domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G10030 |
| fragaria_vesca | FvH4_5g33210 FvH4_5g33210 FvH4_5g33210 FvH4_5g33210 FvH4_5g33210 |
| malus_domestica | MD08G1214000.v1.1 MD08G1214300.v1.1 MD15G1397200.v1.1 |
| prunus_persica | Prupe.1G546000_v2.0.a1 |
| pyrus_communis | pycom08g18360 pycom08g18370 pycom08g18410 pycom15g35690 |
| rosa_chinensis | RchiOBHm_Chr7g0231591 |
| rosa_laevigata | RLG00000001408 |
| rosa_multiflora | Rmu_co8305357.1_g000001 Rmu_sc0001377.1_g000024 |
| rosa_roxburghii | Rroxscaffold_3G00229070 |
| rosa_rugosa | Rorug07G0267300 |
| rosa_samantha | Rh7AG422100 Rh7BG396400 Rh7CG442300 Rh7DG414400 |
| rosa_wichuraiana | Rw7G034800 Rw7G034870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1644 |
| Acc36I | ACCTGC | 2 cut(s) | 577, 1263 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 268 |
| AccBSI | CCGCTC | 3 cut(s) | 224, 802, 1319 |
| AccI | GTMKAC | 1 cut(s) | 198 |
| AclWI | GGATC | 3 cut(s) | 665, 678, 950 |
| AcoI | YGGCCR | 2 cut(s) | 976, 1056 |
| AcsI | RAATTY | 6 cut(s) | 760, 934, 1170, 1223, 1698, 1732 |
| AcuI | CTGAAG | 2 cut(s) | 341, 383 |
| AcvI | CACGTG | 1 cut(s) | 677 |
| AdeI | CACNNNGTG | 1 cut(s) | 1046 |
| AfaI | GTAC | 4 cut(s) | 308, 905, 1537, 1742 |
| AgsI | TTSAA | 9 cut(s) | 68, 134, 566, 822, 934, 1094, 1314, 1589, 1659 |
| AhlI | ACTAGT | 1 cut(s) | 1336 |
| AjiI | CACGTC | 1 cut(s) | 150 |
| AjnI | CCWGG | 6 cut(s) | 261, 580, 776, 1074, 1471, 1486 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1569, 1601 |
| Alw21I | GWGCWC | 2 cut(s) | 288, 915 |
| Alw26I | GTCTC | 2 cut(s) | 529, 740 |
| AlwI | GGATC | 3 cut(s) | 665, 678, 950 |
| Ama87I | CYCGRG | 2 cut(s) | 1139, 1362 |
| AoxI | GGCC | 7 cut(s) | 126, 270, 329, 447, 976, 1056, 1294 |
| ApeKI | GCWGC | 4 cut(s) | 121, 876, 1345, 1421 |
| ApoI | RAATTY | 6 cut(s) | 760, 934, 1170, 1223, 1698, 1732 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 993, 1025 |
| AseI | ATTAAT | 1 cut(s) | 1520 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 479 |
| AspLEI | GCGC | 1 cut(s) | 881 |
| AspS9I | GGNCC | 7 cut(s) | 127, 313, 447, 1252, 1295, 1504, 1646 |
| AsuC2I | CCSGG | 2 cut(s) | 188, 927 |
| AsuHPI | GGTGA | 3 cut(s) | 40, 215, 1280 |
| AsuII | TTCGAA | 1 cut(s) | 839 |
| AvaI | CYCGRG | 2 cut(s) | 1139, 1362 |
| AvaII | GGWCC | 4 cut(s) | 313, 1252, 1504, 1646 |
