Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006438.1

Orthogroup ID

OG0003547

Physical Location & Seq

Genomic Coordinates Reverse (-)

53180 .. 58494

Gene Structure 5315 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006438.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

atggcttcaatttccggcatttgttcctcttctccgactctgcaaccgcggctgagaccggcggcgagtctattacgtaaagactccgtttcgtttccgacggcccggcccaggcccggcgatcggagcttgttcgctcagtcggtggcgcgggagatcaaggccgagttggccaaggccgacggcgatggcgctctgattaaggaggagaagaagaagaaggttctggagaaggatcctcgggcgttgtggcggaggtacgtggactggttgtaccagcacaaggagctagggctgtatttggatgtgagtcgggtcgggtttaccgacgagttcgtcgcggaaatggagccccggctccaggcggcgtttaaggccatggaggacctggagaaaggcgcgattgcgaatcccgatgaggggcggatggtcgggcattactggctgagagaccctaagcgggcgccgaaaccgatgctcacggctcagattgagaacacgctcgaggcgctgctcaagttctccgacgacgtcgtcagcggtaagattaagccgccggcttcttcggagggtcgttttactcaggttctttcggttggaatcggaggctcggcacttggaccacagtttgttgctgaggcattggcgcctgatgttcctcctcttaagggtgtggctatcactcaagaaaattcattattagacaacactgctagaattgagggctggttagctagattcccaatgtttgactgggttgggggaagaacatctgaaatgtctgcagttggtcttcttccagcagcgcttcagggaattgacattaaagaaatgctcgctggtggaaagttgatggatgaagctaatagaaccactgtggttaagaataatcctgctgccttacttgctttatgctggtattgggctactgatggattgggatccaaggatatggttgttcttccttacaaggacagcctattattatttagtcggtatttgcagcagttggtcatggaatctatcgggaaagaatttgaccttgatggtaatcgggtgaatcaaggacttactgtgtacggaaataaagggagcacggatcagcatgcatacatccaacaactgagagacggcgtgcacaatttctttgtgacattcattgaagtactacgagataggcctcctggtcatgattgggagcctgaaccaggtgtcacatgtggtgactatctatttggaatgctacagggaacacgatcggctctttattctaatgaccgagagtcgattacggtttctgtggaagaagtgacacctagatctgtaggtgctcttatagcactttatgagagagcggttgggatttatgcctcacttgtcaacattaatgcttaccatcaacctggtgtggaggccgggaagaaagcagccggagaagtattagctcttcagaaacgggttttatccgtacttaatgaggccagctgtaaagagcctgttgagccattgacactagatgaagtagccgatcggtgccgcgctgctgaagatattgaaatgatttacaagatcatcgctcacatggcggcaaatgacagagctcttattgctgaaggcagttgcggttcaccacggagtgtcaaagttttcctcggcgagtgtaatgtggaggcattatattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004347 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0008150 GO:0008152 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009909 GO:0009911 GO:0009941 GO:0009987 GO:0016853 GO:0016860 GO:0016861 GO:0031967 GO:0031975 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0051094 GO:0051239 GO:0051240 GO:0065007 GO:0071704 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

ko00010 ko00030 ko00500 ko00520 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00030 map00500 map00520 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

PGI

Protein Analysis

560

Amino Acids

61.44

Weight (kDa)

5.56

Isoelectric Point (pI)

