AATT	5 cut(s)	179, 199, 219, 320, 522
MlyI	GAGTC	1 cut(s)	912
MmeI	TCCRAC	1 cut(s)	511
MnlI	CCTC	5 cut(s)	86, 220, 411, 536, 585
MseI	TTAA	6 cut(s)	182, 218, 285, 474, 519, 597
MslI	CAYNNNNRTG	1 cut(s)	363
MspA1I	CMGCKG	2 cut(s)	275, 754
MspI	CCGG	2 cut(s)	747, 1056
Mva1269I	GAATGC	1 cut(s)	1051
MwoI	GCNNNNNNNGC	6 cut(s)	161, 533, 641, 956, 965, 968
NcoI	CCATGG	1 cut(s)	339
NdeI	CATATG	1 cut(s)	235
NdeII	GATC	2 cut(s)	652, 826
NlaIII	CATG	8 cut(s)	254, 343, 362, 449, 507, 563, 728, 867
NlaIV	GGNNCC	1 cut(s)	1060
NmuCI	GTSAC	2 cut(s)	438, 859
PagI	TCATGA	1 cut(s)	445
PctI	GAATGC	1 cut(s)	1051
PfeI	GAWTC	1 cut(s)	296
PkrI	GCNGC	8 cut(s)	8, 277, 280, 538, 682, 961, 970, 1038
PleI	GAGTC	1 cut(s)	912
PmaCI	CACGTG	1 cut(s)	842
PmlI	CACGTG	1 cut(s)	842
PpsI	GAGTC	1 cut(s)	912
Ppu21I	YACGTR	1 cut(s)	842
PspCI	CACGTG	1 cut(s)	842
PspN4I	GGNNCC	1 cut(s)	1060
PspPI	GGNCC	6 cut(s)	56, 269, 398, 491, 1053, 1058
PstI	CTGCAG	1 cut(s)	280
PvuII	CAGCTG	2 cut(s)	275, 754
RsaI	GTAC	1 cut(s)	24
RsaNI	GTAC	1 cut(s)	23
RseI	CAYNNNNRTG	1 cut(s)	363
Rsr2I	CGGWCCG	1 cut(s)	1053
RsrII	CGGWCCG	1 cut(s)	1053
SaqAI	TTAA	6 cut(s)	182, 218, 285, 474, 519, 597
SatI	GCNGC	8 cut(s)	7, 276, 279, 537, 681, 960, 969, 1037
Sau3AI	GATC	2 cut(s)	652, 826
Sau96I	GGNCC	6 cut(s)	56, 269, 398, 491, 1053, 1058
SchI	GAGTC	1 cut(s)	912
SduI	GDGCHC	1 cut(s)	484
SfaNI	GCATC	1 cut(s)	901
SfcI	CTRYAG	2 cut(s)	276, 1031
SinI	GGWCC	4 cut(s)	56, 398, 491, 1053
SmiMI	CAYNNNNRTG	1 cut(s)	363
Sse9I	AATT	5 cut(s)	179, 199, 219, 320, 522
SsiI	CCGC	2 cut(s)	37, 1037
SspI	AATATT	1 cut(s)	554
SspMI	CTAG	1 cut(s)	915
StyI	CCWWGG	2 cut(s)	339, 939
TaaI	ACNGT	2 cut(s)	60, 136
TaiI	ACGT	2 cut(s)	688, 844
TaqI	TCGA	1 cut(s)	174
TaqII	GACCGA	1 cut(s)	1041
TasI	AATT	5 cut(s)	179, 199, 219, 320, 522
TatI	WGTACW	1 cut(s)	22
TauI	GCSGC	1 cut(s)	1039
TfiI	GAWTC	1 cut(s)	296
Tru1I	TTAA	6 cut(s)	182, 218, 285, 474, 519, 597
Tru9I	TTAA	6 cut(s)	182, 218, 285, 474, 519, 597
TscAI	CASTG	2 cut(s)	889, 908
TseFI	GTSAC	2 cut(s)	438, 859
TseI	GCWGC	7 cut(s)	6, 275, 278, 536, 680, 959, 968
Tsp45I	GTSAC	2 cut(s)	438, 859
TspDTI	ATGAA	7 cut(s)	192, 222, 375, 434, 576, 680, 1002
TspGWI	ACGGA	3 cut(s)	395, 474, 478
TspRI	CASTG	2 cut(s)	889, 908
VpaK11BI	GGWCC	4 cut(s)	56, 398, 491, 1053
XapI	RAATTY	1 cut(s)	320
XcmI	CCANNNNNNNNNTGG	1 cut(s)	501
XspI	CTAG	1 cut(s)	915

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.