Prupe.1G146100_v2.0.a1

Protein of unknown function (DUF679)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
11489016 .. 11489591
576 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G146100.1

Sequence Viewer

Length: 576 bp
ATGGGAGATTCTACAACCAGCAAGAAAACTGTCAACGACAGAGCATTAACAGGAGCAGGCAACCTCGTCAAAGTCCTCCCGACCGGCACCGTCTTCTTGTTCCAGTTCCTCAACCCTATCTTGACCAACAATGGCCAGTGCGCCGTCCTCAACAAATCCCTAAGCGCCATTCTCATCGCCATTTCCGGCTTGTCTTGCTTTTTTGCTTCCTTCACTGACAGTTACCCTGGCAGTGATGGAAAAACCCACTATGGGTTTGCAACAAGTACGGGTATTTGGCCCTCAAAAAATTCCGACTCTGTGGACTTGCCTGCTTATAAGCTTAGGCCTGGGGACTTTGCGCATGCCTTCCTTTCCTTGATTGTGTTTGCCGTTGTATCACTTTTGGACACCAACAGTGTCAGGTGCTTCTATCCAGGGTTTGAGTCCAGTGAGAAGGTTTTGCTGCAGGCGTTACCTCTTGTCATCGGTGCAGTTGCTAATGCTGTTTTCGTTGTGTTCCCTTGTACTCGCCATGGAATTGGATACCCCTCCTCATCAAGTTCTGATTCTTCACAAGACTCAGAGAAATCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

192

Amino Acids

20.2

Weight (kDa)

6.8

Isoelectric Point (pI)

