Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0007114

Physical Location & Seq

Genomic Coordinates Forward (+)

37304340 .. 37308180

Gene Structure 3841 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G438400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 987 bp

ATGGCTCGGGTAGGAGAATGGGGATTTAAAGGTAGAGCGAAATGGGGCTGTTCGTACAAGAAGACCACTCTCATCGTTTGCTCCATTAACATTGTTGTTGCTCTATATGTTCTTCGTTCTCTCTACGCTTCTCTGTACATCTACTCCGATAGAGATTCACGTCCCACTCTTGAGTACACTCCAGATCAGATTAGGAAAATGGAGGAATCAGTTCGGATTCGAAAAGCAGCTGAACCGGTTGAGCTCATTAGATTGGTAAAGGCACTAAAGAAGGAGCTTTCCAGAGAGGTAGCGGTTGAATTGCCACAGTCTTTGAAGCTGAAGATAACCAATGAGATAGTTGAGAGGTTGAAAACCTTGAGGCCCAAAGCAAATGTTACTGAGCAGAGAGAATTTGTCGAAAGATGGTGCAAGGAAAAACTGAAGGAAGCTAAGCAGTTGGCTCTTGAGACAAACGCTTCAAATTCAACAATTCTTCATGAGGAAGCAGAAATGCTAGTAAAAGCTTTGGAGTCTAATTGGACAGTGCTGTTGGAAGACATGGGCCTTTGGATACCTGCTGAAATTGTTAACACAGAACATCATGATAAACCTGAGGGTGAAGAGGAGGAGTTAGATCAAATTTTGCCGGGAAGGCCGCTTCCACCTGAATGCCATGCGGAAGTTCATACAGATTATGATGGTGCTGCTGTAAGATGGGGGCTTAACCACCACAAAGATAGTGCAGCTGACTGTTGTCAGGCTTGCCTGGATCAAGCTAAACGTGCTAAGCCTAACGAAAAGAGATGTAATATATGGGTATACTGCCCGTCTGAAGGCGGTTGCCATTCTCCAGATATCTATGAGCATAAACTTGGAGAGTGCTGGCTGAAATACGCAGAAACGCCCAAACGCAATTTTAAGGACAAGTATCCTGAATCATACAGAAACAACCATCCATCTGCACCACTTGTTGTTCCTTGGGCCTCTGGCATTGTTGGTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PAN_4

Protein Analysis

329

Amino Acids

37.55

Weight (kDa)

6.58

Isoelectric Point (pI)

