RLG00000007249
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
14925849 .. 14929001
3153 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007249

Sequence Viewer

Length: 1182 bp
ATGGCCCTTCTTCTTCTGCGAAACCATAGCCGGCTTCACTTTTCTCACTTCAATCCAACACTTTTAGTGAAAACCCAATTCCCAAAACCATCTGAGCACACCAAAGGAGATAATATCATGGGCTGCTTCAGTTGTTGTGTACAAGATGATACCCATACACCTGCGGATCATGGACCATATGTACCGCATGGCTCAGCAGGCAATGGCTACCATCCCAGAGAAGCTGCACAGAGGGATACTCAGATTGTAAATATACAACCAATTGCTGTTGCTGCCATTCCAGTAGATGAATTGAAAGATCTGACTGATAATTTTGGCACAAAGGCCTTAATTGGTGAGGGTTCATATGGAAGAGTATATTACGGTGTTCTTAAGAGTGGGCCTGCTGCTGCTATTAAGAAGCTAGATGCCAGTAAACAACCACACCAAGAATTTTTGTCACAGGTCTCCATGGTTTCAAGACTAAAACATGAAAATGTCGTTGAGCTTGTTGGTTATTGTATCGATGGCCCTCTGCGTCTCCTTGCCTATGAGTATGCTCCTAATGGGTCTCTTCATGATATTCTTCATGGACGGAAAGGTGTCAAGGGGTCCGTTCCAGGTCCAGTTCTGTCATGGACACAAAGGGTTAAAATCGCGGTTGGAGCAGCAAGAGGACTTGAATATCTACATGAAAAGGCTCAGCCCCATATAATCCATCGTGATATTAAGTCCTGCAATATATTGCTTTTTGAAGATGACGTTGCAAAGATTGCTGATTTTGATCTGTCAAATCAAGCCCCTGATATGGCAGCGCGTCTTCATTCCACTCGTGTTCTTGGGACATTTGGTTATCATGCTCCAGAGTATGCAATGACTGGACAGCTGAGTTCAAAAAGTGATGTCTACAGCTTTGGTGTTGTCTTGCTTGAACTCTTGACTGGCCGTAAGCCTGTTGATCATACATTGCCACGTGGCCAACAGAGCCTTGTGACTTGGGCTACACCTAAACTGAGTGAGGATAAGGTGAAGCAGTGCGCTGATGCTAGACTCAATGGCGACTACCCTCCCAAGGCAGTTGCAAAGTTGGCTGCTGTTGCTGCCTTGTGCGTCCAGTATGAAGCTGATTTTCGGCCAAACATGAGCATTGTGGTCAAGGCTCTACAGCCTCTATTGAATGCTCGGTCTGGTCCTGCCCATTGA

Protein Analysis

394

Amino Acids

42.92

Weight (kDa)

8.54

Isoelectric Point (pI)

