domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G10030 |
| fragaria_vesca | FvH4_5g33210 FvH4_5g33210 FvH4_5g33210 FvH4_5g33210 FvH4_5g33210 |
| malus_domestica | MD08G1214000.v1.1 MD08G1214300.v1.1 MD15G1397200.v1.1 |
| prunus_persica | Prupe.1G546000_v2.0.a1 |
| pyrus_communis | pycom08g18360 pycom08g18370 pycom08g18410 pycom15g35690 |
| rosa_chinensis | RchiOBHm_Chr7g0231591 |
| rosa_laevigata | RLG00000001408 |
| rosa_multiflora | Rmu_co8305357.1_g000001 Rmu_sc0001377.1_g000024 |
| rosa_roxburghii | Rroxscaffold_3G00229070 |
| rosa_rugosa | Rorug07G0267300 |
| rosa_samantha | Rh7AG422100 Rh7BG396400 Rh7CG442300 Rh7DG414400 |
| rosa_wichuraiana | Rw7G034800 Rw7G034870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 810 |
| AbsI | CCTCGAGG | 1 cut(s) | 927 |
| Acc36I | ACCTGC | 1 cut(s) | 426 |
| AciI | CCGC | 6 cut(s) | 5, 39, 90, 210, 421, 730 |
| AclI | AACGTT | 1 cut(s) | 74 |
| AcoI | YGGCCR | 2 cut(s) | 113, 538 |
| AcsI | RAATTY | 4 cut(s) | 163, 386, 864, 898 |
| AcuI | CTGAAG | 1 cut(s) | 1047 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 369, 729, 843 |
| AgsI | TTSAA | 6 cut(s) | 97, 257, 506, 917, 952, 1046 |
| AhlI | ACTAGT | 1 cut(s) | 499 |
| AjnI | CCWGG | 3 cut(s) | 237, 634, 649 |
| AluBI | AGCT | 9 cut(s) | 45, 134, 199, 317, 511, 584, 966, 1018, 1037 |
| AluI | AGCT | 9 cut(s) | 45, 134, 199, 317, 511, 584, 966, 1018, 1037 |
| Alw21I | GWGCWC | 1 cut(s) | 265 |
| Alw26I | GTCTC | 1 cut(s) | 887 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 406 |
| Ama87I | CYCGRG | 2 cut(s) | 525, 927 |
| AoxI | GGCC | 3 cut(s) | 113, 538, 1069 |
| ApeKI | GCWGC | 5 cut(s) | 42, 584, 1007, 1022, 1034 |
| ApoI | RAATTY | 4 cut(s) | 163, 386, 864, 898 |
| AspS9I | GGNCC | 4 cut(s) | 415, 458, 812, 1078 |
| AsuHPI | GGTGA | 1 cut(s) | 443 |
| AsuII | TTCGAA | 1 cut(s) | 14 |
| AvaI | CYCGRG | 2 cut(s) | 525, 927 |
| AvaII | GGWCC | 4 cut(s) | 415, 458, 812, 1078 |
| BalI | TGGCCA | 2 cut(s) | 115, 540 |
| BanII | GRGCYC | 1 cut(s) | 982 |
| BbsI | GAAGAC | 2 cut(s) | 104, 672 |
| Bbv12I | GWGCWC | 1 cut(s) | 265 |
| BbvCI | CCTCAGC | 1 cut(s) | 1011 |
| BbvI | GCAGC | 5 cut(s) | 54, 571, 994, 1009, 1046 |
| BccI | CCATC | 5 cut(s) | 124, 653, 678, 969, 1091 |
| BceAI | ACGGC | 1 cut(s) | 52 |
| BciT130I | CCWGG | 3 cut(s) | 239, 636, 651 |
| BcoDI | GTCTC | 1 cut(s) | 887 |
| BcuI | ACTAGT | 1 cut(s) | 499 |
| BfaI | CTAG | 7 cut(s) | 204, 338, 500, 533, 623, 749, 983 |
| BfuAI | ACCTGC | 1 cut(s) | 426 |
| BglII | AGATCT | 2 cut(s) | 881, 988 |
| BisI | GCNGC | 7 cut(s) | 6, 40, 43, 585, 1008, 1023, 1035 |
| BlsI | GCNGC | 7 cut(s) | 7, 41, 44, 586, 1009, 1024, 1036 |
| Bme1390I | CCNGG | 3 cut(s) | 239, 636, 651 |
| Bme18I | GGWCC | 4 cut(s) | 415, 458, 812, 1078 |
