Belongs to the GPI family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G24620 AT4G24620 |
| fragaria_vesca | FvH4_5g35680 FvH4_5g35680 |
| malus_domestica | MD08G1194100.v1.1 MD15G1382200.v1.1 |
| prunus_persica | Prupe.1G528400_v2.0.a1 Prupe.1G528400_v2.0.a1 |
| pyrus_communis | pycom15g34220 |
| rosa_chinensis | RchiOBHm_Chr7g0237251 RchiOBHm_Chr7g0237271 RchiOBHm_Chr7g0237281 RchiOBHm_Chr7g0237311 RchiOBHm_Chr7g0237321 |
| rosa_laevigata | RLG00000001012 RLG00000001018 |
| rosa_multiflora | Rmu_sc0002923.1_g000043 Rmu_sc0002923.1_g000049 Rmu_sc0006438.1_g000001 Rmu_sc0006438.1_g000006 Rmu_sc0006438.1_g000007 |
| rosa_roxburghii | Rroxscaffold_3G00224320 |
| rosa_rugosa | Rorug07G0302600 Rorug07G0302700 |
| rosa_samantha | Rh7AG459300 Rh7AG459500 Rh7AG459600 Rh7AG459700 Rh7AG459800 Rh7BG429700 Rh7CG477100 Rh7DG446400 |
| rosa_wichuraiana | Rw0G003870 Rw7G038060 Rw7G038080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 528 |
| AccB1I | GGYRCC | 2 cut(s) | 1019, 1710 |
| AccBSI | CCGCTC | 1 cut(s) | 58 |
| AccI | GTMKAC | 1 cut(s) | 185 |
| AccII | CGCG | 2 cut(s) | 395, 1350 |
| AccIII | TCCGGA | 1 cut(s) | 81 |
| AclWI | GGATC | 7 cut(s) | 224, 237, 510, 680, 1113, 1126, 1284 |
| AcoI | YGGCCR | 5 cut(s) | 132, 189, 204, 427, 1761 |
| AcsI | RAATTY | 1 cut(s) | 832 |
| AcuI | CTGAAG | 2 cut(s) | 971, 1610 |
| AcyI | GRCGYC | 3 cut(s) | 525, 1311, 1389 |
| AfaI | GTAC | 6 cut(s) | 269, 582, 772, 804, 1145, 1647 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 277, 355, 413, 730 |
| AflII | CTTAAG | 2 cut(s) | 509, 659 |
| AflIII | ACRYGT | 1 cut(s) | 1394 |
| AgeI | ACCGGT | 1 cut(s) | 1707 |
| AgsI | TTSAA | 7 cut(s) | 9, 759, 1004, 1340, 1382, 1679, 1694 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1459 |
| AjnI | CCWGG | 3 cut(s) | 1360, 1384, 1579 |
| Alw21I | GWGCWC | 4 cut(s) | 285, 1274, 1510, 1780 |
| AlwI | GGATC | 7 cut(s) | 224, 237, 510, 680, 1113, 1126, 1284 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1186, 1475 |
| Ama87I | CYCGRG | 5 cut(s) | 91, 162, 284, 497, 725 |
| Aor13HI | TCCGGA | 1 cut(s) | 81 |
| ApeKI | GCWGC | 8 cut(s) | 980, 1073, 1180, 1183, 1604, 1662, 1794, 1797 |
| ApoI | RAATTY | 1 cut(s) | 832 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1394, 1426 |
| AseI | ATTAAT | 1 cut(s) | 1563 |
| AsiGI | ACCGGT | 1 cut(s) | 1707 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 812 |
| AspLEI | GCGC | 3 cut(s) | 48, 241, 395 |
