Prupe.2G048100_v2.0.a1

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
5522156 .. 5523190
1035 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G048100.1

Sequence Viewer

Length: 1035 bp
ATGGCAGAAGAATCCAGAGTAGAACGTCTGAGCTCTACTTCTGAGGCTTCTAACATCTCAGCCGCCTCGGATGGCCCACCACCAACACAAAAAGATGGCCCTGAAAATCTTGACCAGAAAATGAAGATGAAATTGAAAGAGAAAATTGTCATCGATGATTCTGATGACGATGATACTCAACAACCCCGACAACAACCACCGCCACCACCAGTCGTCAGATCATCGTCGTCGCCATCACCAAGTTCTCGGCTCCGACTTGATCTGAAGCTTTGCAATGACAACTCTGCTCGTGGGTCAGGGTCGACGTCGAGGCTTGAACTCAGCCTGTTCAACACTTCGAACCCAGGTTCTTCCAACCCAGGCTCATCAAATCCTGTCTCAAGGTACTCTCAACCCAATGAGACCACAGATGAGAACCCACGTGGCAGTGATGACAAAAGATCCCAACCTAGGGTTTTCACATGCAACTTTTGCAAGAGGGAGTTCTCTACTTCCCAAGCATTGGGAGGGCATCAAAACGCTCACAAACAAGAGCGCGCCTTAGCCAAAAGGCGGCAAGGAGGACTTGAAAATATGGGAGGTGTCTTGGGACATTCACCCTTTTCTTATTACAACCCATATTCAAGTTTCTCATCACCCTCTCTCTATGGATCTTTCAATAGATCTCTTGGGGTTAGGATGGATTCCATGATTCACAAGCCTTCTTATCCATGGTCCTCAACCCCCGGCTTCGGGCGGTTTGGCCATGGTTCTGGGGCATGGTCATCTAGGGCAGGAGGCCTCCTGAACTTCCAATCCACTATTGATAGGCTCAACTTGGAGGGCCTTCACGCTAATGCTCCCAGTGGAATATTAGGGCATCCAGGAACCAGTAGCGCTCCAAGGTTTGATCAGGAAATCAGTGCTGTTCGCAACTTTGGTGGTTCGAGTTCGAATTTTGGAATCAACAGGCCATTCCTTGGTGATCTTATCCGCCGCGAGCCTCCAACATCCGATACCGATGCTGCTGGCCTAGATCTGTCTCTTAAGCTTTAG

Protein Analysis

345

Amino Acids

37.16

Weight (kDa)

8.73

Isoelectric Point (pI)

