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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g06620 FvH4_7g06640 FvH4_7g06640 |
| malus_domestica | MD02G1237600.v1.1 |
| prunus_persica | Prupe.2G094400_v2.0.a1 |
| pyrus_communis | pycom02g20830 |
| rosa_chinensis | RchiOBHm_Chr1g0335321 |
| rosa_laevigata | RLG00000029379 RLG00000029388 |
| rosa_multiflora | Rmu_sc0001268.1_g000007 Rmu_sc0001790.1_g000013 Rmu_sc0003404.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00315990 Rroxscaffold_4G00316030 |
| rosa_rugosa | Rorug01G0122000 Rorug01G0122100 Rorug01G0122600 Rorug01G0122700 Rorug01G0122800 |
| rosa_samantha | Rh1AG143300 Rh1AG143600 Rh1BG112200 Rh1BG112600 Rh1CG134900 Rh1CG135200 Rh1DG148900 Rh1DG149300 |
| rosa_wichuraiana | Rw0G009190 Rw0G009240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 726 |
| AccI | GTMKAC | 1 cut(s) | 198 |
| AciI | CCGC | 2 cut(s) | 1268, 1565 |
| AclWI | GGATC | 1 cut(s) | 1856 |
| AcsI | RAATTY | 2 cut(s) | 1132, 1950 |
| AcuI | CTGAAG | 6 cut(s) | 317, 389, 926, 1095, 1389, 1688 |
| AfaI | GTAC | 1 cut(s) | 149 |
| AflII | CTTAAG | 8 cut(s) | 338, 563, 605, 752, 1052, 1346, 1388, 1430 |
| Alw21I | GWGCWC | 1 cut(s) | 1065 |
| Alw26I | GTCTC | 3 cut(s) | 230, 545, 1206 |
| AlwI | GGATC | 1 cut(s) | 1856 |
| Ama87I | CYCGRG | 2 cut(s) | 1064, 1253 |
| ApeKI | GCWGC | 3 cut(s) | 188, 1708, 1870 |
| ApoI | RAATTY | 2 cut(s) | 1132, 1950 |
| AseI | ATTAAT | 1 cut(s) | 495 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 939, 1839 |
| AspLEI | GCGC | 3 cut(s) | 265, 727, 823 |
| AsuHPI | GGTGA | 3 cut(s) | 17, 461, 1678 |
| AsuNHI | GCTAGC | 1 cut(s) | 1642 |
| AvaI | CYCGRG | 2 cut(s) | 1064, 1253 |
| AxyI | CCTNAGG | 1 cut(s) | 157 |
| BanII | GRGCYC | 1 cut(s) | 1065 |
| BbsI | GAAGAC | 2 cut(s) | 297, 1053 |
| Bbv12I | GWGCWC | 1 cut(s) | 1065 |
| BbvI | GCAGC | 3 cut(s) | 175, 1720, 1882 |
| BccI | CCATC | 1 cut(s) | 1678 |
| BceAI | ACGGC | 1 cut(s) | 953 |
| BclI | TGATCA | 2 cut(s) | 1402, 1608 |
| BcoDI | GTCTC | 3 cut(s) | 230, 545, 1206 |
| BfaI | CTAG | 3 cut(s) | 1505, 1643, 1718 |
| BfmI | CTRYAG | 1 cut(s) | 98 |
| BfoI | RGCGCY | 1 cut(s) | 266 |
| BfrI | CTTAAG | 8 cut(s) | 338, 563, 605, 752, 1052, 1346, 1388, 1430 |
| BglII | AGATCT | 9 cut(s) | 346, 517, 601, 874, 1237, 1279, 1300, 1384, 1426 |
| BisI | GCNGC | 3 cut(s) | 189, 1709, 1871 |
| BlsI | GCNGC | 3 cut(s) | 190, 1710, 1872 |
| BmeT110I | CYCGRG | 2 cut(s) | 1064, 1253 |
| BmsI | GCATC | 3 cut(s) | 1108, 1444, 1927 |
| BmtI | GCTAGC | 1 cut(s) | 1646 |
| BpiI | GAAGAC | 2 cut(s) | 297, 1053 |