| BmeT110I | CYCGRG | 2 cut(s) | 525, 927 |
| BmgT120I | GGNCC | 4 cut(s) | 415, 458, 812, 1078 |
| BmiI | GGNNCC | 4 cut(s) | 361, 459, 460, 1079 |
| BmrFI | CCNGG | 3 cut(s) | 239, 636, 651 |
| BmrI | ACTGGG | 2 cut(s) | 364, 1084 |
| BmsI | GCATC | 3 cut(s) | 449, 616, 1054 |
| BmuI | ACTGGG | 2 cut(s) | 364, 1084 |
| BpiI | GAAGAC | 2 cut(s) | 104, 672 |
| BpmI | CTGGAG | 2 cut(s) | 977, 1059 |
| Bpu10I | CCTNAGC | 3 cut(s) | 303, 695, 1011 |
| Bpu14I | TTCGAA | 1 cut(s) | 14 |
| BpuEI | CTTGAG | 3 cut(s) | 586, 842, 1079 |
| BsaJI | CCNNGG | 1 cut(s) | 524 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 252, 282, 543, 573 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 369, 729, 843 |
| Bse118I | RCCGGY | 1 cut(s) | 23 |
| Bse1I | ACTGG | 5 cut(s) | 359, 605, 814, 1079, 1129 |
| Bse3DI | GCAATG | 1 cut(s) | 701 |
| BseBI | CCWGG | 3 cut(s) | 239, 636, 651 |
| BseDI | CCNNGG | 1 cut(s) | 524 |
| BseGI | GGATG | 7 cut(s) | 116, 234, 664, 670, 739, 748, 1069 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 369, 729, 843 |
| BseMI | GCAATG | 1 cut(s) | 701 |
| BseMII | CTCAG | 3 cut(s) | 60, 294, 1002 |
| BseNI | ACTGG | 5 cut(s) | 359, 605, 814, 1079, 1129 |
| BseRI | GAGGAG | 3 cut(s) | 79, 385, 1028 |
| BseXI | GCAGC | 5 cut(s) | 54, 571, 994, 1009, 1046 |
| BshFI | GGCC | 3 cut(s) | 115, 540, 1071 |
| BsiHKAI | GWGCWC | 1 cut(s) | 265 |
| BsiHKCI | CYCGRG | 2 cut(s) | 525, 927 |
| BsiSI | CCGG | 1 cut(s) | 24 |
| BslFI | GGGAC | 2 cut(s) | 168, 471 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 369, 729, 843 |
| BsmAI | GTCTC | 1 cut(s) | 887 |
| BsmFI | GGGAC | 2 cut(s) | 168, 471 |
| BsnI | GGCC | 3 cut(s) | 115, 540, 1071 |
| BsoBI | CYCGRG | 2 cut(s) | 525, 927 |
| Bsp119I | TTCGAA | 1 cut(s) | 14 |
| Bsp1286I | GDGCHC | 2 cut(s) | 265, 982 |
| Bsp143I | GATC | 4 cut(s) | 247, 853, 881, 988 |
| BspACI | CCGC | 6 cut(s) | 5, 39, 90, 210, 421, 730 |
| BspANI | GGCC | 3 cut(s) | 115, 540, 1071 |
| BspCNI | CTCAG | 3 cut(s) | 59, 295, 1003 |
| BspLI | GGNNCC | 4 cut(s) | 361, 459, 460, 1079 |
| BspMI | ACCTGC | 1 cut(s) | 426 |
| BspT104I | TTCGAA | 1 cut(s) | 14 |
| BsrDI | GCAATG | 1 cut(s) | 701 |
| BsrFI | RCCGGY | 1 cut(s) | 23 |
| BsrI | ACTGG | 5 cut(s) | 359, 605, 814, 1079, 1129 |
| BssAI | RCCGGY | 1 cut(s) | 23 |
| BssECI | CCNNGG | 1 cut(s) | 524 |
| BssMI | GATC | 4 cut(s) | 247, 853, 881, 988 |
| Bst2UI | CCWGG | 3 cut(s) | 239, 636, 651 |
| Bst4CI | ACNGT | 3 cut(s) | 469, 545, 783 |
| Bst6I | CTCTTC | 3 cut(s) | 885, 1023, 1126 |
| BstBI | TTCGAA | 1 cut(s) | 14 |
| BstC8I | GCNNGC | 5 cut(s) | 201, 582, 968, 1020, 1069 |
| BstDEI | CTNAG | 5 cut(s) | 46, 303, 512, 695, 1011 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 367 |
