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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g06620 FvH4_7g06640 FvH4_7g06640 |
| malus_domestica | MD02G1237600.v1.1 |
| prunus_persica | Prupe.2G094400_v2.0.a1 |
| pyrus_communis | pycom02g20830 |
| rosa_chinensis | RchiOBHm_Chr1g0335321 |
| rosa_laevigata | RLG00000029379 RLG00000029388 |
| rosa_multiflora | Rmu_sc0001268.1_g000007 Rmu_sc0001790.1_g000013 Rmu_sc0003404.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00315990 Rroxscaffold_4G00316030 |
| rosa_rugosa | Rorug01G0122000 Rorug01G0122100 Rorug01G0122600 Rorug01G0122700 Rorug01G0122800 |
| rosa_samantha | Rh1AG143300 Rh1AG143600 Rh1BG112200 Rh1BG112600 Rh1CG134900 Rh1CG135200 Rh1DG148900 Rh1DG149300 |
| rosa_wichuraiana | Rw0G009190 Rw0G009240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 549 |
| Acc65I | GGTACC | 1 cut(s) | 2247 |
| AccB1I | GGYRCC | 1 cut(s) | 2247 |
| AccBSI | CCGCTC | 1 cut(s) | 1549 |
| AccI | GTMKAC | 2 cut(s) | 21, 2109 |
| AciI | CCGC | 3 cut(s) | 1085, 1549, 1661 |
| AclWI | GGATC | 2 cut(s) | 1536, 1952 |
| AcsI | RAATTY | 1 cut(s) | 949 |
| AcuI | CTGAAG | 5 cut(s) | 212, 748, 912, 1206, 1784 |
| AfaI | GTAC | 1 cut(s) | 2249 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 2077 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2132 |
| AjnI | CCWGG | 1 cut(s) | 2221 |
| Alw21I | GWGCWC | 1 cut(s) | 882 |
| Alw26I | GTCTC | 3 cut(s) | 53, 368, 2173 |
| AlwI | GGATC | 2 cut(s) | 1536, 1952 |
| Ama87I | CYCGRG | 2 cut(s) | 881, 1070 |
| ApeKI | GCWGC | 4 cut(s) | 11, 1556, 1804, 1966 |
| ApoI | RAATTY | 1 cut(s) | 949 |
| AseI | ATTAAT | 1 cut(s) | 318 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 761, 1935 |
| Asp718I | GGTACC | 1 cut(s) | 2247 |
| AspLEI | GCGC | 3 cut(s) | 88, 550, 646 |
| AsuHPI | GGTGA | 1 cut(s) | 1774 |
| AsuNHI | GCTAGC | 2 cut(s) | 1375, 1738 |
| AvaI | CYCGRG | 2 cut(s) | 881, 1070 |
| BanI | GGYRCC | 1 cut(s) | 2247 |
| BanII | GRGCYC | 1 cut(s) | 882 |
| BbsI | GAAGAC | 2 cut(s) | 120, 870 |
| Bbv12I | GWGCWC | 1 cut(s) | 882 |
| BbvI | GCAGC | 3 cut(s) | 1568, 1816, 1978 |
| BccI | CCATC | 1 cut(s) | 1774 |
| BceAI | ACGGC | 1 cut(s) | 775 |
| BciT130I | CCWGG | 1 cut(s) | 2223 |
| BclI | TGATCA | 1 cut(s) | 1219 |
| BcoDI | GTCTC | 3 cut(s) | 53, 368, 2173 |
| BfaI | CTAG | 4 cut(s) | 1322, 1376, 1739, 2036 |