24.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 108 - 315 2.6e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 109 - 381 1e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 169
Acc36I ACCTGC 1 cut(s) 169
AccI GTMKAC 1 cut(s) 885
AccII CGCG 2 cut(s) 638, 796
AciI CCGC 3 cut(s) 164, 185, 638
AclWI GGATC 1 cut(s) 174
AcoI YGGCCR 3 cut(s) 922, 955, 1112
AcsI RAATTY 1 cut(s) 431
AcuI CTGAAG 1 cut(s) 112
AcvI CACGTG 1 cut(s) 953
AfaI GTAC 2 cut(s) 141, 183
AfiI CCNNNNNNNGG 2 cut(s) 787, 1051
AflII CTTAAG 1 cut(s) 371
AgsI TTSAA 8 cut(s) 52, 295, 459, 662, 734, 873, 911, 1156
AjnI CCWGG 1 cut(s) 598
AluBI AGCT 6 cut(s) 224, 403, 487, 865, 891, 1103
AluI AGCT 6 cut(s) 224, 403, 487, 865, 891, 1103
Alw21I GWGCWC 1 cut(s) 99
Alw26I GTCTC 3 cut(s) 451, 524, 555
AlwI GGATC 1 cut(s) 174
AoxI GGCC 7 cut(s) 3, 324, 380, 508, 922, 955, 1112
ApeKI GCWGC 9 cut(s) 123, 224, 272, 386, 389, 647, 791, 1070, 1079
ApoI RAATTY 1 cut(s) 431
AspLEI GCGC 2 cut(s) 796, 1019
AspS9I GGNCC 7 cut(s) 4, 173, 380, 509, 591, 602, 1169
AsuHPI GGTGA 2 cut(s) 347, 1018
AvaII GGWCC 4 cut(s) 173, 591, 602, 1169
BalI TGGCCA 1 cut(s) 957
BauI CACGAG 1 cut(s) 810
BbrPI CACGTG 1 cut(s) 953
BbsI GAAGAC 1 cut(s) 791
Bbv12I GWGCWC 1 cut(s) 99
BbvI GCAGC 9 cut(s) 110, 211, 259, 373, 376, 659, 803, 1057, 1066
BccI CCATC 4 cut(s) 97, 219, 500, 705
BceAI ACGGC 1 cut(s) 909
BciT130I CCWGG 1 cut(s) 600
BciVI GTATCC 1 cut(s) 229
BclI TGATCA 1 cut(s) 937
BcoDI GTCTC 3 cut(s) 451, 524, 555
BfaI CTAG 2 cut(s) 404, 1026
BfmI CTRYAG 2 cut(s) 886, 1142
BfrI CTTAAG 1 cut(s) 371
BfuAI ACCTGC 1 cut(s) 169
BfuI GTATCC 1 cut(s) 229
BglII AGATCT 1 cut(s) 298
BisI GCNGC 9 cut(s) 124, 225, 273, 387, 390, 648, 792, 1071, 1080
BlpI GCTNAGC 2 cut(s) 193, 681
BlsI GCNGC 9 cut(s) 125, 226, 274, 388, 391, 649, 793, 1072, 1081
Bme1390I CCNGG 1 cut(s) 600
Bme18I GGWCC 4 cut(s) 173, 591, 602, 1169
BmgT120I GGNCC 7 cut(s) 4, 173, 380, 509, 591, 602, 1169
BmiI GGNNCC 1 cut(s) 592
BmrFI CCNGG 1 cut(s) 600
BmsI GCATC 2 cut(s) 397, 1012
BpiI GAAGAC 1 cut(s) 791
BplI GAGNNNNNCTC 2 cut(s) 223, 255
BpmI CTGGAG 1 cut(s) 825
Bpu1102I GCTNAGC 2 cut(s) 193, 681
Bsa29I ATCGAT 1 cut(s) 504
BsaAI YACGTR 1 cut(s) 953
BsaBI GATNNNNATC 1 cut(s) 762
BsaI GGTCTC 2 cut(s) 451, 555
BsaJI CCNNGG 2 cut(s) 450, 1050
Bsc4I CCNNNNNNNGG 2 cut(s) 787, 1051
Bse118I RCCGGY 1 cut(s) 30
Bse1I ACTGG 6 cut(s) 281, 411, 605, 862, 925, 1093
Bse3DI GCAATG 3 cut(s) 208, 858, 944
Bse8I GATNNNNATC 1 cut(s) 762
BseBI CCWGG 1 cut(s) 600
BseCI ATCGAT 1 cut(s) 504
BseDI CCNNGG 2 cut(s) 450, 1050
BseGI GGATG 1 cut(s) 211
BseJI GATNNNNATC 1 cut(s) 762
BseLI CCNNNNNNNGG 2 cut(s) 787, 1051
BseMI GCAATG 3 cut(s) 208, 858, 944