40.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003547)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24620 AT4G24620
fragaria_vesca	FvH4_5g35680 FvH4_5g35680
malus_domestica	MD08G1194100.v1.1 MD15G1382200.v1.1
prunus_persica	Prupe.1G528400_v2.0.a1 Prupe.1G528400_v2.0.a1
pyrus_communis	pycom15g34220
rosa_chinensis	RchiOBHm_Chr7g0237251 RchiOBHm_Chr7g0237271 RchiOBHm_Chr7g0237281 RchiOBHm_Chr7g0237311 RchiOBHm_Chr7g0237321
rosa_laevigata	RLG00000001012 RLG00000001018
rosa_multiflora	Rmu_sc0002923.1_g000043 Rmu_sc0002923.1_g000049 Rmu_sc0006438.1_g000001 Rmu_sc0006438.1_g000006 Rmu_sc0006438.1_g000007
rosa_roxburghii	Rroxscaffold_3G00224320
rosa_rugosa	Rorug07G0302600 Rorug07G0302700
rosa_samantha	Rh7AG459300 Rh7AG459500 Rh7AG459600 Rh7AG459700 Rh7AG459800 Rh7BG429700 Rh7CG477100 Rh7DG446400
rosa_wichuraiana	Rw0G003870 Rw7G038060 Rw7G038080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	335, 533
AatII	GACGTC	1 cut(s)	534
AccB1I	GGYRCC	3 cut(s)	463, 646, 1533
AccBSI	CCGCTC	1 cut(s)	1355
AccII	CGCG	5 cut(s)	49, 151, 341, 401, 1539
AclWI	GGATC	5 cut(s)	230, 243, 936, 949, 1107
AcoI	YGGCCR	1 cut(s)	171
AcsI	RAATTY	2 cut(s)	691, 1034
AcuI	CTGAAG	4 cut(s)	794, 1433, 1566, 1632
AcyI	GRCGYC	3 cut(s)	464, 531, 647
AdeI	CACNNNGTG	1 cut(s)	1637
AfaI	GTAC	5 cut(s)	260, 275, 1079, 1167, 1470
AfeI	AGCGCT	1 cut(s)	807
AflII	CTTAAG	1 cut(s)	665
AflIII	ACRYGT	1 cut(s)	1217
AgsI	TTSAA	3 cut(s)	9, 1163, 1556
AhdI	GACNNNNNGTC	1 cut(s)	1282
AjnI	CCWGG	6 cut(s)	110, 360, 387, 1183, 1207, 1402
AluBI	AGCT	7 cut(s)	129, 289, 734, 863, 1445, 1485, 1601
AluI	AGCT	7 cut(s)	129, 289, 734, 863, 1445, 1485, 1601
Alw21I	GWGCWC	4 cut(s)	1097, 1140, 1333, 1603
Alw26I	GTCTC	3 cut(s)	49, 444, 1122
Alw44I	GTGCAC	1 cut(s)	1136
AlwI	GGATC	5 cut(s)	230, 243, 936, 949, 1107
Ama87I	CYCGRG	2 cut(s)	240, 503
Aor51HI	AGCGCT	1 cut(s)	807
ApaLI	GTGCAC	1 cut(s)	1136
ApeKI	GCWGC	6 cut(s)	511, 803, 896, 1003, 1427, 1541
ApoI	RAATTY	2 cut(s)	691, 1034
ArsI	GACNNNNNNTTYG	2 cut(s)	1217, 1249
AseI	ATTAAT	1 cut(s)	1386
AspLEI	GCGC	8 cut(s)	151, 194, 401, 466, 511, 649, 808, 1541
AspS9I	GGNCC	5 cut(s)	103, 108, 114, 385, 620
AsuC2I	CCSGG	4 cut(s)	106, 117, 355, 1417
AsuHPI	GGTGA	3 cut(s)	1069, 1235, 1620