| BaeGI | GKGCMC | 1 cut(s) | 1102 |
| BalI | TGGCCA | 2 cut(s) | 978, 1058 |
| BamHI | GGATCC | 1 cut(s) | 670 |
| BanII | GRGCYC | 3 cut(s) | 288, 915, 1146 |
| BbrPI | CACGTG | 1 cut(s) | 677 |
| Bbv12I | GWGCWC | 2 cut(s) | 288, 915 |
| BbvCI | CCTCAGC | 1 cut(s) | 639 |
| BbvI | GCAGC | 4 cut(s) | 133, 888, 1357, 1408 |
| BccI | CCATC | 3 cut(s) | 1490, 1515, 1672 |
| BceAI | ACGGC | 2 cut(s) | 544, 796 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1403, 1437 |
| BciT130I | CCWGG | 6 cut(s) | 263, 582, 778, 1076, 1473, 1488 |
| BcnI | CCSGG | 2 cut(s) | 188, 927 |
| BcoDI | GTCTC | 2 cut(s) | 529, 740 |
| BcuI | ACTAGT | 1 cut(s) | 1336 |
| BfaI | CTAG | 6 cut(s) | 1175, 1206, 1337, 1460, 1641, 1768 |
| BfmI | CTRYAG | 1 cut(s) | 435 |
| BfuAI | ACCTGC | 2 cut(s) | 577, 1263 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 984 |
| BisI | GCNGC | 7 cut(s) | 87, 122, 831, 864, 877, 1346, 1422 |
| BlsI | GCNGC | 7 cut(s) | 88, 123, 832, 865, 878, 1347, 1423 |
| BmcAI | AGTACT | 1 cut(s) | 1537 |
| Bme1390I | CCNGG | 8 cut(s) | 188, 263, 582, 778, 927, 1076, 1473, 1488 |
| Bme18I | GGWCC | 4 cut(s) | 313, 1252, 1504, 1646 |
| BmeT110I | CYCGRG | 2 cut(s) | 1139, 1362 |
| BmgBI | CACGTC | 1 cut(s) | 150 |
| BmgT120I | GGNCC | 7 cut(s) | 127, 313, 447, 1252, 1295, 1504, 1646 |
| BmiI | GGNNCC | 4 cut(s) | 116, 448, 672, 1297 |
| BmrFI | CCNGG | 8 cut(s) | 188, 263, 582, 778, 927, 1076, 1473, 1488 |
| BmrI | ACTGGG | 1 cut(s) | 676 |
| BmsI | GCATC | 2 cut(s) | 713, 842 |
| BmuI | ACTGGG | 1 cut(s) | 676 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1541, 1573 |
| BpmI | CTGGAG | 2 cut(s) | 240, 717 |
| Bpu10I | CCTNAGC | 1 cut(s) | 639 |
| Bpu14I | TTCGAA | 1 cut(s) | 839 |
| BpuEI | CTTGAG | 1 cut(s) | 1423 |
| BpuMI | CCSGG | 2 cut(s) | 188, 927 |
| BsaAI | YACGTR | 1 cut(s) | 677 |
| BsaJI | CCNNGG | 7 cut(s) | 186, 326, 426, 581, 728, 776, 1059 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 40, 70, 1569, 1599 |
| Bse118I | RCCGGY | 1 cut(s) | 866 |
| Bse1I | ACTGG | 3 cut(s) | 97, 671, 1442 |
| Bse3DI | GCAATG | 1 cut(s) | 1133 |
| BseBI | CCWGG | 6 cut(s) | 263, 582, 778, 1076, 1473, 1488 |
| BseDI | CCNNGG | 7 cut(s) | 186, 326, 426, 581, 728, 776, 1059 |
| BseGI | GGATG | 8 cut(s) | 182, 503, 704, 857, 1501, 1507, 1573, 1664 |
| BseMI | GCAATG | 1 cut(s) | 1133 |
| BseMII | CTCAG | 4 cut(s) | 288, 653, 977, 1293 |