48.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33380 AT4G33380
fragaria_vesca	FvH4_2g34620 FvH4_2g34620
malus_domestica	MD08G1103400.v1.1 MD15G1084700.v1.1
prunus_persica	Prupe.1G438400_v2.0.a1
pyrus_communis	pycom08g08480 pycom15g08010
rosa_chinensis	RchiOBHm_Chr6g0258511 RchiOBHm_Chr6g0307521 RchiOBHm_Chr6g0307681
rosa_laevigata	RLG00000010709 RLG00000033547
rosa_multiflora	Rmu_sc0000031.1_g000023 Rmu_sc0001643.1_g000002
rosa_roxburghii	Rroxscaffold_6G00423340
rosa_rugosa	Rorug06G0359300 Rorug06G0359400.1
rosa_samantha	Rh2DG359800 Rh6AG468900 Rh6BG479500 Rh6CG485000 Rh6DG471700
rosa_wichuraiana	Rw6G040940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	565
AccI	GTMKAC	1 cut(s)	801
AciI	CCGC	4 cut(s)	293, 638, 659, 819
AclWI	GGATC	1 cut(s)	759
AcsI	RAATTY	3 cut(s)	392, 463, 621
AcuI	CTGAAG	3 cut(s)	341, 443, 834
AfaI	GTAC	3 cut(s)	56, 137, 176
AfiI	CCNNNNNNNGG	1 cut(s)	815
AgeI	ACCGGT	1 cut(s)	235
AgsI	TTSAA	5 cut(s)	299, 316, 352, 462, 468
AjiI	CACGTC	1 cut(s)	161
AjnI	CCWGG	1 cut(s)	747
AluBI	AGCT	8 cut(s)	230, 244, 277, 319, 431, 506, 728, 758
AluI	AGCT	8 cut(s)	230, 244, 277, 319, 431, 506, 728, 758
Alw21I	GWGCWC	1 cut(s)	246
Alw26I	GTCTC	1 cut(s)	443
AlwI	GGATC	1 cut(s)	759
Ama87I	CYCGRG	1 cut(s)	6
AoxI	GGCC	4 cut(s)	362, 544, 635, 963
ApeKI	GCWGC	3 cut(s)	227, 686, 725
ApoI	RAATTY	3 cut(s)	392, 463, 621
AsiGI	ACCGGT	1 cut(s)	235
Asp700I	GAANNNNTTC	1 cut(s)	210
AspS9I	GGNCC	3 cut(s)	363, 544, 963
AsuC2I	CCSGG	1 cut(s)	630
AsuHPI	GGTGA	1 cut(s)	611
AsuII	TTCGAA	1 cut(s)	220
AvaI	CYCGRG	1 cut(s)	6
AxyI	CCTNAGG	1 cut(s)	594
BanII	GRGCYC	1 cut(s)	246
BbsI	GAAGAC	2 cut(s)	68, 543
Bbv12I	GWGCWC	1 cut(s)	246
BbvI	GCAGC	3 cut(s)	239, 673, 737
BccI	CCATC	5 cut(s)	399, 674, 690, 942, 946
BciT130I	CCWGG	1 cut(s)	749
BciVI	GTATCC	2 cut(s)	546, 921
BcnI	CCSGG	1 cut(s)	630
BcoDI	GTCTC	1 cut(s)	443
BfaI	CTAG	1 cut(s)	497
BfuAI	ACCTGC	1 cut(s)	565
BfuI	GTATCC	2 cut(s)	546, 921
BglI	GCCNNNNNGGC	1 cut(s)	634
BisI	GCNGC	4 cut(s)	228, 638, 687, 726
BlpI	GCTNAGC	2 cut(s)	432, 768
BlsI	GCNGC	4 cut(s)	229, 639, 688, 727
Bme1390I	CCNGG	2 cut(s)	630, 749
BmeT110I	CYCGRG	1 cut(s)	6
BmgBI	CACGTC	1 cut(s)	161
BmgT120I	GGNCC	3 cut(s)	363, 544, 963
BmrFI	CCNGG	2 cut(s)	630, 749
BoxI	GACNNNNGTC	1 cut(s)	735
BpiI	GAAGAC	2 cut(s)	68, 543
BpmI	CTGGAG	2 cut(s)	165, 816