| BstF5I | GGATG | 7 cut(s) | 116, 234, 664, 670, 739, 748, 1069 |
| BstKTI | GATC | 4 cut(s) | 250, 856, 884, 991 |
| BstMAI | GTCTC | 1 cut(s) | 887 |
| BstMBI | GATC | 4 cut(s) | 247, 853, 881, 988 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 581, 712, 1031 |
| BstNI | CCWGG | 3 cut(s) | 239, 636, 651 |
| BstNSI | RCATGY | 1 cut(s) | 1055 |
| BstSCI | CCNGG | 3 cut(s) | 237, 634, 649 |
| BstV1I | GCAGC | 5 cut(s) | 54, 571, 994, 1009, 1046 |
| BstV2I | GAAGAC | 2 cut(s) | 104, 672 |
| BstX2I | RGATCY | 2 cut(s) | 881, 988 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 548, 775 |
| BstYI | RGATCY | 2 cut(s) | 881, 988 |
| BsuRI | GGCC | 3 cut(s) | 115, 540, 1071 |
| BtsCI | GGATG | 7 cut(s) | 116, 234, 664, 670, 739, 748, 1069 |
| BtsI | GCAGTG | 1 cut(s) | 477 |
| BtsIMutI | CAGTG | 3 cut(s) | 477, 788, 1072 |
| BveI | ACCTGC | 1 cut(s) | 426 |
| Cac8I | GCNNGC | 5 cut(s) | 201, 582, 968, 1020, 1069 |
| CaiI | CAGNNNCTG | 1 cut(s) | 406 |
| Cfr10I | RCCGGY | 1 cut(s) | 23 |
| Cfr13I | GGNCC | 4 cut(s) | 415, 458, 812, 1078 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 466, 501 |
| CviAII | CATG | 9 cut(s) | 329, 396, 428, 571, 843, 938, 1004, 1052, 1082 |
| DdeI | CTNAG | 5 cut(s) | 46, 303, 512, 695, 1011 |
| DpnI | GATC | 4 cut(s) | 249, 855, 883, 990 |
| DpnII | GATC | 4 cut(s) | 247, 853, 881, 988 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 810 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 810 |
| EaeI | YGGCCR | 2 cut(s) | 113, 538 |
| Eam1104I | CTCTTC | 3 cut(s) | 885, 1023, 1126 |
| EarI | CTCTTC | 3 cut(s) | 885, 1023, 1126 |
| Eco24I | GRGCYC | 1 cut(s) | 982 |
| Eco32I | GATATC | 1 cut(s) | 687 |
| Eco47I | GGWCC | 4 cut(s) | 415, 458, 812, 1078 |
| Eco57I | CTGAAG | 1 cut(s) | 1047 |
| Eco88I | CYCGRG | 2 cut(s) | 525, 927 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 367 |
| EcoO109I | RGGNCCY | 1 cut(s) | 458 |
| EcoRI | GAATTC | 1 cut(s) | 163 |
| EcoRII | CCWGG | 3 cut(s) | 237, 634, 649 |
| EcoRV | GATATC | 1 cut(s) | 687 |
| EcoT22I | ATGCAT | 1 cut(s) | 1053 |
| EcoT38I | GRGCYC | 1 cut(s) | 982 |
| FaeI | CATG | 9 cut(s) | 332, 399, 431, 574, 846, 941, 1007, 1055, 1085 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 249, 281 |
| FaqI | GGGAC | 2 cut(s) | 168, 471 |
| FatI | CATG | 9 cut(s) | 328, 395, 427, 570, 842, 937, 1003, 1051, 1081 |
| FauI | CCCGC | 2 cut(s) | 97, 723 |
| Fnu4HI | GCNGC | 7 cut(s) | 6, 40, 43, 585, 1008, 1023, 1035 |
| FokI | GGATG | 7 cut(s) | 103, 221, 657, 671, 746, 755, 1076 |
| FriOI | GRGCYC | 1 cut(s) | 982 |
| Fsp4HI | GCNGC | 7 cut(s) | 6, 40, 43, 585, 1008, 1023, 1035 |
| FspBI | CTAG | 7 cut(s) | 204, 338, 500, 533, 623, 749, 983 |
| GluI | GCNGC | 7 cut(s) | 6, 40, 43, 585, 1008, 1023, 1035 |
