Rh1CG091900

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Forward (+)
19631823 .. 19640190
8368 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG091900.1

Sequence Viewer

Length: 1116 bp
ATGAAAATACACATAAAACCAGGTGCAGTGGAAGCATGTCCTTTGGAGTCCCAGGTTGCCTCTGAAGTACCACCATCGCCTTCTTCGCTTCCCAAAGAAGGTGGCGATGGTGATGACAAGAGCAATATGAAGATGAAGGAGAAAGTAATTGTCTTAATAGACGAGCCCCAACAATCACTAGAGAAGGAGAAGGAGGCTGCGGTGGGTGGATCCACCAGCTCTGGTGTGGTGCTTGATATGACACCTTCCAACCAGGGTCCGCCGGGTGGATCCAATCTAGAACTCGCTCTTTTCAACTCTTCGTCGTCTCAGTTAGTACCAGAGGTGGTGGAGGTGGAGGAGGGCTCAGACGAGAACCCGGCGGCGCGTGATCAGAAAAAGGAGCCCAGGGTTTTCAAATGCAACTTCTGCCAGAGAAAGTTCTCGACCTCCCAGGCCTTGGGAGGGCACCAGAACGCCCACAAGCAGGAGCGCCAGCTGGCGAAACGGCGGAGTCAAGCTTTTGATCATATGGGTGGATTAGGGAACTCGCACTTTCCTTATTACAGCCCATATTCAGGCTTCTCCACACACTCTCTCTATGGATCTTACAACAGGTCTTCTCTTGGTGTCAGAATGGACTCCATGATTCATAAACCTTCTTATACCCCGTGGTCCCAAACTTACGGCCGCTTTGGCCTTGCCCTCGGCGGTGCTGCCAGCGGCCTCGGTGGAGGCGCTTCTGGCTGGTCGCGGCCAGGCTCGAGCCTCATCAACTGTATTGATCAACATAGGCTAACCTCCTTGCAAGGCCTCCAGAATAATATCAATGAATTAGGGCTTGCTGGACGAACTGCTACCGCTCCAAGATTCGAGCAGGGGAGTACTAGTGGTCTTCAAAACTTTGGTGGTTCAAATCTGTCAGCTCTCAACAACAGGGTGCCGCCAACAAATGGTGCTGATCTTCTCCGACAAGCAGAGCCTCCTCAATGTGATACCGATGAGTTCAAGGAGAAAAACCTCAGTGAGAAACAAACCCACCGAGGCAAAAATAGAGTCGGGTCCCCTTCCAAGCTGCAATTTTGGAGTTCCATGTTCGAATTCAGCTACAACGGCCATCCTGGACGTTGTTCATAA

Protein Analysis

371

Amino Acids

40.01

Weight (kDa)

8.15

Isoelectric Point (pI)

