Prupe.1G218100_v2.0.a1

histone H2A-K119 monoubiquitination

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
23298121 .. 23306201
8081 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G218100.1

Sequence Viewer

Length: 1251 bp
ATGACCATGGTTCCTGCTGCTCATCAAAACTTATCCAAACAACATCATCGATATCTTTACAGTGGTTATGGTGGATGCGGTGCCAATTACAACACGGCAGAAGATCAGAGCTTCGGTCTTATGAGTACTACTAGTCAAGTAGAAGAAGGTTATGAGTATAATTATTATTGTTGTAATAATAACAGCAGCAACAACAATAATAATATTAACAGTATCGTTACGGAATCTGATCATCTTCATCACCATCTTGCGGCGATTGATCCAATGGCTGAGGATGAGTCGAGAACCAACAGTGTAAACGAAGCCGGTTCAAGTTCAAAGGATGCTCCAGATGACAGGGACAACGAAGGATGGCTTCAATTGACTATAGGCGGCTCCAACAATCATCAACCAGCTGCAACCGTAGACCAAACCCCCAGAGGCTTAAGGGACACTCTTTCTGGTCCCGGTTTGATTGAGCTCGATCTATTACCACCTGGCCAAGACGCTGCTCTTTCATCATCCATACGACAAGTCAGGTCTATGCAGCATCATCATATGCCTCCAATGTTTCTTGTTCCTCCAGAAATCCGTCCTCTTTCTTCTTCTTCTTCCGCTAGGCTGCAATTTCATTCGAATTTCTCTACGAGTGCTACATCTTTATACTTTCAACACCCGGGGCCGGGAATGAGCACCTCCTCATCGAGTTTGTTTCCTCACCACGAGGGCAACTGGCAATTCAGGCCAACTGTCCCTCATAATAATATAGGGATGGCTTCAACCTCTTCTTCTTCTTATTCAACTTCCTCTTTCACACAACTGGGTTCCCCCTATTTTCCTCGTCCGCTTCATCATCAGTATCATCACGACATGAATGTTGCTGGGCCAAGCTTAGATTTCAGAGTTGTTGATCCTCCCAGGAGGCCCCAGTCGGGCATTTGGTTTATGCTCCAAGCATCCCAGAATCAAGAAAAAGAACCGTTCTTGCCACAGATACCCAAAAGCTACCTAAGAATCAAGGATAGAAGGATGACAATCCGGTTGATAAAGAAGTATCTGGTTAACAAGCTGAGACTGGATAGCGAATCAGAGGTAGAGATAACATGTAGAGGACAGCAGCTTCTACCTTTCTTGACGTTGCAGCATGTAAGAGATAACATATGGAGTCTAAGGGAAGCACCGGCTTTGCTTCCAGACTCCTCAACCACAGCCACTGATCATGTCATGGTGCTGCACTACGCTAGGACGGCCTCCACTTCTGCTTCAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

417

Amino Acids

46.43

Weight (kDa)

6.35

Isoelectric Point (pI)

