ZINC FINGER protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g12011 FvH4_7g04251 |
| malus_domestica | MD07G1042100.v1.1 |
| prunus_persica | Prupe.2G048100_v2.0.a1 Prupe.2G048400_v2.0.a1 |
| pyrus_communis | pycom02g23410 |
| rosa_chinensis | RchiOBHm_Chr1g0328791 |
| rosa_laevigata | RLG00000008539 RLG00000029918 |
| rosa_multiflora | Rmu_co8270465.1_g000001 Rmu_sc0000652.1_g000003 Rmu_sc0004241.1_g000001 Rmu_sc0013419.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00321370 Rroxscaffold_5G00354150 |
| rosa_rugosa | Rorug01G0075900 Rorug04G0095500 |
| rosa_samantha | Rh1AG094600 Rh1BG075500 Rh1CG091900 Rh1DG097900 Rh4AG157200 Rh4BG156700 Rh4CG167200 Rh4DG150900 |
| rosa_wichuraiana | Rw1G007380 Rw4G012850 Rw4G012960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 438, 910 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 430 |
| AccII | CGCG | 2 cut(s) | 278, 724 |
| AciI | CCGC | 7 cut(s) | 251, 481, 661, 681, 693, 724, 914 |
| AclWI | GGATC | 5 cut(s) | 195, 208, 255, 268, 583 |
| AcoI | YGGCCR | 3 cut(s) | 351, 658, 725 |
| AcuI | CTGAAG | 1 cut(s) | 75 |
| AfaI | GTAC | 3 cut(s) | 60, 309, 856 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 89, 257, 430, 435, 457, 548 |
| AflII | CTTAAG | 1 cut(s) | 995 |
| AgsI | TTSAA | 3 cut(s) | 286, 869, 885 |
| AhlI | ACTAGT | 1 cut(s) | 857 |
| AjnI | CCWGG | 4 cut(s) | 10, 377, 423, 727 |
| AluBI | AGCT | 3 cut(s) | 210, 469, 1000 |
| AluI | AGCT | 3 cut(s) | 210, 469, 1000 |
| Alw26I | GTCTC | 1 cut(s) | 303 |
| AlwI | GGATC | 5 cut(s) | 195, 208, 255, 268, 583 |
| Ama87I | CYCGRG | 1 cut(s) | 733 |
| AoxI | GGCC | 7 cut(s) | 351, 426, 658, 667, 694, 725, 781 |
| ApeKI | GCWGC | 2 cut(s) | 188, 686 |
| AspLEI | GCGC | 3 cut(s) | 280, 465, 710 |
| AspS9I | GGNCC | 2 cut(s) | 248, 645 |
| AsuC2I | CCSGG | 2 cut(s) | 255, 350 |
| AsuHPI | GGTGA | 2 cut(s) | 107, 113 |
| AvaI | CYCGRG | 1 cut(s) | 733 |
| AvaII | GGWCC | 2 cut(s) | 248, 645 |
| BaeGI | GKGCMC | 2 cut(s) | 441, 519 |
| BamHI | GGATCC | 2 cut(s) | 200, 260 |
| BanI | GGYRCC | 2 cut(s) | 438, 910 |
| BanII | GRGCYC | 3 cut(s) | 159, 338, 378 |
| BbsI | GAAGAC | 2 cut(s) | 582, 857 |
| BbvI | GCAGC | 2 cut(s) | 175, 673 |
| BccI | CCATC | 4 cut(s) | 73, 92, 683, 965 |
| BceAI | ACGGC | 2 cut(s) | 494, 673 |
| BciT130I | CCWGG | 4 cut(s) | 12, 379, 425, 729 |
| BclI | TGATCA | 3 cut(s) | 361, 496, 754 |