| BpmI | CTGGAG | 1 cut(s) | 130 |
| BsaI | GGTCTC | 1 cut(s) | 230 |
| Bse1I | ACTGG | 2 cut(s) | 113, 1737 |
| Bse21I | CCTNAGG | 1 cut(s) | 157 |
| Bse3DI | GCAATG | 1 cut(s) | 1823 |
| BseMI | GCAATG | 1 cut(s) | 1823 |
| BseMII | CTCAG | 4 cut(s) | 171, 429, 447, 540 |
| BseNI | ACTGG | 2 cut(s) | 113, 1737 |
| BseRI | GAGGAG | 4 cut(s) | 824, 971, 1208, 1271 |
| BseXI | GCAGC | 3 cut(s) | 175, 1720, 1882 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1065 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1064, 1253 |
| BsmAI | GTCTC | 3 cut(s) | 230, 545, 1206 |
| BsmBI | CGTCTC | 1 cut(s) | 1206 |
| Bso31I | GGTCTC | 1 cut(s) | 230 |
| BsoBI | CYCGRG | 2 cut(s) | 1064, 1253 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1065 |
| BspACI | CCGC | 2 cut(s) | 1268, 1565 |
| BspCNI | CTCAG | 4 cut(s) | 170, 430, 448, 541 |
| BspHI | TCATGA | 1 cut(s) | 255 |
| BspOI | GCTAGC | 1 cut(s) | 1646 |
| BspPI | GGATC | 1 cut(s) | 1856 |
| BspQI | GCTCTTC | 2 cut(s) | 66, 327 |
| BspTI | CTTAAG | 8 cut(s) | 338, 563, 605, 752, 1052, 1346, 1388, 1430 |
| BspTNI | GGTCTC | 1 cut(s) | 230 |
| BsrDI | GCAATG | 1 cut(s) | 1823 |
| BsrI | ACTGG | 2 cut(s) | 113, 1737 |
| Bst4CI | ACNGT | 4 cut(s) | 127, 170, 556, 631 |
| Bst6I | CTCTTC | 8 cut(s) | 66, 293, 327, 392, 678, 711, 764, 1106 |
| BstAFI | CTTAAG | 8 cut(s) | 338, 563, 605, 752, 1052, 1346, 1388, 1430 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1024 |
| BstC8I | GCNNGC | 5 cut(s) | 225, 229, 1644, 1791, 1814 |
| BstDEI | CTNAG | 4 cut(s) | 157, 438, 456, 549 |
| BstH2I | RGCGCY | 1 cut(s) | 266 |
| BstHHI | GCGC | 3 cut(s) | 265, 727, 823 |
| BstMAI | GTCTC | 3 cut(s) | 230, 545, 1206 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1024, 1337, 1799 |
| BstSFI | CTRYAG | 1 cut(s) | 98 |
| BstV1I | GCAGC | 3 cut(s) | 175, 1720, 1882 |
| BstV2I | GAAGAC | 2 cut(s) | 297, 1053 |
| BstX2I | RGATCY | 9 cut(s) | 346, 517, 601, 874, 1237, 1279, 1300, 1384, 1426 |
| BstYI | RGATCY | 9 cut(s) | 346, 517, 601, 874, 1237, 1279, 1300, 1384, 1426 |
| Bsu36I | CCTNAGG | 1 cut(s) | 157 |
| BtsIMutI | CAGTG | 1 cut(s) | 175 |
| Cac8I | GCNNGC | 5 cut(s) | 225, 229, 1644, 1791, 1814 |
| CciI | TCATGA | 1 cut(s) | 255 |
| CfoI | GCGC | 3 cut(s) | 265, 727, 823 |
| Csp6I | GTAC | 1 cut(s) | 148 |
| CviAII | CATG | 2 cut(s) | 256, 374 |
| CviQI | GTAC | 1 cut(s) | 148 |
| DdeI | CTNAG | 4 cut(s) | 157, 438, 456, 549 |
| DraI | TTTAAA | 3 cut(s) | 1543, 1618, 1693 |
| Eam1104I | CTCTTC | 8 cut(s) | 66, 293, 327, 392, 678, 711, 764, 1106 |