60.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 308
AccB7I CCANNNNNTGG 2 cut(s) 502, 959
AccI GTMKAC 1 cut(s) 302
AccII CGCG 2 cut(s) 537, 978
AciI CCGC 6 cut(s) 63, 200, 553, 736, 973, 976
AclWI GGATC 2 cut(s) 435, 658
AcoI YGGCCR 1 cut(s) 742
AcsI RAATTY 1 cut(s) 934
AcuI CTGAAG 1 cut(s) 284
AcvI CACGTG 1 cut(s) 422
AcyI GRCGYC 1 cut(s) 305
AfaI GTAC 1 cut(s) 386
AfeI AGCGCT 1 cut(s) 877
AfiI CCNNNNNNNGG 7 cut(s) 450, 451, 502, 552, 731, 732, 959
AflII CTTAAG 1 cut(s) 1025
AgsI TTSAA 6 cut(s) 136, 317, 331, 569, 624, 658
AjnI CCWGG 3 cut(s) 343, 358, 862
AloI GAACNNNNNNTCC 2 cut(s) 779, 811
AluBI AGCT 3 cut(s) 33, 268, 1030
AluI AGCT 3 cut(s) 33, 268, 1030
Alw21I GWGCWC 1 cut(s) 35
Alw26I GTCTC 3 cut(s) 382, 395, 1026
AlwI GGATC 2 cut(s) 435, 658
Aor51HI AGCGCT 1 cut(s) 877
AoxI GGCC 7 cut(s) 73, 97, 742, 778, 823, 950, 1009
ApeKI GCWGC 1 cut(s) 1004
ApoI RAATTY 1 cut(s) 934
AspA2I CCTAGG 1 cut(s) 449
AspLEI GCGC 3 cut(s) 537, 539, 878
AspS9I GGNCC 4 cut(s) 74, 98, 714, 823
AsuC2I CCSGG 1 cut(s) 726
AsuHPI GGTGA 4 cut(s) 228, 588, 627, 974
AsuII TTCGAA 2 cut(s) 338, 932
AvaII GGWCC 1 cut(s) 714
AvrII CCTAGG 1 cut(s) 449
BalI TGGCCA 1 cut(s) 744
BanII GRGCYC 1 cut(s) 35
BauI CACGAG 1 cut(s) 288
BbrPI CACGTG 1 cut(s) 422
Bbv12I GWGCWC 1 cut(s) 35
BbvI GCAGC 1 cut(s) 991
BccI CCATC 4 cut(s) 65, 89, 241, 673
BcgI CGANNNNNNTGC 2 cut(s) 983, 1017
BciT130I CCWGG 3 cut(s) 345, 360, 864
BclI TGATCA 1 cut(s) 889
BcnI CCSGG 1 cut(s) 726
BcoDI GTCTC 3 cut(s) 382, 395, 1026
BfaI CTAG 3 cut(s) 450, 768, 1013
BfoI RGCGCY 1 cut(s) 879
BfrI CTTAAG 1 cut(s) 1025
BglII AGATCT 2 cut(s) 662, 1015
BisI GCNGC 4 cut(s) 63, 554, 976, 1005
BlnI CCTAGG 1 cut(s) 449
BlsI GCNGC 4 cut(s) 64, 555, 977, 1006
Bme1390I CCNGG 4 cut(s) 345, 360, 726, 864
Bme18I GGWCC 1 cut(s) 714
BmgT120I GGNCC 4 cut(s) 74, 98, 714, 823
BmiI GGNNCC 2 cut(s) 251, 868
BmrFI CCNGG 4 cut(s) 345, 360, 726, 864
BmrI ACTGGG 1 cut(s) 837
BmsI GCATC 3 cut(s) 520, 868, 991
BmuI ACTGGG 1 cut(s) 837
Bpu10I CCTNAGC 1 cut(s) 541
Bpu14I TTCGAA 2 cut(s) 338, 932
BpuEI CTTGAG 1 cut(s) 364
BpuMI CCSGG 1 cut(s) 726
Bsa29I ATCGAT 1 cut(s) 153
BsaAI YACGTR 1 cut(s) 422
BsaHI GRCGYC 1 cut(s) 305
