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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g06620 FvH4_7g06640 FvH4_7g06640 |
| malus_domestica | MD02G1237600.v1.1 |
| prunus_persica | Prupe.2G094400_v2.0.a1 |
| pyrus_communis | pycom02g20830 |
| rosa_chinensis | RchiOBHm_Chr1g0335321 |
| rosa_laevigata | RLG00000029379 RLG00000029388 |
| rosa_multiflora | Rmu_sc0001268.1_g000007 Rmu_sc0001790.1_g000013 Rmu_sc0003404.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00315990 Rroxscaffold_4G00316030 |
| rosa_rugosa | Rorug01G0122000 Rorug01G0122100 Rorug01G0122600 Rorug01G0122700 Rorug01G0122800 |
| rosa_samantha | Rh1AG143300 Rh1AG143600 Rh1BG112200 Rh1BG112600 Rh1CG134900 Rh1CG135200 Rh1DG148900 Rh1DG149300 |
| rosa_wichuraiana | Rw0G009190 Rw0G009240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1005 |
| Acc36I | ACCTGC | 1 cut(s) | 630 |
| AciI | CCGC | 2 cut(s) | 680, 838 |
| AclWI | GGATC | 2 cut(s) | 333, 1347 |
| AcoI | YGGCCR | 1 cut(s) | 1783 |
| AcsI | RAATTY | 2 cut(s) | 151, 1463 |
| AcuI | CTGAAG | 7 cut(s) | 203, 572, 734, 1194, 1394, 1440, 1814 |
| AfaI | GTAC | 1 cut(s) | 1827 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1474, 1636 |
| AflII | CTTAAG | 7 cut(s) | 173, 467, 653, 1145, 1727, 1865, 1931 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1176 |
| AjnI | CCWGG | 2 cut(s) | 789, 1482 |
| Alw21I | GWGCWC | 1 cut(s) | 1644 |
| Alw26I | GTCTC | 4 cut(s) | 1064, 1121, 1163, 1535 |
| AlwI | GGATC | 2 cut(s) | 333, 1347 |
| Ama87I | CYCGRG | 3 cut(s) | 1061, 1073, 1613 |
| AoxI | GGCC | 4 cut(s) | 42, 1435, 1489, 1783 |
| ApeKI | GCWGC | 6 cut(s) | 277, 346, 1424, 1834, 2138, 2141 |
| ApoI | RAATTY | 2 cut(s) | 151, 1463 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 636, 1491 |
| AspLEI | GCGC | 1 cut(s) | 1006 |
| AspS9I | GGNCC | 1 cut(s) | 1477 |
| AsuHPI | GGTGA | 3 cut(s) | 26, 296, 734 |
| AsuII | TTCGAA | 1 cut(s) | 2045 |
| AvaI | CYCGRG | 3 cut(s) | 1061, 1073, 1613 |
| AvaII | GGWCC | 1 cut(s) | 1477 |
| BalI | TGGCCA | 1 cut(s) | 1785 |
| BanII | GRGCYC | 2 cut(s) | 766, 1644 |
| BbsI | GAAGAC | 1 cut(s) | 792 |
| Bbv12I | GWGCWC | 1 cut(s) | 1644 |
| BbvI | GCAGC | 6 cut(s) | 264, 358, 1411, 1821, 2125, 2128 |
| BccI | CCATC | 5 cut(s) | 175, 190, 511, 805, 1580 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1998, 2032 |
| BciT130I | CCWGG | 2 cut(s) | 791, 1484 |
| BciVI | GTATCC | 1 cut(s) | 5 |
| BclI | TGATCA | 1 cut(s) | 1849 |
| BcoDI | GTCTC | 4 cut(s) | 1064, 1121, 1163, 1535 |
| BfaI | CTAG | 1 cut(s) | 1889 |
| BfmI | CTRYAG | 4 cut(s) | 278, 560, 623, 1835 |
| BfrI | CTTAAG | 7 cut(s) | 173, 467, 653, 1145, 1727, 1865, 1931 |
| BfuAI | ACCTGC | 1 cut(s) | 630 |
| BfuI | GTATCC | 1 cut(s) | 5 |