AvaI	CYCGRG	2 cut(s)	240, 503
AvaII	GGWCC	2 cut(s)	385, 620
BaeGI	GKGCMC	1 cut(s)	1140
BalI	TGGCCA	1 cut(s)	173
BamHI	GGATCC	2 cut(s)	235, 941
BanI	GGYRCC	3 cut(s)	463, 646, 1533
BanII	GRGCYC	2 cut(s)	354, 1603
BarI	GAAGNNNNNNTAC	2 cut(s)	1431, 1463
BbsI	GAAGAC	1 cut(s)	785
Bbv12I	GWGCWC	4 cut(s)	1097, 1140, 1333, 1603
BbvCI	CCTCAGC	1 cut(s)	636
BbvI	GCAGC	6 cut(s)	498, 815, 883, 1015, 1439, 1528
BccI	CCATC	6 cut(s)	182, 421, 847, 926, 1040, 1404
BceAI	ACGGC	4 cut(s)	117, 199, 498, 1147
BcgI	CGANNNNNNTGC	2 cut(s)	457, 491
BciT130I	CCWGG	6 cut(s)	112, 362, 389, 1185, 1209, 1404
BcnI	CCSGG	4 cut(s)	106, 117, 355, 1417
BcoDI	GTCTC	3 cut(s)	49, 444, 1122
BfaI	CTAG	5 cut(s)	290, 714, 735, 1317, 1514
BfmI	CTRYAG	3 cut(s)	783, 1244, 1323
BfoI	RGCGCY	5 cut(s)	195, 467, 512, 650, 809
BfrI	CTTAAG	1 cut(s)	665
BglI	GCCNNNNNGGC	1 cut(s)	170
BglII	AGATCT	1 cut(s)	1319
BmcAI	AGTACT	1 cut(s)	1167
Bme18I	GGWCC	2 cut(s)	385, 620
BmeRI	GACNNNNNGTC	1 cut(s)	1282
BmeT110I	CYCGRG	2 cut(s)	240, 503
BmgT120I	GGNCC	5 cut(s)	103, 108, 114, 385, 620
BmiI	GGNNCC	8 cut(s)	237, 351, 359, 465, 648, 943, 1200, 1535
BmrI	ACTGGG	1 cut(s)	763
BmsI	GCATC	1 cut(s)	465
BmuI	ACTGGG	1 cut(s)	763
BpiI	GAAGAC	1 cut(s)	785
BpmI	CTGGAG	3 cut(s)	248, 344, 410
Bpu10I	CCTNAGC	2 cut(s)	456, 636
BpuEI	CTTGAG	2 cut(s)	500, 669
BpuMI	CCSGG	4 cut(s)	106, 117, 355, 1417
BsaAI	YACGTR	2 cut(s)	77, 262
BsaBI	GATNNNNATC	2 cut(s)	940, 1050
BsaHI	GRCGYC	3 cut(s)	464, 531, 647
BsaI	GGTCTC	2 cut(s)	49, 444
BsaJI	CCNNGG	9 cut(s)	47, 110, 174, 239, 353, 378, 945, 1631, 1651
Bse118I	RCCGGY	2 cut(s)	58, 556
Bse1I	ACTGG	3 cut(s)	272, 446, 758
Bse8I	GATNNNNATC	2 cut(s)	940, 1050
BseBI	CCWGG	6 cut(s)	112, 362, 389, 1185, 1209, 1404
BseDI	CCNNGG	9 cut(s)	47, 110, 174, 239, 353, 378, 945, 1631, 1651
BseGI	GGATG	4 cut(s)	310, 432, 862, 1113
BseJI	GATNNNNATC	2 cut(s)	940, 1050
BseMII	CTCAG	7 cut(s)	44, 152, 437, 500, 596, 627, 1115
BseNI	ACTGG	3 cut(s)	272, 446, 758
BseRI	GAGGAG	2 cut(s)	221, 651
BseSI	GKGCMC	1 cut(s)	1140
BseXI	GCAGC	6 cut(s)	498, 815, 883, 1015, 1439, 1528
Bsh1236I	CGCG	5 cut(s)	49, 151, 341, 401, 1539
Bsh1285I	CGRYCG	3 cut(s)	124, 1259, 1531
BshNI	GGYRCC	3 cut(s)	463, 646, 1533
BsiEI	CGRYCG	3 cut(s)	124, 1259, 1531