| BfmI | CTRYAG | 1 cut(s) | 1554 |
| BfoI | RGCGCY | 1 cut(s) | 89 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1154 |
| BglII | AGATCT | 9 cut(s) | 169, 340, 424, 697, 1054, 1096, 1117, 1201, 1243 |
| BisI | GCNGC | 4 cut(s) | 12, 1557, 1805, 1967 |
| BlsI | GCNGC | 4 cut(s) | 13, 1558, 1806, 1968 |
| Bme1390I | CCNGG | 1 cut(s) | 2223 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2132 |
| BmeT110I | CYCGRG | 2 cut(s) | 881, 1070 |
| BmiI | GGNNCC | 2 cut(s) | 2082, 2249 |
| BmrFI | CCNGG | 1 cut(s) | 2223 |
| BmsI | GCATC | 4 cut(s) | 925, 1261, 1420, 2171 |
| BmtI | GCTAGC | 2 cut(s) | 1379, 1742 |
| BpiI | GAAGAC | 2 cut(s) | 120, 870 |
| BsaAI | YACGTR | 1 cut(s) | 432 |
| BsaI | GGTCTC | 1 cut(s) | 53 |
| BsaJI | CCNNGG | 1 cut(s) | 2222 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 2077 |
| Bse1I | ACTGG | 3 cut(s) | 1395, 1833, 2109 |
| Bse3DI | GCAATG | 1 cut(s) | 1919 |
| BseBI | CCWGG | 1 cut(s) | 2223 |
| BseDI | CCNNGG | 1 cut(s) | 2222 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 2077 |
| BseMI | GCAATG | 1 cut(s) | 1919 |
| BseMII | CTCAG | 3 cut(s) | 252, 270, 363 |
| BseNI | ACTGG | 3 cut(s) | 1395, 1833, 2109 |
| BseRI | GAGGAG | 5 cut(s) | 647, 793, 1025, 1088, 1604 |
| BseXI | GCAGC | 3 cut(s) | 1568, 1816, 1978 |
| BshNI | GGYRCC | 1 cut(s) | 2247 |
| BsiHKAI | GWGCWC | 1 cut(s) | 882 |
| BsiHKCI | CYCGRG | 2 cut(s) | 881, 1070 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 2077 |
| BsmAI | GTCTC | 3 cut(s) | 53, 368, 2173 |
| BsmI | GAATGC | 1 cut(s) | 1614 |
| Bso31I | GGTCTC | 1 cut(s) | 53 |
| BsoBI | CYCGRG | 2 cut(s) | 881, 1070 |
| Bsp1286I | GDGCHC | 1 cut(s) | 882 |
| BspACI | CCGC | 3 cut(s) | 1085, 1549, 1661 |
| BspCNI | CTCAG | 3 cut(s) | 253, 271, 364 |
| BspHI | TCATGA | 1 cut(s) | 78 |
| BspLI | GGNNCC | 2 cut(s) | 2082, 2249 |
| BspMAI | CTGCAG | 1 cut(s) | 1558 |
| BspOI | GCTAGC | 2 cut(s) | 1379, 1742 |
| BspPI | GGATC | 2 cut(s) | 1536, 1952 |
| BspQI | GCTCTTC | 2 cut(s) | 150, 1479 |
| BspT107I | GGYRCC | 1 cut(s) | 2247 |
| BspTNI | GGTCTC | 1 cut(s) | 53 |
| BsrBI | CCGCTC | 1 cut(s) | 1549 |
| BsrDI | GCAATG | 1 cut(s) | 1919 |
| BsrI | ACTGG | 3 cut(s) | 1395, 1833, 2109 |
| BssECI | CCNNGG | 1 cut(s) | 2222 |
| Bst2UI | CCWGG | 1 cut(s) | 2223 |
| Bst4CI | ACNGT | 4 cut(s) | 379, 454, 2134, 2247 |
| Bst6I | CTCTTC | 8 cut(s) | 150, 215, 501, 534, 587, 923, 1460, 1479 |
