No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g25611 |
| malus_domestica | MD07G1004800.v1.1 |
| prunus_persica | Prupe.2G006100_v2.0.a1 Prupe.2G006200_v2.0.a1 Prupe.2G006300_v2.0.a1 Prupe.2G006400_v2.0.a1 Prupe.2G006700_v2.0.a1 Prupe.2G006800_v2.0.a1 Prupe.2G006900_v2.0.a1 |
| pyrus_communis | pycom02g26560 pycom07g00370 |
| rosa_chinensis | RchiOBHm_Chr1g0314271 RchiOBHm_Chr1g0314291 RchiOBHm_Chr2g0123781 RchiOBHm_Chr2g0123791 RchiOBHm_Chr2g0123801 RchiOBHm_Chr2g0123821 RchiOBHm_Chr2g0123871 RchiOBHm_Chr2g0123881 RchiOBHm_Chr2g0123891 |
| rosa_laevigata | RLG00000018776 |
| rosa_multiflora | Rmu_sc0003270.1_g000037 |
| rosa_roxburghii | Rroxscaffold_2G00120260 Rroxscaffold_2G00120270 Rroxscaffold_2G00120290 Rroxscaffold_2G00120310 Rroxscaffold_2G00120320 Rroxscaffold_2G00120330 Rroxscaffold_2G00120340 Rroxscaffold_4G00331990 |
| rosa_rugosa | Rorug02G0248000 Rorug02G0248200 |
| rosa_samantha | Rh2BG315500 Rh2CG293300 Rh2DG330700 |
| rosa_wichuraiana | Rw1G000430 Rw2G024630 Rw2G024640 Rw2G024650 Rw2G024670 Rw2G024680 Rw2G024700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AluBI | AGCT | 1 cut(s) | 17 |
| AluI | AGCT | 1 cut(s) | 17 |
| Alw26I | GTCTC | 1 cut(s) | 154 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 29 |
| BbsI | GAAGAC | 1 cut(s) | 117 |
| BcoDI | GTCTC | 1 cut(s) | 154 |
| BmrI | ACTGGG | 1 cut(s) | 156 |
| BmsI | GCATC | 1 cut(s) | 58 |
| BmuI | ACTGGG | 1 cut(s) | 156 |
| BpiI | GAAGAC | 1 cut(s) | 117 |
| BpmI | CTGGAG | 2 cut(s) | 93, 105 |
| Bse1I | ACTGG | 1 cut(s) | 162 |
| BseMII | CTCAG | 1 cut(s) | 27 |
| BseNI | ACTGG | 1 cut(s) | 162 |
| BsmAI | GTCTC | 1 cut(s) | 154 |
| BspCNI | CTCAG | 1 cut(s) | 26 |
| BspQI | GCTCTTC | 1 cut(s) | 85 |
| BsrI | ACTGG | 1 cut(s) | 162 |
| Bst6I | CTCTTC | 1 cut(s) | 85 |
| BstDEI | CTNAG | 1 cut(s) | 13 |
| BstMAI | GTCTC | 1 cut(s) | 154 |
| BstV2I | GAAGAC | 1 cut(s) | 117 |
| CseI | GACGC | 1 cut(s) | 84 |
| CviAII | CATG | 1 cut(s) | 34 |
| CviJI | RGCY | 3 cut(s) | 5, 17, 78 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 17, 78 |
| DdeI | CTNAG | 1 cut(s) | 13 |
| Eam1104I | CTCTTC | 1 cut(s) | 85 |
| EarI | CTCTTC | 1 cut(s) | 85 |
| FaeI | CATG | 1 cut(s) | 37 |
| FaiI | YATR | 1 cut(s) | 35 |
| FatI | CATG | 1 cut(s) | 33 |
| GsuI | CTGGAG | 2 cut(s) | 93, 105 |
| HgaI | GACGC | 1 cut(s) | 84 |
| Hin1II | CATG | 1 cut(s) | 37 |
| HinfI | GANTC | 1 cut(s) | 104 |
| Hpy188I | TCNGA | 2 cut(s) | 64, 133 |
| Hpy188III | TCNNGA | 1 cut(s) | 84 |
| HpyCH4V | TGCA | 1 cut(s) | 114 |
| HpyF3I | CTNAG | 1 cut(s) | 13 |
| Hsp92II | CATG | 1 cut(s) | 37 |
| LguI | GCTCTTC | 1 cut(s) | 85 |
| LpnPI | CCDG | 3 cut(s) | 57, 69, 175 |
| LweI | GCATC | 1 cut(s) | 58 |
| MaeIII | GTNAC | 1 cut(s) | 164 |
| MboII | GAAGA | 2 cut(s) | 72, 117 |
| MluCI | AATT | 1 cut(s) | 25 |
| MnlI | CCTC | 2 cut(s) | 49, 68 |
| MroXI | GAANNNNTTC | 1 cut(s) | 29 |
| NlaIII | CATG | 1 cut(s) | 37 |
| PciSI | GCTCTTC | 1 cut(s) | 85 |
| PdmI | GAANNNNTTC | 1 cut(s) | 29 |
| PfeI | GAWTC | 1 cut(s) | 104 |
| SapI | GCTCTTC | 1 cut(s) | 85 |
| SetI | ASST | 1 cut(s) | 19 |
| SfaNI | GCATC | 1 cut(s) | 58 |
| SgeI | CNNG | 5 cut(s) | 46, 68, 84, 96, 174 |
| Sse9I | AATT | 1 cut(s) | 25 |
| TasI | AATT | 1 cut(s) | 25 |
| TfiI | GAWTC | 1 cut(s) | 104 |
| TspDTI | ATGAA | 2 cut(s) | 22, 117 |
| XmnI | GAANNNNTTC | 1 cut(s) | 29 |