| GsuI | CTGGAG | 2 cut(s) | 977, 1059 |
| HaeIII | GGCC | 3 cut(s) | 115, 540, 1071 |
| HapII | CCGG | 1 cut(s) | 24 |
| Hin1II | CATG | 9 cut(s) | 332, 399, 431, 574, 846, 941, 1007, 1055, 1085 |
| HincII | GTYRAC | 1 cut(s) | 72 |
| HindII | GTYRAC | 1 cut(s) | 72 |
| HinfI | GANTC | 6 cut(s) | 16, 100, 124, 434, 1000, 1111 |
| HpaI | GTTAAC | 1 cut(s) | 72 |
| HpaII | CCGG | 1 cut(s) | 24 |
| HphI | GGTGA | 1 cut(s) | 443 |
| Hpy166II | GTNNAC | 3 cut(s) | 72, 415, 943 |
| Hpy188I | TCNGA | 5 cut(s) | 105, 232, 393, 755, 871 |
| Hpy188III | TCNNGA | 6 cut(s) | 485, 623, 674, 983, 994, 1094 |
| Hpy8I | GTNNAC | 3 cut(s) | 72, 415, 943 |
| HpyAV | CCTTC | 2 cut(s) | 237, 847 |
| HpyCH4III | ACNGT | 3 cut(s) | 469, 545, 783 |
| HpyCH4IV | ACGT | 1 cut(s) | 74 |
| HpyCH4V | TGCA | 7 cut(s) | 328, 587, 599, 970, 1051, 1067, 1085 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 581, 712, 1031 |
| HpyF3I | CTNAG | 5 cut(s) | 46, 303, 512, 695, 1011 |
| HpySE526I | ACGT | 1 cut(s) | 74 |
| Hsp92II | CATG | 9 cut(s) | 332, 399, 431, 574, 846, 941, 1007, 1055, 1085 |
| KflI | GGGWCCC | 1 cut(s) | 458 |
| KspAI | GTTAAC | 1 cut(s) | 72 |
| Kzo9I | GATC | 4 cut(s) | 247, 853, 881, 988 |
| LmnI | GCTCC | 3 cut(s) | 260, 963, 1015 |
| Lsp1109I | GCAGC | 5 cut(s) | 54, 571, 994, 1009, 1046 |
| LweI | GCATC | 3 cut(s) | 449, 616, 1054 |
| MaeI | CTAG | 7 cut(s) | 204, 338, 500, 533, 623, 749, 983 |
| MaeII | ACGT | 1 cut(s) | 74 |
| MaeIII | GTNAC | 4 cut(s) | 32, 140, 283, 790 |
| MalI | GATC | 4 cut(s) | 249, 855, 883, 990 |
| MboI | GATC | 4 cut(s) | 247, 853, 881, 988 |
| MflI | RGATCY | 2 cut(s) | 881, 988 |
| MhlI | GDGCHC | 2 cut(s) | 265, 982 |
| MlsI | TGGCCA | 2 cut(s) | 115, 540 |
| MluCI | AATT | 8 cut(s) | 52, 163, 386, 444, 680, 864, 898, 909 |
| MluNI | TGGCCA | 2 cut(s) | 115, 540 |
| MlyI | GAGTC | 1 cut(s) | 94 |
| MmeI | TCCRAC | 2 cut(s) | 335, 416 |
| Mox20I | TGGCCA | 2 cut(s) | 115, 540 |
| Mph1103I | ATGCAT | 1 cut(s) | 1053 |
| MscI | TGGCCA | 2 cut(s) | 115, 540 |
| MseI | TTAA | 5 cut(s) | 71, 447, 494, 518, 1107 |
| Msp20I | TGGCCA | 2 cut(s) | 115, 540 |
| MspA1I | CMGCKG | 2 cut(s) | 317, 1037 |
| MspI | CCGG | 1 cut(s) | 24 |
| MspR9I | CCNGG | 3 cut(s) | 239, 636, 651 |
| MvaI | CCWGG | 3 cut(s) | 239, 636, 651 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 581, 712, 1031 |
| NdeII | GATC | 4 cut(s) | 247, 853, 881, 988 |
| NlaIII | CATG | 9 cut(s) | 332, 399, 431, 574, 846, 941, 1007, 1055, 1085 |
| NlaIV | GGNNCC | 4 cut(s) | 361, 459, 460, 1079 |
| NmuCI | GTSAC | 2 cut(s) | 32, 140 |
| NsiI | ATGCAT | 1 cut(s) | 1053 |
| NspI | RCATGY | 1 cut(s) | 1055 |
| NspV | TTCGAA | 1 cut(s) | 14 |
| PaeR7I | CTCGAG | 1 cut(s) | 927 |