| BstBAI | YACGTR | 1 cut(s) | 432 |
| BstC8I | GCNNGC | 6 cut(s) | 48, 52, 1377, 1740, 1887, 1910 |
| BstDEI | CTNAG | 3 cut(s) | 261, 279, 372 |
| BstH2I | RGCGCY | 1 cut(s) | 89 |
| BstHHI | GCGC | 3 cut(s) | 88, 550, 646 |
| BstMAI | GTCTC | 3 cut(s) | 53, 368, 2173 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1154, 1895, 2067 |
| BstNI | CCWGG | 1 cut(s) | 2223 |
| BstSCI | CCNGG | 1 cut(s) | 2221 |
| BstSFI | CTRYAG | 1 cut(s) | 1554 |
| BstSNI | TACGTA | 1 cut(s) | 432 |
| BstV1I | GCAGC | 3 cut(s) | 1568, 1816, 1978 |
| BstV2I | GAAGAC | 2 cut(s) | 120, 870 |
| BtsI | GCAGTG | 1 cut(s) | 275 |
| BtsIMutI | CAGTG | 1 cut(s) | 275 |
| Cac8I | GCNNGC | 6 cut(s) | 48, 52, 1377, 1740, 1887, 1910 |
| CciI | TCATGA | 1 cut(s) | 78 |
| CfoI | GCGC | 3 cut(s) | 88, 550, 646 |
| Csp6I | GTAC | 1 cut(s) | 2248 |
| CviAII | CATG | 6 cut(s) | 79, 197, 2024, 2203, 2240, 2258 |
| CviQI | GTAC | 1 cut(s) | 2248 |
| DdeI | CTNAG | 3 cut(s) | 261, 279, 372 |
| DraI | TTTAAA | 3 cut(s) | 1639, 1714, 1789 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2132 |
| Eam1104I | CTCTTC | 8 cut(s) | 150, 215, 501, 534, 587, 923, 1460, 1479 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2132 |
| EarI | CTCTTC | 8 cut(s) | 150, 215, 501, 534, 587, 923, 1460, 1479 |
| Ecl136II | GAGCTC | 1 cut(s) | 880 |
| Eco105I | TACGTA | 1 cut(s) | 432 |
| Eco24I | GRGCYC | 1 cut(s) | 882 |
| Eco31I | GGTCTC | 1 cut(s) | 53 |
| Eco53kI | GAGCTC | 1 cut(s) | 880 |
| Eco57I | CTGAAG | 5 cut(s) | 212, 748, 912, 1206, 1784 |
| Eco88I | CYCGRG | 2 cut(s) | 881, 1070 |
| EcoICRI | GAGCTC | 1 cut(s) | 880 |
| EcoRII | CCWGG | 1 cut(s) | 2221 |
| EcoT22I | ATGCAT | 1 cut(s) | 2263 |
| EcoT38I | GRGCYC | 1 cut(s) | 882 |
| FaeI | CATG | 6 cut(s) | 82, 200, 2027, 2206, 2243, 2261 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 144, 176, 453, 485, 1041, 1073 |
| FatI | CATG | 6 cut(s) | 78, 196, 2023, 2202, 2239, 2257 |
| FauNDI | CATATG | 1 cut(s) | 16 |
| FbaI | TGATCA | 1 cut(s) | 1219 |
| FblI | GTMKAC | 2 cut(s) | 21, 2109 |
| Fnu4HI | GCNGC | 4 cut(s) | 12, 1557, 1805, 1967 |
| FriOI | GRGCYC | 1 cut(s) | 882 |
| Fsp4HI | GCNGC | 4 cut(s) | 12, 1557, 1805, 1967 |
| FspBI | CTAG | 4 cut(s) | 1322, 1376, 1739, 2036 |
| FspI | TGCGCA | 1 cut(s) | 549 |
| GlaI | GCGC | 3 cut(s) | 87, 549, 645 |
| GluI | GCNGC | 4 cut(s) | 12, 1557, 1805, 1967 |