50.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 447, 919
AccB7I CCANNNNNTGG 2 cut(s) 439, 932
AccBSI CCGCTC 1 cut(s) 842
AccII CGCG 2 cut(s) 367, 733
AclWI GGATC 5 cut(s) 204, 217, 264, 277, 592
AcoI YGGCCR 3 cut(s) 667, 734, 1093
AcsI RAATTY 1 cut(s) 1079
AcuI CTGAAG 1 cut(s) 84
AfaI GTAC 3 cut(s) 69, 318, 865
AfiI CCNNNNNNNGG 7 cut(s) 98, 266, 439, 444, 466, 557, 932
AgsI TTSAA 5 cut(s) 295, 397, 878, 894, 988
AhlI ACTAGT 1 cut(s) 866
AjnI CCWGG 7 cut(s) 19, 51, 252, 386, 432, 736, 1099
AluBI AGCT 6 cut(s) 219, 478, 500, 905, 1054, 1086
AluI AGCT 6 cut(s) 219, 478, 500, 905, 1054, 1086
Alw26I GTCTC 1 cut(s) 312
AlwI GGATC 5 cut(s) 204, 217, 264, 277, 592
Ama87I CYCGRG 1 cut(s) 742
AoxI GGCC 7 cut(s) 435, 667, 676, 703, 734, 790, 1093
ApeKI GCWGC 3 cut(s) 197, 695, 1054
ApoI RAATTY 1 cut(s) 1079
ArsI GACNNNNNNTTYG 2 cut(s) 1020, 1052
AspLEI GCGC 3 cut(s) 367, 474, 719
AspS9I GGNCC 3 cut(s) 257, 654, 1041
AsuC2I CCSGG 2 cut(s) 264, 359
AsuHPI GGTGA 1 cut(s) 122
AsuII TTCGAA 1 cut(s) 1077
AvaI CYCGRG 1 cut(s) 742
AvaII GGWCC 3 cut(s) 257, 654, 1041
BaeGI GKGCMC 1 cut(s) 450
BamHI GGATCC 2 cut(s) 209, 269
BanI GGYRCC 2 cut(s) 447, 919
BanII GRGCYC 3 cut(s) 168, 347, 387
BbsI GAAGAC 2 cut(s) 591, 866
BbvI GCAGC 3 cut(s) 184, 682, 1041
BccI CCATC 3 cut(s) 82, 101, 1104
BceAI ACGGC 3 cut(s) 503, 682, 1108
BciT130I CCWGG 7 cut(s) 21, 53, 254, 388, 434, 738, 1101
BclI TGATCA 3 cut(s) 370, 505, 763
BcnI CCSGG 2 cut(s) 264, 359
BcoDI GTCTC 1 cut(s) 312
BcuI ACTAGT 1 cut(s) 866
BfaI CTAG 3 cut(s) 179, 278, 867
BfoI RGCGCY 2 cut(s) 475, 720
BglI GCCNNNNNGGC 1 cut(s) 675
BisI GCNGC 8 cut(s) 198, 363, 670, 696, 703, 734, 923, 1055
BlsI GCNGC 8 cut(s) 199, 364, 671, 697, 704, 735, 924, 1056
BmcAI AGTACT 1 cut(s) 865
Bme1390I CCNGG 9 cut(s) 21, 53, 254, 264, 359, 388, 434, 738, 1101
Bme18I GGWCC 3 cut(s) 257, 654, 1041
BmeT110I CYCGRG 1 cut(s) 742
BmgT120I GGNCC 3 cut(s) 257, 654, 1041
BmiI GGNNCC 9 cut(s) 211, 258, 271, 384, 449, 656, 921, 1042, 1043
BmrFI CCNGG 9 cut(s) 21, 53, 254, 264, 359, 388, 434, 738, 1101
BpiI GAAGAC 2 cut(s) 591, 866
BplI GAGNNNNNCTC 2 cut(s) 329, 361
BpmI CTGGAG 1 cut(s) 779
Bpu14I TTCGAA 1 cut(s) 1077
