Prupe.1G570800_v2.0.a1

11S globulin seed storage protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
46487303 .. 46489261
1959 bp
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UTR
Exon/CDS
Intron
Prupe.1G570800.1

Sequence Viewer

Length: 1029 bp
ATGGACTTAACACCCAAGCAAGCCCAGAAGTTGTTTGAGGGAGATGGTGGAGCATATTACATTTGGTCAAGTTCAGATGTTCCAGCTCTTGTTGAGGCCAAGGTTGGTGCAGGCAAGCTTGTTCTTCAACCTCATGGCTTTGCTCTTCCTCACTATTCTGATTCTTCCAAACTGGGATATGTTCTTCAAGGTGAGGATGGATTAGTTGGAATGGTATTCCCCAACACATCAGAGGAGGTGGTGATTAAGCTTAAGAAAGGGGATGTGATACCAGTACCCCTTGGATCAGTCTCATGGTGGTTCAACAATGGAGGCTCAAACTCTGAGGAACTTGTTGTTGTCTTCTTGGGTGAAACTACCAGAGCATACATTCCTGGTCAATTCACCTATTTCCTTCTAGCTGGAACCCAAAGTTTGCTTGGAGGCTTCTCAACTGAGTTTGTGAGCAAGGCCTACAACATTACCAAAGATGAAGCAGACAAAATCACCAAGAGCCAGACTGGGGTTTTGATCATCAAGCTGGGTGAAGATGAAAAGACCAAAATACCCAAGCCCAGTGAAAACTCCACCCACAAACTTGTCCACAACATCACTTGTACAACAACAACATTGACTGAGAAGGAGTTTCCATTTCTCAAACAGGCTGGTTTAAGTGCAAGCCTGATAAAGCTTGAAGCCAATGCAATTAGCTCCCCAATTTACACAGCTGATGCTACAGTTCAAGTAGTTTATGTTGCTGGAGGGAGTGGGCAGATTCAAATTGTGGGTCTTGATGGTAAACTGGCCTTGGACACACAAGTCAAAGCTGGTGATTTGTTTGTGGTTCCAAGCTTCTTCATGGTGGCTAAACTTGCAGGGAAAAATGGATTGGAGTGTTTCTCTGTCATCACAAGTTCCCAACCTGTGCTAGAAGACTTAGCTGGCAAGACATCAGCATTGGGGGCATTATCACCAGAGATGCTACAGATAGCCCTGAATATAACTCCAGAGTTGCAGGGTCTTCTCAGCTCAAGGATTAGAAAGATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

343

Amino Acids

36.51

Weight (kDa)

5.52

Isoelectric Point (pI)

