Prupe.1G242500_v2.0.a1

Serine threonine-protein kinase AFC2-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
25637036 .. 25641064
4029 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G242500.1

Sequence Viewer

Length: 1299 bp
ATGGAGATGGATTATGTGACGGAGTTCCCTCTTTCCCACATTGATCGGCGTCCAAGGAAGAGGCCCAGGATTGCTTGGGACGTCCCTCAAGGCCACCCAAAGGCTCAGTCAGGAATATATTATGAGCAAGATGTTGGAAATGGGACAAGCTTTGGACCTCCAAGGGTACTCCCAGACCATCCTAGTCTTTTTGTAAAGGGATTGACTCAAAAAGGCTCTCCCCCATGGCGAGATGATGACAAAGATGGGCATTACATGTTTGCGCTGGGAGAGAATTTAACTTCTCGCTATAAGATTCACAGAAAAATTGGTGAAGGAACTTTTGGTCAGGTTTTGGAATGCTGGGATAGGGAAACAAAAGAGGTGGTAGCTATAAAAGTTGTCAGAAGTATTAAGAAATATCGTGAAGCAGCAATGATAGAAGTTGATGTGCTACAGTTGCTTGGGAAGTATGACAGAAATGGCAGTCGTTGTGTTCAAATACGGAACTGGTTTGACTATCGTAACCATATATGTATAGTATTTGAGATGCTTGGACCAAGCTTATACGATTTCCTCCGGAAAAATAATTATCGCCCATTTCCGGTTGATCTTGTCCGCGAGCTTGGCAGGCAACTGTTGGAATGTGTAGCATTCATGCATGATATGCGTCTCATCCATACTGACTTGAAGCCTGAAAACATACTTTTTGTGTCTTCAGAGTATGTTAAAGTACCAGACTACAAGTTTACATCCCGGTCACCAAAAGATGGAACCTGTCATAAAAGGTTGCCAAAGTCTAGTGCTATCAAGGTCATTGATTTTGGTAGCACTGCCTATGACCATCAAGAGCACAACTACATTGTCTCGACAAGGCACTACCGCGCACCAGAGGTTATTCTTGGTCTTGGATGGAGTTATCCATGTGACATATGGAGTGTTGGTTGCATCTTGGTAGAATTGTGTTCGGGAGAAGCTTTGTTTCAGACACATGAGAACTTAGAACATCTAGCTATGATGGAGAGGGTCTTAGGTCCATTTCCACCGCACATGTTGAGAAGAGCAGACCGGCACGCTGAGAAGTATGTCAGGAGGGGTAGATTGGACTGGCCAGAAGGTGCAACTTCACGGGAAAGTATTAAAGCCGTTTTAAAGCTACATCGTCTCCAGAATATAGTTATGCAGCATGTAGATCATTCAGCTGGGGATCTCATCGACCTCCTGCAAGGTCTCCTTAGATATGACCCCTCCAATAGGCTAACAGCTCCTGAGGCCCTTAGGCATCCGTTCTTTACCAGGGATCATTTCAGGAGGTTTTAG

Protein Analysis

433

Amino Acids

50.35

Weight (kDa)

8.94

Isoelectric Point (pI)