| BcnI | CCSGG | 2 cut(s) | 255, 350 |
| BcoDI | GTCTC | 1 cut(s) | 303 |
| BcuI | ACTAGT | 1 cut(s) | 857 |
| BfaI | CTAG | 3 cut(s) | 170, 269, 858 |
| BfmI | CTRYAG | 1 cut(s) | 189 |
| BfoI | RGCGCY | 2 cut(s) | 466, 711 |
| BfrI | CTTAAG | 1 cut(s) | 995 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 666 |
| BisI | GCNGC | 6 cut(s) | 189, 661, 687, 694, 725, 914 |
| BlsI | GCNGC | 6 cut(s) | 190, 662, 688, 695, 726, 915 |
| BmcAI | AGTACT | 1 cut(s) | 856 |
| Bme1390I | CCNGG | 6 cut(s) | 12, 255, 350, 379, 425, 729 |
| Bme18I | GGWCC | 2 cut(s) | 248, 645 |
| BmeT110I | CYCGRG | 1 cut(s) | 733 |
| BmgT120I | GGNCC | 2 cut(s) | 248, 645 |
| BmiI | GGNNCC | 8 cut(s) | 202, 249, 262, 375, 440, 485, 647, 912 |
| BmrFI | CCNGG | 6 cut(s) | 12, 255, 350, 379, 425, 729 |
| BmrI | ACTGGG | 1 cut(s) | 37 |
| BmuI | ACTGGG | 1 cut(s) | 37 |
| BpiI | GAAGAC | 2 cut(s) | 582, 857 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 320, 352 |
| BpmI | CTGGAG | 1 cut(s) | 770 |
| BpuMI | CCSGG | 2 cut(s) | 255, 350 |
| BsaJI | CCNNGG | 5 cut(s) | 377, 378, 423, 429, 641 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 29, 59, 844, 874 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 89, 257, 430, 435, 457, 548 |
| Bse1I | ACTGG | 1 cut(s) | 43 |
| BseBI | CCWGG | 4 cut(s) | 12, 379, 425, 729 |
| BseDI | CCNNGG | 5 cut(s) | 377, 378, 423, 429, 641 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 89, 257, 430, 435, 457, 548 |
| BseMII | CTCAG | 2 cut(s) | 314, 351 |
| BseNI | ACTGG | 1 cut(s) | 43 |
| BseRI | GAGGAG | 2 cut(s) | 344, 945 |
| BseSI | GKGCMC | 2 cut(s) | 441, 519 |
| BseX3I | CGGCCG | 2 cut(s) | 351, 658 |
| BseXI | GCAGC | 2 cut(s) | 175, 673 |
| BsgI | GTGCAG | 1 cut(s) | 36 |
| Bsh1236I | CGCG | 2 cut(s) | 278, 724 |
| Bsh1285I | CGRYCG | 2 cut(s) | 354, 661 |
| BshFI | GGCC | 7 cut(s) | 353, 428, 660, 669, 696, 727, 783 |
| BshNI | GGYRCC | 2 cut(s) | 438, 910 |
| BsiEI | CGRYCG | 2 cut(s) | 354, 661 |
| BsiHKCI | CYCGRG | 1 cut(s) | 733 |
| BsiSI | CCGG | 2 cut(s) | 254, 350 |
| BslFI | GGGAC | 3 cut(s) | 25, 631, 976 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 89, 257, 430, 435, 457, 548 |
| BsmAI | GTCTC | 1 cut(s) | 303 |
| BsmBI | CGTCTC | 1 cut(s) | 303 |
| BsmFI | GGGAC | 3 cut(s) | 25, 631, 976 |
| BsnI | GGCC | 7 cut(s) | 353, 428, 660, 669, 696, 727, 783 |