| BglII | AGATCT | 4 cut(s) | 157, 733, 817, 1099 |
| BisI | GCNGC | 6 cut(s) | 278, 347, 1425, 1835, 2139, 2142 |
| BlpI | GCTNAGC | 1 cut(s) | 384 |
| BlsI | GCNGC | 6 cut(s) | 279, 348, 1426, 1836, 2140, 2143 |
| BmcAI | AGTACT | 1 cut(s) | 1827 |
| Bme1390I | CCNGG | 2 cut(s) | 791, 1484 |
| Bme18I | GGWCC | 1 cut(s) | 1477 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1176 |
| BmeT110I | CYCGRG | 3 cut(s) | 1061, 1073, 1613 |
| BmgT120I | GGNCC | 1 cut(s) | 1477 |
| BmiI | GGNNCC | 1 cut(s) | 299 |
| BmrFI | CCNGG | 2 cut(s) | 791, 1484 |
| BmsI | GCATC | 3 cut(s) | 370, 1320, 1588 |
| BpiI | GAAGAC | 1 cut(s) | 792 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1366, 1398, 1654, 1686 |
| BpmI | CTGGAG | 3 cut(s) | 1187, 1283, 1466 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 384 |
| Bpu14I | TTCGAA | 1 cut(s) | 2045 |
| BsaJI | CCNNGG | 1 cut(s) | 790 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 441, 471, 1089, 1119 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1474, 1636 |
| BseBI | CCWGG | 2 cut(s) | 791, 1484 |
| BseDI | CCNNGG | 1 cut(s) | 790 |
| BseGI | GGATG | 4 cut(s) | 571, 801, 1603, 2128 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1474, 1636 |
| BseMII | CTCAG | 9 cut(s) | 77, 275, 375, 564, 798, 875, 1122, 1397, 1559 |
| BseRI | GAGGAG | 5 cut(s) | 418, 1091, 1154, 1271, 1631 |
| BseXI | GCAGC | 6 cut(s) | 264, 358, 1411, 1821, 2125, 2128 |
| BsgI | GTGCAG | 1 cut(s) | 113 |
| BshFI | GGCC | 4 cut(s) | 44, 1437, 1491, 1785 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1644 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1061, 1073, 1613 |
| BslFI | GGGAC | 2 cut(s) | 178, 516 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1474, 1636 |
| BsmAI | GTCTC | 4 cut(s) | 1064, 1121, 1163, 1535 |
| BsmBI | CGTCTC | 1 cut(s) | 1064 |
| BsmFI | GGGAC | 2 cut(s) | 178, 516 |
| BsmI | GAATGC | 1 cut(s) | 273 |
| BsnI | GGCC | 4 cut(s) | 44, 1437, 1491, 1785 |
| BsoBI | CYCGRG | 3 cut(s) | 1061, 1073, 1613 |
| Bsp119I | TTCGAA | 1 cut(s) | 2045 |
| Bsp1286I | GDGCHC | 2 cut(s) | 766, 1644 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 384 |
| BspACI | CCGC | 2 cut(s) | 680, 838 |
| BspANI | GGCC | 4 cut(s) | 44, 1437, 1491, 1785 |
| BspCNI | CTCAG | 9 cut(s) | 76, 274, 376, 565, 799, 876, 1123, 1396, 1558 |
| BspLI | GGNNCC | 1 cut(s) | 299 |
| BspMAI | CTGCAG | 4 cut(s) | 282, 564, 627, 1839 |
| BspMI | ACCTGC | 1 cut(s) | 630 |
| BspPI | GGATC | 2 cut(s) | 333, 1347 |
| BspT104I | TTCGAA | 1 cut(s) | 2045 |
| BspTI | CTTAAG | 7 cut(s) | 173, 467, 653, 1145, 1727, 1865, 1931 |
| BssECI | CCNNGG | 1 cut(s) | 790 |
| Bst2UI | CCWGG | 2 cut(s) | 791, 1484 |
| Bst4CI | ACNGT | 2 cut(s) | 1306, 2072 |