BsiHKAI	GWGCWC	4 cut(s)	1097, 1140, 1333, 1603
BsiHKCI	CYCGRG	2 cut(s)	240, 503
BsiSI	CCGG	8 cut(s)	15, 59, 106, 117, 355, 557, 1416, 1431
BsmAI	GTCTC	3 cut(s)	49, 444, 1122
BsmBI	CGTCTC	1 cut(s)	1122
BsmI	GAATGC	1 cut(s)	1245
Bso31I	GGTCTC	2 cut(s)	49, 444
BsoBI	CYCGRG	2 cut(s)	240, 503
Bsp1286I	GDGCHC	5 cut(s)	354, 1097, 1140, 1333, 1603
Bsp143I	GATC	9 cut(s)	121, 156, 235, 941, 1099, 1256, 1319, 1528, 1569
Bsp19I	CCATGG	1 cut(s)	378
BspCNI	CTCAG	7 cut(s)	45, 151, 438, 499, 595, 628, 1116
BspFNI	CGCG	5 cut(s)	49, 151, 341, 401, 1539
BspHI	TCATGA	1 cut(s)	1189
BspLI	GGNNCC	8 cut(s)	237, 351, 359, 465, 648, 943, 1200, 1535
BspMAI	CTGCAG	1 cut(s)	787
BspPI	GGATC	5 cut(s)	230, 243, 936, 949, 1107
BspQI	GCTCTTC	1 cut(s)	1452
BspT107I	GGYRCC	3 cut(s)	463, 646, 1533
BspTI	CTTAAG	1 cut(s)	665
BspTNI	GGTCTC	2 cut(s)	49, 444
BsrBI	CCGCTC	1 cut(s)	1355
BsrFI	RCCGGY	2 cut(s)	58, 556
BsrI	ACTGG	3 cut(s)	272, 446, 758
BssAI	RCCGGY	2 cut(s)	58, 556
BssECI	CCNNGG	9 cut(s)	47, 110, 174, 239, 353, 378, 945, 1631, 1651
BssMI	GATC	9 cut(s)	121, 156, 235, 941, 1099, 1256, 1319, 1528, 1569
BssNI	GRCGYC	3 cut(s)	464, 531, 647
BssT1I	CCWWGG	3 cut(s)	174, 378, 945
Bst2UI	CCWGG	6 cut(s)	112, 362, 389, 1185, 1209, 1404
Bst4CI	ACNGT	4 cut(s)	627, 877, 1075, 1294
Bst6I	CTCTTC	2 cut(s)	34, 1452
BstACI	GRCGYC	3 cut(s)	464, 531, 647
BstAFI	CTTAAG	1 cut(s)	665
BstBAI	YACGTR	2 cut(s)	77, 262
BstC8I	GCNNGC	6 cut(s)	462, 558, 837, 1107, 1136, 1483
BstDEI	CTNAG	8 cut(s)	53, 138, 446, 456, 486, 582, 636, 1124
BstDSI	CCRYGG	3 cut(s)	47, 378, 1631
BstENI	CCTNNNNNAGG	1 cut(s)	1206
BstF5I	GGATG	4 cut(s)	310, 432, 862, 1113
BstFNI	CGCG	5 cut(s)	49, 151, 341, 401, 1539
BstH2I	RGCGCY	5 cut(s)	195, 467, 512, 650, 809
BstHHI	GCGC	8 cut(s)	151, 194, 401, 466, 511, 649, 808, 1541
BstKTI	GATC	9 cut(s)	124, 159, 238, 944, 1102, 1259, 1322, 1531, 1572
BstMAI	GTCTC	3 cut(s)	49, 444, 1122
BstMBI	GATC	9 cut(s)	121, 156, 235, 941, 1099, 1256, 1319, 1528, 1569
BstMCI	CGRYCG	3 cut(s)	124, 1259, 1531
BstNI	CCWGG	6 cut(s)	112, 362, 389, 1185, 1209, 1404
BstNSI	RCATGY	2 cut(s)	1109, 1221
BstSFI	CTRYAG	3 cut(s)	783, 1244, 1323
BstSLI	GKGCMC	1 cut(s)	1140
BstSNI	TACGTA	1 cut(s)	77
BstUI	CGCG	5 cut(s)	49, 151, 341, 401, 1539