| BseNI | ACTGG | 3 cut(s) | 97, 671, 1442 |
| BseRI | GAGGAG | 4 cut(s) | 24, 48, 296, 913 |
| BseSI | GKGCMC | 1 cut(s) | 1102 |
| BseXI | GCAGC | 4 cut(s) | 133, 888, 1357, 1408 |
| Bsh1285I | CGRYCG | 1 cut(s) | 168 |
| BshFI | GGCC | 7 cut(s) | 128, 272, 331, 449, 978, 1058, 1296 |
| BsiEI | CGRYCG | 1 cut(s) | 168 |
| BsiHKAI | GWGCWC | 2 cut(s) | 288, 915 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1139, 1362 |
| BsiSI | CCGG | 4 cut(s) | 188, 849, 867, 927 |
| BslFI | GGGAC | 1 cut(s) | 599 |
| BsmAI | GTCTC | 2 cut(s) | 529, 740 |
| BsmFI | GGGAC | 1 cut(s) | 599 |
| BsnI | GGCC | 7 cut(s) | 128, 272, 331, 449, 978, 1058, 1296 |
| BsoBI | CYCGRG | 2 cut(s) | 1139, 1362 |
| Bsp119I | TTCGAA | 1 cut(s) | 839 |
| Bsp1286I | GDGCHC | 4 cut(s) | 288, 915, 1102, 1146 |
| Bsp143I | GATC | 5 cut(s) | 645, 670, 942, 1084, 1687 |
| BspANI | GGCC | 7 cut(s) | 128, 272, 331, 449, 978, 1058, 1296 |
| BspCNI | CTCAG | 4 cut(s) | 287, 652, 976, 1292 |
| BspLI | GGNNCC | 4 cut(s) | 116, 448, 672, 1297 |
| BspMI | ACCTGC | 2 cut(s) | 577, 1263 |
| BspPI | GGATC | 3 cut(s) | 665, 678, 950 |
| BspT104I | TTCGAA | 1 cut(s) | 839 |
| BsrBI | CCGCTC | 3 cut(s) | 224, 802, 1319 |
| BsrDI | GCAATG | 1 cut(s) | 1133 |
| BsrFI | RCCGGY | 1 cut(s) | 866 |
| BsrI | ACTGG | 3 cut(s) | 97, 671, 1442 |
| BssAI | RCCGGY | 1 cut(s) | 866 |
| BssECI | CCNNGG | 7 cut(s) | 186, 326, 426, 581, 728, 776, 1059 |
| BssMI | GATC | 5 cut(s) | 645, 670, 942, 1084, 1687 |
| BssT1I | CCWWGG | 2 cut(s) | 426, 1059 |
| Bst2UI | CCWGG | 6 cut(s) | 263, 582, 778, 1076, 1473, 1488 |
| Bst4CI | ACNGT | 5 cut(s) | 166, 180, 203, 1382, 1617 |
| BstBAI | YACGTR | 1 cut(s) | 677 |
| BstBI | TTCGAA | 1 cut(s) | 839 |
| BstC8I | GCNNGC | 3 cut(s) | 126, 868, 1419 |
| BstDEI | CTNAG | 8 cut(s) | 274, 639, 957, 963, 1279, 1349, 1532, 1744 |
| BstF5I | GGATG | 8 cut(s) | 182, 503, 704, 857, 1501, 1507, 1573, 1664 |
| BstHHI | GCGC | 1 cut(s) | 881 |
| BstKTI | GATC | 5 cut(s) | 648, 673, 945, 1087, 1690 |
| BstMAI | GTCTC | 2 cut(s) | 529, 740 |
| BstMBI | GATC | 5 cut(s) | 645, 670, 942, 1084, 1687 |
| BstMCI | CGRYCG | 1 cut(s) | 168 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 446, 649, 701, 808, 876, 984 |
| BstNI | CCWGG | 6 cut(s) | 263, 582, 778, 1076, 1473, 1488 |
| BstSCI | CCNGG | 8 cut(s) | 186, 261, 580, 776, 925, 1074, 1471, 1486 |