| Bst6I | CTCTTC | 2 cut(s) | 1367, 2109 |
| BstAFI | CTTAAG | 7 cut(s) | 173, 467, 653, 1145, 1727, 1865, 1931 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1156 |
| BstBI | TTCGAA | 1 cut(s) | 2045 |
| BstC8I | GCNNGC | 2 cut(s) | 42, 1656 |
| BstF5I | GGATG | 4 cut(s) | 571, 801, 1603, 2128 |
| BstHHI | GCGC | 1 cut(s) | 1006 |
| BstMAI | GTCTC | 4 cut(s) | 1064, 1121, 1163, 1535 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 223, 277, 343, 622, 1156, 1607, 2135 |
| BstNI | CCWGG | 2 cut(s) | 791, 1484 |
| BstNSI | RCATGY | 1 cut(s) | 129 |
| BstSCI | CCNGG | 2 cut(s) | 789, 1482 |
| BstSFI | CTRYAG | 4 cut(s) | 278, 560, 623, 1835 |
| BstV1I | GCAGC | 6 cut(s) | 264, 358, 1411, 1821, 2125, 2128 |
| BstV2I | GAAGAC | 1 cut(s) | 792 |
| BstX2I | RGATCY | 5 cut(s) | 157, 325, 733, 817, 1099 |
| BstYI | RGATCY | 5 cut(s) | 157, 325, 733, 817, 1099 |
| BsuI | GTATCC | 1 cut(s) | 5 |
| BsuRI | GGCC | 4 cut(s) | 44, 1437, 1491, 1785 |
| BtsCI | GGATG | 4 cut(s) | 571, 801, 1603, 2128 |
| BtsIMutI | CAGTG | 2 cut(s) | 1302, 2077 |
| BveI | ACCTGC | 1 cut(s) | 630 |
| Cac8I | GCNNGC | 2 cut(s) | 42, 1656 |
| CfoI | GCGC | 1 cut(s) | 1006 |
| Cfr13I | GGNCC | 1 cut(s) | 1477 |
| Csp6I | GTAC | 1 cut(s) | 1826 |
| CviAII | CATG | 1 cut(s) | 126 |
| CviQI | GTAC | 1 cut(s) | 1826 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1176 |
| EaeI | YGGCCR | 1 cut(s) | 1783 |
| Eam1104I | CTCTTC | 2 cut(s) | 1367, 2109 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1176 |
| EarI | CTCTTC | 2 cut(s) | 1367, 2109 |
| EciI | GGCGGA | 1 cut(s) | 853 |
| Ecl136II | GAGCTC | 1 cut(s) | 1642 |
| Eco147I | AGGCCT | 3 cut(s) | 44, 1437, 1491 |
| Eco24I | GRGCYC | 2 cut(s) | 766, 1644 |
| Eco47I | GGWCC | 1 cut(s) | 1477 |
| Eco53kI | GAGCTC | 1 cut(s) | 1642 |
| Eco57I | CTGAAG | 7 cut(s) | 203, 572, 734, 1194, 1394, 1440, 1814 |
| Eco88I | CYCGRG | 3 cut(s) | 1061, 1073, 1613 |
| EcoICRI | GAGCTC | 1 cut(s) | 1642 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1477 |
| EcoRI | GAATTC | 1 cut(s) | 1463 |
| EcoRII | CCWGG | 2 cut(s) | 789, 1482 |
| EcoT22I | ATGCAT | 1 cut(s) | 127 |
| EcoT38I | GRGCYC | 2 cut(s) | 766, 1644 |
| Esp3I | CGTCTC | 1 cut(s) | 1064 |
| FaeI | CATG | 1 cut(s) | 129 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1350, 1382 |
| FaqI | GGGAC | 2 cut(s) | 178, 516 |
| FatI | CATG | 1 cut(s) | 125 |
| FbaI | TGATCA | 1 cut(s) | 1849 |
| Fnu4HI | GCNGC | 6 cut(s) | 278, 347, 1425, 1835, 2139, 2142 |
| FokI | GGATG | 4 cut(s) | 578, 808, 1610, 2135 |
| FriOI | GRGCYC | 2 cut(s) | 766, 1644 |
| Fsp4HI | GCNGC | 6 cut(s) | 278, 347, 1425, 1835, 2139, 2142 |
| FspBI | CTAG | 1 cut(s) | 1889 |
| FspI | TGCGCA | 1 cut(s) | 1005 |
| GlaI | GCGC | 1 cut(s) | 1005 |