57.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 80
AccI GTMKAC 1 cut(s) 405
AciI CCGC 5 cut(s) 78, 251, 372, 594, 824
AclWI GGATC 2 cut(s) 254, 884
AcoI YGGCCR 1 cut(s) 478
AcsI RAATTY 1 cut(s) 616
AfaI GTAC 1 cut(s) 127
AfiI CCNNNNNNNGG 4 cut(s) 250, 661, 662, 911
AflII CTTAAG 1 cut(s) 424
AflIII ACRYGT 1 cut(s) 1082
AgsI TTSAA 7 cut(s) 312, 318, 359, 650, 759, 780, 1245
AhlI ACTAGT 1 cut(s) 131
AjnI CCWGG 2 cut(s) 475, 896
AluBI AGCT 7 cut(s) 111, 395, 460, 870, 984, 1048, 1099
AluI AGCT 7 cut(s) 111, 395, 460, 870, 984, 1048, 1099
Alw21I GWGCWC 2 cut(s) 462, 674
Alw26I GTCTC 1 cut(s) 1045
AlwI GGATC 2 cut(s) 254, 884
AlwNI CAGNNNCTG 1 cut(s) 1193
Ama87I CYCGRG 1 cut(s) 655
AoxI GGCC 6 cut(s) 478, 659, 722, 863, 902, 1227
ApeKI GCWGC 9 cut(s) 17, 186, 395, 488, 526, 601, 1096, 1120, 1210
ApoI RAATTY 1 cut(s) 616
AspS9I GGNCC 4 cut(s) 443, 659, 863, 903
AsuC2I CCSGG 4 cut(s) 447, 656, 657, 663
AsuHPI GGTGA 2 cut(s) 233, 689
AsuII TTCGAA 1 cut(s) 614
AvaI CYCGRG 1 cut(s) 655
AvaII GGWCC 1 cut(s) 443
BalI TGGCCA 1 cut(s) 480
BanI GGYRCC 1 cut(s) 80
BanII GRGCYC 1 cut(s) 462
BauI CACGAG 1 cut(s) 701
Bbv12I GWGCWC 2 cut(s) 462, 674
BbvCI CCTCAGC 1 cut(s) 270
BbvI GCAGC 9 cut(s) 4, 198, 382, 475, 538, 588, 1108, 1132, 1197
BccI CCATC 3 cut(s) 252, 345, 745
BceAI ACGGC 2 cut(s) 111, 1242
BciT130I CCWGG 2 cut(s) 477, 898
BclI TGATCA 2 cut(s) 229, 1195
BcnI CCSGG 4 cut(s) 447, 656, 657, 663
BcoDI GTCTC 1 cut(s) 1045
BcuI ACTAGT 1 cut(s) 131
BfaI CTAG 3 cut(s) 132, 597, 1221
BfmI CTRYAG 1 cut(s) 366
BfrI CTTAAG 1 cut(s) 424
BmcAI AGTACT 1 cut(s) 127
Bme1390I CCNGG 6 cut(s) 447, 477, 656, 657, 663, 898
Bme18I GGWCC 1 cut(s) 443
BmeT110I CYCGRG 1 cut(s) 655
BmgT120I GGNCC 4 cut(s) 443, 659, 863, 903
BmiI GGNNCC 7 cut(s) 12, 82, 376, 445, 660, 805, 905
BmrFI CCNGG 6 cut(s) 447, 477, 656, 657, 663, 898
BmrI ACTGGG 2 cut(s) 809, 901
BmsI GCATC 4 cut(s) 65, 313, 538, 944
BmuI ACTGGG 2 cut(s) 809, 901
BpmI CTGGAG 2 cut(s) 312, 546
Bpu10I CCTNAGC 1 cut(s) 270
Bpu14I TTCGAA 1 cut(s) 614
BpuMI CCSGG 4 cut(s) 447, 656, 657, 663
Bsa29I ATCGAT 1 cut(s) 49
BsaBI GATNNNNATC 1 cut(s) 1013
BsaJI CCNNGG 4 cut(s) 6, 655, 656, 896
BsaWI WCCGGW 1 cut(s) 1017
Bsc4I CCNNNNNNNGG 4 cut(s) 250, 661, 662, 911
Bse118I RCCGGY 2 cut(s) 305, 1159
Bse1I ACTGG 4 cut(s) 716, 804, 907, 1059
Bse8I GATNNNNATC 1 cut(s) 1013
BseBI CCWGG 2 cut(s) 477, 898
BseCI ATCGAT 1 cut(s) 49
BseDI CCNNGG 4 cut(s) 6, 655, 656, 896
BseGI GGATG 8 cut(s) 80, 280, 328, 356, 500, 756, 935, 1014
BseJI GATNNNNATC 1 cut(s) 1013
BseLI CCNNNNNNNGG 4 cut(s) 250, 661, 662, 911
BseMII CTCAG 2 cut(s) 261, 1040
BseNI ACTGG 4 cut(s) 716, 804, 907, 1059