50.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 84
AccB7I CCANNNNNTGG 1 cut(s) 749
AccII CGCG 2 cut(s) 600, 864
AccIII TCCGGA 1 cut(s) 558
AciI CCGC 3 cut(s) 598, 862, 1025
AclWI GGATC 2 cut(s) 1194, 1287
AcoI YGGCCR 1 cut(s) 1088
AcsI RAATTY 1 cut(s) 274
AcuI CTGAAG 1 cut(s) 681
AcyI GRCGYC 2 cut(s) 49, 81
AfaI GTAC 2 cut(s) 168, 714
AfiI CCNNNNNNNGG 4 cut(s) 100, 583, 749, 1233
AflIII ACRYGT 2 cut(s) 255, 1029
AgsI TTSAA 2 cut(s) 479, 670
AjnI CCWGG 2 cut(s) 65, 1274
AjuI GAANNNNNNNTTGG 2 cut(s) 306, 338
AluBI AGCT 9 cut(s) 150, 371, 543, 604, 956, 992, 1135, 1181, 1244
AluI AGCT 9 cut(s) 150, 371, 543, 604, 956, 992, 1135, 1181, 1244
Alw21I GWGCWC 1 cut(s) 834
Alw26I GTCTC 4 cut(s) 656, 850, 1148, 1214
AlwI GGATC 2 cut(s) 1194, 1287
AlwNI CAGNNNCTG 1 cut(s) 1247
Aor13HI TCCGGA 1 cut(s) 558
AoxI GGCC 4 cut(s) 62, 91, 1088, 1251
ApeKI GCWGC 2 cut(s) 410, 1162
ApoI RAATTY 1 cut(s) 274
ArsI GACNNNNNNTTYG 2 cut(s) 92, 124
AspLEI GCGC 2 cut(s) 265, 866
AspS9I GGNCC 5 cut(s) 63, 155, 536, 1013, 1252
AsuC2I CCSGG 1 cut(s) 736
AsuHPI GGTGA 2 cut(s) 323, 732
AvaII GGWCC 3 cut(s) 155, 536, 1013
AxyI CCTNAGG 2 cut(s) 1248, 1256
BalI TGGCCA 1 cut(s) 1090
BbsI GAAGAC 1 cut(s) 687
Bbv12I GWGCWC 1 cut(s) 834
BbvI GCAGC 2 cut(s) 422, 1174
BccI CCATC 6 cut(s) 186, 239, 743, 831, 885, 991
BceAI ACGGC 1 cut(s) 1109
BciT130I CCWGG 2 cut(s) 67, 1276
BcnI CCSGG 1 cut(s) 736
BcoDI GTCTC 4 cut(s) 656, 850, 1148, 1214
BfaI CTAG 3 cut(s) 183, 780, 989
BfmI CTRYAG 1 cut(s) 434
BisI GCNGC 2 cut(s) 411, 1163
BlsI GCNGC 2 cut(s) 412, 1164
Bme1390I CCNGG 3 cut(s) 67, 736, 1276
Bme18I GGWCC 3 cut(s) 155, 536, 1013
BmgT120I GGNCC 5 cut(s) 63, 155, 536, 1013, 1252
BmiI GGNNCC 1 cut(s) 754
BmrFI CCNGG 3 cut(s) 67, 736, 1276
BmsI GCATC 3 cut(s) 519, 936, 1270
BpiI GAAGAC 1 cut(s) 687
BpmI CTGGAG 1 cut(s) 1130
BpuEI CTTGAG 1 cut(s) 72
BpuMI CCSGG 1 cut(s) 736
BsaHI GRCGYC 2 cut(s) 49, 81
BsaI GGTCTC 1 cut(s) 1214
BsaJI CCNNGG 5 cut(s) 53, 65, 161, 224, 1275
BsaWI WCCGGW 2 cut(s) 558, 583
BsaXI ACNNNNNCTCC 4 cut(s) 907, 937, 1128, 1158
Bsc4I CCNNNNNNNGG 4 cut(s) 100, 583, 749, 1233
Bse118I RCCGGY 1 cut(s) 1047