| BsoBI | CYCGRG | 1 cut(s) | 733 |
| Bsp1286I | GDGCHC | 5 cut(s) | 159, 338, 378, 441, 519 |
| Bsp143I | GATC | 8 cut(s) | 200, 260, 361, 496, 575, 754, 931, 985 |
| BspACI | CCGC | 7 cut(s) | 251, 481, 661, 681, 693, 724, 914 |
| BspANI | GGCC | 7 cut(s) | 353, 428, 660, 669, 696, 727, 783 |
| BspCNI | CTCAG | 2 cut(s) | 313, 350 |
| BspFNI | CGCG | 2 cut(s) | 278, 724 |
| BspLI | GGNNCC | 8 cut(s) | 202, 249, 262, 375, 440, 485, 647, 912 |
| BspMAI | CTGCAG | 1 cut(s) | 193 |
| BspPI | GGATC | 5 cut(s) | 195, 208, 255, 268, 583 |
| BspT107I | GGYRCC | 2 cut(s) | 438, 910 |
| BspTI | CTTAAG | 1 cut(s) | 995 |
| BsrI | ACTGG | 1 cut(s) | 43 |
| BssECI | CCNNGG | 5 cut(s) | 377, 378, 423, 429, 641 |
| BssMI | GATC | 8 cut(s) | 200, 260, 361, 496, 575, 754, 931, 985 |
| BssT1I | CCWWGG | 1 cut(s) | 429 |
| Bst2UI | CCWGG | 4 cut(s) | 12, 379, 425, 729 |
| Bst6I | CTCTTC | 1 cut(s) | 295 |
| BstAFI | CTTAAG | 1 cut(s) | 995 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 399 |
| BstC8I | GCNNGC | 4 cut(s) | 467, 471, 691, 813 |
| BstDEI | CTNAG | 2 cut(s) | 300, 337 |
| BstDSI | CCRYGG | 1 cut(s) | 641 |
| BstFNI | CGCG | 2 cut(s) | 278, 724 |
| BstH2I | RGCGCY | 2 cut(s) | 466, 711 |
| BstHHI | GCGC | 3 cut(s) | 280, 465, 710 |
| BstKTI | GATC | 8 cut(s) | 203, 263, 364, 499, 578, 757, 934, 988 |
| BstMAI | GTCTC | 1 cut(s) | 303 |
| BstMBI | GATC | 8 cut(s) | 200, 260, 361, 496, 575, 754, 931, 985 |
| BstMCI | CGRYCG | 2 cut(s) | 354, 661 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 23, 76, 399, 666, 714 |
| BstNI | CCWGG | 4 cut(s) | 12, 379, 425, 729 |
| BstNSI | RCATGY | 1 cut(s) | 30 |
| BstSCI | CCNGG | 6 cut(s) | 10, 253, 348, 377, 423, 727 |
| BstSFI | CTRYAG | 1 cut(s) | 189 |
| BstSLI | GKGCMC | 2 cut(s) | 441, 519 |
| BstUI | CGCG | 2 cut(s) | 278, 724 |
| BstV1I | GCAGC | 2 cut(s) | 175, 673 |
| BstV2I | GAAGAC | 2 cut(s) | 582, 857 |
| BstX2I | RGATCY | 3 cut(s) | 200, 260, 575 |
| BstYI | RGATCY | 3 cut(s) | 200, 260, 575 |
| BstZI | CGGCCG | 2 cut(s) | 351, 658 |
| BsuRI | GGCC | 7 cut(s) | 353, 428, 660, 669, 696, 727, 783 |
| BtgI | CCRYGG | 1 cut(s) | 641 |
| BtgZI | GCGATG | 1 cut(s) | 51 |
| BtsI | GCAGTG | 2 cut(s) | 24, 198 |
| BtsIMutI | CAGTG | 2 cut(s) | 24, 198 |
| Cac8I | GCNNGC | 4 cut(s) | 467, 471, 691, 813 |
| CfoI | GCGC | 3 cut(s) | 280, 465, 710 |
| Cfr13I | GGNCC | 2 cut(s) | 248, 645 |