| AspS9I | GGNCC | 2 cut(s) | 614, 722 |
| AsuC2I | CCSGG | 3 cut(s) | 121, 349, 1457 |
| AsuHPI | GGTGA | 4 cut(s) | 235, 695, 1246, 1797 |
| AvaI | CYCGRG | 5 cut(s) | 91, 162, 284, 497, 725 |
| BamHI | GGATCC | 2 cut(s) | 229, 1118 |
| BanI | GGYRCC | 2 cut(s) | 1019, 1710 |
| BanII | GRGCYC | 3 cut(s) | 202, 285, 348 |
| BbsI | GAAGAC | 1 cut(s) | 962 |
| Bbv12I | GWGCWC | 4 cut(s) | 285, 1274, 1510, 1780 |
| BbvCI | CCTCAGC | 1 cut(s) | 630 |
| BbvI | GCAGC | 8 cut(s) | 992, 1060, 1192, 1195, 1616, 1649, 1784, 1806 |
| BccI | CCATC | 6 cut(s) | 188, 559, 897, 1024, 1103, 1217 |
| BceAI | ACGGC | 1 cut(s) | 204 |
| BciT130I | CCWGG | 3 cut(s) | 1362, 1386, 1581 |
| BclI | TGATCA | 1 cut(s) | 700 |
| BcnI | CCSGG | 3 cut(s) | 121, 349, 1457 |
| BfaI | CTAG | 3 cut(s) | 783, 912, 1494 |
| BfmI | CTRYAG | 2 cut(s) | 960, 1421 |
| BfoI | RGCGCY | 1 cut(s) | 49 |
| BfrI | CTTAAG | 2 cut(s) | 509, 659 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 197 |
| BglII | AGATCT | 2 cut(s) | 168, 1496 |
| Bme1390I | CCNGG | 6 cut(s) | 121, 349, 1362, 1386, 1457, 1581 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1459 |
| BmeT110I | CYCGRG | 5 cut(s) | 91, 162, 284, 497, 725 |
| BmgT120I | GGNCC | 2 cut(s) | 614, 722 |
| BmrFI | CCNGG | 6 cut(s) | 121, 349, 1362, 1386, 1457, 1581 |
| BmrI | ACTGGG | 1 cut(s) | 940 |
| BmsI | GCATC | 3 cut(s) | 1112, 1824, 1837 |
| BmuI | ACTGGG | 1 cut(s) | 940 |
| BpiI | GAAGAC | 1 cut(s) | 962 |
| BpmI | CTGGAG | 3 cut(s) | 543, 818, 1629 |
| Bpu10I | CCTNAGC | 3 cut(s) | 440, 450, 630 |
| BpuEI | CTTGAG | 2 cut(s) | 26, 846 |
| BpuMI | CCSGG | 3 cut(s) | 121, 349, 1457 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1227 |
| BsaHI | GRCGYC | 3 cut(s) | 525, 1311, 1389 |
| BsaJI | CCNNGG | 5 cut(s) | 347, 372, 1122, 1808, 1828 |
| BsaWI | WCCGGW | 2 cut(s) | 81, 1707 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 272, 302, 335, 365 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 277, 355, 413, 730 |
| Bse118I | RCCGGY | 1 cut(s) | 1707 |
| Bse1I | ACTGG | 4 cut(s) | 266, 440, 801, 935 |
| Bse3DI | GCAATG | 2 cut(s) | 1076, 1782 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1227 |
| BseAI | TCCGGA | 1 cut(s) | 81 |
| BseBI | CCWGG | 3 cut(s) | 1362, 1386, 1581 |
| BseDI | CCNNGG | 5 cut(s) | 347, 372, 1122, 1808, 1828 |
| BseGI | GGATG | 4 cut(s) | 304, 908, 1039, 1290 |
| BseJI | GATNNNNATC | 1 cut(s) | 1227 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 277, 355, 413, 730 |
