Prupe.2G094400_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
14877758 .. 14881932
4175 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G094400.1

Sequence Viewer

Length: 2178 bp
ATGGAGTATGGATACTTTCAATTTCAATCAAGTCACCAGCAGGCCTTGAAATCGCTTGAAGCTCAGATGATTGAGCATAAGAAACTACTTGTGCAGTTGGAAGCTGAAAAGAGAGGGCTTAATGCATGTCTTGACAAGACTAAGGCTCAAAATTTAGATCTTGGGACGGAGCTTAAGCAGATGGAAGTTGATAAGATGGAGCTTAGAATGAGAGTGCTTCAGTTGCAGAAGGAAAAGGAACTTAATAACAAATATTTTTCTCAGAGAATGCTTGTGCTGCAGGGTGAAGTTGATCGGAACCAACAGCTTTGGGCTGACAAGGTGGATCTTATGAAGCAGATTGAGCAGCTTGGGGTAGATAAGCAAATCCTTGAGGAAGATGCTGAGCAGAGTGAGTGTTGGAGGAGAGAGCTTGAGGTGGAGCTTGAGGCGAGTGAGATTGAAAAGGGAGATATTGTAAAAGAGCTTAAGGAGATTCACGCTGAAAAGAAAAATCTTGAGGGACAGATTGAGAAGATGGAATATTATCAGAAAGAGATTAAGAAGAAACTTCTTGATCTGCAGGATGAAGCTGAGAAGAAAGAGCTTCAGAGCAAAGAGCTTAATCAGAAAGTGCTTAACCTGCAGAGTGAAGCTGTTCAAAACAAAAACCTTAAGAGTGATCTTGAGAAAACTCTTGCGGAGAGTGAAGCTGAAAAGAAAAAGCTTGAGGCGTTTCGGGGTGAAAAGGAAGATCTTGCGAAAGAGCTTCAGGAGATTCGGGCTCAAATGGGATATATTGTGGAAGACCTGGGGATGATTAAGGCTGAGATGGGAGATCTTGAGAGAGAGCTTTGGCGGAGTGAGGCTGATAAGACGGAGCTTGAGAAGAAAATGCTTGAGCTGAGTAGTCAAGTGAAGATTAAGGAGATTGAGAACAAAGACCTTAATGATAAATTGTTTCAGCTGTGGAGGGAAGCAGATCAAAACAAACTGCGTAATGATTATCTTGAGAAAAAGTTTGCGCATAGTGAACGTCGGACGAAAGAGCTTGTTGGGATTGAGATTGAAAAGAAACGTCTCGAGAAAGAACTCGAGGAGATTCGATCTAAAACGGGAGATCTTGTGTCAGAGCGTAAGCATAGTGAGACTGAGAAGGAGGAGCTTAAGCAGAAAGTGCTTGAGCTGGAGACTGAAGGTCGTCGAAACAAAACGCTTTTGAATGATCTTGAGAAAAAGCTTGAGCAGAGTGAATGTCAGAAGAAAGCTCTCAAAGAGGAGCTGGAGATGAATAAGCAATACCTCGACGAAGAACAACAGCACACTGTAAAAGCTTTTCATCGGAATGAGATGCAGTTGGATCAAATGAGGAATCTTAAAGAATTGCTTGAGAAGAGTGAGGCTCAGAATCAAAATCTTATGAAAGAGCTTCAGCAAACTGAAGCTGCAAAGTTAGGCCTTAAAAATGCTCTTGAGGGGAGTGAATTCCAGAAGAAGGACCTCCAGGAAGGCCTTCACAAAAATCTTGGGCAAATTATCAGGAAAATGGTTGAAAATAGTGAGACTCAGAAGGAACAGATTGTGCAAATGATTGAGCAGATTAAAGATGGAAAGCTGGATGCCGACAAAGCTCTCGAGGAGAGTGAACGCCAGAAGAAGGAGCTCAAGGAGGTGCTTGCAAAGAGTGAGGCTCAAAAGGAACATCTTGAGAAAGAGCTTGAGAAGATTGAAGATGAAAAGATACAGCTTAAGGAAGCTCTTGAGGAAAGTGAGCTGATGAAAAGACAACAAGTGATAGTTTTTGGCCAGAAGGAACAACTTGTGAAGGCAGAGCTTAACAAGAAAGTACTTCAGCTGCAGAATGAAGCTGATCAAAGCAAGGAGCTTAAGAAACGCCTTGAGCAAAAGCTAGGGCAGACTGAAATGCACAAGATATTACTTGAGAAAGCTCTTAAGGATAGAGATATTCAACTGCAAGAAATGAATCAGAGATTTGCTTTAGAGCAAAAGCATAATGAAGAAGTGGTGGCAGATTTGTCGAAAGAACTAAAGAATCAGGAGAGTTCGAAGAAAGAGATTACATCTATCAACAGTGAAATGGAGTATCTTCATTATGTCAACAAGAAAAGCACAGAAGAGTTGGATGTTGCTGATGTTGCTGCTGCTGATGATGATGACGATGATTGGCTTAAAGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

726

Amino Acids

85.55

Weight (kDa)

5.18

Isoelectric Point (pI)

54.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1005
Acc36I ACCTGC 1 cut(s) 630
AciI CCGC 2 cut(s) 680, 838
AclWI GGATC 2 cut(s) 333, 1347
AcoI YGGCCR 1 cut(s) 1783
AcsI RAATTY 2 cut(s) 151, 1463
AcuI CTGAAG 7 cut(s) 203, 572, 734, 1194, 1394, 1440, 1814
AfaI GTAC 1 cut(s) 1827
AfiI CCNNNNNNNGG 2 cut(s) 1474, 1636
AflII CTTAAG 7 cut(s) 173, 467, 653, 1145, 1727, 1865, 1931
AhdI GACNNNNNGTC 1 cut(s) 1176
AjnI CCWGG 2 cut(s) 789, 1482
Alw21I GWGCWC 1 cut(s) 1644
Alw26I GTCTC 4 cut(s) 1064, 1121, 1163, 1535
AlwI GGATC 2 cut(s) 333, 1347
Ama87I CYCGRG 3 cut(s) 1061, 1073, 1613
AoxI GGCC 4 cut(s) 42, 1435, 1489, 1783
ApeKI GCWGC 6 cut(s) 277, 346, 1424, 1834, 2138, 2141
ApoI RAATTY 2 cut(s) 151, 1463
Asp700I GAANNNNTTC 2 cut(s) 636, 1491
AspLEI GCGC 1 cut(s) 1006
AspS9I GGNCC 1 cut(s) 1477
AsuHPI GGTGA 3 cut(s) 26, 296, 734
AsuII TTCGAA 1 cut(s) 2045
AvaI CYCGRG 3 cut(s) 1061, 1073, 1613
AvaII GGWCC 1 cut(s) 1477
BalI TGGCCA 1 cut(s) 1785
BanII GRGCYC 2 cut(s) 766, 1644
BbsI GAAGAC 1 cut(s) 792
Bbv12I GWGCWC 1 cut(s) 1644
BbvI GCAGC 6 cut(s) 264, 358, 1411, 1821, 2125, 2128
BccI CCATC 5 cut(s) 175, 190, 511, 805, 1580
BcgI CGANNNNNNTGC 2 cut(s) 1998, 2032
BciT130I CCWGG 2 cut(s) 791, 1484
BciVI GTATCC 1 cut(s) 5
BclI TGATCA 1 cut(s) 1849
BcoDI GTCTC 4 cut(s) 1064, 1121, 1163, 1535
BfaI CTAG 1 cut(s) 1889
BfmI CTRYAG 4 cut(s) 278, 560, 623, 1835
BfrI CTTAAG 7 cut(s) 173, 467, 653, 1145, 1727, 1865, 1931
BfuAI ACCTGC 1 cut(s) 630
BfuI GTATCC 1 cut(s) 5
BglII AGATCT 4 cut(s) 157, 733, 817, 1099
BisI GCNGC 6 cut(s) 278, 347, 1425, 1835, 2139, 2142