BseMII CTCAG 6 cut(s) 84, 207, 254, 695, 857, 983
BseNI ACTGG 6 cut(s) 281, 411, 605, 862, 925, 1093
BseXI GCAGC 9 cut(s) 110, 211, 259, 373, 376, 659, 803, 1057, 1066
BsgI GTGCAG 1 cut(s) 210
Bsh1236I CGCG 2 cut(s) 638, 796
BshFI GGCC 7 cut(s) 5, 326, 382, 510, 924, 957, 1114
BshVI ATCGAT 1 cut(s) 504
BsiHKAI GWGCWC 1 cut(s) 99
BsiSI CCGG 1 cut(s) 31
BslFI GGGAC 1 cut(s) 835
BslI CCNNNNNNNGG 2 cut(s) 787, 1051
BsmAI GTCTC 3 cut(s) 451, 524, 555
BsmBI CGTCTC 1 cut(s) 524
BsmFI GGGAC 1 cut(s) 835
BsmI GAATGC 1 cut(s) 1162
BsnI GGCC 7 cut(s) 5, 326, 382, 510, 924, 957, 1114
Bso31I GGTCTC 2 cut(s) 451, 555
Bsp1286I GDGCHC 1 cut(s) 99
Bsp1407I TGTACA 1 cut(s) 139
Bsp143I GATC 4 cut(s) 166, 298, 763, 937
Bsp1720I GCTNAGC 2 cut(s) 193, 681
Bsp19I CCATGG 1 cut(s) 450
BspACI CCGC 3 cut(s) 164, 185, 638
BspANI GGCC 7 cut(s) 5, 326, 382, 510, 924, 957, 1114
BspCNI CTCAG 6 cut(s) 85, 206, 253, 694, 858, 984
BspDI ATCGAT 1 cut(s) 504
BspFNI CGCG 2 cut(s) 638, 796
BspHI TCATGA 1 cut(s) 556
BspLI GGNNCC 1 cut(s) 592
BspMI ACCTGC 1 cut(s) 169
BspPI GGATC 1 cut(s) 174
BspTI CTTAAG 1 cut(s) 371
BspTNI GGTCTC 2 cut(s) 451, 555
BsrDI GCAATG 3 cut(s) 208, 858, 944
BsrFI RCCGGY 1 cut(s) 30
BsrGI TGTACA 1 cut(s) 139
BsrI ACTGG 6 cut(s) 281, 411, 605, 862, 925, 1093
BssAI RCCGGY 1 cut(s) 30
BssECI CCNNGG 2 cut(s) 450, 1050
BssMI GATC 4 cut(s) 166, 298, 763, 937
BssSI CACGAG 1 cut(s) 810
BssT1I CCWWGG 2 cut(s) 450, 1050
Bst2BI CACGAG 1 cut(s) 810
Bst2UI CCWGG 1 cut(s) 600
Bst4CI ACNGT 1 cut(s) 365
Bst6I CTCTTC 2 cut(s) 346, 558
BstAFI CTTAAG 1 cut(s) 371
BstAPI GCANNNNNTGC 1 cut(s) 752
BstAUI TGTACA 1 cut(s) 139
BstBAI YACGTR 1 cut(s) 953
BstC8I GCNNGC 3 cut(s) 32, 199, 384
BstDEI CTNAG 6 cut(s) 93, 193, 240, 681, 866, 992
BstDSI CCRYGG 1 cut(s) 450
BstF5I GGATG 1 cut(s) 211
BstFNI CGCG 2 cut(s) 638, 796
BstHHI GCGC 2 cut(s) 796, 1019
BstKTI GATC 4 cut(s) 169, 301, 766, 940
BstMAI GTCTC 3 cut(s) 451, 524, 555
BstMBI GATC 4 cut(s) 166, 298, 763, 937
BstMWI GCNNNNNNNGC 8 cut(s) 198, 272, 644, 752, 963, 1067, 1076, 1079
BstNI CCWGG 1 cut(s) 600
BstSCI CCNGG 1 cut(s) 598
BstSFI CTRYAG 2 cut(s) 886, 1142
BstUI CGCG 2 cut(s) 638, 796
BstV1I GCAGC 9 cut(s) 110, 211, 259, 373, 376, 659, 803, 1057, 1066
BstV2I GAAGAC 1 cut(s) 791
BstX2I RGATCY 1 cut(s) 298
BstYI RGATCY 1 cut(s) 298
Bsu15I ATCGAT 1 cut(s) 504
BsuI GTATCC 1 cut(s) 229
BsuRI GGCC 7 cut(s) 5, 326, 382, 510, 924, 957, 1114
BsuTUI ATCGAT 1 cut(s) 504
BtgI CCRYGG 1 cut(s) 450
BtsCI GGATG 1 cut(s) 211
BtsI GCAGTG 1 cut(s) 1019
BtsIMutI CAGTG 1 cut(s) 1019
BveI ACCTGC 1 cut(s) 169
Cac8I GCNNGC 3 cut(s) 32, 199, 384
CciI TCATGA 1 cut(s) 556
CfoI GCGC 2 cut(s) 796, 1019
Cfr10I RCCGGY 1 cut(s) 30