| BseMI | GCAATG | 2 cut(s) | 1076, 1782 |
| BseMII | CTCAG | 4 cut(s) | 487, 590, 621, 1292 |
| BseNI | ACTGG | 4 cut(s) | 266, 440, 801, 935 |
| BseRI | GAGGAG | 2 cut(s) | 392, 645 |
| BseX3I | CGGCCG | 2 cut(s) | 132, 189 |
| BseXI | GCAGC | 8 cut(s) | 992, 1060, 1192, 1195, 1616, 1649, 1784, 1806 |
| Bsh1236I | CGCG | 2 cut(s) | 395, 1350 |
| Bsh1285I | CGRYCG | 5 cut(s) | 125, 135, 139, 192, 1456 |
| BshNI | GGYRCC | 2 cut(s) | 1019, 1710 |
| BshTI | ACCGGT | 1 cut(s) | 1707 |
| BsiEI | CGRYCG | 5 cut(s) | 125, 135, 139, 192, 1456 |
| BsiHKAI | GWGCWC | 4 cut(s) | 285, 1274, 1510, 1780 |
| BsiHKCI | CYCGRG | 5 cut(s) | 91, 162, 284, 497, 725 |
| BsiSI | CCGG | 7 cut(s) | 82, 121, 203, 349, 977, 1456, 1708 |
| BslFI | GGGAC | 1 cut(s) | 1415 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 277, 355, 413, 730 |
| BsmFI | GGGAC | 1 cut(s) | 1415 |
| BsmI | GAATGC | 1 cut(s) | 1422 |
| BsoBI | CYCGRG | 5 cut(s) | 91, 162, 284, 497, 725 |
| Bsp1286I | GDGCHC | 6 cut(s) | 202, 285, 348, 1274, 1510, 1780 |
| Bsp13I | TCCGGA | 1 cut(s) | 81 |
| Bsp19I | CCATGG | 1 cut(s) | 372 |
| BspCNI | CTCAG | 4 cut(s) | 486, 589, 622, 1293 |
| BspEI | TCCGGA | 1 cut(s) | 81 |
| BspFNI | CGCG | 2 cut(s) | 395, 1350 |
| BspHI | TCATGA | 1 cut(s) | 1366 |
| BspMAI | CTGCAG | 1 cut(s) | 964 |
| BspPI | GGATC | 7 cut(s) | 224, 237, 510, 680, 1113, 1126, 1284 |
| BspQI | GCTCTTC | 1 cut(s) | 1629 |
| BspT107I | GGYRCC | 2 cut(s) | 1019, 1710 |
| BspTI | CTTAAG | 2 cut(s) | 509, 659 |
| BsrBI | CCGCTC | 1 cut(s) | 58 |
| BsrDI | GCAATG | 2 cut(s) | 1076, 1782 |
| BsrFI | RCCGGY | 1 cut(s) | 1707 |
| BsrI | ACTGG | 4 cut(s) | 266, 440, 801, 935 |
| BssAI | RCCGGY | 1 cut(s) | 1707 |
| BssECI | CCNNGG | 5 cut(s) | 347, 372, 1122, 1808, 1828 |
| BssNI | GRCGYC | 3 cut(s) | 525, 1311, 1389 |
| BssT1I | CCWWGG | 3 cut(s) | 372, 1122, 1828 |
| Bst2UI | CCWGG | 3 cut(s) | 1362, 1386, 1581 |
| Bst4CI | ACNGT | 6 cut(s) | 621, 1054, 1252, 1471, 1477, 1683 |
| Bst6I | CTCTTC | 1 cut(s) | 1629 |
| BstACI | GRCGYC | 3 cut(s) | 525, 1311, 1389 |
| BstAFI | CTTAAG | 2 cut(s) | 509, 659 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1082, 1784 |
| BstC8I | GCNNGC | 8 cut(s) | 237, 456, 732, 826, 1014, 1083, 1284, 1660 |
| BstDEI | CTNAG | 7 cut(s) | 440, 450, 473, 576, 630, 1088, 1301 |
| BstDSI | CCRYGG | 2 cut(s) | 372, 1808 |
| BstF5I | GGATG | 4 cut(s) | 304, 908, 1039, 1290 |
| BstFNI | CGCG | 2 cut(s) | 395, 1350 |