| GluI | GCNGC | 6 cut(s) | 278, 347, 1425, 1835, 2139, 2142 |
| GsuI | CTGGAG | 3 cut(s) | 1187, 1283, 1466 |
| HaeIII | GGCC | 4 cut(s) | 44, 1437, 1491, 1785 |
| HhaI | GCGC | 1 cut(s) | 1006 |
| Hin1II | CATG | 1 cut(s) | 129 |
| Hin6I | GCGC | 1 cut(s) | 1004 |
| HinP1I | GCGC | 1 cut(s) | 1004 |
| HincII | GTYRAC | 1 cut(s) | 2098 |
| HindII | GTYRAC | 1 cut(s) | 2098 |
| HindIII | AAGCTT | 3 cut(s) | 704, 1217, 1311 |
| HinfI | GANTC | 8 cut(s) | 475, 757, 1081, 1351, 1387, 1543, 1963, 2032 |
| HphI | GGTGA | 3 cut(s) | 26, 296, 734 |
| Hpy166II | GTNNAC | 3 cut(s) | 1013, 1625, 2098 |
| Hpy8I | GTNNAC | 3 cut(s) | 1013, 1625, 2098 |
| Hpy99I | CGWCG | 3 cut(s) | 1020, 1185, 1289 |
| HpyCH4III | ACNGT | 2 cut(s) | 1306, 2072 |
| HpyCH4IV | ACGT | 2 cut(s) | 1015, 1057 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 223, 277, 343, 622, 1156, 1607, 2135 |
| HpySE526I | ACGT | 2 cut(s) | 1015, 1057 |
| Hsp92II | CATG | 1 cut(s) | 129 |
| HspAI | GCGC | 1 cut(s) | 1004 |
| Ksp22I | TGATCA | 1 cut(s) | 1849 |
| LmnI | GCTCC | 8 cut(s) | 169, 199, 421, 859, 1141, 1258, 1639, 1861 |
| Lsp1109I | GCAGC | 6 cut(s) | 264, 358, 1411, 1821, 2125, 2128 |
| LweI | GCATC | 3 cut(s) | 370, 1320, 1588 |
| MaeI | CTAG | 1 cut(s) | 1889 |
| MaeII | ACGT | 2 cut(s) | 1015, 1057 |
| MaeIII | GTNAC | 1 cut(s) | 32 |
| MflI | RGATCY | 5 cut(s) | 157, 325, 733, 817, 1099 |
| MhlI | GDGCHC | 2 cut(s) | 766, 1644 |
| MlsI | TGGCCA | 1 cut(s) | 1785 |
| MluCI | AATT | 6 cut(s) | 20, 151, 935, 1361, 1463, 1512 |
| MluNI | TGGCCA | 1 cut(s) | 1785 |
| MlyI | GAGTC | 1 cut(s) | 1537 |
| MmeI | TCCRAC | 5 cut(s) | 78, 380, 998, 1317, 2100 |
| Mox20I | TGGCCA | 1 cut(s) | 1785 |
| Mph1103I | ATGCAT | 1 cut(s) | 127 |
| MroXI | GAANNNNTTC | 2 cut(s) | 636, 1491 |
| MscI | TGGCCA | 1 cut(s) | 1785 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1323 |
| Msp20I | TGGCCA | 1 cut(s) | 1785 |
| MspA1I | CMGCKG | 2 cut(s) | 946, 1834 |
| MspCI | CTTAAG | 7 cut(s) | 173, 467, 653, 1145, 1727, 1865, 1931 |
| MspR9I | CCNGG | 2 cut(s) | 791, 1484 |
| Mva1269I | GAATGC | 1 cut(s) | 273 |
| MvaI | CCWGG | 2 cut(s) | 791, 1484 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 223, 277, 343, 622, 1156, 1607, 2135 |
| NlaIII | CATG | 1 cut(s) | 129 |
| NlaIV | GGNNCC | 1 cut(s) | 299 |
| NmuCI | GTSAC | 1 cut(s) | 32 |
| NsbI | TGCGCA | 1 cut(s) | 1005 |
| NsiI | ATGCAT | 1 cut(s) | 127 |
| NspI | RCATGY | 1 cut(s) | 129 |
| NspV | TTCGAA | 1 cut(s) | 2045 |
| PaeR7I | CTCGAG | 3 cut(s) | 1061, 1073, 1613 |
| PceI | AGGCCT | 3 cut(s) | 44, 1437, 1491 |
| PctI | GAATGC | 1 cut(s) | 273 |
| PdmI | GAANNNNTTC | 2 cut(s) | 636, 1491 |
| PfeI | GAWTC | 7 cut(s) | 475, 757, 1081, 1351, 1387, 1963, 2032 |