Cfr13I GGNCC 7 cut(s) 4, 173, 380, 509, 591, 602, 1169
ClaI ATCGAT 1 cut(s) 504
CseI GACGC 3 cut(s) 506, 785, 1078
Csp6I GTAC 2 cut(s) 140, 182
CviQI GTAC 2 cut(s) 140, 182
DdeI CTNAG 6 cut(s) 93, 193, 240, 681, 866, 992
DpnI GATC 4 cut(s) 168, 300, 765, 939
DpnII GATC 4 cut(s) 166, 298, 763, 937
EaeI YGGCCR 3 cut(s) 922, 955, 1112
Eam1104I CTCTTC 2 cut(s) 346, 558
EarI CTCTTC 2 cut(s) 346, 558
Eco130I CCWWGG 2 cut(s) 450, 1050
Eco147I AGGCCT 1 cut(s) 326
Eco31I GGTCTC 2 cut(s) 451, 555
Eco47I GGWCC 4 cut(s) 173, 591, 602, 1169
Eco57I CTGAAG 1 cut(s) 112
Eco72I CACGTG 1 cut(s) 953
EcoRII CCWGG 1 cut(s) 598
EcoT14I CCWWGG 2 cut(s) 450, 1050
ErhI CCWWGG 2 cut(s) 450, 1050
Esp3I CGTCTC 1 cut(s) 524
FaqI GGGAC 1 cut(s) 835
FauNDI CATATG 2 cut(s) 178, 346
FbaI TGATCA 1 cut(s) 937
FblI GTMKAC 1 cut(s) 885
Fnu4HI GCNGC 9 cut(s) 124, 225, 273, 387, 390, 648, 792, 1071, 1080
FokI GGATG 1 cut(s) 198
Fsp4HI GCNGC 9 cut(s) 124, 225, 273, 387, 390, 648, 792, 1071, 1080
FspBI CTAG 2 cut(s) 404, 1026
GlaI GCGC 2 cut(s) 795, 1018
GluI GCNGC 9 cut(s) 124, 225, 273, 387, 390, 648, 792, 1071, 1080
GsuI CTGGAG 1 cut(s) 825
HaeIII GGCC 7 cut(s) 5, 326, 382, 510, 924, 957, 1114
HapII CCGG 1 cut(s) 31
HgaI GACGC 3 cut(s) 506, 785, 1078
HhaI GCGC 2 cut(s) 796, 1019
Hin6I GCGC 2 cut(s) 794, 1017
HinP1I GCGC 2 cut(s) 794, 1017
HinfI GANTC 1 cut(s) 1029
HpaII CCGG 1 cut(s) 31
HphI GGTGA 2 cut(s) 347, 1018
Hpy166II GTNNAC 3 cut(s) 140, 416, 886
Hpy188I TCNGA 3 cut(s) 94, 243, 303
Hpy188III TCNNGA 5 cut(s) 459, 557, 701, 842, 916
Hpy8I GTNNAC 3 cut(s) 140, 416, 886
HpyAV CCTTC 1 cut(s) 17
HpyCH4III ACNGT 1 cut(s) 365
HpyCH4IV ACGT 2 cut(s) 741, 952
HpyCH4V TGCA 5 cut(s) 227, 717, 746, 851, 1061
HpyF10VI GCNNNNNNNGC 8 cut(s) 198, 272, 644, 752, 963, 1067, 1076, 1079
HpyF3I CTNAG 6 cut(s) 93, 193, 240, 681, 866, 992
HpySE526I ACGT 2 cut(s) 741, 952
HspAI GCGC 2 cut(s) 794, 1017
KroI GCCGGC 1 cut(s) 30
KroNI GCCGGC 1 cut(s) 32
Ksp22I TGATCA 1 cut(s) 937
Kzo9I GATC 4 cut(s) 166, 298, 763, 937
LmnI GCTCC 3 cut(s) 544, 644, 844
Lsp1109I GCAGC 9 cut(s) 110, 211, 259, 373, 376, 659, 803, 1057, 1066
LweI GCATC 2 cut(s) 397, 1012
MaeI CTAG 2 cut(s) 404, 1026
MaeII ACGT 2 cut(s) 741, 952
MaeIII GTNAC 2 cut(s) 438, 970
MalI GATC 4 cut(s) 168, 300, 765, 939
MboI GATC 4 cut(s) 166, 298, 763, 937
MboII GAAGA 6 cut(s) 5, 363, 545, 557, 746, 791
MfeI CAATTG 1 cut(s) 261
MflI RGATCY 1 cut(s) 298
MhlI GDGCHC 1 cut(s) 99
MlsI TGGCCA 1 cut(s) 957
MluCI AATT 6 cut(s) 77, 261, 290, 310, 330, 431
MluNI TGGCCA 1 cut(s) 957
MlyI GAGTC 1 cut(s) 1023
MmeI TCCRAC 2 cut(s) 80, 622
MnlI CCTC 7 cut(s) 225, 331, 522, 647, 991, 1056, 1158
Mox20I TGGCCA 1 cut(s) 957
MroNI GCCGGC 1 cut(s) 30