Bpu1102I	GCTNAGC	2 cut(s)	432, 768
Bpu14I	TTCGAA	1 cut(s)	220
BpuEI	CTTGAG	3 cut(s)	191, 379, 467
BpuMI	CCSGG	1 cut(s)	630
BsaJI	CCNNGG	1 cut(s)	959
BsaWI	WCCGGW	1 cut(s)	235
BsaXI	ACNNNNNCTCC	2 cut(s)	128, 158
Bsc4I	CCNNNNNNNGG	1 cut(s)	815
Bse118I	RCCGGY	1 cut(s)	235
Bse21I	CCTNAGG	1 cut(s)	594
BseBI	CCWGG	1 cut(s)	749
BseDI	CCNNGG	1 cut(s)	959
BseGI	GGATG	1 cut(s)	934
BseLI	CCNNNNNNNGG	1 cut(s)	815
BseMII	CTCAG	2 cut(s)	372, 585
BseRI	GAGGAG	2 cut(s)	620, 623
BseXI	GCAGC	3 cut(s)	239, 673, 737
BsgI	GTGCAG	2 cut(s)	744, 927
BshFI	GGCC	4 cut(s)	364, 546, 637, 965
BshTI	ACCGGT	1 cut(s)	235
BsiHKAI	GWGCWC	1 cut(s)	246
BsiHKCI	CYCGRG	1 cut(s)	6
BsiSI	CCGG	2 cut(s)	236, 629
BslFI	GGGAC	1 cut(s)	147
BslI	CCNNNNNNNGG	1 cut(s)	815
BsmAI	GTCTC	1 cut(s)	443
BsmFI	GGGAC	1 cut(s)	147
BsmI	GAATGC	1 cut(s)	656
BsnI	GGCC	4 cut(s)	364, 546, 637, 965
BsoBI	CYCGRG	1 cut(s)	6
Bsp119I	TTCGAA	1 cut(s)	220
Bsp1286I	GDGCHC	1 cut(s)	246
Bsp1407I	TGTACA	1 cut(s)	135
Bsp143I	GATC	3 cut(s)	184, 616, 751
Bsp1720I	GCTNAGC	2 cut(s)	432, 768
BspACI	CCGC	4 cut(s)	293, 638, 659, 819
BspANI	GGCC	4 cut(s)	364, 546, 637, 965
BspCNI	CTCAG	2 cut(s)	373, 586
BspHI	TCATGA	2 cut(s)	478, 583
BspMI	ACCTGC	1 cut(s)	565
BspPI	GGATC	1 cut(s)	759
BspT104I	TTCGAA	1 cut(s)	220
BsrFI	RCCGGY	1 cut(s)	235
BsrGI	TGTACA	1 cut(s)	135
BssAI	RCCGGY	1 cut(s)	235
BssECI	CCNNGG	1 cut(s)	959
BssMI	GATC	3 cut(s)	184, 616, 751
BssNAI	GTATAC	1 cut(s)	802
BssT1I	CCWWGG	1 cut(s)	959
Bst1107I	GTATAC	1 cut(s)	802
Bst2UI	CCWGG	1 cut(s)	749
Bst4CI	ACNGT	3 cut(s)	309, 526, 734
Bst6I	CTCTTC	1 cut(s)	597
BstAUI	TGTACA	1 cut(s)	135
BstBI	TTCGAA	1 cut(s)	220
BstC8I	GCNNGC	2 cut(s)	745, 866
BstDEI	CTNAG	4 cut(s)	381, 432, 594, 768
BstF5I	GGATG	1 cut(s)	934
BstKTI	GATC	3 cut(s)	187, 619, 754
BstMAI	GTCTC	1 cut(s)	443
BstMBI	GATC	3 cut(s)	184, 616, 751
BstMWI	GCNNNNNNNGC	2 cut(s)	634, 764
BstNI	CCWGG	1 cut(s)	749
BstPAI	GACNNNNGTC	1 cut(s)	735
BstSCI	CCNGG	2 cut(s)	628, 747
BstV1I	GCAGC	3 cut(s)	239, 673, 737
BstV2I	GAAGAC	2 cut(s)	68, 543
BstZ17I	GTATAC	1 cut(s)	802
Bsu36I	CCTNAGG	1 cut(s)	594
BsuI	GTATCC	2 cut(s)	546, 921
BsuRI	GGCC	4 cut(s)	364, 546, 637, 965
BtrI	CACGTC	1 cut(s)	161
BtsCI	GGATG	1 cut(s)	934
BtsIMutI	CAGTG	1 cut(s)	531
BveI	ACCTGC	1 cut(s)	565
Cac8I	GCNNGC	2 cut(s)	745, 866
CciI	TCATGA	2 cut(s)	478, 583