| PfoI | TCCNGGA | 1 cut(s) | 1482 |
| PkrI | GCNGC | 6 cut(s) | 279, 348, 1426, 1836, 2140, 2143 |
| PleI | GAGTC | 1 cut(s) | 1537 |
| PpsI | GAGTC | 1 cut(s) | 1537 |
| PpuMI | RGGWCCY | 1 cut(s) | 1477 |
| Psp124BI | GAGCTC | 1 cut(s) | 1644 |
| Psp5II | RGGWCCY | 1 cut(s) | 1477 |
| Psp6I | CCWGG | 2 cut(s) | 789, 1482 |
| PspGI | CCWGG | 2 cut(s) | 789, 1482 |
| PspN4I | GGNNCC | 1 cut(s) | 299 |
| PspPI | GGNCC | 1 cut(s) | 1477 |
| PspPPI | RGGWCCY | 1 cut(s) | 1477 |
| PspXI | VCTCGAGB | 1 cut(s) | 1073 |
| PstI | CTGCAG | 4 cut(s) | 282, 564, 627, 1839 |
| PsuI | RGATCY | 5 cut(s) | 157, 325, 733, 817, 1099 |
| PvuII | CAGCTG | 2 cut(s) | 946, 1834 |
| RsaI | GTAC | 1 cut(s) | 1827 |
| RsaNI | GTAC | 1 cut(s) | 1826 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1323 |
| SacI | GAGCTC | 1 cut(s) | 1644 |
| SatI | GCNGC | 6 cut(s) | 278, 347, 1425, 1835, 2139, 2142 |
| Sau96I | GGNCC | 1 cut(s) | 1477 |
| ScaI | AGTACT | 1 cut(s) | 1827 |
| SchI | GAGTC | 1 cut(s) | 1537 |
| ScrFI | CCNGG | 2 cut(s) | 791, 1484 |
| SduI | GDGCHC | 2 cut(s) | 766, 1644 |
| SfaNI | GCATC | 3 cut(s) | 370, 1320, 1588 |
| SfcI | CTRYAG | 4 cut(s) | 278, 560, 623, 1835 |
| Sfr274I | CTCGAG | 3 cut(s) | 1061, 1073, 1613 |
| SfuI | TTCGAA | 1 cut(s) | 2045 |
| SinI | GGWCC | 1 cut(s) | 1477 |
| SlaI | CTCGAG | 3 cut(s) | 1061, 1073, 1613 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1323 |
| Sse9I | AATT | 6 cut(s) | 20, 151, 935, 1361, 1463, 1512 |
| SseBI | AGGCCT | 3 cut(s) | 44, 1437, 1491 |
| SsiI | CCGC | 2 cut(s) | 680, 838 |
| SspI | AATATT | 2 cut(s) | 254, 524 |
| SspMI | CTAG | 1 cut(s) | 1889 |
| SstI | GAGCTC | 1 cut(s) | 1644 |
| StuI | AGGCCT | 3 cut(s) | 44, 1437, 1491 |
| StyD4I | CCNGG | 2 cut(s) | 789, 1482 |
| TaaI | ACNGT | 2 cut(s) | 1306, 2072 |
| TaiI | ACGT | 2 cut(s) | 1018, 1060 |
| TaqI | TCGA | 8 cut(s) | 1062, 1074, 1084, 1183, 1284, 1614, 2018, 2045 |
| TasI | AATT | 6 cut(s) | 20, 151, 935, 1361, 1463, 1512 |
| TatI | WGTACW | 1 cut(s) | 1825 |
| TfiI | GAWTC | 7 cut(s) | 475, 757, 1081, 1351, 1387, 1963, 2032 |
| TscAI | CASTG | 2 cut(s) | 1309, 2077 |
| TseFI | GTSAC | 1 cut(s) | 32 |
| TseI | GCWGC | 6 cut(s) | 277, 346, 1424, 1834, 2138, 2141 |
| Tsp45I | GTSAC | 1 cut(s) | 32 |
| TspGWI | ACGGA | 2 cut(s) | 182, 872 |
| TspRI | CASTG | 2 cut(s) | 1309, 2077 |
| Vha464I | CTTAAG | 7 cut(s) | 173, 467, 653, 1145, 1727, 1865, 1931 |
| VpaK11BI | GGWCC | 1 cut(s) | 1477 |
| XapI | RAATTY | 2 cut(s) | 151, 1463 |
| XceI | RCATGY | 1 cut(s) | 129 |
| XhoI | CTCGAG | 3 cut(s) | 1061, 1073, 1613 |
| XmnI | GAANNNNTTC | 2 cut(s) | 636, 1491 |
| XspI | CTAG | 1 cut(s) | 1889 |
| ZrmI | AGTACT | 1 cut(s) | 1827 |
| Zsp2I | ATGCAT | 1 cut(s) | 127 |