BstV1I	GCAGC	6 cut(s)	498, 815, 883, 1015, 1439, 1528
BstV2I	GAAGAC	1 cut(s)	785
BstX2I	RGATCY	3 cut(s)	235, 941, 1319
BstXI	CCANNNNNNTGG	2 cut(s)	952, 1403
BstYI	RGATCY	3 cut(s)	235, 941, 1319
BtgI	CCRYGG	3 cut(s)	47, 378, 1631
BtgZI	GCGATG	2 cut(s)	201, 1558
BtsCI	GGATG	4 cut(s)	310, 432, 862, 1113
BtsI	GCAGTG	1 cut(s)	708
BtsIMutI	CAGTG	2 cut(s)	708, 873
Cac8I	GCNNGC	6 cut(s)	462, 558, 837, 1107, 1136, 1483
CciI	TCATGA	1 cut(s)	1189
CfoI	GCGC	8 cut(s)	151, 194, 401, 466, 511, 649, 808, 1541
Cfr10I	RCCGGY	2 cut(s)	58, 556
Cfr13I	GGNCC	5 cut(s)	103, 108, 114, 385, 620
Cfr42I	CCGCGG	1 cut(s)	50
CsiI	ACCWGGT	2 cut(s)	1207, 1402
Csp6I	GTAC	5 cut(s)	259, 274, 1078, 1166, 1469
CviAII	CATG	6 cut(s)	379, 1015, 1106, 1190, 1218, 1582
CviQI	GTAC	5 cut(s)	259, 274, 1078, 1166, 1469
DdeI	CTNAG	8 cut(s)	53, 138, 446, 456, 486, 582, 636, 1124
DinI	GGCGCC	2 cut(s)	465, 648
DpnI	GATC	9 cut(s)	123, 158, 237, 943, 1101, 1258, 1321, 1530, 1571
DpnII	GATC	9 cut(s)	121, 156, 235, 941, 1099, 1256, 1319, 1528, 1569
DraIII	CACNNNGTG	1 cut(s)	1637
DrdI	GACNNNNNNGTC	2 cut(s)	335, 533
DriI	GACNNNNNGTC	1 cut(s)	1282
DseDI	GACNNNNNNGTC	2 cut(s)	335, 533
EaeI	YGGCCR	1 cut(s)	171
Eam1104I	CTCTTC	2 cut(s)	34, 1452
Eam1105I	GACNNNNNGTC	1 cut(s)	1282
EarI	CTCTTC	2 cut(s)	34, 1452
EciI	GGCGGA	2 cut(s)	268, 439
Ecl136II	GAGCTC	1 cut(s)	1601
Eco105I	TACGTA	1 cut(s)	77
Eco130I	CCWWGG	3 cut(s)	174, 378, 945
Eco147I	AGGCCT	1 cut(s)	1180
Eco24I	GRGCYC	2 cut(s)	354, 1603
Eco31I	GGTCTC	2 cut(s)	49, 444
Eco47I	GGWCC	2 cut(s)	385, 620
Eco47III	AGCGCT	1 cut(s)	807
Eco53kI	GAGCTC	1 cut(s)	1601
Eco57I	CTGAAG	4 cut(s)	794, 1433, 1566, 1632
Eco88I	CYCGRG	2 cut(s)	240, 503
EcoICRI	GAGCTC	1 cut(s)	1601
EcoNI	CCTNNNNNAGG	1 cut(s)	1206
EcoO109I	RGGNCCY	1 cut(s)	385
EcoRII	CCWGG	6 cut(s)	110, 360, 387, 1183, 1207, 1402
EcoT14I	CCWWGG	3 cut(s)	174, 378, 945
EcoT22I	ATGCAT	1 cut(s)	1111
EcoT38I	GRGCYC	2 cut(s)	354, 1603
EgeI	GGCGCC	2 cut(s)	465, 648
EheI	GGCGCC	2 cut(s)	465, 648
ErhI	CCWWGG	3 cut(s)	174, 378, 945
Esp3I	CGTCTC	1 cut(s)	1122
FaeI	CATG	6 cut(s)	382, 1018, 1109, 1193, 1221, 1585
FatI	CATG	6 cut(s)	378, 1014, 1105, 1189, 1217, 1581
FauI	CCCGC	2 cut(s)	144, 453
FokI	GGATG	4 cut(s)	317, 439, 869, 1100