| HaeII | RGCGCY | 1 cut(s) | 89 |
| HhaI | GCGC | 3 cut(s) | 88, 550, 646 |
| Hin1II | CATG | 6 cut(s) | 82, 200, 2027, 2206, 2243, 2261 |
| Hin6I | GCGC | 3 cut(s) | 86, 548, 644 |
| HinP1I | GCGC | 3 cut(s) | 86, 548, 644 |
| HincII | GTYRAC | 1 cut(s) | 1981 |
| HindII | GTYRAC | 1 cut(s) | 1981 |
| HindIII | AAGCTT | 3 cut(s) | 668, 1004, 1130 |
| HinfI | GANTC | 5 cut(s) | 227, 368, 679, 804, 2111 |
| HphI | GGTGA | 1 cut(s) | 1774 |
| Hpy166II | GTNNAC | 3 cut(s) | 22, 1981, 2110 |
| Hpy188I | TCNGA | 5 cut(s) | 192, 262, 373, 892, 1224 |
| Hpy8I | GTNNAC | 3 cut(s) | 22, 1981, 2110 |
| HpyAV | CCTTC | 5 cut(s) | 76, 358, 895, 1097, 2164 |
| HpyCH4III | ACNGT | 4 cut(s) | 379, 454, 2134, 2247 |
| HpyCH4IV | ACGT | 1 cut(s) | 431 |
| HpyCH4V | TGCA | 8 cut(s) | 14, 268, 494, 834, 840, 1556, 1612, 2261 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1154, 1895, 2067 |
| HpyF3I | CTNAG | 3 cut(s) | 261, 279, 372 |
| HpySE526I | ACGT | 1 cut(s) | 431 |
| Hsp92II | CATG | 6 cut(s) | 82, 200, 2027, 2206, 2243, 2261 |
| HspAI | GCGC | 3 cut(s) | 86, 548, 644 |
| KpnI | GGTACC | 1 cut(s) | 2251 |
| Ksp22I | TGATCA | 1 cut(s) | 1219 |
| LguI | GCTCTTC | 2 cut(s) | 150, 1479 |
| LmnI | GCTCC | 3 cut(s) | 180, 1540, 2086 |
| LpnPI | CCDG | 8 cut(s) | 1376, 1799, 1814, 1871, 2090, 2141, 2208, 2235 |
| Lsp1109I | GCAGC | 3 cut(s) | 1568, 1816, 1978 |
| LweI | GCATC | 4 cut(s) | 925, 1261, 1420, 2171 |
| MaeI | CTAG | 4 cut(s) | 1322, 1376, 1739, 2036 |
| MaeII | ACGT | 1 cut(s) | 431 |
| MaeIII | GTNAC | 1 cut(s) | 1852 |
| MbiI | CCGCTC | 1 cut(s) | 1549 |
| MhlI | GDGCHC | 1 cut(s) | 882 |
| MluCI | AATT | 7 cut(s) | 949, 1215, 1335, 1793, 1955, 2089, 2197 |
| MlyI | GAGTC | 2 cut(s) | 688, 2105 |
| Mph1103I | ATGCAT | 1 cut(s) | 2263 |
| MroXI | GAANNNNTTC | 2 cut(s) | 761, 1935 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2119 |
| MspA1I | CMGCKG | 1 cut(s) | 1559 |
| MspR9I | CCNGG | 1 cut(s) | 2223 |
| Mva1269I | GAATGC | 1 cut(s) | 1614 |
| MvaI | CCWGG | 1 cut(s) | 2223 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1154, 1895, 2067 |
| NdeI | CATATG | 1 cut(s) | 16 |
| NheI | GCTAGC | 2 cut(s) | 1375, 1738 |
| NlaIII | CATG | 6 cut(s) | 82, 200, 2027, 2206, 2243, 2261 |
| NlaIV | GGNNCC | 2 cut(s) | 2082, 2249 |
| NsbI | TGCGCA | 1 cut(s) | 549 |
| NsiI | ATGCAT | 1 cut(s) | 2263 |