BsaI GGTCTC 1 cut(s) 395
BsaJI CCNNGG 9 cut(s) 66, 343, 358, 449, 710, 724, 745, 881, 958
Bsc4I CCNNNNNNNGG 7 cut(s) 450, 451, 502, 552, 731, 732, 959
Bse1I ACTGG 3 cut(s) 209, 843, 870
Bse3DI GCAATG 1 cut(s) 280
BseBI CCWGG 3 cut(s) 345, 360, 864
BseCI ATCGAT 1 cut(s) 153
BseDI CCNNGG 9 cut(s) 66, 343, 358, 449, 710, 724, 745, 881, 958
BseGI GGATG 4 cut(s) 76, 684, 859, 989
BseLI CCNNNNNNNGG 7 cut(s) 450, 451, 502, 552, 731, 732, 959
BseMI GCAATG 1 cut(s) 280
BseMII CTCAG 4 cut(s) 20, 33, 72, 334
BseNI ACTGG 3 cut(s) 209, 843, 870
BsePI GCGCGC 1 cut(s) 535
BseXI GCAGC 1 cut(s) 991
Bsh1236I CGCG 2 cut(s) 537, 978
BshFI GGCC 7 cut(s) 75, 99, 744, 780, 825, 952, 1011
BshVI ATCGAT 1 cut(s) 153
BsiHKAI GWGCWC 1 cut(s) 35
BsiSI CCGG 1 cut(s) 726
BslFI GGGAC 1 cut(s) 603
BslI CCNNNNNNNGG 7 cut(s) 450, 451, 502, 552, 731, 732, 959
BsmAI GTCTC 3 cut(s) 382, 395, 1026
BsmFI GGGAC 1 cut(s) 603
BsnI GGCC 7 cut(s) 75, 99, 744, 780, 825, 952, 1011
Bso31I GGTCTC 1 cut(s) 395
Bsp119I TTCGAA 2 cut(s) 338, 932
Bsp1286I GDGCHC 1 cut(s) 35
Bsp143I GATC 8 cut(s) 218, 259, 440, 650, 662, 889, 964, 1015
Bsp19I CCATGG 2 cut(s) 710, 745
BspACI CCGC 6 cut(s) 63, 200, 553, 736, 973, 976
BspANI GGCC 7 cut(s) 75, 99, 744, 780, 825, 952, 1011
BspCNI CTCAG 4 cut(s) 21, 34, 71, 333
BspDI ATCGAT 1 cut(s) 153
BspFNI CGCG 2 cut(s) 537, 978
BspLI GGNNCC 2 cut(s) 251, 868
BspPI GGATC 2 cut(s) 435, 658
BspT104I TTCGAA 2 cut(s) 338, 932
BspTI CTTAAG 1 cut(s) 1025
BspTNI GGTCTC 1 cut(s) 395
BsrDI GCAATG 1 cut(s) 280
BsrI ACTGG 3 cut(s) 209, 843, 870
BssECI CCNNGG 9 cut(s) 66, 343, 358, 449, 710, 724, 745, 881, 958
BssHII GCGCGC 1 cut(s) 535
BssMI GATC 8 cut(s) 218, 259, 440, 650, 662, 889, 964, 1015
BssNI GRCGYC 1 cut(s) 305
BssSI CACGAG 1 cut(s) 288
BssT1I CCWWGG 5 cut(s) 449, 710, 745, 881, 958
Bst2BI CACGAG 1 cut(s) 288
Bst2UI CCWGG 3 cut(s) 345, 360, 864
BstACI GRCGYC 1 cut(s) 305
BstAFI CTTAAG 1 cut(s) 1025
BstAPI GCANNNNNTGC 1 cut(s) 471
BstBAI YACGTR 1 cut(s) 422
BstBI TTCGAA 2 cut(s) 338, 932
BstC8I GCNNGC 3 cut(s) 537, 980, 1009
BstDEI CTNAG 5 cut(s) 29, 42, 58, 320, 541
BstDSI CCRYGG 2 cut(s) 710, 745
BstF5I GGATG 4 cut(s) 76, 684, 859, 989