BseRI GAGGAG 2 cut(s) 667, 1168
BseXI GCAGC 9 cut(s) 4, 198, 382, 475, 538, 588, 1108, 1132, 1197
BseYI CCCAGC 1 cut(s) 860
BsgI GTGCAG 1 cut(s) 1196
BshFI GGCC 6 cut(s) 480, 661, 724, 865, 904, 1229
BshNI GGYRCC 1 cut(s) 80
BshVI ATCGAT 1 cut(s) 49
BsiHKAI GWGCWC 2 cut(s) 462, 674
BsiHKCI CYCGRG 1 cut(s) 655
BsiSI CCGG 6 cut(s) 306, 447, 656, 662, 1018, 1160
BslFI GGGAC 4 cut(s) 353, 429, 443, 716
BslI CCNNNNNNNGG 4 cut(s) 250, 661, 662, 911
BsmAI GTCTC 1 cut(s) 1045
BsmFI GGGAC 4 cut(s) 353, 429, 443, 716
BsnI GGCC 6 cut(s) 480, 661, 724, 865, 904, 1229
BsoBI CYCGRG 1 cut(s) 655
Bsp119I TTCGAA 1 cut(s) 614
Bsp1286I GDGCHC 2 cut(s) 462, 674
Bsp143I GATC 6 cut(s) 103, 229, 259, 463, 889, 1195
Bsp19I CCATGG 1 cut(s) 6
BspACI CCGC 5 cut(s) 78, 251, 372, 594, 824
BspANI GGCC 6 cut(s) 480, 661, 724, 865, 904, 1229
BspCNI CTCAG 2 cut(s) 262, 1041
BspDI ATCGAT 1 cut(s) 49
BspLI GGNNCC 7 cut(s) 12, 82, 376, 445, 660, 805, 905
BspPI GGATC 2 cut(s) 254, 884
BspT104I TTCGAA 1 cut(s) 614
BspT107I GGYRCC 1 cut(s) 80
BspTI CTTAAG 1 cut(s) 424
BsrFI RCCGGY 2 cut(s) 305, 1159
BsrI ACTGG 4 cut(s) 716, 804, 907, 1059
BssAI RCCGGY 2 cut(s) 305, 1159
BssECI CCNNGG 4 cut(s) 6, 655, 656, 896
BssMI GATC 6 cut(s) 103, 229, 259, 463, 889, 1195
BssSI CACGAG 1 cut(s) 701
BssT1I CCWWGG 1 cut(s) 6
Bst2BI CACGAG 1 cut(s) 701
Bst2UI CCWGG 2 cut(s) 477, 898
Bst4CI ACNGT 6 cut(s) 62, 212, 293, 403, 730, 960
Bst6I CTCTTC 1 cut(s) 769
BstAFI CTTAAG 1 cut(s) 424
BstBI TTCGAA 1 cut(s) 614
BstDEI CTNAG 5 cut(s) 270, 871, 989, 1049, 1148
BstDSI CCRYGG 1 cut(s) 6
BstF5I GGATG 8 cut(s) 80, 280, 328, 356, 500, 756, 935, 1014
BstKTI GATC 6 cut(s) 106, 232, 262, 466, 892, 1198
BstMAI GTCTC 1 cut(s) 1045
BstMBI GATC 6 cut(s) 103, 229, 259, 463, 889, 1195
BstMWI GCNNNNNNNGC 2 cut(s) 721, 1226
BstNI CCWGG 2 cut(s) 477, 898
BstNSI RCATGY 2 cut(s) 1086, 1127
BstSCI CCNGG 6 cut(s) 445, 475, 654, 655, 661, 896
BstSFI CTRYAG 1 cut(s) 366
BstV1I GCAGC 9 cut(s) 4, 198, 382, 475, 538, 588, 1108, 1132, 1197
Bsu15I ATCGAT 1 cut(s) 49
BsuRI GGCC 6 cut(s) 480, 661, 724, 865, 904, 1229
BsuTUI ATCGAT 1 cut(s) 49
BtgI CCRYGG 1 cut(s) 6
BtsCI GGATG 8 cut(s) 80, 280, 328, 356, 500, 756, 935, 1014
BtsIMutI CAGTG 3 cut(s) 67, 298, 1191
CaiI CAGNNNCTG 1 cut(s) 1193
Cfr10I RCCGGY 2 cut(s) 305, 1159
Cfr13I GGNCC 4 cut(s) 443, 659, 863, 903
Cfr9I CCCGGG 1 cut(s) 655
ClaI ATCGAT 1 cut(s) 49
CseI GACGC 1 cut(s) 494
Csp6I GTAC 1 cut(s) 126
CviAII CATG 6 cut(s) 7, 850, 1083, 1124, 1199, 1204
CviQI GTAC 1 cut(s) 126
DdeI CTNAG 5 cut(s) 270, 871, 989, 1049, 1148
DpnI GATC 6 cut(s) 105, 231, 261, 465, 891, 1197
DpnII GATC 6 cut(s) 103, 229, 259, 463, 889, 1195