Bse1I ACTGG 2 cut(s) 494, 1091
Bse21I CCTNAGG 2 cut(s) 1248, 1256
Bse3DI GCAATG 1 cut(s) 420
BseAI TCCGGA 1 cut(s) 558
BseBI CCWGG 2 cut(s) 67, 1276
BseDI CCNNGG 5 cut(s) 53, 65, 161, 224, 1275
BseGI GGATG 5 cut(s) 178, 654, 731, 896, 1261
BseLI CCNNNNNNNGG 4 cut(s) 100, 583, 749, 1233
BseMI GCAATG 1 cut(s) 420
BseMII CTCAG 3 cut(s) 119, 1047, 1239
BseNI ACTGG 2 cut(s) 494, 1091
BseXI GCAGC 2 cut(s) 422, 1174
BseYI CCCAGC 3 cut(s) 265, 342, 1181
Bsh1236I CGCG 2 cut(s) 600, 864
BshFI GGCC 4 cut(s) 64, 93, 1090, 1253
BsiHKAI GWGCWC 1 cut(s) 834
BsiSI CCGG 4 cut(s) 559, 584, 736, 1048
BslFI GGGAC 3 cut(s) 68, 92, 157
BslI CCNNNNNNNGG 4 cut(s) 100, 583, 749, 1233
BsmAI GTCTC 4 cut(s) 656, 850, 1148, 1214
BsmBI CGTCTC 2 cut(s) 656, 1148
BsmFI GGGAC 3 cut(s) 68, 92, 157
BsmI GAATGC 2 cut(s) 344, 632
BsnI GGCC 4 cut(s) 64, 93, 1090, 1253
Bso31I GGTCTC 1 cut(s) 1214
Bsp1286I GDGCHC 1 cut(s) 834
Bsp13I TCCGGA 1 cut(s) 558
Bsp143I GATC 5 cut(s) 43, 589, 1171, 1186, 1279
Bsp19I CCATGG 1 cut(s) 224
BspACI CCGC 3 cut(s) 598, 862, 1025
BspANI GGCC 4 cut(s) 64, 93, 1090, 1253
BspCNI CTCAG 3 cut(s) 118, 1048, 1240
BspEI TCCGGA 1 cut(s) 558
BspFNI CGCG 2 cut(s) 600, 864
BspLI GGNNCC 1 cut(s) 754
BspPI GGATC 2 cut(s) 1194, 1287
BspQI GCTCTTC 1 cut(s) 1033
BspTNI GGTCTC 1 cut(s) 1214
BsrDI GCAATG 1 cut(s) 420
BsrFI RCCGGY 1 cut(s) 1047
BsrI ACTGG 2 cut(s) 494, 1091
BssAI RCCGGY 1 cut(s) 1047
BssECI CCNNGG 5 cut(s) 53, 65, 161, 224, 1275
BssMI GATC 5 cut(s) 43, 589, 1171, 1186, 1279
BssNI GRCGYC 2 cut(s) 49, 81
BssT1I CCWWGG 3 cut(s) 53, 161, 224
Bst2UI CCWGG 2 cut(s) 67, 1276
Bst4CI ACNGT 2 cut(s) 438, 618
Bst6I CTCTTC 2 cut(s) 53, 1033
BstACI GRCGYC 2 cut(s) 49, 81
BstAPI GCANNNNNTGC 1 cut(s) 646
BstC8I GCNNGC 3 cut(s) 602, 611, 1053
BstDEI CTNAG 7 cut(s) 105, 979, 1009, 1056, 1214, 1248, 1256
BstDSI CCRYGG 1 cut(s) 224
BstEII GGTNACC 1 cut(s) 738
BstENI CCTNNNNNAGG 1 cut(s) 1231
BstF5I GGATG 5 cut(s) 178, 654, 731, 896, 1261
BstFNI CGCG 2 cut(s) 600, 864
BstHHI GCGC 2 cut(s) 265, 866
BstKTI GATC 5 cut(s) 46, 592, 1174, 1189, 1282
BstMAI GTCTC 4 cut(s) 656, 850, 1148, 1214