| BstSFI | CTRYAG | 1 cut(s) | 435 |
| BstSLI | GKGCMC | 1 cut(s) | 1102 |
| BstV1I | GCAGC | 4 cut(s) | 133, 888, 1357, 1408 |
| BstX2I | RGATCY | 2 cut(s) | 670, 942 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1609 |
| BstYI | RGATCY | 2 cut(s) | 670, 942 |
| BsuRI | GGCC | 7 cut(s) | 128, 272, 331, 449, 978, 1058, 1296 |
| BtrI | CACGTC | 1 cut(s) | 150 |
| BtsCI | GGATG | 8 cut(s) | 182, 503, 704, 857, 1501, 1507, 1573, 1664 |
| BtsIMutI | CAGTG | 2 cut(s) | 282, 1622 |
| BveI | ACCTGC | 2 cut(s) | 577, 1263 |
| Cac8I | GCNNGC | 3 cut(s) | 126, 868, 1419 |
| CfoI | GCGC | 1 cut(s) | 881 |
| Cfr10I | RCCGGY | 1 cut(s) | 866 |
| Cfr13I | GGNCC | 7 cut(s) | 127, 313, 447, 1252, 1295, 1504, 1646 |
| CseI | GACGC | 1 cut(s) | 1472 |
| Csp6I | GTAC | 4 cut(s) | 307, 904, 1536, 1741 |
| CviAII | CATG | 4 cut(s) | 453, 1166, 1265, 1408 |
| CviQI | GTAC | 4 cut(s) | 307, 904, 1536, 1741 |
| DdeI | CTNAG | 8 cut(s) | 274, 639, 957, 963, 1279, 1349, 1532, 1744 |
| DpnI | GATC | 5 cut(s) | 647, 672, 944, 1086, 1689 |
| DpnII | GATC | 5 cut(s) | 645, 670, 942, 1084, 1687 |
| DraIII | CACNNNGTG | 1 cut(s) | 1046 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1644 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1644 |
| EaeI | YGGCCR | 2 cut(s) | 976, 1056 |
| EciI | GGCGGA | 1 cut(s) | 728 |
| Ecl136II | GAGCTC | 2 cut(s) | 286, 913 |
| Eco130I | CCWWGG | 2 cut(s) | 426, 1059 |
| Eco24I | GRGCYC | 3 cut(s) | 288, 915, 1146 |
| Eco47I | GGWCC | 4 cut(s) | 313, 1252, 1504, 1646 |
| Eco53kI | GAGCTC | 2 cut(s) | 286, 913 |
| Eco57I | CTGAAG | 2 cut(s) | 341, 383 |
| Eco72I | CACGTG | 1 cut(s) | 677 |
| Eco88I | CYCGRG | 2 cut(s) | 1139, 1362 |
| EcoICRI | GAGCTC | 2 cut(s) | 286, 913 |
| EcoO109I | RGGNCCY | 3 cut(s) | 127, 313, 1295 |
| EcoRI | GAATTC | 2 cut(s) | 934, 1170 |
| EcoRII | CCWGG | 6 cut(s) | 261, 580, 776, 1074, 1471, 1486 |
| EcoT14I | CCWWGG | 2 cut(s) | 426, 1059 |
| EcoT38I | GRGCYC | 3 cut(s) | 288, 915, 1146 |
| ErhI | CCWWGG | 2 cut(s) | 426, 1059 |
| FaeI | CATG | 4 cut(s) | 456, 1169, 1268, 1411 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1086, 1118 |
| FaqI | GGGAC | 1 cut(s) | 599 |
| FatI | CATG | 4 cut(s) | 452, 1165, 1264, 1407 |
| FauI | CCCGC | 3 cut(s) | 126, 802, 1557 |
| FblI | GTMKAC | 1 cut(s) | 198 |
| Fnu4HI | GCNGC | 7 cut(s) | 87, 122, 831, 864, 877, 1346, 1422 |