| EarI | CTCTTC | 8 cut(s) | 66, 293, 327, 392, 678, 711, 764, 1106 |
| Ecl136II | GAGCTC | 1 cut(s) | 1063 |
| Eco24I | GRGCYC | 1 cut(s) | 1065 |
| Eco31I | GGTCTC | 1 cut(s) | 230 |
| Eco53kI | GAGCTC | 1 cut(s) | 1063 |
| Eco57I | CTGAAG | 6 cut(s) | 317, 389, 926, 1095, 1389, 1688 |
| Eco81I | CCTNAGG | 1 cut(s) | 157 |
| Eco88I | CYCGRG | 2 cut(s) | 1064, 1253 |
| EcoICRI | GAGCTC | 1 cut(s) | 1063 |
| EcoT38I | GRGCYC | 1 cut(s) | 1065 |
| Esp3I | CGTCTC | 1 cut(s) | 1206 |
| FaeI | CATG | 2 cut(s) | 259, 377 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 321, 353, 630, 662, 1224, 1256 |
| FatI | CATG | 2 cut(s) | 255, 373 |
| FauNDI | CATATG | 1 cut(s) | 193 |
| FbaI | TGATCA | 2 cut(s) | 1402, 1608 |
| FblI | GTMKAC | 1 cut(s) | 198 |
| Fnu4HI | GCNGC | 3 cut(s) | 189, 1709, 1871 |
| FriOI | GRGCYC | 1 cut(s) | 1065 |
| Fsp4HI | GCNGC | 3 cut(s) | 189, 1709, 1871 |
| FspBI | CTAG | 3 cut(s) | 1505, 1643, 1718 |
| FspI | TGCGCA | 1 cut(s) | 726 |
| GlaI | GCGC | 3 cut(s) | 264, 726, 822 |
| GluI | GCNGC | 3 cut(s) | 189, 1709, 1871 |
| GsuI | CTGGAG | 1 cut(s) | 130 |
| HaeII | RGCGCY | 1 cut(s) | 266 |
| HhaI | GCGC | 3 cut(s) | 265, 727, 823 |
| Hin1II | CATG | 2 cut(s) | 259, 377 |
| Hin6I | GCGC | 3 cut(s) | 263, 725, 821 |
| HinP1I | GCGC | 3 cut(s) | 263, 725, 821 |
| HincII | GTYRAC | 1 cut(s) | 1885 |
| HindII | GTYRAC | 1 cut(s) | 1885 |
| HindIII | AAGCTT | 3 cut(s) | 845, 1187, 1313 |
| HinfI | GANTC | 5 cut(s) | 11, 404, 545, 856, 982 |
| HphI | GGTGA | 3 cut(s) | 17, 461, 1678 |
| Hpy166II | GTNNAC | 2 cut(s) | 199, 1885 |
| Hpy188I | TCNGA | 5 cut(s) | 369, 439, 550, 1075, 1407 |
| Hpy8I | GTNNAC | 2 cut(s) | 199, 1885 |
| HpyAV | CCTTC | 4 cut(s) | 253, 535, 1078, 1280 |
| HpyCH4III | ACNGT | 4 cut(s) | 127, 170, 556, 631 |
| HpyCH4V | TGCA | 7 cut(s) | 191, 445, 671, 1012, 1018, 1027, 1516 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1024, 1337, 1799 |
| HpyF3I | CTNAG | 4 cut(s) | 157, 438, 456, 549 |
| Hsp92II | CATG | 2 cut(s) | 259, 377 |
| HspAI | GCGC | 3 cut(s) | 263, 725, 821 |
| Ksp22I | TGATCA | 2 cut(s) | 1402, 1608 |
| LguI | GCTCTTC | 2 cut(s) | 66, 327 |
| LmnI | GCTCC | 1 cut(s) | 357 |
| LpnPI | CCDG | 7 cut(s) | 94, 144, 170, 308, 431, 1718, 1775 |
| Lsp1109I | GCAGC | 3 cut(s) | 175, 1720, 1882 |
| LweI | GCATC | 3 cut(s) | 1108, 1444, 1927 |
| MaeI | CTAG | 3 cut(s) | 1505, 1643, 1718 |
| MaeIII | GTNAC | 3 cut(s) | 31, 121, 1756 |
| MflI | RGATCY | 9 cut(s) | 346, 517, 601, 874, 1237, 1279, 1300, 1384, 1426 |
| MhlI | GDGCHC | 1 cut(s) | 1065 |