BpuMI CCSGG 2 cut(s) 264, 359
BsaXI ACNNNNNCTCC 2 cut(s) 853, 883
Bsc4I CCNNNNNNNGG 7 cut(s) 98, 266, 439, 444, 466, 557, 932
BseBI CCWGG 7 cut(s) 21, 53, 254, 388, 434, 738, 1101
BseGI GGATG 1 cut(s) 1096
BseLI CCNNNNNNNGG 7 cut(s) 98, 266, 439, 444, 466, 557, 932
BseMII CTCAG 3 cut(s) 323, 360, 1015
BseRI GAGGAG 2 cut(s) 353, 954
BseSI GKGCMC 1 cut(s) 450
BseX3I CGGCCG 1 cut(s) 667
BseXI GCAGC 3 cut(s) 184, 682, 1041
BsgI GTGCAG 1 cut(s) 45
Bsh1236I CGCG 2 cut(s) 367, 733
Bsh1285I CGRYCG 1 cut(s) 670
BshFI GGCC 7 cut(s) 437, 669, 678, 705, 736, 792, 1095
BshNI GGYRCC 2 cut(s) 447, 919
BsiEI CGRYCG 1 cut(s) 670
BsiHKCI CYCGRG 1 cut(s) 742
BsiSI CCGG 2 cut(s) 263, 359
BslFI GGGAC 3 cut(s) 34, 640, 1027
BslI CCNNNNNNNGG 7 cut(s) 98, 266, 439, 444, 466, 557, 932
BsmAI GTCTC 1 cut(s) 312
BsmBI CGTCTC 1 cut(s) 312
BsmFI GGGAC 3 cut(s) 34, 640, 1027
BsnI GGCC 7 cut(s) 437, 669, 678, 705, 736, 792, 1095
BsoBI CYCGRG 1 cut(s) 742
Bsp119I TTCGAA 1 cut(s) 1077
Bsp1286I GDGCHC 4 cut(s) 168, 347, 387, 450
Bsp143I GATC 7 cut(s) 209, 269, 370, 505, 584, 763, 940
BspANI GGCC 7 cut(s) 437, 669, 678, 705, 736, 792, 1095
BspCNI CTCAG 3 cut(s) 322, 359, 1014
BspFNI CGCG 2 cut(s) 367, 733
BspLI GGNNCC 9 cut(s) 211, 258, 271, 384, 449, 656, 921, 1042, 1043
BspPI GGATC 5 cut(s) 204, 217, 264, 277, 592
BspT104I TTCGAA 1 cut(s) 1077
BspT107I GGYRCC 2 cut(s) 447, 919
BsrBI CCGCTC 1 cut(s) 842
BssMI GATC 7 cut(s) 209, 269, 370, 505, 584, 763, 940
BssT1I CCWWGG 1 cut(s) 438
Bst2UI CCWGG 7 cut(s) 21, 53, 254, 388, 434, 738, 1101
Bst4CI ACNGT 1 cut(s) 758
Bst6I CTCTTC 1 cut(s) 304
BstAPI GCANNNNNTGC 1 cut(s) 408
BstBI TTCGAA 1 cut(s) 1077
BstC8I GCNNGC 4 cut(s) 476, 480, 700, 822
BstDEI CTNAG 3 cut(s) 309, 346, 1001
BstDSI CCRYGG 1 cut(s) 650
BstF5I GGATG 1 cut(s) 1096
BstFNI CGCG 2 cut(s) 367, 733
BstH2I RGCGCY 2 cut(s) 475, 720
BstHHI GCGC 3 cut(s) 367, 474, 719
BstKTI GATC 7 cut(s) 212, 272, 373, 508, 587, 766, 943
BstMAI GTCTC 1 cut(s) 312
BstMBI GATC 7 cut(s) 209, 269, 370, 505, 584, 763, 940
BstMCI CGRYCG 1 cut(s) 670
BstMWI GCNNNNNNNGC 6 cut(s) 32, 85, 408, 675, 723, 1092
BstNI CCWGG 7 cut(s) 21, 53, 254, 388, 434, 738, 1101
BstNSI RCATGY 1 cut(s) 39