BlpI GCTNAGC 1 cut(s) 384
BlsI GCNGC 6 cut(s) 279, 348, 1426, 1836, 2140, 2143
BmcAI AGTACT 1 cut(s) 1827
Bme1390I CCNGG 2 cut(s) 791, 1484
Bme18I GGWCC 1 cut(s) 1477
BmeRI GACNNNNNGTC 1 cut(s) 1176
BmeT110I CYCGRG 3 cut(s) 1061, 1073, 1613
BmgT120I GGNCC 1 cut(s) 1477
BmiI GGNNCC 1 cut(s) 299
BmrFI CCNGG 2 cut(s) 791, 1484
BmsI GCATC 3 cut(s) 370, 1320, 1588
BpiI GAAGAC 1 cut(s) 792
BplI GAGNNNNNCTC 4 cut(s) 1366, 1398, 1654, 1686
BpmI CTGGAG 3 cut(s) 1187, 1283, 1466
Bpu1102I GCTNAGC 1 cut(s) 384
Bpu14I TTCGAA 1 cut(s) 2045
BsaJI CCNNGG 1 cut(s) 790
BsaXI ACNNNNNCTCC 4 cut(s) 441, 471, 1089, 1119
Bsc4I CCNNNNNNNGG 2 cut(s) 1474, 1636
BseBI CCWGG 2 cut(s) 791, 1484
BseDI CCNNGG 1 cut(s) 790
BseGI GGATG 4 cut(s) 571, 801, 1603, 2128
BseLI CCNNNNNNNGG 2 cut(s) 1474, 1636
BseMII CTCAG 9 cut(s) 77, 275, 375, 564, 798, 875, 1122, 1397, 1559
BseRI GAGGAG 5 cut(s) 418, 1091, 1154, 1271, 1631
BseXI GCAGC 6 cut(s) 264, 358, 1411, 1821, 2125, 2128
BsgI GTGCAG 1 cut(s) 113
BshFI GGCC 4 cut(s) 44, 1437, 1491, 1785
BsiHKAI GWGCWC 1 cut(s) 1644
BsiHKCI CYCGRG 3 cut(s) 1061, 1073, 1613
BslFI GGGAC 2 cut(s) 178, 516
BslI CCNNNNNNNGG 2 cut(s) 1474, 1636
BsmAI GTCTC 4 cut(s) 1064, 1121, 1163, 1535
BsmBI CGTCTC 1 cut(s) 1064
BsmFI GGGAC 2 cut(s) 178, 516
BsmI GAATGC 1 cut(s) 273
BsnI GGCC 4 cut(s) 44, 1437, 1491, 1785
BsoBI CYCGRG 3 cut(s) 1061, 1073, 1613
Bsp119I TTCGAA 1 cut(s) 2045
Bsp1286I GDGCHC 2 cut(s) 766, 1644
Bsp1720I GCTNAGC 1 cut(s) 384
BspACI CCGC 2 cut(s) 680, 838
BspANI GGCC 4 cut(s) 44, 1437, 1491, 1785
BspCNI CTCAG 9 cut(s) 76, 274, 376, 565, 799, 876, 1123, 1396, 1558
BspLI GGNNCC 1 cut(s) 299
BspMAI CTGCAG 4 cut(s) 282, 564, 627, 1839
BspMI ACCTGC 1 cut(s) 630
BspPI GGATC 2 cut(s) 333, 1347
BspT104I TTCGAA 1 cut(s) 2045
BspTI CTTAAG 7 cut(s) 173, 467, 653, 1145, 1727, 1865, 1931
BssECI CCNNGG 1 cut(s) 790
Bst2UI CCWGG 2 cut(s) 791, 1484
Bst4CI ACNGT 2 cut(s) 1306, 2072
Bst6I CTCTTC 2 cut(s) 1367, 2109
BstAFI CTTAAG 7 cut(s) 173, 467, 653, 1145, 1727, 1865, 1931
BstAPI GCANNNNNTGC 1 cut(s) 1156
BstBI TTCGAA 1 cut(s) 2045