| CsiI | ACCWGGT | 1 cut(s) | 10 |
| Csp6I | GTAC | 3 cut(s) | 59, 308, 855 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 73, 108 |
| CviAII | CATG | 2 cut(s) | 27, 616 |
| CviQI | GTAC | 3 cut(s) | 59, 308, 855 |
| DdeI | CTNAG | 2 cut(s) | 300, 337 |
| DpnI | GATC | 8 cut(s) | 202, 262, 363, 498, 577, 756, 933, 987 |
| DpnII | GATC | 8 cut(s) | 200, 260, 361, 496, 575, 754, 931, 985 |
| DraI | TTTAAA | 1 cut(s) | 388 |
| EaeI | YGGCCR | 3 cut(s) | 351, 658, 725 |
| EagI | CGGCCG | 2 cut(s) | 351, 658 |
| Eam1104I | CTCTTC | 1 cut(s) | 295 |
| EarI | CTCTTC | 1 cut(s) | 295 |
| EciI | GGCGGA | 2 cut(s) | 240, 496 |
| EclXI | CGGCCG | 2 cut(s) | 351, 658 |
| Eco130I | CCWWGG | 1 cut(s) | 429 |
| Eco147I | AGGCCT | 2 cut(s) | 428, 783 |
| Eco24I | GRGCYC | 3 cut(s) | 159, 338, 378 |
| Eco47I | GGWCC | 2 cut(s) | 248, 645 |
| Eco52I | CGGCCG | 2 cut(s) | 351, 658 |
| Eco57I | CTGAAG | 1 cut(s) | 75 |
| Eco88I | CYCGRG | 1 cut(s) | 733 |
| EcoRII | CCWGG | 4 cut(s) | 10, 377, 423, 727 |
| EcoT14I | CCWWGG | 1 cut(s) | 429 |
| EcoT38I | GRGCYC | 3 cut(s) | 159, 338, 378 |
| ErhI | CCWWGG | 1 cut(s) | 429 |
| Esp3I | CGTCTC | 1 cut(s) | 303 |
| FaeI | CATG | 2 cut(s) | 30, 619 |
| FaqI | GGGAC | 3 cut(s) | 25, 631, 976 |
| FatI | CATG | 2 cut(s) | 26, 615 |
| FauNDI | CATATG | 1 cut(s) | 501 |
| FbaI | TGATCA | 3 cut(s) | 361, 496, 754 |
| Fnu4HI | GCNGC | 6 cut(s) | 189, 661, 687, 694, 725, 914 |
| FriOI | GRGCYC | 3 cut(s) | 159, 338, 378 |
| Fsp4HI | GCNGC | 6 cut(s) | 189, 661, 687, 694, 725, 914 |
| FspBI | CTAG | 3 cut(s) | 170, 269, 858 |
| GlaI | GCGC | 3 cut(s) | 279, 464, 709 |
| GluI | GCNGC | 6 cut(s) | 189, 661, 687, 694, 725, 914 |
| GsuI | CTGGAG | 1 cut(s) | 770 |
| HaeII | RGCGCY | 2 cut(s) | 466, 711 |
| HaeIII | GGCC | 7 cut(s) | 353, 428, 660, 669, 696, 727, 783 |
| HapII | CCGG | 2 cut(s) | 254, 350 |
| HhaI | GCGC | 3 cut(s) | 280, 465, 710 |
| Hin1II | CATG | 2 cut(s) | 30, 619 |
| Hin6I | GCGC | 3 cut(s) | 278, 463, 708 |
| HinP1I | GCGC | 3 cut(s) | 278, 463, 708 |
| HincII | GTYRAC | 1 cut(s) | 894 |
| HindII | GTYRAC | 1 cut(s) | 894 |
| HindIII | AAGCTT | 1 cut(s) | 998 |
| HinfI | GANTC | 5 cut(s) | 38, 611, 619, 840, 981 |
| HpaII | CCGG | 2 cut(s) | 254, 350 |
| HphI | GGTGA | 2 cut(s) | 107, 113 |
| Hpy166II | GTNNAC | 1 cut(s) | 894 |
| Hpy188I | TCNGA | 5 cut(s) | 55, 340, 366, 605, 941 |