| FokI | GGATG | 8 cut(s) | 169, 510, 691, 864, 1494, 1508, 1580, 1651 |
| FriOI | GRGCYC | 3 cut(s) | 288, 915, 1146 |
| Fsp4HI | GCNGC | 7 cut(s) | 87, 122, 831, 864, 877, 1346, 1422 |
| FspBI | CTAG | 6 cut(s) | 1175, 1206, 1337, 1460, 1641, 1768 |
| GlaI | GCGC | 1 cut(s) | 880 |
| GluI | GCNGC | 7 cut(s) | 87, 122, 831, 864, 877, 1346, 1422 |
| GsuI | CTGGAG | 2 cut(s) | 240, 717 |
| HaeIII | GGCC | 7 cut(s) | 128, 272, 331, 449, 978, 1058, 1296 |
| HapII | CCGG | 4 cut(s) | 188, 849, 867, 927 |
| HgaI | GACGC | 1 cut(s) | 1472 |
| HhaI | GCGC | 1 cut(s) | 881 |
| Hin1II | CATG | 4 cut(s) | 456, 1169, 1268, 1411 |
| Hin6I | GCGC | 1 cut(s) | 879 |
| HinP1I | GCGC | 1 cut(s) | 879 |
| HincII | GTYRAC | 1 cut(s) | 199 |
| HindII | GTYRAC | 1 cut(s) | 199 |
| HpaII | CCGG | 4 cut(s) | 188, 849, 867, 927 |
| HphI | GGTGA | 3 cut(s) | 40, 215, 1280 |
| Hpy166II | GTNNAC | 5 cut(s) | 147, 199, 307, 920, 1252 |
| Hpy188I | TCNGA | 9 cut(s) | 162, 608, 758, 893, 910, 942, 1069, 1448, 1705 |
| Hpy188III | TCNNGA | 4 cut(s) | 219, 554, 1322, 1460 |
| Hpy8I | GTNNAC | 5 cut(s) | 147, 199, 307, 920, 1252 |
| Hpy99I | CGWCG | 5 cut(s) | 166, 203, 251, 293, 817 |
| HpyAV | CCTTC | 3 cut(s) | 140, 407, 1681 |
| HpyCH4III | ACNGT | 5 cut(s) | 166, 180, 203, 1382, 1617 |
| HpyCH4IV | ACGT | 4 cut(s) | 45, 149, 676, 1232 |
| HpyCH4V | TGCA | 6 cut(s) | 176, 572, 1040, 1165, 1424, 1436 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 446, 649, 701, 808, 876, 984 |
| HpyF3I | CTNAG | 8 cut(s) | 274, 639, 957, 963, 1279, 1349, 1532, 1744 |
| HpySE526I | ACGT | 4 cut(s) | 45, 149, 676, 1232 |
| Hsp92II | CATG | 4 cut(s) | 456, 1169, 1268, 1411 |
| HspAI | GCGC | 1 cut(s) | 879 |
| KroI | GCCGGC | 1 cut(s) | 866 |
| KroNI | GCCGGC | 1 cut(s) | 868 |
| Kzo9I | GATC | 5 cut(s) | 645, 670, 942, 1084, 1687 |
| LmnI | GCTCC | 5 cut(s) | 221, 283, 873, 918, 1577 |
| Lsp1109I | GCAGC | 4 cut(s) | 133, 888, 1357, 1408 |
| LweI | GCATC | 2 cut(s) | 713, 842 |
| MaeI | CTAG | 6 cut(s) | 1175, 1206, 1337, 1460, 1641, 1768 |
| MaeII | ACGT | 4 cut(s) | 45, 149, 676, 1232 |
| MaeIII | GTNAC | 5 cut(s) | 46, 658, 857, 1376, 1624 |
| MalI | GATC | 5 cut(s) | 647, 672, 944, 1086, 1689 |
| MbiI | CCGCTC | 3 cut(s) | 224, 802, 1319 |
| MboI | GATC | 5 cut(s) | 645, 670, 942, 1084, 1687 |
| MboII | GAAGA | 5 cut(s) | 218, 617, 1302, 1625, 1736 |
| MflI | RGATCY | 2 cut(s) | 670, 942 |