EaeI YGGCCR 1 cut(s) 478
Eam1104I CTCTTC 1 cut(s) 769
EarI CTCTTC 1 cut(s) 769
Ecl136II GAGCTC 1 cut(s) 460
Eco130I CCWWGG 1 cut(s) 6
Eco24I GRGCYC 1 cut(s) 462
Eco32I GATATC 1 cut(s) 53
Eco47I GGWCC 1 cut(s) 443
Eco53kI GAGCTC 1 cut(s) 460
Eco88I CYCGRG 1 cut(s) 655
EcoICRI GAGCTC 1 cut(s) 460
EcoO109I RGGNCCY 1 cut(s) 903
EcoRII CCWGG 2 cut(s) 475, 896
EcoRV GATATC 1 cut(s) 53
EcoT14I CCWWGG 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 462
ErhI CCWWGG 1 cut(s) 6
FaeI CATG 6 cut(s) 10, 853, 1086, 1127, 1202, 1207
FalI AAGNNNNNCTT 2 cut(s) 339, 371
FaqI GGGAC 4 cut(s) 353, 429, 443, 716
FatI CATG 6 cut(s) 6, 849, 1082, 1123, 1198, 1203
FauNDI CATATG 2 cut(s) 537, 1139
FbaI TGATCA 2 cut(s) 229, 1195
FblI GTMKAC 1 cut(s) 405
FokI GGATG 8 cut(s) 87, 287, 335, 363, 487, 763, 922, 1021
FriOI GRGCYC 1 cut(s) 462
FspBI CTAG 3 cut(s) 132, 597, 1221
GsaI CCCAGC 1 cut(s) 864
GsuI CTGGAG 2 cut(s) 312, 546
HaeIII GGCC 6 cut(s) 480, 661, 724, 865, 904, 1229
HapII CCGG 6 cut(s) 306, 447, 656, 662, 1018, 1160
HgaI GACGC 1 cut(s) 494
Hin1II CATG 6 cut(s) 10, 853, 1086, 1127, 1202, 1207
HincII GTYRAC 1 cut(s) 1042
HindII GTYRAC 1 cut(s) 1042
HindIII AAGCTT 1 cut(s) 868
HinfI GANTC 7 cut(s) 224, 278, 943, 993, 1064, 1144, 1175
HpaI GTTAAC 1 cut(s) 1042
HpaII CCGG 6 cut(s) 306, 447, 656, 662, 1018, 1160
HphI GGTGA 2 cut(s) 233, 689
Hpy166II GTNNAC 3 cut(s) 298, 406, 1042
Hpy188I TCNGA 4 cut(s) 108, 229, 881, 1069
Hpy188III TCNNGA 7 cut(s) 282, 329, 563, 845, 947, 1111, 1172
Hpy8I GTNNAC 3 cut(s) 298, 406, 1042
HpyAV CCTTC 3 cut(s) 140, 341, 999
HpyCH4III ACNGT 6 cut(s) 62, 212, 293, 403, 730, 960
HpyCH4IV ACGT 1 cut(s) 1115
HpyCH4V TGCA 5 cut(s) 398, 526, 604, 1120, 1213
HpyF10VI GCNNNNNNNGC 2 cut(s) 721, 1226
HpyF3I CTNAG 5 cut(s) 270, 871, 989, 1049, 1148
HpySE526I ACGT 1 cut(s) 1115
Hsp92II CATG 6 cut(s) 10, 853, 1086, 1127, 1202, 1207
Ksp22I TGATCA 2 cut(s) 229, 1195
KspAI GTTAAC 1 cut(s) 1042
Kzo9I GATC 6 cut(s) 103, 229, 259, 463, 889, 1195
LmnI GCTCC 3 cut(s) 331, 380, 933
Lsp1109I GCAGC 9 cut(s) 4, 198, 382, 475, 538, 588, 1108, 1132, 1197
LweI GCATC 4 cut(s) 65, 313, 538, 944
MaeI CTAG 3 cut(s) 132, 597, 1221
MaeII ACGT 1 cut(s) 1115
MaeIII GTNAC 1 cut(s) 217
MalI GATC 6 cut(s) 105, 231, 261, 465, 891, 1197
MboI GATC 6 cut(s) 103, 229, 259, 463, 889, 1195
MfeI CAATTG 1 cut(s) 359
MhlI GDGCHC 2 cut(s) 462, 674
MlsI TGGCCA 1 cut(s) 480
MluCI AATT 6 cut(s) 85, 160, 359, 605, 616, 716
MluNI TGGCCA 1 cut(s) 480
MlyI GAGTC 3 cut(s) 287, 1153, 1169
MmeI TCCRAC 1 cut(s) 402
Mox20I TGGCCA 1 cut(s) 480
MscI TGGCCA 1 cut(s) 480
MseI TTAA 3 cut(s) 207, 425, 1041
Msp20I TGGCCA 1 cut(s) 480
MspA1I CMGCKG 1 cut(s) 395