| Hpy188III | TCNNGA | 3 cut(s) | 269, 415, 787 |
| Hpy8I | GTNNAC | 1 cut(s) | 894 |
| Hpy99I | CGWCG | 1 cut(s) | 298 |
| HpyAV | CCTTC | 7 cut(s) | 81, 83, 121, 169, 175, 246, 639 |
| HpyCH4V | TGCA | 4 cut(s) | 17, 191, 393, 778 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 23, 76, 399, 666, 714 |
| HpyF3I | CTNAG | 2 cut(s) | 300, 337 |
| Hsp92II | CATG | 2 cut(s) | 30, 619 |
| HspAI | GCGC | 3 cut(s) | 278, 463, 708 |
| Ksp22I | TGATCA | 3 cut(s) | 361, 496, 754 |
| Kzo9I | GATC | 8 cut(s) | 200, 260, 361, 496, 575, 754, 931, 985 |
| LmnI | GCTCC | 3 cut(s) | 373, 460, 483 |
| Lsp1109I | GCAGC | 2 cut(s) | 175, 673 |
| MabI | ACCWGGT | 1 cut(s) | 10 |
| MaeI | CTAG | 3 cut(s) | 170, 269, 858 |
| MalI | GATC | 8 cut(s) | 202, 262, 363, 498, 577, 756, 933, 987 |
| MboI | GATC | 8 cut(s) | 200, 260, 361, 496, 575, 754, 931, 985 |
| MboII | GAAGA | 7 cut(s) | 16, 66, 133, 282, 582, 857, 926 |
| MflI | RGATCY | 3 cut(s) | 200, 260, 575 |
| MhlI | GDGCHC | 5 cut(s) | 159, 338, 378, 441, 519 |
| MluCI | AATT | 2 cut(s) | 138, 803 |
| MlyI | GAGTC | 3 cut(s) | 47, 605, 975 |
| MmeI | TCCRAC | 2 cut(s) | 264, 964 |
| MseI | TTAA | 3 cut(s) | 146, 387, 996 |
| MslI | CAYNNNNRTG | 1 cut(s) | 504 |
| MspA1I | CMGCKG | 2 cut(s) | 469, 693 |
| MspCI | CTTAAG | 1 cut(s) | 995 |
| MspI | CCGG | 2 cut(s) | 254, 350 |
| MspR9I | CCNGG | 6 cut(s) | 12, 255, 350, 379, 425, 729 |
| MvaI | CCWGG | 4 cut(s) | 12, 379, 425, 729 |
| MvnI | CGCG | 2 cut(s) | 278, 724 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 23, 76, 399, 666, 714 |
| NciI | CCSGG | 2 cut(s) | 255, 350 |
| NdeI | CATATG | 1 cut(s) | 501 |
| NdeII | GATC | 8 cut(s) | 200, 260, 361, 496, 575, 754, 931, 985 |
| NlaIII | CATG | 2 cut(s) | 30, 619 |
| NlaIV | GGNNCC | 8 cut(s) | 202, 249, 262, 375, 440, 485, 647, 912 |
| NmeAIII | GCCGAG | 1 cut(s) | 379 |
| NspI | RCATGY | 1 cut(s) | 30 |
| PaeR7I | CTCGAG | 1 cut(s) | 733 |
| PasI | CCCWGGG | 1 cut(s) | 378 |
| PceI | AGGCCT | 2 cut(s) | 428, 783 |
| PfeI | GAWTC | 2 cut(s) | 619, 840 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 430 |
| PkrI | GCNGC | 6 cut(s) | 190, 662, 688, 695, 726, 915 |
| PleI | GAGTC | 3 cut(s) | 46, 605, 975 |
| PpsI | GAGTC | 3 cut(s) | 46, 605, 975 |
| Psp6I | CCWGG | 4 cut(s) | 10, 377, 423, 727 |
| PspGI | CCWGG | 4 cut(s) | 10, 377, 423, 727 |