| MluCI | AATT | 8 cut(s) | 52, 90, 151, 1132, 1398, 1697, 1859, 1950 |
| MlyI | GAGTC | 2 cut(s) | 5, 865 |
| MroXI | GAANNNNTTC | 2 cut(s) | 939, 1839 |
| MspCI | CTTAAG | 8 cut(s) | 338, 563, 605, 752, 1052, 1346, 1388, 1430 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1024, 1337, 1799 |
| NdeI | CATATG | 1 cut(s) | 193 |
| NheI | GCTAGC | 1 cut(s) | 1642 |
| NlaIII | CATG | 2 cut(s) | 259, 377 |
| NmuCI | GTSAC | 1 cut(s) | 31 |
| NsbI | TGCGCA | 1 cut(s) | 726 |
| PaeR7I | CTCGAG | 2 cut(s) | 1064, 1253 |
| PagI | TCATGA | 1 cut(s) | 255 |
| PciSI | GCTCTTC | 2 cut(s) | 66, 327 |
| PdmI | GAANNNNTTC | 2 cut(s) | 939, 1839 |
| PfeI | GAWTC | 3 cut(s) | 404, 545, 982 |
| PkrI | GCNGC | 3 cut(s) | 190, 1710, 1872 |
| PleI | GAGTC | 2 cut(s) | 5, 864 |
| PpsI | GAGTC | 2 cut(s) | 5, 864 |
| PshBI | ATTAAT | 1 cut(s) | 495 |
| Psp124BI | GAGCTC | 1 cut(s) | 1065 |
| PspXI | VCTCGAGB | 2 cut(s) | 1064, 1253 |
| PsuI | RGATCY | 9 cut(s) | 346, 517, 601, 874, 1237, 1279, 1300, 1384, 1426 |
| RsaI | GTAC | 1 cut(s) | 149 |
| RsaNI | GTAC | 1 cut(s) | 148 |
| SacI | GAGCTC | 1 cut(s) | 1065 |
| SapI | GCTCTTC | 2 cut(s) | 66, 327 |
| SatI | GCNGC | 3 cut(s) | 189, 1709, 1871 |
| SchI | GAGTC | 2 cut(s) | 5, 865 |
| SduI | GDGCHC | 1 cut(s) | 1065 |
| SfaNI | GCATC | 3 cut(s) | 1108, 1444, 1927 |
| SfcI | CTRYAG | 1 cut(s) | 98 |
| Sfr274I | CTCGAG | 2 cut(s) | 1064, 1253 |
| SlaI | CTCGAG | 2 cut(s) | 1064, 1253 |
| Sse9I | AATT | 8 cut(s) | 52, 90, 151, 1132, 1398, 1697, 1859, 1950 |
| SsiI | CCGC | 2 cut(s) | 1268, 1565 |
| SspI | AATATT | 1 cut(s) | 464 |
| SspMI | CTAG | 3 cut(s) | 1505, 1643, 1718 |
| SstI | GAGCTC | 1 cut(s) | 1065 |
| TaaI | ACNGT | 4 cut(s) | 127, 170, 556, 631 |
| TaqI | TCGA | 3 cut(s) | 105, 1065, 1254 |
| TasI | AATT | 8 cut(s) | 52, 90, 151, 1132, 1398, 1697, 1859, 1950 |
| TatI | WGTACW | 1 cut(s) | 147 |
| TfiI | GAWTC | 3 cut(s) | 404, 545, 982 |
| TscAI | CASTG | 1 cut(s) | 175 |
| TseFI | GTSAC | 1 cut(s) | 31 |
| TseI | GCWGC | 3 cut(s) | 188, 1708, 1870 |
| Tsp45I | GTSAC | 1 cut(s) | 31 |
| TspDTI | ATGAA | 8 cut(s) | 272, 554, 696, 942, 948, 1143, 1395, 1425 |
| TspGWI | ACGGA | 1 cut(s) | 1760 |
| TspRI | CASTG | 1 cut(s) | 175 |
| Vha464I | CTTAAG | 8 cut(s) | 338, 563, 605, 752, 1052, 1346, 1388, 1430 |
| VspI | ATTAAT | 1 cut(s) | 495 |
| XapI | RAATTY | 2 cut(s) | 1132, 1950 |
| XbaI | TCTAGA | 1 cut(s) | 1717 |
| XhoI | CTCGAG | 2 cut(s) | 1064, 1253 |
| XmiI | GTMKAC | 1 cut(s) | 198 |
| XmnI | GAANNNNTTC | 2 cut(s) | 939, 1839 |
| XspI | CTAG | 3 cut(s) | 1505, 1643, 1718 |