MspCI CTTAAG 1 cut(s) 424
MspI CCGG 6 cut(s) 306, 447, 656, 662, 1018, 1160
MspR9I CCNGG 6 cut(s) 447, 477, 656, 657, 663, 898
MunI CAATTG 1 cut(s) 359
MvaI CCWGG 2 cut(s) 477, 898
MwoI GCNNNNNNNGC 2 cut(s) 721, 1226
NciI CCSGG 4 cut(s) 447, 656, 657, 663
NcoI CCATGG 1 cut(s) 6
NdeI CATATG 2 cut(s) 537, 1139
NdeII GATC 6 cut(s) 103, 229, 259, 463, 889, 1195
NlaIII CATG 6 cut(s) 10, 853, 1086, 1127, 1202, 1207
NlaIV GGNNCC 7 cut(s) 12, 82, 376, 445, 660, 805, 905
NspI RCATGY 2 cut(s) 1086, 1127
NspV TTCGAA 1 cut(s) 614
PciI ACATGT 1 cut(s) 1082
PfeI GAWTC 4 cut(s) 224, 943, 993, 1064
PleI GAGTC 3 cut(s) 286, 1152, 1169
PpsI GAGTC 3 cut(s) 286, 1152, 1169
PscI ACATGT 1 cut(s) 1082
Psp124BI GAGCTC 1 cut(s) 462
Psp6I CCWGG 2 cut(s) 475, 896
PspFI CCCAGC 1 cut(s) 860
PspGI CCWGG 2 cut(s) 475, 896
PspN4I GGNNCC 7 cut(s) 12, 82, 376, 445, 660, 805, 905
PspPI GGNCC 4 cut(s) 443, 659, 863, 903
PstNI CAGNNNCTG 1 cut(s) 1193
PvuII CAGCTG 1 cut(s) 395
RsaI GTAC 1 cut(s) 127
RsaNI GTAC 1 cut(s) 126
SacI GAGCTC 1 cut(s) 462
SaqAI TTAA 3 cut(s) 207, 425, 1041
Sau3AI GATC 6 cut(s) 103, 229, 259, 463, 889, 1195
Sau96I GGNCC 4 cut(s) 443, 659, 863, 903
ScaI AGTACT 1 cut(s) 127
SchI GAGTC 3 cut(s) 287, 1153, 1169
ScrFI CCNGG 6 cut(s) 447, 477, 656, 657, 663, 898
SduI GDGCHC 2 cut(s) 462, 674
SfaNI GCATC 4 cut(s) 65, 313, 538, 944
SfcI CTRYAG 1 cut(s) 366
SfuI TTCGAA 1 cut(s) 614
SinI GGWCC 1 cut(s) 443
SmaI CCCGGG 1 cut(s) 657
SmlI CTYRAG 1 cut(s) 424
SmoI CTYRAG 1 cut(s) 424
SpeI ACTAGT 1 cut(s) 131
Sse9I AATT 6 cut(s) 85, 160, 359, 605, 616, 716
SsiI CCGC 5 cut(s) 78, 251, 372, 594, 824
SspI AATATT 1 cut(s) 205
SspMI CTAG 3 cut(s) 132, 597, 1221
SstI GAGCTC 1 cut(s) 462
StyD4I CCNGG 6 cut(s) 445, 475, 654, 655, 661, 896
StyI CCWWGG 1 cut(s) 6
TaaI ACNGT 6 cut(s) 62, 212, 293, 403, 730, 960
TaiI ACGT 1 cut(s) 1118
TaqI TCGA 5 cut(s) 49, 281, 462, 614, 683
TaqII GACCGA 1 cut(s) 104
TasI AATT 6 cut(s) 85, 160, 359, 605, 616, 716
TatI WGTACW 1 cut(s) 125
TauI GCSGC 2 cut(s) 254, 375
TfiI GAWTC 4 cut(s) 224, 943, 993, 1064
Tru1I TTAA 3 cut(s) 207, 425, 1041
Tru9I TTAA 3 cut(s) 207, 425, 1041
TscAI CASTG 3 cut(s) 67, 298, 1198
TseI GCWGC 9 cut(s) 17, 186, 395, 488, 526, 601, 1096, 1120, 1210
TspDTI ATGAA 5 cut(s) 227, 486, 599, 818, 866
TspGWI ACGGA 2 cut(s) 236, 560
TspMI CCCGGG 1 cut(s) 655
TspRI CASTG 3 cut(s) 67, 298, 1198
Vha464I CTTAAG 1 cut(s) 424
VpaK11BI GGWCC 1 cut(s) 443
XapI RAATTY 1 cut(s) 616
XceI RCATGY 2 cut(s) 1086, 1127
XmaI CCCGGG 1 cut(s) 655
XmiI GTMKAC 1 cut(s) 405
XspI CTAG 3 cut(s) 132, 597, 1221
ZrmI AGTACT 1 cut(s) 127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.