BstSCI CCNGG 9 cut(s) 19, 51, 252, 262, 357, 386, 432, 736, 1099
BstSLI GKGCMC 1 cut(s) 450
BstUI CGCG 2 cut(s) 367, 733
BstV1I GCAGC 3 cut(s) 184, 682, 1041
BstV2I GAAGAC 2 cut(s) 591, 866
BstX2I RGATCY 3 cut(s) 209, 269, 584
BstYI RGATCY 3 cut(s) 209, 269, 584
BstZI CGGCCG 1 cut(s) 667
BsuRI GGCC 7 cut(s) 437, 669, 678, 705, 736, 792, 1095
BtgI CCRYGG 1 cut(s) 650
BtgZI GCGATG 2 cut(s) 60, 120
BtsCI GGATG 1 cut(s) 1096
BtsI GCAGTG 1 cut(s) 33
BtsIMutI CAGTG 2 cut(s) 33, 1009
Cac8I GCNNGC 4 cut(s) 476, 480, 700, 822
CfoI GCGC 3 cut(s) 367, 474, 719
Cfr13I GGNCC 3 cut(s) 257, 654, 1041
CsiI ACCWGGT 1 cut(s) 19
Csp6I GTAC 3 cut(s) 68, 317, 864
CspCI CAANNNNNGTGG 2 cut(s) 82, 117
CviAII CATG 3 cut(s) 36, 625, 1072
CviQI GTAC 3 cut(s) 68, 317, 864
DdeI CTNAG 3 cut(s) 309, 346, 1001
DpnI GATC 7 cut(s) 211, 271, 372, 507, 586, 765, 942
DpnII GATC 7 cut(s) 209, 269, 370, 505, 584, 763, 940
EaeI YGGCCR 3 cut(s) 667, 734, 1093
EagI CGGCCG 1 cut(s) 667
Eam1104I CTCTTC 1 cut(s) 304
EarI CTCTTC 1 cut(s) 304
EciI GGCGGA 2 cut(s) 249, 505
EclXI CGGCCG 1 cut(s) 667
Eco130I CCWWGG 1 cut(s) 438
Eco147I AGGCCT 2 cut(s) 437, 792
Eco24I GRGCYC 3 cut(s) 168, 347, 387
Eco47I GGWCC 3 cut(s) 257, 654, 1041
Eco52I CGGCCG 1 cut(s) 667
Eco57I CTGAAG 1 cut(s) 84
Eco88I CYCGRG 1 cut(s) 742
EcoO109I RGGNCCY 1 cut(s) 1041
EcoRI GAATTC 1 cut(s) 1079
EcoRII CCWGG 7 cut(s) 19, 51, 252, 386, 432, 736, 1099
EcoT14I CCWWGG 1 cut(s) 438
EcoT38I GRGCYC 3 cut(s) 168, 347, 387
ErhI CCWWGG 1 cut(s) 438
Esp3I CGTCTC 1 cut(s) 312
FaeI CATG 3 cut(s) 39, 628, 1075
FaqI GGGAC 3 cut(s) 34, 640, 1027
FatI CATG 3 cut(s) 35, 624, 1071
FauNDI CATATG 1 cut(s) 510
FbaI TGATCA 3 cut(s) 370, 505, 763
Fnu4HI GCNGC 8 cut(s) 198, 363, 670, 696, 703, 734, 923, 1055
FokI GGATG 1 cut(s) 1083
FriOI GRGCYC 3 cut(s) 168, 347, 387
Fsp4HI GCNGC 8 cut(s) 198, 363, 670, 696, 703, 734, 923, 1055
FspBI CTAG 3 cut(s) 179, 278, 867
GlaI GCGC 3 cut(s) 366, 473, 718
GluI GCNGC 8 cut(s) 198, 363, 670, 696, 703, 734, 923, 1055
GsuI CTGGAG 1 cut(s) 779
HaeII RGCGCY 2 cut(s) 475, 720
HaeIII GGCC 7 cut(s) 437, 669, 678, 705, 736, 792, 1095
HapII CCGG 2 cut(s) 263, 359
HhaI GCGC 3 cut(s) 367, 474, 719