| PaeR7I | CTCGAG | 2 cut(s) | 881, 1070 |
| PagI | TCATGA | 1 cut(s) | 78 |
| PciSI | GCTCTTC | 2 cut(s) | 150, 1479 |
| PctI | GAATGC | 1 cut(s) | 1614 |
| PdmI | GAANNNNTTC | 2 cut(s) | 761, 1935 |
| PfeI | GAWTC | 3 cut(s) | 227, 368, 804 |
| PkrI | GCNGC | 4 cut(s) | 13, 1558, 1806, 1968 |
| PleI | GAGTC | 2 cut(s) | 687, 2105 |
| PpsI | GAGTC | 2 cut(s) | 687, 2105 |
| Ppu21I | YACGTR | 1 cut(s) | 432 |
| PshBI | ATTAAT | 1 cut(s) | 318 |
| Psp124BI | GAGCTC | 1 cut(s) | 882 |
| Psp6I | CCWGG | 1 cut(s) | 2221 |
| PspGI | CCWGG | 1 cut(s) | 2221 |
| PspN4I | GGNNCC | 2 cut(s) | 2082, 2249 |
| PspXI | VCTCGAGB | 2 cut(s) | 881, 1070 |
| PstI | CTGCAG | 1 cut(s) | 1558 |
| PvuII | CAGCTG | 1 cut(s) | 1559 |
| RsaI | GTAC | 1 cut(s) | 2249 |
| RsaNI | GTAC | 1 cut(s) | 2248 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2119 |
| SacI | GAGCTC | 1 cut(s) | 882 |
| SapI | GCTCTTC | 2 cut(s) | 150, 1479 |
| SatI | GCNGC | 4 cut(s) | 12, 1557, 1805, 1967 |
| SchI | GAGTC | 2 cut(s) | 688, 2105 |
| ScrFI | CCNGG | 1 cut(s) | 2223 |
| SduI | GDGCHC | 1 cut(s) | 882 |
| SfaNI | GCATC | 4 cut(s) | 925, 1261, 1420, 2171 |
| SfcI | CTRYAG | 1 cut(s) | 1554 |
| Sfr274I | CTCGAG | 2 cut(s) | 881, 1070 |
| SlaI | CTCGAG | 2 cut(s) | 881, 1070 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2119 |
| SnaBI | TACGTA | 1 cut(s) | 432 |
| Sse9I | AATT | 7 cut(s) | 949, 1215, 1335, 1793, 1955, 2089, 2197 |
| SsiI | CCGC | 3 cut(s) | 1085, 1549, 1661 |
| SspI | AATATT | 3 cut(s) | 287, 1361, 1584 |
| SspMI | CTAG | 4 cut(s) | 1322, 1376, 1739, 2036 |
| SstI | GAGCTC | 1 cut(s) | 882 |
| StyD4I | CCNGG | 1 cut(s) | 2221 |
| TaaI | ACNGT | 4 cut(s) | 379, 454, 2134, 2247 |
| TaiI | ACGT | 1 cut(s) | 434 |
| TaqI | TCGA | 4 cut(s) | 800, 882, 1071, 2165 |
| TasI | AATT | 7 cut(s) | 949, 1215, 1335, 1793, 1955, 2089, 2197 |
| TfiI | GAWTC | 3 cut(s) | 227, 368, 804 |
| TscAI | CASTG | 1 cut(s) | 275 |
| TseI | GCWGC | 4 cut(s) | 11, 1556, 1804, 1966 |
| TspGWI | ACGGA | 1 cut(s) | 1856 |
| TspRI | CASTG | 1 cut(s) | 275 |
| VspI | ATTAAT | 1 cut(s) | 318 |
| XapI | RAATTY | 1 cut(s) | 949 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2219 |
| XhoI | CTCGAG | 2 cut(s) | 881, 1070 |
| XmiI | GTMKAC | 2 cut(s) | 21, 2109 |
| XmnI | GAANNNNTTC | 2 cut(s) | 761, 1935 |
| XspI | CTAG | 4 cut(s) | 1322, 1376, 1739, 2036 |
| Zsp2I | ATGCAT | 1 cut(s) | 2263 |