| BstH2I | RGCGCY | 1 cut(s) | 49 |
| BstHHI | GCGC | 3 cut(s) | 48, 241, 395 |
| BstMCI | CGRYCG | 5 cut(s) | 125, 135, 139, 192, 1456 |
| BstNI | CCWGG | 3 cut(s) | 1362, 1386, 1581 |
| BstNSI | RCATGY | 3 cut(s) | 239, 1286, 1398 |
| BstSCI | CCNGG | 6 cut(s) | 119, 347, 1360, 1384, 1455, 1579 |
| BstSFI | CTRYAG | 2 cut(s) | 960, 1421 |
| BstUI | CGCG | 2 cut(s) | 395, 1350 |
| BstV1I | GCAGC | 8 cut(s) | 992, 1060, 1192, 1195, 1616, 1649, 1784, 1806 |
| BstV2I | GAAGAC | 1 cut(s) | 962 |
| BstX2I | RGATCY | 5 cut(s) | 168, 229, 502, 1118, 1496 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1129 |
| BstYI | RGATCY | 5 cut(s) | 168, 229, 502, 1118, 1496 |
| BstZI | CGGCCG | 2 cut(s) | 132, 189 |
| BtgI | CCRYGG | 2 cut(s) | 372, 1808 |
| BtgZI | GCGATG | 1 cut(s) | 1735 |
| BtsCI | GGATG | 4 cut(s) | 304, 908, 1039, 1290 |
| BtsI | GCAGTG | 1 cut(s) | 885 |
| BtsIMutI | CAGTG | 2 cut(s) | 885, 1050 |
| Cac8I | GCNNGC | 8 cut(s) | 237, 456, 732, 826, 1014, 1083, 1284, 1660 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1186, 1475 |
| CciI | TCATGA | 1 cut(s) | 1366 |
| CfoI | GCGC | 3 cut(s) | 48, 241, 395 |
| Cfr10I | RCCGGY | 1 cut(s) | 1707 |
| Cfr13I | GGNCC | 2 cut(s) | 614, 722 |
| CseI | GACGC | 4 cut(s) | 141, 1300, 1378, 1696 |
| CsiI | ACCWGGT | 1 cut(s) | 1579 |
| Csp6I | GTAC | 6 cut(s) | 268, 581, 771, 803, 1144, 1646 |
| CspAI | ACCGGT | 1 cut(s) | 1707 |
| CviAII | CATG | 8 cut(s) | 236, 373, 922, 1192, 1283, 1367, 1395, 1759 |
| CviQI | GTAC | 6 cut(s) | 268, 581, 771, 803, 1144, 1646 |
| DdeI | CTNAG | 7 cut(s) | 440, 450, 473, 576, 630, 1088, 1301 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1459 |
| EaeI | YGGCCR | 5 cut(s) | 132, 189, 204, 427, 1761 |
| EagI | CGGCCG | 2 cut(s) | 132, 189 |
| Eam1104I | CTCTTC | 1 cut(s) | 1629 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1459 |
| EarI | CTCTTC | 1 cut(s) | 1629 |
| EciI | GGCGGA | 2 cut(s) | 106, 191 |
| Ecl136II | GAGCTC | 1 cut(s) | 283 |
| EclXI | CGGCCG | 2 cut(s) | 132, 189 |
| Eco130I | CCWWGG | 3 cut(s) | 372, 1122, 1828 |
| Eco147I | AGGCCT | 2 cut(s) | 812, 1357 |
| Eco24I | GRGCYC | 3 cut(s) | 202, 285, 348 |
| Eco52I | CGGCCG | 2 cut(s) | 132, 189 |
| Eco53kI | GAGCTC | 1 cut(s) | 283 |
| Eco57I | CTGAAG | 2 cut(s) | 971, 1610 |
| Eco88I | CYCGRG | 5 cut(s) | 91, 162, 284, 497, 725 |
| EcoICRI | GAGCTC | 1 cut(s) | 283 |
| EcoRII | CCWGG | 3 cut(s) | 1360, 1384, 1579 |
| EcoT14I | CCWWGG | 3 cut(s) | 372, 1122, 1828 |