BstC8I GCNNGC 2 cut(s) 42, 1656
BstF5I GGATG 4 cut(s) 571, 801, 1603, 2128
BstHHI GCGC 1 cut(s) 1006
BstMAI GTCTC 4 cut(s) 1064, 1121, 1163, 1535
BstMWI GCNNNNNNNGC 7 cut(s) 223, 277, 343, 622, 1156, 1607, 2135
BstNI CCWGG 2 cut(s) 791, 1484
BstNSI RCATGY 1 cut(s) 129
BstSCI CCNGG 2 cut(s) 789, 1482
BstSFI CTRYAG 4 cut(s) 278, 560, 623, 1835
BstV1I GCAGC 6 cut(s) 264, 358, 1411, 1821, 2125, 2128
BstV2I GAAGAC 1 cut(s) 792
BstX2I RGATCY 5 cut(s) 157, 325, 733, 817, 1099
BstYI RGATCY 5 cut(s) 157, 325, 733, 817, 1099
BsuI GTATCC 1 cut(s) 5
BsuRI GGCC 4 cut(s) 44, 1437, 1491, 1785
BtsCI GGATG 4 cut(s) 571, 801, 1603, 2128
BtsIMutI CAGTG 2 cut(s) 1302, 2077
BveI ACCTGC 1 cut(s) 630
Cac8I GCNNGC 2 cut(s) 42, 1656
CfoI GCGC 1 cut(s) 1006
Cfr13I GGNCC 1 cut(s) 1477
Csp6I GTAC 1 cut(s) 1826
CviAII CATG 1 cut(s) 126
CviQI GTAC 1 cut(s) 1826
DriI GACNNNNNGTC 1 cut(s) 1176
EaeI YGGCCR 1 cut(s) 1783
Eam1104I CTCTTC 2 cut(s) 1367, 2109
Eam1105I GACNNNNNGTC 1 cut(s) 1176
EarI CTCTTC 2 cut(s) 1367, 2109
EciI GGCGGA 1 cut(s) 853
Ecl136II GAGCTC 1 cut(s) 1642
Eco147I AGGCCT 3 cut(s) 44, 1437, 1491
Eco24I GRGCYC 2 cut(s) 766, 1644
Eco47I GGWCC 1 cut(s) 1477
Eco53kI GAGCTC 1 cut(s) 1642
Eco57I CTGAAG 7 cut(s) 203, 572, 734, 1194, 1394, 1440, 1814
Eco88I CYCGRG 3 cut(s) 1061, 1073, 1613
EcoICRI GAGCTC 1 cut(s) 1642
EcoO109I RGGNCCY 1 cut(s) 1477
EcoRI GAATTC 1 cut(s) 1463
EcoRII CCWGG 2 cut(s) 789, 1482
EcoT22I ATGCAT 1 cut(s) 127
EcoT38I GRGCYC 2 cut(s) 766, 1644
Esp3I CGTCTC 1 cut(s) 1064
FaeI CATG 1 cut(s) 129
FalI AAGNNNNNCTT 2 cut(s) 1350, 1382
FaqI GGGAC 2 cut(s) 178, 516
FatI CATG 1 cut(s) 125
FbaI TGATCA 1 cut(s) 1849
Fnu4HI GCNGC 6 cut(s) 278, 347, 1425, 1835, 2139, 2142
FokI GGATG 4 cut(s) 578, 808, 1610, 2135
FriOI GRGCYC 2 cut(s) 766, 1644
Fsp4HI GCNGC 6 cut(s) 278, 347, 1425, 1835, 2139, 2142
FspBI CTAG 1 cut(s) 1889
FspI TGCGCA 1 cut(s) 1005
GlaI GCGC 1 cut(s) 1005
GluI GCNGC 6 cut(s) 278, 347, 1425, 1835, 2139, 2142
GsuI CTGGAG 3 cut(s) 1187, 1283, 1466
HaeIII GGCC 4 cut(s) 44, 1437, 1491, 1785