| PspN4I | GGNNCC | 8 cut(s) | 202, 249, 262, 375, 440, 485, 647, 912 |
| PspPI | GGNCC | 2 cut(s) | 248, 645 |
| PspXI | VCTCGAGB | 1 cut(s) | 733 |
| PstI | CTGCAG | 1 cut(s) | 193 |
| PsuI | RGATCY | 3 cut(s) | 200, 260, 575 |
| PvuII | CAGCTG | 1 cut(s) | 469 |
| RsaI | GTAC | 3 cut(s) | 60, 309, 856 |
| RsaNI | GTAC | 3 cut(s) | 59, 308, 855 |
| RseI | CAYNNNNRTG | 1 cut(s) | 504 |
| SaqAI | TTAA | 3 cut(s) | 146, 387, 996 |
| SatI | GCNGC | 6 cut(s) | 189, 661, 687, 694, 725, 914 |
| Sau3AI | GATC | 8 cut(s) | 200, 260, 361, 496, 575, 754, 931, 985 |
| Sau96I | GGNCC | 2 cut(s) | 248, 645 |
| ScaI | AGTACT | 1 cut(s) | 856 |
| SchI | GAGTC | 3 cut(s) | 47, 605, 975 |
| ScrFI | CCNGG | 6 cut(s) | 12, 255, 350, 379, 425, 729 |
| SduI | GDGCHC | 5 cut(s) | 159, 338, 378, 441, 519 |
| SexAI | ACCWGGT | 1 cut(s) | 10 |
| SfcI | CTRYAG | 1 cut(s) | 189 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 666 |
| Sfr274I | CTCGAG | 1 cut(s) | 733 |
| SinI | GGWCC | 2 cut(s) | 248, 645 |
| SlaI | CTCGAG | 1 cut(s) | 733 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 504 |
| SmlI | CTYRAG | 2 cut(s) | 733, 995 |
| SmoI | CTYRAG | 2 cut(s) | 733, 995 |
| SpeI | ACTAGT | 1 cut(s) | 857 |
| Sse9I | AATT | 2 cut(s) | 138, 803 |
| SseBI | AGGCCT | 2 cut(s) | 428, 783 |
| SsiI | CCGC | 7 cut(s) | 251, 481, 661, 681, 693, 724, 914 |
| SspMI | CTAG | 3 cut(s) | 170, 269, 858 |
| StuI | AGGCCT | 2 cut(s) | 428, 783 |
| StyD4I | CCNGG | 6 cut(s) | 10, 253, 348, 377, 423, 727 |
| StyI | CCWWGG | 1 cut(s) | 429 |
| TaqI | TCGA | 4 cut(s) | 416, 734, 843, 984 |
| TasI | AATT | 2 cut(s) | 138, 803 |
| TatI | WGTACW | 1 cut(s) | 854 |
| TauI | GCSGC | 4 cut(s) | 663, 696, 727, 916 |
| TfiI | GAWTC | 2 cut(s) | 619, 840 |
| Tru1I | TTAA | 3 cut(s) | 146, 387, 996 |
| Tru9I | TTAA | 3 cut(s) | 146, 387, 996 |
| TscAI | CASTG | 2 cut(s) | 24, 198 |
| TseI | GCWGC | 2 cut(s) | 188, 686 |
| TspDTI | ATGAA | 5 cut(s) | 17, 134, 140, 611, 816 |
| TspRI | CASTG | 2 cut(s) | 24, 198 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 430 |
| Vha464I | CTTAAG | 1 cut(s) | 995 |
| VpaK11BI | GGWCC | 2 cut(s) | 248, 645 |
| XbaI | TCTAGA | 1 cut(s) | 268 |
| XceI | RCATGY | 1 cut(s) | 30 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 214 |
| XhoI | CTCGAG | 1 cut(s) | 733 |
| XspI | CTAG | 3 cut(s) | 170, 269, 858 |
| ZrmI | AGTACT | 1 cut(s) | 856 |