FriOI	GRGCYC	2 cut(s)	354, 1603
FspBI	CTAG	5 cut(s)	290, 714, 735, 1317, 1514
GlaI	GCGC	8 cut(s)	150, 193, 400, 465, 510, 648, 807, 1540
GsuI	CTGGAG	3 cut(s)	248, 344, 410
HaeII	RGCGCY	5 cut(s)	195, 467, 512, 650, 809
HapII	CCGG	8 cut(s)	15, 59, 106, 117, 355, 557, 1416, 1431
HhaI	GCGC	8 cut(s)	151, 194, 401, 466, 511, 649, 808, 1541
Hin1I	GRCGYC	3 cut(s)	464, 531, 647
Hin1II	CATG	6 cut(s)	382, 1018, 1109, 1193, 1221, 1585
Hin6I	GCGC	8 cut(s)	149, 192, 399, 464, 509, 647, 806, 1539
HinP1I	GCGC	8 cut(s)	149, 192, 399, 464, 509, 647, 806, 1539
HincII	GTYRAC	1 cut(s)	1381
HindII	GTYRAC	1 cut(s)	1381
HpaII	CCGG	8 cut(s)	15, 59, 106, 117, 355, 557, 1416, 1431
HphI	GGTGA	3 cut(s)	1069, 1235, 1620
Hpy166II	GTNNAC	6 cut(s)	265, 324, 1078, 1138, 1381, 1628
Hpy188III	TCNNGA	5 cut(s)	227, 413, 686, 1027, 1190
Hpy8I	GTNNAC	6 cut(s)	265, 324, 1078, 1138, 1381, 1628
Hpy99I	CGWCG	7 cut(s)	103, 185, 332, 341, 530, 533, 536
HpyAV	CCTTC	3 cut(s)	214, 226, 1607
HpyCH4III	ACNGT	4 cut(s)	627, 877, 1075, 1294
HpyCH4IV	ACGT	3 cut(s)	76, 261, 531
HpyCH4V	TGCA	5 cut(s)	43, 785, 1003, 1109, 1138
HpyF3I	CTNAG	8 cut(s)	53, 138, 446, 456, 486, 582, 636, 1124
HpySE526I	ACGT	3 cut(s)	76, 261, 531
Hsp92I	GRCGYC	3 cut(s)	464, 531, 647
Hsp92II	CATG	6 cut(s)	382, 1018, 1109, 1193, 1221, 1585
HspAI	GCGC	8 cut(s)	149, 192, 399, 464, 509, 647, 806, 1539
KasI	GGCGCC	2 cut(s)	463, 646
KroI	GCCGGC	1 cut(s)	556
KroNI	GCCGGC	1 cut(s)	558
KspI	CCGCGG	1 cut(s)	50
Kzo9I	GATC	9 cut(s)	121, 156, 235, 941, 1099, 1256, 1319, 1528, 1569
LguI	GCTCTTC	1 cut(s)	1452
LmnI	GCTCC	6 cut(s)	126, 286, 349, 363, 1092, 1198
Lsp1109I	GCAGC	6 cut(s)	498, 815, 883, 1015, 1439, 1528
LweI	GCATC	1 cut(s)	465
MabI	ACCWGGT	2 cut(s)	1207, 1402
MaeI	CTAG	5 cut(s)	290, 714, 735, 1317, 1514
MaeII	ACGT	3 cut(s)	76, 261, 531
MaeIII	GTNAC	4 cut(s)	1150, 1213, 1223, 1309
MalI	GATC	9 cut(s)	123, 158, 237, 943, 1101, 1258, 1321, 1530, 1571
MbiI	CCGCTC	1 cut(s)	1355
MboI	GATC	9 cut(s)	121, 156, 235, 941, 1099, 1256, 1319, 1528, 1569
MflI	RGATCY	3 cut(s)	235, 941, 1319
MhlI	GDGCHC	5 cut(s)	354, 1097, 1140, 1333, 1603
MlsI	TGGCCA	1 cut(s)	173
MluCI	AATT	6 cut(s)	9, 691, 717, 816, 1034, 1141
MluNI	TGGCCA	1 cut(s)	173
Mly113I	GGCGCC	2 cut(s)	464, 647