BstMBI GATC 5 cut(s) 43, 589, 1171, 1186, 1279
BstMWI GCNNNNNNNGC 5 cut(s) 439, 606, 610, 646, 1250
BstNI CCWGG 2 cut(s) 67, 1276
BstNSI RCATGY 3 cut(s) 259, 1033, 1169
BstPI GGTNACC 1 cut(s) 738
BstSCI CCNGG 3 cut(s) 65, 734, 1274
BstSFI CTRYAG 1 cut(s) 434
BstUI CGCG 2 cut(s) 600, 864
BstV1I GCAGC 2 cut(s) 422, 1174
BstV2I GAAGAC 1 cut(s) 687
BstX2I RGATCY 1 cut(s) 1186
BstYI RGATCY 1 cut(s) 1186
Bsu36I CCTNAGG 2 cut(s) 1248, 1256
BsuRI GGCC 4 cut(s) 64, 93, 1090, 1253
BtgI CCRYGG 1 cut(s) 224
BtsCI GGATG 5 cut(s) 178, 654, 731, 896, 1261
BtsI GCAGTG 1 cut(s) 810
BtsIMutI CAGTG 1 cut(s) 810
Cac8I GCNNGC 3 cut(s) 602, 611, 1053
CaiI CAGNNNCTG 1 cut(s) 1247
CfoI GCGC 2 cut(s) 265, 866
Cfr10I RCCGGY 1 cut(s) 1047
Cfr13I GGNCC 5 cut(s) 63, 155, 536, 1013, 1252
CseI GACGC 2 cut(s) 38, 638
Csp6I GTAC 2 cut(s) 167, 713
CspCI CAANNNNNGTGG 2 cut(s) 345, 380
CviAII CATG 8 cut(s) 225, 256, 637, 641, 903, 971, 1030, 1166
CviQI GTAC 2 cut(s) 167, 713
DdeI CTNAG 7 cut(s) 105, 979, 1009, 1056, 1214, 1248, 1256
DpnI GATC 5 cut(s) 45, 591, 1173, 1188, 1281
DpnII GATC 5 cut(s) 43, 589, 1171, 1186, 1279
DraI TTTAAA 1 cut(s) 1131
EaeI YGGCCR 1 cut(s) 1088
Eam1104I CTCTTC 2 cut(s) 53, 1033
EarI CTCTTC 2 cut(s) 53, 1033
Eco130I CCWWGG 3 cut(s) 53, 161, 224
Eco31I GGTCTC 1 cut(s) 1214
Eco47I GGWCC 3 cut(s) 155, 536, 1013
Eco57I CTGAAG 1 cut(s) 681
Eco81I CCTNAGG 2 cut(s) 1248, 1256
Eco91I GGTNACC 1 cut(s) 738
EcoNI CCTNNNNNAGG 1 cut(s) 1231
EcoO109I RGGNCCY 1 cut(s) 1252
EcoO65I GGTNACC 1 cut(s) 738
EcoRII CCWGG 2 cut(s) 65, 1274
EcoT14I CCWWGG 3 cut(s) 53, 161, 224
EcoT22I ATGCAT 1 cut(s) 642
ErhI CCWWGG 3 cut(s) 53, 161, 224
Esp3I CGTCTC 2 cut(s) 656, 1148
FaeI CATG 8 cut(s) 228, 259, 640, 644, 906, 974, 1033, 1169
FalI AAGNNNNNCTT 2 cut(s) 1197, 1229
FaqI GGGAC 3 cut(s) 68, 92, 157
FatI CATG 8 cut(s) 224, 255, 636, 640, 902, 970, 1029, 1165
FauNDI CATATG 1 cut(s) 911
Fnu4HI GCNGC 2 cut(s) 411, 1163
FokI GGATG 5 cut(s) 165, 641, 718, 903, 1248
Fsp4HI GCNGC 2 cut(s) 411, 1163
FspBI CTAG 3 cut(s) 183, 780, 989
GlaI GCGC 2 cut(s) 264, 865
GluI GCNGC 2 cut(s) 411, 1163
GsaI CCCAGC 3 cut(s) 269, 346, 1185
GsuI CTGGAG 1 cut(s) 1130