MscI TGGCCA 1 cut(s) 957
MseI TTAA 5 cut(s) 329, 372, 396, 630, 708
MslI CAYNNNNRTG 1 cut(s) 474
Msp20I TGGCCA 1 cut(s) 957
MspA1I CMGCKG 1 cut(s) 865
MspCI CTTAAG 1 cut(s) 371
MspI CCGG 1 cut(s) 31
MspR9I CCNGG 1 cut(s) 600
MunI CAATTG 1 cut(s) 261
Mva1269I GAATGC 1 cut(s) 1162
MvaI CCWGG 1 cut(s) 600
MvnI CGCG 2 cut(s) 638, 796
MwoI GCNNNNNNNGC 8 cut(s) 198, 272, 644, 752, 963, 1067, 1076, 1079
NaeI GCCGGC 1 cut(s) 32
NcoI CCATGG 1 cut(s) 450
NdeI CATATG 2 cut(s) 178, 346
NdeII GATC 4 cut(s) 166, 298, 763, 937
NgoMIV GCCGGC 1 cut(s) 30
NlaIV GGNNCC 1 cut(s) 592
NmuCI GTSAC 2 cut(s) 438, 970
PagI TCATGA 1 cut(s) 556
PaqCI CACCTGC 1 cut(s) 169
PceI AGGCCT 1 cut(s) 326
PctI GAATGC 1 cut(s) 1162
PdiI GCCGGC 1 cut(s) 32
PkrI GCNGC 9 cut(s) 125, 226, 274, 388, 391, 649, 793, 1072, 1081
PleI GAGTC 1 cut(s) 1023
PmaCI CACGTG 1 cut(s) 953
PmlI CACGTG 1 cut(s) 953
PpsI GAGTC 1 cut(s) 1023
Ppu21I YACGTR 1 cut(s) 953
Psp6I CCWGG 1 cut(s) 598
PspCI CACGTG 1 cut(s) 953
PspGI CCWGG 1 cut(s) 598
PspN4I GGNNCC 1 cut(s) 592
PspPI GGNCC 7 cut(s) 4, 173, 380, 509, 591, 602, 1169
PsuI RGATCY 1 cut(s) 298
PvuII CAGCTG 1 cut(s) 865
RsaI GTAC 2 cut(s) 141, 183
RsaNI GTAC 2 cut(s) 140, 182
RseI CAYNNNNRTG 1 cut(s) 474
SaqAI TTAA 5 cut(s) 329, 372, 396, 630, 708
SatI GCNGC 9 cut(s) 124, 225, 273, 387, 390, 648, 792, 1071, 1080
Sau3AI GATC 4 cut(s) 166, 298, 763, 937
Sau96I GGNCC 7 cut(s) 4, 173, 380, 509, 591, 602, 1169
SchI GAGTC 1 cut(s) 1023
ScrFI CCNGG 1 cut(s) 600
SduI GDGCHC 1 cut(s) 99
SfaNI GCATC 2 cut(s) 397, 1012
SfcI CTRYAG 2 cut(s) 886, 1142
SinI GGWCC 4 cut(s) 173, 591, 602, 1169
SmiMI CAYNNNNRTG 1 cut(s) 474
SmlI CTYRAG 1 cut(s) 371
SmoI CTYRAG 1 cut(s) 371
Sse9I AATT 6 cut(s) 77, 261, 290, 310, 330, 431
SseBI AGGCCT 1 cut(s) 326
SsiI CCGC 3 cut(s) 164, 185, 638
SspMI CTAG 2 cut(s) 404, 1026
StuI AGGCCT 1 cut(s) 326
StyD4I CCNGG 1 cut(s) 598
StyI CCWWGG 2 cut(s) 450, 1050
TaaI ACNGT 1 cut(s) 365
TaiI ACGT 2 cut(s) 744, 955
TaqI TCGA 1 cut(s) 504
TaqII GACCGA 1 cut(s) 1152
TasI AATT 6 cut(s) 77, 261, 290, 310, 330, 431
TatI WGTACW 1 cut(s) 139
Tru1I TTAA 5 cut(s) 329, 372, 396, 630, 708
Tru9I TTAA 5 cut(s) 329, 372, 396, 630, 708
TscAI CASTG 1 cut(s) 1019
TseFI GTSAC 2 cut(s) 438, 970
TseI GCWGC 9 cut(s) 123, 224, 272, 386, 389, 647, 791, 1070, 1079
Tsp45I GTSAC 2 cut(s) 438, 970
TspDTI ATGAA 8 cut(s) 303, 333, 486, 545, 557, 687, 791, 1113
TspGWI ACGGA 2 cut(s) 583, 589
TspRI CASTG 1 cut(s) 1019
Vha464I CTTAAG 1 cut(s) 371
VpaK11BI GGWCC 4 cut(s) 173, 591, 602, 1169
XapI RAATTY 1 cut(s) 431
XcmI CCANNNNNNNNNTGG 1 cut(s) 612
XmiI GTMKAC 1 cut(s) 885
XspI CTAG 2 cut(s) 404, 1026
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.