| EcoT38I | GRGCYC | 3 cut(s) | 202, 285, 348 |
| ErhI | CCWWGG | 3 cut(s) | 372, 1122, 1828 |
| FaeI | CATG | 8 cut(s) | 239, 376, 925, 1195, 1286, 1370, 1398, 1762 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1139, 1171, 1812, 1844 |
| FaqI | GGGAC | 1 cut(s) | 1415 |
| FatI | CATG | 8 cut(s) | 235, 372, 921, 1191, 1282, 1366, 1394, 1758 |
| FauI | CCCGC | 1 cut(s) | 1626 |
| FbaI | TGATCA | 1 cut(s) | 700 |
| FblI | GTMKAC | 1 cut(s) | 185 |
| FokI | GGATG | 4 cut(s) | 311, 915, 1046, 1277 |
| FriOI | GRGCYC | 3 cut(s) | 202, 285, 348 |
| FspBI | CTAG | 3 cut(s) | 783, 912, 1494 |
| GlaI | GCGC | 3 cut(s) | 47, 240, 394 |
| GsuI | CTGGAG | 3 cut(s) | 543, 818, 1629 |
| HaeII | RGCGCY | 1 cut(s) | 49 |
| HapII | CCGG | 7 cut(s) | 82, 121, 203, 349, 977, 1456, 1708 |
| HgaI | GACGC | 4 cut(s) | 141, 1300, 1378, 1696 |
| HhaI | GCGC | 3 cut(s) | 48, 241, 395 |
| Hin1I | GRCGYC | 3 cut(s) | 525, 1311, 1389 |
| Hin1II | CATG | 8 cut(s) | 239, 376, 925, 1195, 1286, 1370, 1398, 1762 |
| Hin6I | GCGC | 3 cut(s) | 46, 239, 393 |
| HinP1I | GCGC | 3 cut(s) | 46, 239, 393 |
| HincII | GTYRAC | 4 cut(s) | 186, 259, 1558, 1686 |
| HindII | GTYRAC | 4 cut(s) | 186, 259, 1558, 1686 |
| HinfI | GANTC | 8 cut(s) | 89, 304, 669, 915, 1037, 1196, 1237, 1460 |
| HpaII | CCGG | 7 cut(s) | 82, 121, 203, 349, 977, 1456, 1708 |
| HphI | GGTGA | 4 cut(s) | 235, 695, 1246, 1797 |
| Hpy166II | GTNNAC | 7 cut(s) | 186, 259, 794, 1315, 1558, 1686, 1805 |
| Hpy188I | TCNGA | 5 cut(s) | 314, 337, 952, 1108, 1629 |
| Hpy8I | GTNNAC | 7 cut(s) | 186, 259, 794, 1315, 1558, 1686, 1805 |
| Hpy99I | CGWCG | 4 cut(s) | 73, 190, 527, 530 |
| HpyAV | CCTTC | 8 cut(s) | 79, 208, 220, 802, 823, 1201, 1301, 1784 |
| HpyCH4III | ACNGT | 6 cut(s) | 621, 1054, 1252, 1471, 1477, 1683 |
| HpyCH4IV | ACGT | 2 cut(s) | 255, 525 |
| HpyCH4V | TGCA | 8 cut(s) | 481, 713, 839, 962, 1076, 1180, 1480, 1665 |
| HpyF3I | CTNAG | 7 cut(s) | 440, 450, 473, 576, 630, 1088, 1301 |
| HpySE526I | ACGT | 2 cut(s) | 255, 525 |
| Hsp92I | GRCGYC | 3 cut(s) | 525, 1311, 1389 |
| Hsp92II | CATG | 8 cut(s) | 239, 376, 925, 1195, 1286, 1370, 1398, 1762 |
| HspAI | GCGC | 3 cut(s) | 46, 239, 393 |
| Kpn2I | TCCGGA | 1 cut(s) | 81 |
| Ksp22I | TGATCA | 1 cut(s) | 700 |
| LguI | GCTCTTC | 1 cut(s) | 1629 |
| LmnI | GCTCC | 9 cut(s) | 63, 205, 280, 343, 646, 1269, 1375, 1669, 1812 |
| Lsp1109I | GCAGC | 8 cut(s) | 992, 1060, 1192, 1195, 1616, 1649, 1784, 1806 |