HhaI GCGC 1 cut(s) 1006
Hin1II CATG 1 cut(s) 129
Hin6I GCGC 1 cut(s) 1004
HinP1I GCGC 1 cut(s) 1004
HincII GTYRAC 1 cut(s) 2098
HindII GTYRAC 1 cut(s) 2098
HindIII AAGCTT 3 cut(s) 704, 1217, 1311
HinfI GANTC 8 cut(s) 475, 757, 1081, 1351, 1387, 1543, 1963, 2032
HphI GGTGA 3 cut(s) 26, 296, 734
Hpy166II GTNNAC 3 cut(s) 1013, 1625, 2098
Hpy8I GTNNAC 3 cut(s) 1013, 1625, 2098
Hpy99I CGWCG 3 cut(s) 1020, 1185, 1289
HpyCH4III ACNGT 2 cut(s) 1306, 2072
HpyCH4IV ACGT 2 cut(s) 1015, 1057
HpyF10VI GCNNNNNNNGC 7 cut(s) 223, 277, 343, 622, 1156, 1607, 2135
HpySE526I ACGT 2 cut(s) 1015, 1057
Hsp92II CATG 1 cut(s) 129
HspAI GCGC 1 cut(s) 1004
Ksp22I TGATCA 1 cut(s) 1849
LmnI GCTCC 8 cut(s) 169, 199, 421, 859, 1141, 1258, 1639, 1861
Lsp1109I GCAGC 6 cut(s) 264, 358, 1411, 1821, 2125, 2128
LweI GCATC 3 cut(s) 370, 1320, 1588
MaeI CTAG 1 cut(s) 1889
MaeII ACGT 2 cut(s) 1015, 1057
MaeIII GTNAC 1 cut(s) 32
MflI RGATCY 5 cut(s) 157, 325, 733, 817, 1099
MhlI GDGCHC 2 cut(s) 766, 1644
MlsI TGGCCA 1 cut(s) 1785
MluCI AATT 6 cut(s) 20, 151, 935, 1361, 1463, 1512
MluNI TGGCCA 1 cut(s) 1785
MlyI GAGTC 1 cut(s) 1537
MmeI TCCRAC 5 cut(s) 78, 380, 998, 1317, 2100
Mox20I TGGCCA 1 cut(s) 1785
Mph1103I ATGCAT 1 cut(s) 127
MroXI GAANNNNTTC 2 cut(s) 636, 1491
MscI TGGCCA 1 cut(s) 1785
MslI CAYNNNNRTG 1 cut(s) 1323
Msp20I TGGCCA 1 cut(s) 1785
MspA1I CMGCKG 2 cut(s) 946, 1834
MspCI CTTAAG 7 cut(s) 173, 467, 653, 1145, 1727, 1865, 1931
MspR9I CCNGG 2 cut(s) 791, 1484
Mva1269I GAATGC 1 cut(s) 273
MvaI CCWGG 2 cut(s) 791, 1484
MwoI GCNNNNNNNGC 7 cut(s) 223, 277, 343, 622, 1156, 1607, 2135
NlaIII CATG 1 cut(s) 129
NlaIV GGNNCC 1 cut(s) 299
NmuCI GTSAC 1 cut(s) 32
NsbI TGCGCA 1 cut(s) 1005
NsiI ATGCAT 1 cut(s) 127
NspI RCATGY 1 cut(s) 129
NspV TTCGAA 1 cut(s) 2045
PaeR7I CTCGAG 3 cut(s) 1061, 1073, 1613
PceI AGGCCT 3 cut(s) 44, 1437, 1491
PctI GAATGC 1 cut(s) 273
PdmI GAANNNNTTC 2 cut(s) 636, 1491
PfeI GAWTC 7 cut(s) 475, 757, 1081, 1351, 1387, 1963, 2032
PfoI TCCNGGA 1 cut(s) 1482
PkrI GCNGC 6 cut(s) 279, 348, 1426, 1836, 2140, 2143