BstFNI CGCG 2 cut(s) 537, 978
BstH2I RGCGCY 1 cut(s) 879
BstHHI GCGC 3 cut(s) 537, 539, 878
BstKTI GATC 8 cut(s) 221, 262, 443, 653, 665, 892, 967, 1018
BstMAI GTCTC 3 cut(s) 382, 395, 1026
BstMBI GATC 8 cut(s) 218, 259, 440, 650, 662, 889, 964, 1015
BstMWI GCNNNNNNNGC 1 cut(s) 471
BstNI CCWGG 3 cut(s) 345, 360, 864
BstNSI RCATGY 1 cut(s) 465
BstSCI CCNGG 4 cut(s) 343, 358, 724, 862
BstUI CGCG 2 cut(s) 537, 978
BstV1I GCAGC 1 cut(s) 991
BstX2I RGATCY 4 cut(s) 440, 650, 662, 1015
BstXI CCANNNNNNTGG 1 cut(s) 752
BstYI RGATCY 4 cut(s) 440, 650, 662, 1015
Bsu15I ATCGAT 1 cut(s) 153
BsuRI GGCC 7 cut(s) 75, 99, 744, 780, 825, 952, 1011
BsuTUI ATCGAT 1 cut(s) 153
BtgI CCRYGG 2 cut(s) 710, 745
BtsCI GGATG 4 cut(s) 76, 684, 859, 989
BtsI GCAGTG 1 cut(s) 433
BtsIMutI CAGTG 3 cut(s) 433, 850, 907
Cac8I GCNNGC 3 cut(s) 537, 980, 1009
CfoI GCGC 3 cut(s) 537, 539, 878
Cfr13I GGNCC 4 cut(s) 74, 98, 714, 823
ClaI ATCGAT 1 cut(s) 153
Csp6I GTAC 1 cut(s) 385
CspCI CAANNNNNGTGG 2 cut(s) 901, 936
CviAII CATG 5 cut(s) 462, 688, 711, 746, 759
CviQI GTAC 1 cut(s) 385
DdeI CTNAG 5 cut(s) 29, 42, 58, 320, 541
DpnI GATC 8 cut(s) 220, 261, 442, 652, 664, 891, 966, 1017
DpnII GATC 8 cut(s) 218, 259, 440, 650, 662, 889, 964, 1015
EaeI YGGCCR 1 cut(s) 742
EciI GGCGGA 1 cut(s) 962
Ecl136II GAGCTC 1 cut(s) 33
Eco130I CCWWGG 5 cut(s) 449, 710, 745, 881, 958
Eco147I AGGCCT 1 cut(s) 780
Eco24I GRGCYC 1 cut(s) 35
Eco31I GGTCTC 1 cut(s) 395
Eco47I GGWCC 1 cut(s) 714
Eco47III AGCGCT 1 cut(s) 877
Eco53kI GAGCTC 1 cut(s) 33
Eco57I CTGAAG 1 cut(s) 284
Eco72I CACGTG 1 cut(s) 422
EcoICRI GAGCTC 1 cut(s) 33
EcoO109I RGGNCCY 1 cut(s) 823
EcoRII CCWGG 3 cut(s) 343, 358, 862
EcoT14I CCWWGG 5 cut(s) 449, 710, 745, 881, 958
EcoT38I GRGCYC 1 cut(s) 35
ErhI CCWWGG 5 cut(s) 449, 710, 745, 881, 958
FaeI CATG 5 cut(s) 465, 691, 714, 749, 762
FaiI YATR 8 cut(s) 463, 575, 619, 648, 689, 712, 747, 760
FalI AAGNNNNNCTT 2 cut(s) 549, 581
FaqI GGGAC 1 cut(s) 603
FatI CATG 5 cut(s) 461, 687, 710, 745, 758
FbaI TGATCA 1 cut(s) 889
FblI GTMKAC 1 cut(s) 302
Fnu4HI GCNGC 4 cut(s) 63, 554, 976, 1005
FokI GGATG 4 cut(s) 83, 691, 846, 976
FriOI GRGCYC 1 cut(s) 35
Fsp4HI GCNGC 4 cut(s) 63, 554, 976, 1005