| LweI | GCATC | 3 cut(s) | 1112, 1824, 1837 |
| MabI | ACCWGGT | 1 cut(s) | 1579 |
| MaeI | CTAG | 3 cut(s) | 783, 912, 1494 |
| MaeII | ACGT | 2 cut(s) | 255, 525 |
| MaeIII | GTNAC | 5 cut(s) | 1327, 1390, 1448, 1471, 1486 |
| MbiI | CCGCTC | 1 cut(s) | 58 |
| MboII | GAAGA | 8 cut(s) | 223, 546, 962, 965, 1016, 1130, 1616, 1706 |
| MflI | RGATCY | 5 cut(s) | 168, 229, 502, 1118, 1496 |
| MhlI | GDGCHC | 6 cut(s) | 202, 285, 348, 1274, 1510, 1780 |
| MluCI | AATT | 9 cut(s) | 9, 594, 696, 747, 832, 894, 993, 1318, 1464 |
| MlyI | GAGTC | 4 cut(s) | 83, 313, 1046, 1469 |
| MmeI | TCCRAC | 4 cut(s) | 292, 363, 571, 1318 |
| MroI | TCCGGA | 1 cut(s) | 81 |
| MroXI | GAANNNNTTC | 1 cut(s) | 812 |
| MseI | TTAA | 7 cut(s) | 366, 510, 543, 660, 1059, 1563, 1861 |
| MspA1I | CMGCKG | 6 cut(s) | 534, 563, 1186, 1607, 1662, 1797 |
| MspCI | CTTAAG | 2 cut(s) | 509, 659 |
| MspI | CCGG | 7 cut(s) | 82, 121, 203, 349, 977, 1456, 1708 |
| MspR9I | CCNGG | 6 cut(s) | 121, 349, 1362, 1386, 1457, 1581 |
| Mva1269I | GAATGC | 1 cut(s) | 1422 |
| MvaI | CCWGG | 3 cut(s) | 1362, 1386, 1581 |
| MvnI | CGCG | 2 cut(s) | 395, 1350 |
| NciI | CCSGG | 3 cut(s) | 121, 349, 1457 |
| NcoI | CCATGG | 1 cut(s) | 372 |
| NlaIII | CATG | 8 cut(s) | 239, 376, 925, 1195, 1286, 1370, 1398, 1762 |
| NmeAIII | GCCGAG | 2 cut(s) | 5, 152 |
| NmuCI | GTSAC | 3 cut(s) | 1327, 1390, 1486 |
| NspI | RCATGY | 3 cut(s) | 239, 1286, 1398 |
| PaeI | GCATGC | 2 cut(s) | 239, 1286 |
| PagI | TCATGA | 1 cut(s) | 1366 |
| PceI | AGGCCT | 2 cut(s) | 812, 1357 |
| PciI | ACATGT | 1 cut(s) | 1394 |
| PciSI | GCTCTTC | 1 cut(s) | 1629 |
| PctI | GAATGC | 1 cut(s) | 1422 |
| PdmI | GAANNNNTTC | 1 cut(s) | 812 |
| PfeI | GAWTC | 4 cut(s) | 669, 915, 1196, 1237 |
| PflFI | GACNNNGTC | 1 cut(s) | 527 |
| PinAI | ACCGGT | 1 cut(s) | 1707 |
| Ple19I | CGATCG | 1 cut(s) | 139 |
| PleI | GAGTC | 4 cut(s) | 83, 312, 1045, 1468 |
| PpsI | GAGTC | 4 cut(s) | 83, 312, 1045, 1468 |
| PscI | ACATGT | 1 cut(s) | 1394 |
| PshBI | ATTAAT | 1 cut(s) | 1563 |
| Psp124BI | GAGCTC | 1 cut(s) | 285 |
| Psp6I | CCWGG | 3 cut(s) | 1360, 1384, 1579 |
| PspGI | CCWGG | 3 cut(s) | 1360, 1384, 1579 |
| PspPI | GGNCC | 2 cut(s) | 614, 722 |
| PstI | CTGCAG | 1 cut(s) | 964 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1186, 1475 |
| PsuI | RGATCY | 5 cut(s) | 168, 229, 502, 1118, 1496 |
| PsyI | GACNNNGTC | 1 cut(s) | 527 |
| PvuI | CGATCG | 1 cut(s) | 139 |