| MhlI | GDGCHC | 4 cut(s) | 288, 915, 1102, 1146 |
| MlsI | TGGCCA | 2 cut(s) | 978, 1058 |
| MluNI | TGGCCA | 2 cut(s) | 978, 1058 |
| MlyI | GAGTC | 2 cut(s) | 581, 955 |
| MmeI | TCCRAC | 4 cut(s) | 105, 185, 495, 1253 |
| Mox20I | TGGCCA | 2 cut(s) | 978, 1058 |
| MroNI | GCCGGC | 1 cut(s) | 866 |
| MroXI | GAANNNNTTC | 1 cut(s) | 479 |
| MscI | TGGCCA | 2 cut(s) | 978, 1058 |
| MseI | TTAA | 5 cut(s) | 375, 1284, 1331, 1520, 1758 |
| Msp20I | TGGCCA | 2 cut(s) | 978, 1058 |
| MspA1I | CMGCKG | 2 cut(s) | 643, 1154 |
| MspI | CCGG | 4 cut(s) | 188, 849, 867, 927 |
| MspR9I | CCNGG | 8 cut(s) | 188, 263, 582, 778, 927, 1076, 1473, 1488 |
| MvaI | CCWGG | 6 cut(s) | 263, 582, 778, 1076, 1473, 1488 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 446, 649, 701, 808, 876, 984 |
| NaeI | GCCGGC | 1 cut(s) | 868 |
| NciI | CCSGG | 2 cut(s) | 188, 927 |
| NdeII | GATC | 5 cut(s) | 645, 670, 942, 1084, 1687 |
| NgoMIV | GCCGGC | 1 cut(s) | 866 |
| NlaIII | CATG | 4 cut(s) | 456, 1169, 1268, 1411 |
| NlaIV | GGNNCC | 4 cut(s) | 116, 448, 672, 1297 |
| NmeAIII | GCCGAG | 2 cut(s) | 307, 319 |
| NmuCI | GTSAC | 3 cut(s) | 46, 857, 1376 |
| NspV | TTCGAA | 1 cut(s) | 839 |
| PaeR7I | CTCGAG | 1 cut(s) | 1362 |
| PdiI | GCCGGC | 1 cut(s) | 868 |
| PdmI | GAANNNNTTC | 1 cut(s) | 479 |
| PfeI | GAWTC | 8 cut(s) | 215, 252, 380, 431, 781, 841, 1271, 1596 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 268 |
| PfoI | TCCNGGA | 1 cut(s) | 1471 |
| PkrI | GCNGC | 7 cut(s) | 88, 123, 832, 865, 878, 1347, 1423 |
| PleI | GAGTC | 2 cut(s) | 581, 955 |
| PmaCI | CACGTG | 1 cut(s) | 677 |
| PmlI | CACGTG | 1 cut(s) | 677 |
| PpsI | GAGTC | 2 cut(s) | 581, 955 |
| Ppu21I | YACGTR | 1 cut(s) | 677 |
| PpuMI | RGGWCCY | 1 cut(s) | 313 |
| PshBI | ATTAAT | 1 cut(s) | 1520 |
| Psp124BI | GAGCTC | 2 cut(s) | 288, 915 |
| Psp5II | RGGWCCY | 1 cut(s) | 313 |
| Psp6I | CCWGG | 6 cut(s) | 261, 580, 776, 1074, 1471, 1486 |
| PspCI | CACGTG | 1 cut(s) | 677 |
| PspGI | CCWGG | 6 cut(s) | 261, 580, 776, 1074, 1471, 1486 |
| PspN4I | GGNNCC | 4 cut(s) | 116, 448, 672, 1297 |
| PspPI | GGNCC | 7 cut(s) | 127, 313, 447, 1252, 1295, 1504, 1646 |
| PspPPI | RGGWCCY | 1 cut(s) | 313 |
| PspXI | VCTCGAGB | 1 cut(s) | 1362 |
| PsuI | RGATCY | 2 cut(s) | 670, 942 |
| PvuII | CAGCTG | 2 cut(s) | 643, 1154 |
| RsaI | GTAC | 4 cut(s) | 308, 905, 1537, 1742 |