FspBI CTAG 3 cut(s) 450, 768, 1013
GlaI GCGC 3 cut(s) 536, 538, 877
GluI GCNGC 4 cut(s) 63, 554, 976, 1005
HaeII RGCGCY 1 cut(s) 879
HaeIII GGCC 7 cut(s) 75, 99, 744, 780, 825, 952, 1011
HapII CCGG 1 cut(s) 726
HhaI GCGC 3 cut(s) 537, 539, 878
Hin1I GRCGYC 1 cut(s) 305
Hin1II CATG 5 cut(s) 465, 691, 714, 749, 762
Hin6I GCGC 3 cut(s) 535, 537, 876
HinP1I GCGC 3 cut(s) 535, 537, 876
HincII GTYRAC 1 cut(s) 303
HindII GTYRAC 1 cut(s) 303
HindIII AAGCTT 2 cut(s) 266, 1028
HinfI GANTC 5 cut(s) 11, 158, 683, 691, 942
HpaII CCGG 1 cut(s) 726
HphI GGTGA 4 cut(s) 228, 588, 627, 974
Hpy166II GTNNAC 1 cut(s) 303
Hpy188I TCNGA 8 cut(s) 30, 43, 70, 163, 218, 254, 264, 994
Hpy188III TCNNGA 4 cut(s) 15, 110, 784, 893
Hpy8I GTNNAC 1 cut(s) 303
Hpy99I CGWCG 4 cut(s) 229, 232, 307, 310
HpyAV CCTTC 2 cut(s) 711, 836
HpyCH4IV ACGT 3 cut(s) 25, 305, 421
HpyCH4V TGCA 3 cut(s) 273, 465, 474
HpyF10VI GCNNNNNNNGC 1 cut(s) 471
HpyF3I CTNAG 5 cut(s) 29, 42, 58, 320, 541
HpySE526I ACGT 3 cut(s) 25, 305, 421
Hsp92I GRCGYC 1 cut(s) 305
Hsp92II CATG 5 cut(s) 465, 691, 714, 749, 762
HspAI GCGC 3 cut(s) 535, 537, 876
Ksp22I TGATCA 1 cut(s) 889
Kzo9I GATC 8 cut(s) 218, 259, 440, 650, 662, 889, 964, 1015
LmnI GCTCC 3 cut(s) 255, 844, 883
Lsp1109I GCAGC 1 cut(s) 991
LweI GCATC 3 cut(s) 520, 868, 991
MaeI CTAG 3 cut(s) 450, 768, 1013
MaeII ACGT 3 cut(s) 25, 305, 421
MalI GATC 8 cut(s) 220, 261, 442, 652, 664, 891, 966, 1017
MboI GATC 8 cut(s) 218, 259, 440, 650, 662, 889, 964, 1015
MboII GAAGA 3 cut(s) 20, 136, 342
MflI RGATCY 4 cut(s) 440, 650, 662, 1015
MhlI GDGCHC 1 cut(s) 35
MlsI TGGCCA 1 cut(s) 744
MluCI AATT 3 cut(s) 131, 144, 934
MluNI TGGCCA 1 cut(s) 744
MmeI TCCRAC 3 cut(s) 277, 378, 1010
Mox20I TGGCCA 1 cut(s) 744
MscI TGGCCA 1 cut(s) 744
MseI TTAA 1 cut(s) 1026
MslI CAYNNNNRTG 1 cut(s) 834
Msp20I TGGCCA 1 cut(s) 744
MspCI CTTAAG 1 cut(s) 1025
MspI CCGG 1 cut(s) 726
MspR9I CCNGG 4 cut(s) 345, 360, 726, 864
MvaI CCWGG 3 cut(s) 345, 360, 864
MvnI CGCG 2 cut(s) 537, 978
MwoI GCNNNNNNNGC 1 cut(s) 471
NciI CCSGG 1 cut(s) 726
NcoI CCATGG 2 cut(s) 710, 745
NdeII GATC 8 cut(s) 218, 259, 440, 650, 662, 889, 964, 1015
NlaIII CATG 5 cut(s) 465, 691, 714, 749, 762