Cfr10I	RCCGGY	1 cut(s)	235
Cfr13I	GGNCC	3 cut(s)	363, 544, 963
Csp6I	GTAC	3 cut(s)	55, 136, 175
CspAI	ACCGGT	1 cut(s)	235
CspCI	CAANNNNNGTGG	2 cut(s)	294, 329
CviAII	CATG	5 cut(s)	479, 541, 584, 656, 984
CviQI	GTAC	3 cut(s)	55, 136, 175
DdeI	CTNAG	4 cut(s)	381, 432, 594, 768
DpnI	GATC	3 cut(s)	186, 618, 753
DpnII	GATC	3 cut(s)	184, 616, 751
DraI	TTTAAA	1 cut(s)	28
Eam1104I	CTCTTC	1 cut(s)	597
EarI	CTCTTC	1 cut(s)	597
Ecl136II	GAGCTC	1 cut(s)	244
Eco130I	CCWWGG	1 cut(s)	959
Eco24I	GRGCYC	1 cut(s)	246
Eco32I	GATATC	1 cut(s)	838
Eco53kI	GAGCTC	1 cut(s)	244
Eco57I	CTGAAG	3 cut(s)	341, 443, 834
Eco81I	CCTNAGG	1 cut(s)	594
Eco88I	CYCGRG	1 cut(s)	6
EcoICRI	GAGCTC	1 cut(s)	244
EcoRII	CCWGG	1 cut(s)	747
EcoRV	GATATC	1 cut(s)	838
EcoT14I	CCWWGG	1 cut(s)	959
EcoT38I	GRGCYC	1 cut(s)	246
ErhI	CCWWGG	1 cut(s)	959
FaeI	CATG	5 cut(s)	482, 544, 587, 659, 987
FaqI	GGGAC	1 cut(s)	147
FatI	CATG	5 cut(s)	478, 540, 583, 655, 983
FblI	GTMKAC	1 cut(s)	801
Fnu4HI	GCNGC	4 cut(s)	228, 638, 687, 726
FokI	GGATG	1 cut(s)	921
FriOI	GRGCYC	1 cut(s)	246
Fsp4HI	GCNGC	4 cut(s)	228, 638, 687, 726
FspBI	CTAG	1 cut(s)	497
GluI	GCNGC	4 cut(s)	228, 638, 687, 726
GsuI	CTGGAG	2 cut(s)	165, 816
HaeIII	GGCC	4 cut(s)	364, 546, 637, 965
HapII	CCGG	2 cut(s)	236, 629
Hin1II	CATG	5 cut(s)	482, 544, 587, 659, 987
HincII	GTYRAC	1 cut(s)	571
HindII	GTYRAC	1 cut(s)	571
HindIII	AAGCTT	1 cut(s)	504
HinfI	GANTC	5 cut(s)	155, 206, 217, 512, 917
HpaI	GTTAAC	1 cut(s)	571
HpaII	CCGG	2 cut(s)	236, 629
HphI	GGTGA	1 cut(s)	611
Hpy166II	GTNNAC	3 cut(s)	177, 571, 802
Hpy188I	TCNGA	4 cut(s)	148, 189, 216, 814
Hpy188III	TCNNGA	8 cut(s)	170, 182, 282, 446, 479, 584, 833, 914
Hpy8I	GTNNAC	3 cut(s)	177, 571, 802
HpyAV	CCTTC	4 cut(s)	265, 418, 627, 809
HpyCH4III	ACNGT	3 cut(s)	309, 526, 734
HpyCH4IV	ACGT	2 cut(s)	160, 763
HpyCH4V	TGCA	4 cut(s)	411, 725, 944, 983
HpyF10VI	GCNNNNNNNGC	2 cut(s)	634, 764
HpyF3I	CTNAG	4 cut(s)	381, 432, 594, 768
HpySE526I	ACGT	2 cut(s)	160, 763
Hsp92II	CATG	5 cut(s)	482, 544, 587, 659, 987
KspAI	GTTAAC	1 cut(s)	571
Kzo9I	GATC	3 cut(s)	184, 616, 751
LmnI	GCTCC	2 cut(s)	86, 274
Lsp1109I	GCAGC	3 cut(s)	239, 673, 737
MaeI	CTAG	1 cut(s)	497
MaeII	ACGT	2 cut(s)	160, 763
MaeIII	GTNAC	1 cut(s)	376
MalI	GATC	3 cut(s)	186, 618, 753
MboI	GATC	3 cut(s)	184, 616, 751
MboII	GAAGA	6 cut(s)	73, 104, 334, 467, 548, 614