36.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 318
Acc16I TGCGCA 1 cut(s) 342
AccB1I GGYRCC 1 cut(s) 86
AcoI YGGCCR 1 cut(s) 133
AcsI RAATTY 1 cut(s) 289
AfaI GTAC 2 cut(s) 268, 508
AfiI CCNNNNNNNGG 1 cut(s) 252
AjnI CCWGG 3 cut(s) 226, 328, 415
AluBI AGCT 1 cut(s) 322
AluI AGCT 1 cut(s) 322
AoxI GGCC 3 cut(s) 133, 278, 326
ApeKI GCWGC 1 cut(s) 445
ApoI RAATTY 1 cut(s) 289
AspLEI GCGC 3 cut(s) 143, 167, 343
AspS9I GGNCC 1 cut(s) 279
BalI TGGCCA 1 cut(s) 135
BanI GGYRCC 1 cut(s) 86
BbsI GAAGAC 1 cut(s) 85
BbvI GCAGC 1 cut(s) 432
BccI CCATC 1 cut(s) 230
BceAI ACGGC 2 cut(s) 128, 356
BciT130I CCWGG 3 cut(s) 228, 330, 417
BciVI GTATCC 1 cut(s) 518
BfmI CTRYAG 1 cut(s) 446
BfoI RGCGCY 1 cut(s) 168
BfuI GTATCC 1 cut(s) 518
BisI GCNGC 1 cut(s) 446
BlsI GCNGC 1 cut(s) 447
Bme1390I CCNGG 3 cut(s) 228, 330, 417
BmgT120I GGNCC 1 cut(s) 279
BmiI GGNNCC 1 cut(s) 88
BmrFI CCNGG 3 cut(s) 228, 330, 417
BpiI GAAGAC 1 cut(s) 85
Bpu10I CCTNAGC 2 cut(s) 161, 323
BsaJI CCNNGG 4 cut(s) 226, 329, 416, 514
Bsc4I CCNNNNNNNGG 1 cut(s) 252
Bse118I RCCGGY 1 cut(s) 83
Bse1I ACTGG 3 cut(s) 103, 136, 429
BseBI CCWGG 3 cut(s) 228, 330, 417
BseDI CCNNGG 4 cut(s) 226, 329, 416, 514
BseLI CCNNNNNNNGG 1 cut(s) 252
BseMII CTCAG 1 cut(s) 576
BseNI ACTGG 3 cut(s) 103, 136, 429
BseRI GAGGAG 1 cut(s) 523
BseXI GCAGC 1 cut(s) 432
BsgI GTGCAG 1 cut(s) 492
Bsh1285I CGRYCG 1 cut(s) 84
BshFI GGCC 3 cut(s) 135, 280, 328
BshNI GGYRCC 1 cut(s) 86
BsiEI CGRYCG 1 cut(s) 84
BsiSI CCGG 2 cut(s) 84, 186
BslFI GGGAC 1 cut(s) 347
BslI CCNNNNNNNGG 1 cut(s) 252
BsmFI GGGAC 1 cut(s) 347
BsnI GGCC 3 cut(s) 135, 280, 328
Bsp19I CCATGG 1 cut(s) 514
BspANI GGCC 3 cut(s) 135, 280, 328
BspCNI CTCAG 1 cut(s) 575
BspLI GGNNCC 1 cut(s) 88
BspMAI CTGCAG 1 cut(s) 450
BspT107I GGYRCC 1 cut(s) 86
BsrFI RCCGGY 1 cut(s) 83
BsrI ACTGG 3 cut(s) 103, 136, 429
BssAI RCCGGY 1 cut(s) 83
BssECI CCNNGG 4 cut(s) 226, 329, 416, 514
BssT1I CCWWGG 1 cut(s) 514
Bst2UI CCWGG 3 cut(s) 228, 330, 417
Bst4CI ACNGT 4 cut(s) 31, 91, 221, 398
BstC8I GCNNGC 4 cut(s) 58, 312, 345, 450
BstDEI CTNAG 3 cut(s) 161, 323, 562
BstDSI CCRYGG 1 cut(s) 514
BstH2I RGCGCY 1 cut(s) 168
BstHHI GCGC 3 cut(s) 143, 167, 343
BstMCI CGRYCG 1 cut(s) 84
BstMWI GCNNNNNNNGC 1 cut(s) 195
BstNI CCWGG 3 cut(s) 228, 330, 417
BstNSI RCATGY 1 cut(s) 347
BstSCI CCNGG 3 cut(s) 226, 328, 415
BstSFI CTRYAG 1 cut(s) 446
BstV1I GCAGC 1 cut(s) 432
BstV2I GAAGAC 1 cut(s) 85
BstXI CCANNNNNNTGG 1 cut(s) 521
BsuI GTATCC 1 cut(s) 518
BsuRI GGCC 3 cut(s) 135, 280, 328
BtgI CCRYGG 1 cut(s) 514
BtgZI GCGATG 1 cut(s) 160
BtsI GCAGTG 1 cut(s) 238
BtsIMutI CAGTG 5 cut(s) 143, 213, 238, 403, 436
Cac8I GCNNGC 4 cut(s) 58, 312, 345, 450
CfoI GCGC 3 cut(s) 143, 167, 343
Cfr10I RCCGGY 1 cut(s) 83
Cfr13I GGNCC 1 cut(s) 279
Csp6I GTAC 2 cut(s) 267, 507
CviAII CATG 2 cut(s) 344, 515
CviJI RGCY 5 cut(s) 135, 189, 280, 322, 328
CviKI_1 RGCY 5 cut(s) 135, 189, 280, 322, 328
CviQI GTAC 2 cut(s) 267, 507
DdeI CTNAG 3 cut(s) 161, 323, 562
EaeI YGGCCR 1 cut(s) 133