| RsaNI | GTAC | 4 cut(s) | 307, 904, 1536, 1741 |
| SacI | GAGCTC | 2 cut(s) | 288, 915 |
| SalI | GTCGAC | 1 cut(s) | 197 |
| SaqAI | TTAA | 5 cut(s) | 375, 1284, 1331, 1520, 1758 |
| SatI | GCNGC | 7 cut(s) | 87, 122, 831, 864, 877, 1346, 1422 |
| Sau3AI | GATC | 5 cut(s) | 645, 670, 942, 1084, 1687 |
| Sau96I | GGNCC | 7 cut(s) | 127, 313, 447, 1252, 1295, 1504, 1646 |
| ScaI | AGTACT | 1 cut(s) | 1537 |
| SchI | GAGTC | 2 cut(s) | 581, 955 |
| ScrFI | CCNGG | 8 cut(s) | 188, 263, 582, 778, 927, 1076, 1473, 1488 |
| SduI | GDGCHC | 4 cut(s) | 288, 915, 1102, 1146 |
| SfaNI | GCATC | 2 cut(s) | 713, 842 |
| SfcI | CTRYAG | 1 cut(s) | 435 |
| Sfr274I | CTCGAG | 1 cut(s) | 1362 |
| SfuI | TTCGAA | 1 cut(s) | 839 |
| SinI | GGWCC | 4 cut(s) | 313, 1252, 1504, 1646 |
| SlaI | CTCGAG | 1 cut(s) | 1362 |
| SmlI | CTYRAG | 2 cut(s) | 1362, 1402 |
| SmoI | CTYRAG | 2 cut(s) | 1362, 1402 |
| SpeI | ACTAGT | 1 cut(s) | 1336 |
| SspMI | CTAG | 6 cut(s) | 1175, 1206, 1337, 1460, 1641, 1768 |
| SstI | GAGCTC | 2 cut(s) | 288, 915 |
| StyD4I | CCNGG | 8 cut(s) | 186, 261, 580, 776, 925, 1074, 1471, 1486 |
| StyI | CCWWGG | 2 cut(s) | 426, 1059 |
| TaaI | ACNGT | 5 cut(s) | 166, 180, 203, 1382, 1617 |
| TaiI | ACGT | 4 cut(s) | 48, 152, 679, 1235 |
| TatI | WGTACW | 1 cut(s) | 1535 |
| TauI | GCSGC | 3 cut(s) | 89, 833, 866 |
| TfiI | GAWTC | 8 cut(s) | 215, 252, 380, 431, 781, 841, 1271, 1596 |
| Tru1I | TTAA | 5 cut(s) | 375, 1284, 1331, 1520, 1758 |
| Tru9I | TTAA | 5 cut(s) | 375, 1284, 1331, 1520, 1758 |
| TscAI | CASTG | 2 cut(s) | 282, 1622 |
| TseFI | GTSAC | 3 cut(s) | 46, 857, 1376 |
| TseI | GCWGC | 4 cut(s) | 121, 876, 1345, 1421 |
| Tsp45I | GTSAC | 3 cut(s) | 46, 857, 1376 |
| TspDTI | ATGAA | 3 cut(s) | 18, 678, 1737 |
| TspGWI | ACGGA | 4 cut(s) | 10, 127, 264, 905 |
| TspRI | CASTG | 2 cut(s) | 282, 1622 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 268 |
| VpaK11BI | GGWCC | 4 cut(s) | 313, 1252, 1504, 1646 |
| VspI | ATTAAT | 1 cut(s) | 1520 |
| XapI | RAATTY | 6 cut(s) | 760, 934, 1170, 1223, 1698, 1732 |
| XbaI | TCTAGA | 1 cut(s) | 1459 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1449 |
| XhoI | CTCGAG | 1 cut(s) | 1362 |
| XmiI | GTMKAC | 1 cut(s) | 198 |
| XmnI | GAANNNNTTC | 1 cut(s) | 479 |
| XspI | CTAG | 6 cut(s) | 1175, 1206, 1337, 1460, 1641, 1768 |
| ZrmI | AGTACT | 1 cut(s) | 1537 |