ZINC FINGER protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g12011 FvH4_7g04251 |
| malus_domestica | MD07G1042100.v1.1 |
| prunus_persica | Prupe.2G048100_v2.0.a1 Prupe.2G048400_v2.0.a1 |
| pyrus_communis | pycom02g23410 |
| rosa_chinensis | RchiOBHm_Chr1g0328791 |
| rosa_laevigata | RLG00000008539 RLG00000029918 |
| rosa_multiflora | Rmu_co8270465.1_g000001 Rmu_sc0000652.1_g000003 Rmu_sc0004241.1_g000001 Rmu_sc0013419.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00321370 Rroxscaffold_5G00354150 |
| rosa_rugosa | Rorug01G0075900 Rorug04G0095500 |
| rosa_samantha | Rh1AG094600 Rh1BG075500 Rh1CG091900 Rh1DG097900 Rh4AG157200 Rh4BG156700 Rh4CG167200 Rh4DG150900 |
| rosa_wichuraiana | Rw1G007380 Rw4G012850 Rw4G012960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 110 |
| AclWI | GGATC | 2 cut(s) | 89, 155 |
| AfaI | GTAC | 1 cut(s) | 142 |
| AhlI | ACTAGT | 1 cut(s) | 68 |
| AlwI | GGATC | 2 cut(s) | 89, 155 |
| ApeKI | GCWGC | 1 cut(s) | 75 |
| BbvI | GCAGC | 1 cut(s) | 62 |
| BccI | CCATC | 1 cut(s) | 25 |
| BceAI | ACGGC | 1 cut(s) | 63 |
| BcuI | ACTAGT | 1 cut(s) | 68 |
| BfaI | CTAG | 2 cut(s) | 69, 144 |
| BisI | GCNGC | 1 cut(s) | 76 |
| BlsI | GCNGC | 1 cut(s) | 77 |
| BmcAI | AGTACT | 1 cut(s) | 142 |
| BsaJI | CCNNGG | 1 cut(s) | 79 |
| BsaWI | WCCGGW | 1 cut(s) | 97 |
| BseDI | CCNNGG | 1 cut(s) | 79 |
| BseRI | GAGGAG | 2 cut(s) | 34, 99 |
| BseXI | GCAGC | 1 cut(s) | 62 |
| BsiSI | CCGG | 1 cut(s) | 98 |
| BsmI | GAATGC | 1 cut(s) | 58 |
| Bsp143I | GATC | 2 cut(s) | 94, 160 |
| BspACI | CCGC | 1 cut(s) | 110 |
| BspPI | GGATC | 2 cut(s) | 89, 155 |
| BssECI | CCNNGG | 1 cut(s) | 79 |
| BssMI | GATC | 2 cut(s) | 94, 160 |
| BstDSI | CCRYGG | 1 cut(s) | 79 |
| BstKTI | GATC | 2 cut(s) | 97, 163 |
| BstMBI | GATC | 2 cut(s) | 94, 160 |
| BstV1I | GCAGC | 1 cut(s) | 62 |
| BtgI | CCRYGG | 1 cut(s) | 79 |
| BtgZI | GCGATG | 1 cut(s) | 162 |
| BtsIMutI | CAGTG | 1 cut(s) | 139 |
| Csp6I | GTAC | 1 cut(s) | 141 |
| CviJI | RGCY | 1 cut(s) | 8 |
| CviKI_1 | RGCY | 1 cut(s) | 8 |
| CviQI | GTAC | 1 cut(s) | 141 |
| DpnI | GATC | 2 cut(s) | 96, 162 |
| DpnII | GATC | 2 cut(s) | 94, 160 |
| FaiI | YATR | 2 cut(s) | 128, 166 |
| Fnu4HI | GCNGC | 1 cut(s) | 76 |
| Fsp4HI | GCNGC | 1 cut(s) | 76 |
| FspBI | CTAG | 2 cut(s) | 69, 144 |
| GluI | GCNGC | 1 cut(s) | 76 |
| HapII | CCGG | 1 cut(s) | 98 |
| HinfI | GANTC | 2 cut(s) | 122, 152 |
| HpaII | CCGG | 1 cut(s) | 98 |
| Hpy188III | TCNNGA | 1 cut(s) | 119 |
| HpyAV | CCTTC | 1 cut(s) | 100 |
| Kzo9I | GATC | 2 cut(s) | 94, 160 |
| LpnPI | CCDG | 1 cut(s) | 111 |
| Lsp1109I | GCAGC | 1 cut(s) | 62 |
| MaeI | CTAG | 2 cut(s) | 69, 144 |
| MalI | GATC | 2 cut(s) | 96, 162 |
| MboI | GATC | 2 cut(s) | 94, 160 |
| MboII | GAAGA | 1 cut(s) | 61 |
| MnlI | CCTC | 3 cut(s) | 12, 34, 77 |
| MspI | CCGG | 1 cut(s) | 98 |
| Mva1269I | GAATGC | 1 cut(s) | 58 |
| NdeII | GATC | 2 cut(s) | 94, 160 |
| PctI | GAATGC | 1 cut(s) | 58 |
| PfeI | GAWTC | 2 cut(s) | 122, 152 |
| PkrI | GCNGC | 1 cut(s) | 77 |
| RsaI | GTAC | 1 cut(s) | 142 |
| RsaNI | GTAC | 1 cut(s) | 141 |
| SatI | GCNGC | 1 cut(s) | 76 |
| Sau3AI | GATC | 2 cut(s) | 94, 160 |
| ScaI | AGTACT | 1 cut(s) | 142 |
| SgeI | CNNG | 5 cut(s) | 81, 92, 110, 131, 156 |
| SpeI | ACTAGT | 1 cut(s) | 68 |
| SsiI | CCGC | 1 cut(s) | 110 |
| SspMI | CTAG | 2 cut(s) | 69, 144 |
| TaqI | TCGA | 1 cut(s) | 118 |
| TatI | WGTACW | 1 cut(s) | 140 |
| TfiI | GAWTC | 2 cut(s) | 122, 152 |
| TscAI | CASTG | 1 cut(s) | 139 |
| TseI | GCWGC | 1 cut(s) | 75 |
| TspDTI | ATGAA | 1 cut(s) | 165 |
| TspRI | CASTG | 1 cut(s) | 139 |
| XspI | CTAG | 2 cut(s) | 69, 144 |
| ZrmI | AGTACT | 1 cut(s) | 142 |