HaeIII GGCC 4 cut(s) 64, 93, 1090, 1253
HapII CCGG 4 cut(s) 559, 584, 736, 1048
HgaI GACGC 2 cut(s) 38, 638
HhaI GCGC 2 cut(s) 265, 866
Hin1I GRCGYC 2 cut(s) 49, 81
Hin1II CATG 8 cut(s) 228, 259, 640, 644, 906, 974, 1033, 1169
Hin6I GCGC 2 cut(s) 263, 864
HinP1I GCGC 2 cut(s) 263, 864
HindIII AAGCTT 3 cut(s) 148, 541, 954
HinfI GANTC 2 cut(s) 205, 295
HpaII CCGG 4 cut(s) 559, 584, 736, 1048
HphI GGTGA 2 cut(s) 323, 732
Hpy166II GTNNAC 1 cut(s) 729
Hpy188I TCNGA 3 cut(s) 386, 700, 966
Hpy8I GTNNAC 1 cut(s) 729
HpyAV CCTTC 2 cut(s) 308, 1088
HpyCH4III ACNGT 2 cut(s) 438, 618
HpyCH4IV ACGT 1 cut(s) 81
HpyCH4V TGCA 5 cut(s) 640, 927, 1100, 1162, 1204
HpyF10VI GCNNNNNNNGC 5 cut(s) 439, 606, 610, 646, 1250
HpyF3I CTNAG 7 cut(s) 105, 979, 1009, 1056, 1214, 1248, 1256
HpySE526I ACGT 1 cut(s) 81
Hsp92I GRCGYC 2 cut(s) 49, 81
Hsp92II CATG 8 cut(s) 228, 259, 640, 644, 906, 974, 1033, 1169
HspAI GCGC 2 cut(s) 263, 864
Kpn2I TCCGGA 1 cut(s) 558
Kzo9I GATC 5 cut(s) 43, 589, 1171, 1186, 1279
LguI GCTCTTC 1 cut(s) 1033
LmnI GCTCC 1 cut(s) 1249
Lsp1109I GCAGC 2 cut(s) 422, 1174
LweI GCATC 3 cut(s) 519, 936, 1270
MaeI CTAG 3 cut(s) 183, 780, 989
MaeII ACGT 1 cut(s) 81
MaeIII GTNAC 4 cut(s) 16, 503, 738, 905
MalI GATC 5 cut(s) 45, 591, 1173, 1188, 1281
MboI GATC 5 cut(s) 43, 589, 1171, 1186, 1279
MboII GAAGA 3 cut(s) 70, 687, 1050
MflI RGATCY 1 cut(s) 1186
MhlI GDGCHC 1 cut(s) 834
MlsI TGGCCA 1 cut(s) 1090
MluCI AATT 4 cut(s) 274, 306, 568, 938
MluNI TGGCCA 1 cut(s) 1090
MlyI GAGTC 1 cut(s) 199
MmeI TCCRAC 2 cut(s) 115, 600
Mox20I TGGCCA 1 cut(s) 1090
Mph1103I ATGCAT 1 cut(s) 642
MroI TCCGGA 1 cut(s) 558
MscI TGGCCA 1 cut(s) 1090
MseI TTAA 5 cut(s) 278, 393, 708, 1119, 1130
Msp20I TGGCCA 1 cut(s) 1090
MspA1I CMGCKG 1 cut(s) 1181
MspI CCGG 4 cut(s) 559, 584, 736, 1048
MspR9I CCNGG 3 cut(s) 67, 736, 1276
Mva1269I GAATGC 2 cut(s) 344, 632
MvaI CCWGG 2 cut(s) 67, 1276
MvnI CGCG 2 cut(s) 600, 864
MwoI GCNNNNNNNGC 5 cut(s) 439, 606, 610, 646, 1250
NciI CCSGG 1 cut(s) 736
NcoI CCATGG 1 cut(s) 224
NdeI CATATG 1 cut(s) 911
NdeII GATC 5 cut(s) 43, 589, 1171, 1186, 1279
NlaIII CATG 8 cut(s) 228, 259, 640, 644, 906, 974, 1033, 1169