Eco130I CCWWGG 1 cut(s) 514
Eco147I AGGCCT 1 cut(s) 328
EcoRII CCWGG 3 cut(s) 226, 328, 415
EcoT14I CCWWGG 1 cut(s) 514
ErhI CCWWGG 1 cut(s) 514
FaeI CATG 2 cut(s) 347, 518
FaiI YATR 4 cut(s) 252, 318, 345, 516
FaqI GGGAC 1 cut(s) 347
FatI CATG 2 cut(s) 343, 514
Fnu4HI GCNGC 1 cut(s) 446
Fsp4HI GCNGC 1 cut(s) 446
FspI TGCGCA 1 cut(s) 342
GlaI GCGC 3 cut(s) 142, 166, 342
GluI GCNGC 1 cut(s) 446
HaeII RGCGCY 1 cut(s) 168
HaeIII GGCC 3 cut(s) 135, 280, 328
HapII CCGG 2 cut(s) 84, 186
HhaI GCGC 3 cut(s) 143, 167, 343
Hin1II CATG 2 cut(s) 347, 518
Hin6I GCGC 3 cut(s) 141, 165, 341
HinP1I GCGC 3 cut(s) 141, 165, 341
HincII GTYRAC 1 cut(s) 34
HindII GTYRAC 1 cut(s) 34
HindIII AAGCTT 1 cut(s) 320
HinfI GANTC 5 cut(s) 8, 296, 425, 548, 560
HpaII CCGG 2 cut(s) 84, 186
Hpy166II GTNNAC 2 cut(s) 34, 304
Hpy188I TCNGA 3 cut(s) 295, 547, 565
Hpy188III TCNNGA 3 cut(s) 79, 121, 573
Hpy8I GTNNAC 2 cut(s) 34, 304
HpyAV CCTTC 3 cut(s) 220, 358, 430
HpyCH4III ACNGT 4 cut(s) 31, 91, 221, 398
HpyCH4V TGCA 3 cut(s) 260, 448, 473
HpyF10VI GCNNNNNNNGC 1 cut(s) 195
HpyF3I CTNAG 3 cut(s) 161, 323, 562
Hsp92II CATG 2 cut(s) 347, 518
HspAI GCGC 3 cut(s) 141, 165, 341
LmnI GCTCC 1 cut(s) 53
Lsp1109I GCAGC 1 cut(s) 432
MaeIII GTNAC 2 cut(s) 221, 453
MboII GAAGA 2 cut(s) 85, 543
MlsI TGGCCA 1 cut(s) 135
MluCI AATT 2 cut(s) 289, 519
MluNI TGGCCA 1 cut(s) 135
MlyI GAGTC 3 cut(s) 290, 434, 554
MmeI TCCRAC 1 cut(s) 318
MnlI CCTC 8 cut(s) 74, 86, 119, 158, 292, 468, 541, 544
Mox20I TGGCCA 1 cut(s) 135
MscI TGGCCA 1 cut(s) 135
MseI TTAA 1 cut(s) 47
Msp20I TGGCCA 1 cut(s) 135
MspI CCGG 2 cut(s) 84, 186
MspR9I CCNGG 3 cut(s) 228, 330, 417
MvaI CCWGG 3 cut(s) 228, 330, 417
MwoI GCNNNNNNNGC 1 cut(s) 195
NcoI CCATGG 1 cut(s) 514
NlaIII CATG 2 cut(s) 347, 518
NlaIV GGNNCC 1 cut(s) 88
NsbI TGCGCA 1 cut(s) 342
NspI RCATGY 1 cut(s) 347
PaeI GCATGC 1 cut(s) 347
PceI AGGCCT 1 cut(s) 328
PfeI GAWTC 2 cut(s) 8, 548
PkrI GCNGC 1 cut(s) 447
PleI GAGTC 3 cut(s) 290, 433, 554
PpsI GAGTC 3 cut(s) 290, 433, 554
PsiI TTATAA 1 cut(s) 318
Psp6I CCWGG 3 cut(s) 226, 328, 415
PspGI CCWGG 3 cut(s) 226, 328, 415
PspN4I GGNNCC 1 cut(s) 88
PspPI GGNCC 1 cut(s) 279
PstI CTGCAG 1 cut(s) 450
RsaI GTAC 2 cut(s) 268, 508
RsaNI GTAC 2 cut(s) 267, 507
SaqAI TTAA 1 cut(s) 47
SatI GCNGC 1 cut(s) 446
Sau96I GGNCC 1 cut(s) 279
SchI GAGTC 3 cut(s) 290, 434, 554
ScrFI CCNGG 3 cut(s) 228, 330, 417
SetI ASST 5 cut(s) 66, 324, 407, 441, 460
SfcI CTRYAG 1 cut(s) 446
SphI GCATGC 1 cut(s) 347
Sse9I AATT 2 cut(s) 289, 519
SseBI AGGCCT 1 cut(s) 328
StuI AGGCCT 1 cut(s) 328
StyD4I CCNGG 3 cut(s) 226, 328, 415
StyI CCWWGG 1 cut(s) 514
TaaI ACNGT 4 cut(s) 31, 91, 221, 398
TasI AATT 2 cut(s) 289, 519
TatI WGTACW 1 cut(s) 506
TfiI GAWTC 2 cut(s) 8, 548
Tru1I TTAA 1 cut(s) 47
Tru9I TTAA 1 cut(s) 47
TscAI CASTG 5 cut(s) 143, 220, 238, 403, 436
TseI GCWGC 1 cut(s) 445
TspRI CASTG 5 cut(s) 143, 220, 238, 403, 436
XapI RAATTY 1 cut(s) 289
XceI RCATGY 1 cut(s) 347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.