36.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 797
AclWI GGATC 1 cut(s) 292
AfaI GTAC 2 cut(s) 276, 598
AfiI CCNNNNNNNGG 1 cut(s) 502
AflII CTTAAG 1 cut(s) 251
AgsI TTSAA 6 cut(s) 128, 188, 304, 674, 722, 758
AjnI CCWGG 1 cut(s) 373
AjuI GAANNNNNNNTTGG 2 cut(s) 851, 883
Alw26I GTCTC 1 cut(s) 295
AlwI GGATC 1 cut(s) 292
AoxI GGCC 3 cut(s) 96, 450, 783
ArsI GACNNNNNNTTYG 4 cut(s) 490, 522, 751, 783
AsuHPI GGTGA 8 cut(s) 203, 253, 362, 376, 478, 536, 821, 942
BbsI GAAGAC 3 cut(s) 334, 918, 992
BccI CCATC 3 cut(s) 38, 191, 767
BciT130I CCWGG 1 cut(s) 375
BclI TGATCA 1 cut(s) 510
BcoDI GTCTC 1 cut(s) 295
BfaI CTAG 2 cut(s) 398, 908
BfmI CTRYAG 2 cut(s) 714, 962
BfrI CTTAAG 1 cut(s) 251
BglII AGATCT 1 cut(s) 1023
Bme1390I CCNGG 1 cut(s) 375
BmiI GGNNCC 2 cut(s) 406, 825
BmrFI CCNGG 1 cut(s) 375
BmrI ACTGGG 3 cut(s) 182, 510, 549
BmsI GCATC 2 cut(s) 700, 948
BmuI ACTGGG 3 cut(s) 182, 510, 549
BpiI GAAGAC 3 cut(s) 334, 918, 992
BplI GAGNNNNNCTC 2 cut(s) 863, 895
BpmI CTGGAG 2 cut(s) 759, 969
BpuEI CTTGAG 1 cut(s) 994
BsaJI CCNNGG 3 cut(s) 99, 280, 786
Bsc4I CCNNNNNNNGG 1 cut(s) 502
Bse1I ACTGG 5 cut(s) 177, 272, 505, 555, 786
BseBI CCWGG 1 cut(s) 375
BseDI CCNNGG 3 cut(s) 99, 280, 786
BseGI GGATG 2 cut(s) 202, 268
BseLI CCNNNNNNNGG 1 cut(s) 502
BseMII CTCAG 4 cut(s) 315, 426, 606, 1018
BseNI ACTGG 5 cut(s) 177, 272, 505, 555, 786
BseRI GAGGAG 1 cut(s) 248
BseYI CCCAGC 1 cut(s) 520
BsgI GTGCAG 1 cut(s) 129
BshFI GGCC 3 cut(s) 98, 452, 785
BslI CCNNNNNNNGG 1 cut(s) 502
BsmAI GTCTC 1 cut(s) 295
BsnI GGCC 3 cut(s) 98, 452, 785
Bsp1407I TGTACA 1 cut(s) 596
Bsp143I GATC 3 cut(s) 284, 510, 1023
BspANI GGCC 3 cut(s) 98, 452, 785
BspCNI CTCAG 4 cut(s) 316, 427, 607, 1017
BspLI GGNNCC 2 cut(s) 406, 825
BspPI GGATC 1 cut(s) 292
BspQI GCTCTTC 1 cut(s) 150
BspTI CTTAAG 1 cut(s) 251
BsrGI TGTACA 1 cut(s) 596
BsrI ACTGG 5 cut(s) 177, 272, 505, 555, 786
BssECI CCNNGG 3 cut(s) 99, 280, 786
BssMI GATC 3 cut(s) 284, 510, 1023
BssT1I CCWWGG 3 cut(s) 99, 280, 786
Bst2UI CCWGG 1 cut(s) 375
Bst4CI ACNGT 1 cut(s) 718
Bst6I CTCTTC 1 cut(s) 150
BstAFI CTTAAG 1 cut(s) 251
BstAUI TGTACA 1 cut(s) 596
BstC8I GCNNGC 5 cut(s) 21, 112, 116, 658, 922
BstDEI CTNAG 5 cut(s) 324, 435, 615, 916, 1004
BstF5I GGATG 2 cut(s) 202, 268
BstKTI GATC 3 cut(s) 287, 513, 1026
BstMAI GTCTC 1 cut(s) 295
BstMBI GATC 3 cut(s) 284, 510, 1023
BstMWI GCNNNNNNNGC 2 cut(s) 851, 941
BstNI CCWGG 1 cut(s) 375
BstSCI CCNGG 1 cut(s) 373
BstSFI CTRYAG 2 cut(s) 714, 962
BstV2I GAAGAC 3 cut(s) 334, 918, 992
BstX2I RGATCY 1 cut(s) 1023
BstYI RGATCY 1 cut(s) 1023
BsuRI GGCC 3 cut(s) 98, 452, 785
BtsCI GGATG 2 cut(s) 202, 268
BtsIMutI CAGTG 1 cut(s) 562
Cac8I GCNNGC 5 cut(s) 21, 112, 116, 658, 922
Csp6I GTAC 2 cut(s) 275, 597
CviAII CATG 3 cut(s) 134, 294, 838
CviQI GTAC 2 cut(s) 275, 597
DdeI CTNAG 5 cut(s) 324, 435, 615, 916, 1004
DpnI GATC 3 cut(s) 286, 512, 1025
DpnII GATC 3 cut(s) 284, 510, 1023
DrdI GACNNNNNNGTC 1 cut(s) 797