NlaIV GGNNCC 1 cut(s) 754
NmuCI GTSAC 3 cut(s) 16, 738, 905
NsiI ATGCAT 1 cut(s) 642
NspI RCATGY 3 cut(s) 259, 1033, 1169
PciI ACATGT 2 cut(s) 255, 1029
PciSI GCTCTTC 1 cut(s) 1033
PctI GAATGC 2 cut(s) 344, 632
PfeI GAWTC 1 cut(s) 295
PflMI CCANNNNNTGG 1 cut(s) 749
PkrI GCNGC 2 cut(s) 412, 1164
PleI GAGTC 1 cut(s) 199
PpsI GAGTC 1 cut(s) 199
PscI ACATGT 2 cut(s) 255, 1029
Psp6I CCWGG 2 cut(s) 65, 1274
PspEI GGTNACC 1 cut(s) 738
PspFI CCCAGC 3 cut(s) 265, 342, 1181
PspGI CCWGG 2 cut(s) 65, 1274
PspN4I GGNNCC 1 cut(s) 754
PspPI GGNCC 5 cut(s) 63, 155, 536, 1013, 1252
PstNI CAGNNNCTG 1 cut(s) 1247
PsuI RGATCY 1 cut(s) 1186
PvuII CAGCTG 1 cut(s) 1181
RsaI GTAC 2 cut(s) 168, 714
RsaNI GTAC 2 cut(s) 167, 713
SapI GCTCTTC 1 cut(s) 1033
SaqAI TTAA 5 cut(s) 278, 393, 708, 1119, 1130
SatI GCNGC 2 cut(s) 411, 1163
Sau3AI GATC 5 cut(s) 43, 589, 1171, 1186, 1279
Sau96I GGNCC 5 cut(s) 63, 155, 536, 1013, 1252
SchI GAGTC 1 cut(s) 199
ScrFI CCNGG 3 cut(s) 67, 736, 1276
SduI GDGCHC 1 cut(s) 834
SfaNI GCATC 3 cut(s) 519, 936, 1270
SfcI CTRYAG 1 cut(s) 434
SinI GGWCC 3 cut(s) 155, 536, 1013
SmlI CTYRAG 1 cut(s) 87
SmoI CTYRAG 1 cut(s) 87
Sse9I AATT 4 cut(s) 274, 306, 568, 938
SsiI CCGC 3 cut(s) 598, 862, 1025
SspMI CTAG 3 cut(s) 183, 780, 989
StyD4I CCNGG 3 cut(s) 65, 734, 1274
StyI CCWWGG 3 cut(s) 53, 161, 224
TaaI ACNGT 2 cut(s) 438, 618
TaiI ACGT 1 cut(s) 84
TaqI TCGA 2 cut(s) 848, 1194
TasI AATT 4 cut(s) 274, 306, 568, 938
TfiI GAWTC 1 cut(s) 295
Tru1I TTAA 5 cut(s) 278, 393, 708, 1119, 1130
Tru9I TTAA 5 cut(s) 278, 393, 708, 1119, 1130
TscAI CASTG 1 cut(s) 817
TseFI GTSAC 3 cut(s) 16, 738, 905
TseI GCWGC 2 cut(s) 410, 1162
Tsp45I GTSAC 3 cut(s) 16, 738, 905
TspDTI ATGAA 1 cut(s) 625
TspGWI ACGGA 3 cut(s) 35, 499, 1254
TspRI CASTG 1 cut(s) 817
Van91I CCANNNNNTGG 1 cut(s) 749
VpaK11BI GGWCC 3 cut(s) 155, 536, 1013
XagI CCTNNNNNAGG 1 cut(s) 1231
XapI RAATTY 1 cut(s) 274
XceI RCATGY 3 cut(s) 259, 1033, 1169
XcmI CCANNNNNNNNNTGG 1 cut(s) 909
XspI CTAG 3 cut(s) 183, 780, 989
ZraI GACGTC 1 cut(s) 82
Zsp2I ATGCAT 1 cut(s) 642
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.