Hin1II CATG 3 cut(s) 39, 628, 1075
Hin6I GCGC 3 cut(s) 365, 472, 717
HinP1I GCGC 3 cut(s) 365, 472, 717
HindIII AAGCTT 1 cut(s) 498
HinfI GANTC 6 cut(s) 47, 493, 620, 628, 849, 1035
HpaII CCGG 2 cut(s) 263, 359
HphI GGTGA 1 cut(s) 122
Hpy188I TCNGA 5 cut(s) 64, 349, 375, 614, 950
Hpy188III TCNNGA 3 cut(s) 278, 424, 796
Hpy99I CGWCG 1 cut(s) 307
HpyAV CCTTC 8 cut(s) 90, 92, 130, 178, 184, 255, 648, 1056
HpyCH4III ACNGT 1 cut(s) 758
HpyCH4IV ACGT 1 cut(s) 1105
HpyCH4V TGCA 4 cut(s) 26, 402, 787, 1057
HpyF10VI GCNNNNNNNGC 6 cut(s) 32, 85, 408, 675, 723, 1092
HpyF3I CTNAG 3 cut(s) 309, 346, 1001
HpySE526I ACGT 1 cut(s) 1105
Hsp92II CATG 3 cut(s) 39, 628, 1075
HspAI GCGC 3 cut(s) 365, 472, 717
KflI GGGWCCC 1 cut(s) 1041
Ksp22I TGATCA 3 cut(s) 370, 505, 763
Kzo9I GATC 7 cut(s) 209, 269, 370, 505, 584, 763, 940
LmnI GCTCC 3 cut(s) 382, 469, 847
Lsp1109I GCAGC 3 cut(s) 184, 682, 1041
MabI ACCWGGT 1 cut(s) 19
MaeI CTAG 3 cut(s) 179, 278, 867
MaeII ACGT 1 cut(s) 1105
MalI GATC 7 cut(s) 211, 271, 372, 507, 586, 765, 942
MbiI CCGCTC 1 cut(s) 842
MboI GATC 7 cut(s) 209, 269, 370, 505, 584, 763, 940
MboII GAAGA 6 cut(s) 75, 142, 291, 591, 866, 935
MflI RGATCY 3 cut(s) 209, 269, 584
MhlI GDGCHC 4 cut(s) 168, 347, 387, 450
MluCI AATT 4 cut(s) 147, 812, 1058, 1079
MlyI GAGTC 4 cut(s) 56, 502, 614, 1044
MmeI TCCRAC 2 cut(s) 273, 973
MseI TTAA 1 cut(s) 155
MslI CAYNNNNRTG 1 cut(s) 513
MspA1I CMGCKG 2 cut(s) 478, 702
MspI CCGG 2 cut(s) 263, 359
MspR9I CCNGG 9 cut(s) 21, 53, 254, 264, 359, 388, 434, 738, 1101
MvaI CCWGG 7 cut(s) 21, 53, 254, 388, 434, 738, 1101
MvnI CGCG 2 cut(s) 367, 733
MwoI GCNNNNNNNGC 6 cut(s) 32, 85, 408, 675, 723, 1092
NciI CCSGG 2 cut(s) 264, 359
NdeI CATATG 1 cut(s) 510
NdeII GATC 7 cut(s) 209, 269, 370, 505, 584, 763, 940
NlaIII CATG 3 cut(s) 39, 628, 1075
NlaIV GGNNCC 9 cut(s) 211, 258, 271, 384, 449, 656, 921, 1042, 1043
NmeAIII GCCGAG 1 cut(s) 666
NspI RCATGY 1 cut(s) 39
NspV TTCGAA 1 cut(s) 1077
PaeR7I CTCGAG 1 cut(s) 742
PasI CCCWGGG 1 cut(s) 387
PceI AGGCCT 2 cut(s) 437, 792
PfeI GAWTC 2 cut(s) 628, 849
PflMI CCANNNNNTGG 2 cut(s) 439, 932
PfoI TCCNGGA 1 cut(s) 1099
PkrI GCNGC 8 cut(s) 199, 364, 671, 697, 704, 735, 924, 1056