MlyI	GAGTC	5 cut(s)	31, 76, 77, 319, 1292
MmeI	TCCRAC	5 cut(s)	59, 122, 549, 577, 1141
Mox20I	TGGCCA	1 cut(s)	173
Mph1103I	ATGCAT	1 cut(s)	1111
MroNI	GCCGGC	1 cut(s)	556
MscI	TGGCCA	1 cut(s)	173
MseI	TTAA	8 cut(s)	201, 372, 549, 666, 825, 882, 1386, 1473
Msp20I	TGGCCA	1 cut(s)	173
MspA1I	CMGCKG	3 cut(s)	49, 540, 1485
MspCI	CTTAAG	1 cut(s)	665
MspI	CCGG	8 cut(s)	15, 59, 106, 117, 355, 557, 1416, 1431
Mva1269I	GAATGC	1 cut(s)	1245
MvaI	CCWGG	6 cut(s)	112, 362, 389, 1185, 1209, 1404
MvnI	CGCG	5 cut(s)	49, 151, 341, 401, 1539
NaeI	GCCGGC	1 cut(s)	558
NarI	GGCGCC	2 cut(s)	464, 647
NciI	CCSGG	4 cut(s)	106, 117, 355, 1417
NcoI	CCATGG	1 cut(s)	378
NdeII	GATC	9 cut(s)	121, 156, 235, 941, 1099, 1256, 1319, 1528, 1569
NgoMIV	GCCGGC	1 cut(s)	556
NlaIII	CATG	6 cut(s)	382, 1018, 1109, 1193, 1221, 1585
NlaIV	GGNNCC	8 cut(s)	237, 351, 359, 465, 648, 943, 1200, 1535
NmeAIII	GCCGAG	3 cut(s)	190, 590, 1632
NmuCI	GTSAC	4 cut(s)	1150, 1213, 1223, 1309
NsiI	ATGCAT	1 cut(s)	1111
NspI	RCATGY	2 cut(s)	1109, 1221
PaeI	GCATGC	1 cut(s)	1109
PaeR7I	CTCGAG	1 cut(s)	503
PagI	TCATGA	1 cut(s)	1189
PceI	AGGCCT	1 cut(s)	1180
PciI	ACATGT	1 cut(s)	1217
PciSI	GCTCTTC	1 cut(s)	1452
PcsI	WCGNNNNNNNCGW	1 cut(s)	324
PctI	GAATGC	1 cut(s)	1245
PdiI	GCCGGC	1 cut(s)	558
PfeI	GAWTC	5 cut(s)	409, 600, 738, 1019, 1060
PflFI	GACNNNGTC	2 cut(s)	530, 533
Ple19I	CGATCG	3 cut(s)	124, 1259, 1531
PleI	GAGTC	5 cut(s)	31, 75, 77, 318, 1291
PluTI	GGCGCC	2 cut(s)	467, 650
PpsI	GAGTC	5 cut(s)	31, 75, 77, 318, 1291
Ppu21I	YACGTR	2 cut(s)	77, 262
PpuMI	RGGWCCY	1 cut(s)	385
PscI	ACATGT	1 cut(s)	1217
PshBI	ATTAAT	1 cut(s)	1386
Psp124BI	GAGCTC	1 cut(s)	1603
Psp5II	RGGWCCY	1 cut(s)	385
Psp6I	CCWGG	6 cut(s)	110, 360, 387, 1183, 1207, 1402
PspGI	CCWGG	6 cut(s)	110, 360, 387, 1183, 1207, 1402
PspN4I	GGNNCC	8 cut(s)	237, 351, 359, 465, 648, 943, 1200, 1535
PspPI	GGNCC	5 cut(s)	103, 108, 114, 385, 620
PspPPI	RGGWCCY	1 cut(s)	385
PspXI	VCTCGAGB	1 cut(s)	503
PstI	CTGCAG	1 cut(s)	787
PsuI	RGATCY	3 cut(s)	235, 941, 1319
PsyI	GACNNNGTC	2 cut(s)	530, 533
PvuI	CGATCG	3 cut(s)	124, 1259, 1531
PvuII	CAGCTG	1 cut(s)	1485
RsaI	GTAC	5 cut(s)	260, 275, 1079, 1167, 1470
RsaNI	GTAC	5 cut(s)	259, 274, 1078, 1166, 1469
SacI	GAGCTC	1 cut(s)	1603