NlaIV GGNNCC 2 cut(s) 251, 868
NmeAIII GCCGAG 1 cut(s) 226
NspI RCATGY 1 cut(s) 465
NspV TTCGAA 2 cut(s) 338, 932
PauI GCGCGC 1 cut(s) 535
PceI AGGCCT 1 cut(s) 780
PfeI GAWTC 5 cut(s) 11, 158, 683, 691, 942
PflMI CCANNNNNTGG 2 cut(s) 502, 959
PfoI TCCNGGA 1 cut(s) 862
PkrI GCNGC 4 cut(s) 64, 555, 977, 1006
PmaCI CACGTG 1 cut(s) 422
PmlI CACGTG 1 cut(s) 422
Ppu21I YACGTR 1 cut(s) 422
Psp124BI GAGCTC 1 cut(s) 35
Psp6I CCWGG 3 cut(s) 343, 358, 862
PspCI CACGTG 1 cut(s) 422
PspGI CCWGG 3 cut(s) 343, 358, 862
PspN4I GGNNCC 2 cut(s) 251, 868
PspPI GGNCC 4 cut(s) 74, 98, 714, 823
PsuI RGATCY 4 cut(s) 440, 650, 662, 1015
PteI GCGCGC 1 cut(s) 535
RsaI GTAC 1 cut(s) 386
RsaNI GTAC 1 cut(s) 385
RseI CAYNNNNRTG 1 cut(s) 834
SacI GAGCTC 1 cut(s) 35
SalI GTCGAC 1 cut(s) 301
SaqAI TTAA 1 cut(s) 1026
SatI GCNGC 4 cut(s) 63, 554, 976, 1005
Sau3AI GATC 8 cut(s) 218, 259, 440, 650, 662, 889, 964, 1015
Sau96I GGNCC 4 cut(s) 74, 98, 714, 823
ScrFI CCNGG 4 cut(s) 345, 360, 726, 864
SduI GDGCHC 1 cut(s) 35
SfaNI GCATC 3 cut(s) 520, 868, 991
SfuI TTCGAA 2 cut(s) 338, 932
SinI GGWCC 1 cut(s) 714
SmiMI CAYNNNNRTG 1 cut(s) 834
SmlI CTYRAG 2 cut(s) 379, 1025
SmoI CTYRAG 2 cut(s) 379, 1025
Sse9I AATT 3 cut(s) 131, 144, 934
SseBI AGGCCT 1 cut(s) 780
SsiI CCGC 6 cut(s) 63, 200, 553, 736, 973, 976
SspI AATATT 1 cut(s) 852
SspMI CTAG 3 cut(s) 450, 768, 1013
SstI GAGCTC 1 cut(s) 35
StuI AGGCCT 1 cut(s) 780
StyD4I CCNGG 4 cut(s) 343, 358, 724, 862
StyI CCWWGG 5 cut(s) 449, 710, 745, 881, 958
TaiI ACGT 3 cut(s) 28, 308, 424
TaqI TCGA 6 cut(s) 153, 302, 308, 338, 926, 932
TasI AATT 3 cut(s) 131, 144, 934
TauI GCSGC 3 cut(s) 65, 556, 978
TfiI GAWTC 5 cut(s) 11, 158, 683, 691, 942
Tru1I TTAA 1 cut(s) 1026
Tru9I TTAA 1 cut(s) 1026
TscAI CASTG 3 cut(s) 433, 850, 907
TseI GCWGC 1 cut(s) 1004
TspDTI ATGAA 2 cut(s) 137, 143
TspRI CASTG 3 cut(s) 433, 850, 907
Van91I CCANNNNNTGG 2 cut(s) 502, 959
Vha464I CTTAAG 1 cut(s) 1025
VpaK11BI GGWCC 1 cut(s) 714
XapI RAATTY 1 cut(s) 934
XceI RCATGY 1 cut(s) 465
XmaJI CCTAGG 1 cut(s) 449
XmiI GTMKAC 1 cut(s) 302
XspI CTAG 3 cut(s) 450, 768, 1013
ZraI GACGTC 1 cut(s) 306
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.