DseDI GACNNNNNNGTC 1 cut(s) 797
Eam1104I CTCTTC 1 cut(s) 150
EarI CTCTTC 1 cut(s) 150
Eco130I CCWWGG 3 cut(s) 99, 280, 786
Eco147I AGGCCT 1 cut(s) 452
EcoRII CCWGG 1 cut(s) 373
EcoT14I CCWWGG 3 cut(s) 99, 280, 786
ErhI CCWWGG 3 cut(s) 99, 280, 786
FaeI CATG 3 cut(s) 137, 297, 841
FaiI YATR 8 cut(s) 55, 135, 180, 295, 367, 732, 839, 980
FatI CATG 3 cut(s) 133, 293, 837
FbaI TGATCA 1 cut(s) 510
FokI GGATG 2 cut(s) 209, 275
FspBI CTAG 2 cut(s) 398, 908
GsaI CCCAGC 1 cut(s) 524
GsuI CTGGAG 2 cut(s) 759, 969
HaeIII GGCC 3 cut(s) 98, 452, 785
Hin1II CATG 3 cut(s) 137, 297, 841
HindIII AAGCTT 4 cut(s) 116, 248, 668, 829
HinfI GANTC 2 cut(s) 161, 754
HphI GGTGA 8 cut(s) 203, 253, 362, 376, 478, 536, 821, 942
Hpy166II GTNNAC 2 cut(s) 583, 779
Hpy188I TCNGA 5 cut(s) 76, 160, 232, 325, 1028
Hpy188III TCNNGA 2 cut(s) 770, 986
Hpy8I GTNNAC 2 cut(s) 583, 779
HpyAV CCTTC 2 cut(s) 404, 613
HpyCH4III ACNGT 1 cut(s) 718
HpyCH4V TGCA 5 cut(s) 110, 656, 683, 854, 994
HpyF10VI GCNNNNNNNGC 2 cut(s) 851, 941
HpyF3I CTNAG 5 cut(s) 324, 435, 615, 916, 1004
Hsp92II CATG 3 cut(s) 137, 297, 841
Ksp22I TGATCA 1 cut(s) 510
Kzo9I GATC 3 cut(s) 284, 510, 1023
LguI GCTCTTC 1 cut(s) 150
LmnI GCTCC 2 cut(s) 50, 695
LweI GCATC 2 cut(s) 700, 948
MaeI CTAG 2 cut(s) 398, 908
MalI GATC 3 cut(s) 286, 512, 1025
MboI GATC 3 cut(s) 284, 510, 1023
MboII GAAGA 9 cut(s) 116, 137, 156, 176, 334, 539, 826, 923, 992
MflI RGATCY 1 cut(s) 1023
MluCI AATT 4 cut(s) 380, 684, 696, 759
MmeI TCCRAC 1 cut(s) 187
MseI TTAA 4 cut(s) 8, 246, 252, 650
MspA1I CMGCKG 1 cut(s) 707
MspCI CTTAAG 1 cut(s) 251
MspR9I CCNGG 1 cut(s) 375
MvaI CCWGG 1 cut(s) 375
MwoI GCNNNNNNNGC 2 cut(s) 851, 941
NdeII GATC 3 cut(s) 284, 510, 1023
NlaIII CATG 3 cut(s) 137, 297, 841
NlaIV GGNNCC 2 cut(s) 406, 825
PceI AGGCCT 1 cut(s) 452
PciSI GCTCTTC 1 cut(s) 150
PfeI GAWTC 2 cut(s) 161, 754
Psp6I CCWGG 1 cut(s) 373
PspFI CCCAGC 1 cut(s) 520
PspGI CCWGG 1 cut(s) 373
PspN4I GGNNCC 2 cut(s) 406, 825
PsuI RGATCY 1 cut(s) 1023
PvuII CAGCTG 1 cut(s) 707
RsaI GTAC 2 cut(s) 276, 598
RsaNI GTAC 2 cut(s) 275, 597
SapI GCTCTTC 1 cut(s) 150
SaqAI TTAA 4 cut(s) 8, 246, 252, 650
Sau3AI GATC 3 cut(s) 284, 510, 1023
ScrFI CCNGG 1 cut(s) 375
SfaNI GCATC 2 cut(s) 700, 948
SfcI CTRYAG 2 cut(s) 714, 962
SmlI CTYRAG 2 cut(s) 251, 1009
SmoI CTYRAG 2 cut(s) 251, 1009
Sse9I AATT 4 cut(s) 380, 684, 696, 759
SseBI AGGCCT 1 cut(s) 452
SspMI CTAG 2 cut(s) 398, 908
StuI AGGCCT 1 cut(s) 452
StyD4I CCNGG 1 cut(s) 373
StyI CCWWGG 3 cut(s) 99, 280, 786
TaaI ACNGT 1 cut(s) 718
TasI AATT 4 cut(s) 380, 684, 696, 759
TatI WGTACW 1 cut(s) 596
TfiI GAWTC 2 cut(s) 161, 754
Tru1I TTAA 4 cut(s) 8, 246, 252, 650
Tru9I TTAA 4 cut(s) 8, 246, 252, 650
TscAI CASTG 1 cut(s) 562
TspDTI ATGAA 3 cut(s) 486, 546, 826
TspRI CASTG 1 cut(s) 562
Vha464I CTTAAG 1 cut(s) 251
XcmI CCANNNNNNNNNTGG 1 cut(s) 416
XspI CTAG 2 cut(s) 398, 908
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.