SacII	CCGCGG	1 cut(s)	50
SapI	GCTCTTC	1 cut(s)	1452
SaqAI	TTAA	8 cut(s)	201, 372, 549, 666, 825, 882, 1386, 1473
Sau3AI	GATC	9 cut(s)	121, 156, 235, 941, 1099, 1256, 1319, 1528, 1569
Sau96I	GGNCC	5 cut(s)	103, 108, 114, 385, 620
ScaI	AGTACT	1 cut(s)	1167
SchI	GAGTC	5 cut(s)	31, 76, 77, 319, 1292
SduI	GDGCHC	5 cut(s)	354, 1097, 1140, 1333, 1603
SexAI	ACCWGGT	2 cut(s)	1207, 1402
SfaNI	GCATC	1 cut(s)	465
SfcI	CTRYAG	3 cut(s)	783, 1244, 1323
SfiI	GGCCNNNNNGGCC	1 cut(s)	170
SfoI	GGCGCC	2 cut(s)	465, 648
Sfr274I	CTCGAG	1 cut(s)	503
Sfr303I	CCGCGG	1 cut(s)	50
SgrBI	CCGCGG	1 cut(s)	50
SinI	GGWCC	2 cut(s)	385, 620
SlaI	CTCGAG	1 cut(s)	503
SmlI	CTYRAG	4 cut(s)	503, 515, 665, 684
SmoI	CTYRAG	4 cut(s)	503, 515, 665, 684
SnaBI	TACGTA	1 cut(s)	77
SphI	GCATGC	1 cut(s)	1109
Sse9I	AATT	6 cut(s)	9, 691, 717, 816, 1034, 1141
SseBI	AGGCCT	1 cut(s)	1180
SspDI	GGCGCC	2 cut(s)	463, 646
SspMI	CTAG	5 cut(s)	290, 714, 735, 1317, 1514
SstI	GAGCTC	1 cut(s)	1603
StuI	AGGCCT	1 cut(s)	1180
StyI	CCWWGG	3 cut(s)	174, 378, 945
TaaI	ACNGT	4 cut(s)	627, 877, 1075, 1294
TaiI	ACGT	3 cut(s)	79, 264, 534
TaqI	TCGA	2 cut(s)	504, 1286
TaqII	GACCGA	1 cut(s)	1293
TasI	AATT	6 cut(s)	9, 691, 717, 816, 1034, 1141
TatI	WGTACW	1 cut(s)	1165
TauI	GCSGC	6 cut(s)	52, 65, 368, 556, 1539, 1589
TfiI	GAWTC	5 cut(s)	409, 600, 738, 1019, 1060
Tru1I	TTAA	8 cut(s)	201, 372, 549, 666, 825, 882, 1386, 1473
Tru9I	TTAA	8 cut(s)	201, 372, 549, 666, 825, 882, 1386, 1473
TscAI	CASTG	2 cut(s)	715, 880
TseFI	GTSAC	4 cut(s)	1150, 1213, 1223, 1309
TseI	GCWGC	6 cut(s)	511, 803, 896, 1003, 1427, 1541
Tsp45I	GTSAC	4 cut(s)	1150, 1213, 1223, 1309
TspDTI	ATGAA	4 cut(s)	684, 873, 1147, 1533
TspGWI	ACGGA	5 cut(s)	76, 1095, 1112, 1456, 1648
TspRI	CASTG	2 cut(s)	715, 880
Tth111I	GACNNNGTC	2 cut(s)	530, 533
Vha464I	CTTAAG	1 cut(s)	665
VneI	GTGCAC	1 cut(s)	1136
VpaK11BI	GGWCC	2 cut(s)	385, 620
VspI	ATTAAT	1 cut(s)	1386
XagI	CCTNNNNNAGG	1 cut(s)	1206
XapI	RAATTY	2 cut(s)	691, 1034
XceI	RCATGY	2 cut(s)	1109, 1221
XcmI	CCANNNNNNNNNTGG	2 cut(s)	385, 750
XhoI	CTCGAG	1 cut(s)	503
XspI	CTAG	5 cut(s)	290, 714, 735, 1317, 1514
ZraI	GACGTC	1 cut(s)	532
ZrmI	AGTACT	1 cut(s)	1167
Zsp2I	ATGCAT	1 cut(s)	1111

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.