PleI GAGTC 1 cut(s) 1537
PpsI GAGTC 1 cut(s) 1537
PpuMI RGGWCCY 1 cut(s) 1477
Psp124BI GAGCTC 1 cut(s) 1644
Psp5II RGGWCCY 1 cut(s) 1477
Psp6I CCWGG 2 cut(s) 789, 1482
PspGI CCWGG 2 cut(s) 789, 1482
PspN4I GGNNCC 1 cut(s) 299
PspPI GGNCC 1 cut(s) 1477
PspPPI RGGWCCY 1 cut(s) 1477
PspXI VCTCGAGB 1 cut(s) 1073
PstI CTGCAG 4 cut(s) 282, 564, 627, 1839
PsuI RGATCY 5 cut(s) 157, 325, 733, 817, 1099
PvuII CAGCTG 2 cut(s) 946, 1834
RsaI GTAC 1 cut(s) 1827
RsaNI GTAC 1 cut(s) 1826
RseI CAYNNNNRTG 1 cut(s) 1323
SacI GAGCTC 1 cut(s) 1644
SatI GCNGC 6 cut(s) 278, 347, 1425, 1835, 2139, 2142
Sau96I GGNCC 1 cut(s) 1477
ScaI AGTACT 1 cut(s) 1827
SchI GAGTC 1 cut(s) 1537
ScrFI CCNGG 2 cut(s) 791, 1484
SduI GDGCHC 2 cut(s) 766, 1644
SfaNI GCATC 3 cut(s) 370, 1320, 1588
SfcI CTRYAG 4 cut(s) 278, 560, 623, 1835
Sfr274I CTCGAG 3 cut(s) 1061, 1073, 1613
SfuI TTCGAA 1 cut(s) 2045
SinI GGWCC 1 cut(s) 1477
SlaI CTCGAG 3 cut(s) 1061, 1073, 1613
SmiMI CAYNNNNRTG 1 cut(s) 1323
Sse9I AATT 6 cut(s) 20, 151, 935, 1361, 1463, 1512
SseBI AGGCCT 3 cut(s) 44, 1437, 1491
SsiI CCGC 2 cut(s) 680, 838
SspI AATATT 2 cut(s) 254, 524
SspMI CTAG 1 cut(s) 1889
SstI GAGCTC 1 cut(s) 1644
StuI AGGCCT 3 cut(s) 44, 1437, 1491
StyD4I CCNGG 2 cut(s) 789, 1482
TaaI ACNGT 2 cut(s) 1306, 2072
TaiI ACGT 2 cut(s) 1018, 1060
TaqI TCGA 8 cut(s) 1062, 1074, 1084, 1183, 1284, 1614, 2018, 2045
TasI AATT 6 cut(s) 20, 151, 935, 1361, 1463, 1512
TatI WGTACW 1 cut(s) 1825
TfiI GAWTC 7 cut(s) 475, 757, 1081, 1351, 1387, 1963, 2032
TscAI CASTG 2 cut(s) 1309, 2077
TseFI GTSAC 1 cut(s) 32
TseI GCWGC 6 cut(s) 277, 346, 1424, 1834, 2138, 2141
Tsp45I GTSAC 1 cut(s) 32
TspGWI ACGGA 2 cut(s) 182, 872
TspRI CASTG 2 cut(s) 1309, 2077
Vha464I CTTAAG 7 cut(s) 173, 467, 653, 1145, 1727, 1865, 1931
VpaK11BI GGWCC 1 cut(s) 1477
XapI RAATTY 2 cut(s) 151, 1463
XceI RCATGY 1 cut(s) 129
XhoI CTCGAG 3 cut(s) 1061, 1073, 1613
XmnI GAANNNNTTC 2 cut(s) 636, 1491
XspI CTAG 1 cut(s) 1889
ZrmI AGTACT 1 cut(s) 1827
Zsp2I ATGCAT 1 cut(s) 127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.