MhlI	GDGCHC	1 cut(s)	246
MluCI	AATT	8 cut(s)	299, 392, 463, 471, 517, 564, 621, 895
MlyI	GAGTC	1 cut(s)	521
MmeI	TCCRAC	1 cut(s)	513
MnlI	CCTC	9 cut(s)	196, 280, 339, 354, 475, 589, 598, 601, 976
MroXI	GAANNNNTTC	1 cut(s)	210
MseI	TTAA	5 cut(s)	27, 87, 570, 705, 900
MslI	CAYNNNNRTG	1 cut(s)	649
MspA1I	CMGCKG	2 cut(s)	230, 728
MspI	CCGG	2 cut(s)	236, 629
MspR9I	CCNGG	2 cut(s)	630, 749
Mva1269I	GAATGC	1 cut(s)	656
MvaI	CCWGG	1 cut(s)	749
MwoI	GCNNNNNNNGC	2 cut(s)	634, 764
NciI	CCSGG	1 cut(s)	630
NdeII	GATC	3 cut(s)	184, 616, 751
NlaIII	CATG	5 cut(s)	482, 544, 587, 659, 987
NspV	TTCGAA	1 cut(s)	220
PagI	TCATGA	2 cut(s)	478, 583
PctI	GAATGC	1 cut(s)	656
PdmI	GAANNNNTTC	1 cut(s)	210
PfeI	GAWTC	4 cut(s)	155, 206, 217, 917
PinAI	ACCGGT	1 cut(s)	235
PkrI	GCNGC	4 cut(s)	229, 639, 688, 727
PleI	GAGTC	1 cut(s)	520
PpsI	GAGTC	1 cut(s)	520
PshAI	GACNNNNGTC	1 cut(s)	735
Psp124BI	GAGCTC	1 cut(s)	246
Psp6I	CCWGG	1 cut(s)	747
PspGI	CCWGG	1 cut(s)	747
PspPI	GGNCC	3 cut(s)	363, 544, 963
PvuII	CAGCTG	2 cut(s)	230, 728
RsaI	GTAC	3 cut(s)	56, 137, 176
RsaNI	GTAC	3 cut(s)	55, 136, 175
RseI	CAYNNNNRTG	1 cut(s)	649
SacI	GAGCTC	1 cut(s)	246
SaqAI	TTAA	5 cut(s)	27, 87, 570, 705, 900
SatI	GCNGC	4 cut(s)	228, 638, 687, 726
Sau3AI	GATC	3 cut(s)	184, 616, 751
Sau96I	GGNCC	3 cut(s)	363, 544, 963
SchI	GAGTC	1 cut(s)	521
ScrFI	CCNGG	2 cut(s)	630, 749
SduI	GDGCHC	1 cut(s)	246
SfuI	TTCGAA	1 cut(s)	220
SmiMI	CAYNNNNRTG	1 cut(s)	649
SmlI	CTYRAG	3 cut(s)	170, 358, 446
SmoI	CTYRAG	3 cut(s)	170, 358, 446
Sse9I	AATT	8 cut(s)	299, 392, 463, 471, 517, 564, 621, 895
SsiI	CCGC	4 cut(s)	293, 638, 659, 819
SspMI	CTAG	1 cut(s)	497
SstI	GAGCTC	1 cut(s)	246
StyD4I	CCNGG	2 cut(s)	628, 747
StyI	CCWWGG	1 cut(s)	959
TaaI	ACNGT	3 cut(s)	309, 526, 734
TaiI	ACGT	2 cut(s)	163, 766
TaqI	TCGA	2 cut(s)	220, 399
TasI	AATT	8 cut(s)	299, 392, 463, 471, 517, 564, 621, 895
TatI	WGTACW	2 cut(s)	135, 174
TauI	GCSGC	1 cut(s)	640
TfiI	GAWTC	4 cut(s)	155, 206, 217, 917
Tru1I	TTAA	5 cut(s)	27, 87, 570, 705, 900
Tru9I	TTAA	5 cut(s)	27, 87, 570, 705, 900
TscAI	CASTG	1 cut(s)	531
TseI	GCWGC	3 cut(s)	227, 686, 725
TspDTI	ATGAA	2 cut(s)	467, 656
TspRI	CASTG	1 cut(s)	531
XapI	RAATTY	3 cut(s)	392, 463, 621
XmiI	GTMKAC	1 cut(s)	801
XmnI	GAANNNNTTC	1 cut(s)	210
XspI	CTAG	1 cut(s)	497

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.