| PfeI | GAWTC | 5 cut(s) | 16, 124, 434, 1000, 1111 |
| PkrI | GCNGC | 7 cut(s) | 7, 41, 44, 586, 1009, 1024, 1036 |
| PleI | GAGTC | 1 cut(s) | 94 |
| PpsI | GAGTC | 1 cut(s) | 94 |
| PpuMI | RGGWCCY | 1 cut(s) | 458 |
| Psp1406I | AACGTT | 1 cut(s) | 74 |
| Psp5II | RGGWCCY | 1 cut(s) | 458 |
| Psp6I | CCWGG | 3 cut(s) | 237, 634, 649 |
| PspGI | CCWGG | 3 cut(s) | 237, 634, 649 |
| PspN4I | GGNNCC | 4 cut(s) | 361, 459, 460, 1079 |
| PspPI | GGNCC | 4 cut(s) | 415, 458, 812, 1078 |
| PspPPI | RGGWCCY | 1 cut(s) | 458 |
| PspXI | VCTCGAGB | 1 cut(s) | 927 |
| PstNI | CAGNNNCTG | 1 cut(s) | 406 |
| PsuI | RGATCY | 2 cut(s) | 881, 988 |
| PvuII | CAGCTG | 2 cut(s) | 317, 1037 |
| SaqAI | TTAA | 5 cut(s) | 71, 447, 494, 518, 1107 |
| SatI | GCNGC | 7 cut(s) | 6, 40, 43, 585, 1008, 1023, 1035 |
| Sau3AI | GATC | 4 cut(s) | 247, 853, 881, 988 |
| Sau96I | GGNCC | 4 cut(s) | 415, 458, 812, 1078 |
| SchI | GAGTC | 1 cut(s) | 94 |
| ScrFI | CCNGG | 3 cut(s) | 239, 636, 651 |
| SduI | GDGCHC | 2 cut(s) | 265, 982 |
| SfaNI | GCATC | 3 cut(s) | 449, 616, 1054 |
| Sfr274I | CTCGAG | 1 cut(s) | 927 |
| SfuI | TTCGAA | 1 cut(s) | 14 |
| SinI | GGWCC | 4 cut(s) | 415, 458, 812, 1078 |
| SlaI | CTCGAG | 1 cut(s) | 927 |
| SmlI | CTYRAG | 4 cut(s) | 565, 857, 927, 1058 |
| SmoI | CTYRAG | 4 cut(s) | 565, 857, 927, 1058 |
| SpeI | ACTAGT | 1 cut(s) | 499 |
| Sse9I | AATT | 8 cut(s) | 52, 163, 386, 444, 680, 864, 898, 909 |
| SsiI | CCGC | 6 cut(s) | 5, 39, 90, 210, 421, 730 |
| SspMI | CTAG | 7 cut(s) | 204, 338, 500, 533, 623, 749, 983 |
| StyD4I | CCNGG | 3 cut(s) | 237, 634, 649 |
| TaaI | ACNGT | 3 cut(s) | 469, 545, 783 |
| TaiI | ACGT | 1 cut(s) | 77 |
| TaqI | TCGA | 4 cut(s) | 14, 79, 802, 928 |
| TasI | AATT | 8 cut(s) | 52, 163, 386, 444, 680, 864, 898, 909 |
| TauI | GCSGC | 2 cut(s) | 8, 42 |
| TfiI | GAWTC | 5 cut(s) | 16, 124, 434, 1000, 1111 |
| Tru1I | TTAA | 5 cut(s) | 71, 447, 494, 518, 1107 |
| Tru9I | TTAA | 5 cut(s) | 71, 447, 494, 518, 1107 |
| TscAI | CASTG | 3 cut(s) | 484, 788, 1079 |
| TseFI | GTSAC | 2 cut(s) | 32, 140 |
| TseI | GCWGC | 5 cut(s) | 42, 584, 1007, 1022, 1034 |
| Tsp45I | GTSAC | 2 cut(s) | 32, 140 |
| TspDTI | ATGAA | 3 cut(s) | 813, 903, 992 |
| TspGWI | ACGGA | 2 cut(s) | 117, 302 |
| TspRI | CASTG | 3 cut(s) | 484, 788, 1079 |
| VpaK11BI | GGWCC | 4 cut(s) | 415, 458, 812, 1078 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 367 |
| XapI | RAATTY | 4 cut(s) | 163, 386, 864, 898 |
| XbaI | TCTAGA | 2 cut(s) | 622, 982 |
| XceI | RCATGY | 1 cut(s) | 1055 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 612 |
| XhoI | CTCGAG | 1 cut(s) | 927 |
| XspI | CTAG | 7 cut(s) | 204, 338, 500, 533, 623, 749, 983 |
| Zsp2I | ATGCAT | 1 cut(s) | 1053 |