| PvuII | CAGCTG | 5 cut(s) | 563, 1186, 1607, 1662, 1797 |
| RsaI | GTAC | 6 cut(s) | 269, 582, 772, 804, 1145, 1647 |
| RsaNI | GTAC | 6 cut(s) | 268, 581, 771, 803, 1144, 1646 |
| SacI | GAGCTC | 1 cut(s) | 285 |
| SalI | GTCGAC | 1 cut(s) | 184 |
| SapI | GCTCTTC | 1 cut(s) | 1629 |
| SaqAI | TTAA | 7 cut(s) | 366, 510, 543, 660, 1059, 1563, 1861 |
| Sau96I | GGNCC | 2 cut(s) | 614, 722 |
| SchI | GAGTC | 4 cut(s) | 83, 313, 1046, 1469 |
| ScrFI | CCNGG | 6 cut(s) | 121, 349, 1362, 1386, 1457, 1581 |
| SduI | GDGCHC | 6 cut(s) | 202, 285, 348, 1274, 1510, 1780 |
| SexAI | ACCWGGT | 1 cut(s) | 1579 |
| SfaNI | GCATC | 3 cut(s) | 1112, 1824, 1837 |
| SfcI | CTRYAG | 2 cut(s) | 960, 1421 |
| SmlI | CTYRAG | 4 cut(s) | 41, 509, 659, 861 |
| SmoI | CTYRAG | 4 cut(s) | 41, 509, 659, 861 |
| SphI | GCATGC | 2 cut(s) | 239, 1286 |
| Sse9I | AATT | 9 cut(s) | 9, 594, 696, 747, 832, 894, 993, 1318, 1464 |
| SseBI | AGGCCT | 2 cut(s) | 812, 1357 |
| SspMI | CTAG | 3 cut(s) | 783, 912, 1494 |
| SstI | GAGCTC | 1 cut(s) | 285 |
| StuI | AGGCCT | 2 cut(s) | 812, 1357 |
| StyD4I | CCNGG | 6 cut(s) | 119, 347, 1360, 1384, 1455, 1579 |
| StyI | CCWWGG | 3 cut(s) | 372, 1122, 1828 |
| TaaI | ACNGT | 6 cut(s) | 621, 1054, 1252, 1471, 1477, 1683 |
| TaiI | ACGT | 2 cut(s) | 258, 528 |
| TaqI | TCGA | 6 cut(s) | 68, 125, 185, 518, 1731, 1845 |
| TasI | AATT | 9 cut(s) | 9, 594, 696, 747, 832, 894, 993, 1318, 1464 |
| TatI | WGTACW | 1 cut(s) | 1645 |
| TauI | GCSGC | 3 cut(s) | 250, 362, 1766 |
| TfiI | GAWTC | 4 cut(s) | 669, 915, 1196, 1237 |
| Tru1I | TTAA | 7 cut(s) | 366, 510, 543, 660, 1059, 1563, 1861 |
| Tru9I | TTAA | 7 cut(s) | 366, 510, 543, 660, 1059, 1563, 1861 |
| TscAI | CASTG | 2 cut(s) | 892, 1057 |
| TseFI | GTSAC | 3 cut(s) | 1327, 1390, 1486 |
| TseI | GCWGC | 8 cut(s) | 980, 1073, 1180, 1183, 1604, 1662, 1794, 1797 |
| Tsp45I | GTSAC | 3 cut(s) | 1327, 1390, 1486 |
| TspDTI | ATGAA | 4 cut(s) | 99, 661, 861, 1324 |
| TspGWI | ACGGA | 6 cut(s) | 88, 335, 806, 1131, 1289, 1825 |
| TspRI | CASTG | 2 cut(s) | 892, 1057 |
| Tth111I | GACNNNGTC | 1 cut(s) | 527 |
| Vha464I | CTTAAG | 2 cut(s) | 509, 659 |
| VspI | ATTAAT | 1 cut(s) | 1563 |
| XapI | RAATTY | 1 cut(s) | 832 |
| XceI | RCATGY | 3 cut(s) | 239, 1286, 1398 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 379 |
| XmiI | GTMKAC | 1 cut(s) | 185 |
| XmnI | GAANNNNTTC | 1 cut(s) | 812 |
| XspI | CTAG | 3 cut(s) | 783, 912, 1494 |
| ZraI | GACGTC | 1 cut(s) | 526 |