PleI GAGTC 4 cut(s) 55, 501, 614, 1043
PpsI GAGTC 4 cut(s) 55, 501, 614, 1043
PpuMI RGGWCCY 1 cut(s) 1041
Psp5II RGGWCCY 1 cut(s) 1041
Psp6I CCWGG 7 cut(s) 19, 51, 252, 386, 432, 736, 1099
PspGI CCWGG 7 cut(s) 19, 51, 252, 386, 432, 736, 1099
PspN4I GGNNCC 9 cut(s) 211, 258, 271, 384, 449, 656, 921, 1042, 1043
PspPI GGNCC 3 cut(s) 257, 654, 1041
PspPPI RGGWCCY 1 cut(s) 1041
PspXI VCTCGAGB 1 cut(s) 742
PsuI RGATCY 3 cut(s) 209, 269, 584
PvuII CAGCTG 1 cut(s) 478
RsaI GTAC 3 cut(s) 69, 318, 865
RsaNI GTAC 3 cut(s) 68, 317, 864
RseI CAYNNNNRTG 1 cut(s) 513
SaqAI TTAA 1 cut(s) 155
SatI GCNGC 8 cut(s) 198, 363, 670, 696, 703, 734, 923, 1055
Sau3AI GATC 7 cut(s) 209, 269, 370, 505, 584, 763, 940
Sau96I GGNCC 3 cut(s) 257, 654, 1041
ScaI AGTACT 1 cut(s) 865
SchI GAGTC 4 cut(s) 56, 502, 614, 1044
ScrFI CCNGG 9 cut(s) 21, 53, 254, 264, 359, 388, 434, 738, 1101
SduI GDGCHC 4 cut(s) 168, 347, 387, 450
SexAI ACCWGGT 1 cut(s) 19
SfiI GGCCNNNNNGGCC 1 cut(s) 675
Sfr274I CTCGAG 1 cut(s) 742
SfuI TTCGAA 1 cut(s) 1077
SinI GGWCC 3 cut(s) 257, 654, 1041
SlaI CTCGAG 1 cut(s) 742
SmiMI CAYNNNNRTG 1 cut(s) 513
SmlI CTYRAG 1 cut(s) 742
SmoI CTYRAG 1 cut(s) 742
SpeI ACTAGT 1 cut(s) 866
Sse9I AATT 4 cut(s) 147, 812, 1058, 1079
SseBI AGGCCT 2 cut(s) 437, 792
SspMI CTAG 3 cut(s) 179, 278, 867
StuI AGGCCT 2 cut(s) 437, 792
StyD4I CCNGG 9 cut(s) 19, 51, 252, 262, 357, 386, 432, 736, 1099
StyI CCWWGG 1 cut(s) 438
TaaI ACNGT 1 cut(s) 758
TaiI ACGT 1 cut(s) 1108
TaqI TCGA 4 cut(s) 425, 743, 852, 1077
TasI AATT 4 cut(s) 147, 812, 1058, 1079
TatI WGTACW 1 cut(s) 863
TauI GCSGC 5 cut(s) 365, 672, 705, 736, 925
TfiI GAWTC 2 cut(s) 628, 849
Tru1I TTAA 1 cut(s) 155
Tru9I TTAA 1 cut(s) 155
TscAI CASTG 2 cut(s) 33, 1009
TseI GCWGC 3 cut(s) 197, 695, 1054
TspDTI ATGAA 6 cut(s) 17, 143, 149, 620, 825, 1101
TspRI CASTG 2 cut(s) 33, 1009
Van91I CCANNNNNTGG 2 cut(s) 439, 932
VpaK11BI GGWCC 3 cut(s) 257, 654, 1041
XapI RAATTY 1 cut(s) 1079
XbaI TCTAGA 1 cut(s) 277
XceI RCATGY 1 cut(s) 39
XcmI CCANNNNNNNNNTGG 1 cut(s) 223
XhoI CTCGAG 1 cut(s) 742
XspI CTAG 3 cut(s) 179, 278, 867
ZrmI AGTACT 1 cut(s) 865
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.