Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0007144

Physical Location & Seq

Genomic Coordinates Reverse (-)

22787093 .. 22791783

Gene Structure 4691 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G187000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1296 bp

ATGGCTTGTAGACGTAGTGTCTCCACCACAGTGACCTTTGGTACCAGACGTTTCCACCCTGCATTTAGTCACATTCTTCATGATAACAATGAGGATACTAAATCACATGCACCGAATTCAAGTTTGCCTCCACCTGTGATCAAGAGTACTTTGCCACGTGGCTCTTACAACTCGACACTTGGATTTTGTTTTGGTTCTCGATGTAGAGAGAGGACAGGCTCATCATTGTCTTGGAAAATGGGGCTTGGCTCCTTTCATTGTAGGTATATGTCAACCATAATTGATGATGGGTCTGATAAGATTAATGACATTGGCTATTTTGCCGAGGTTATTACGGATAAGACGGTGGAAGTGGTAACCTCCCAAGCCCCCGCTGCGAGTGAAGTGGCTGCTGCTGCAGCAGATTCTTTCTTCCCAGTTGCTGCCCTGCAGTATTTGATCGATGGCGTGCATTCTTTTACTGGATGTAATTGGTGGGCCTCAATAGCTTTAACAACTATTCTGATTCGAGGGGCTACAATTCCACTTCTCATTAATCAACTCAGGGCTACTACACAACTTAATTTAATGAGGCCCCATTTAGAGGAGTTAAAACAACAGATGCAAGATATGGCAATGGATCCGAATGTTTTGCAAGAAGGACAGAAACGAATGAAGGCATTGTTCAAGGAATATGGAGTCAATCCACTTTCTCAATTGCAACCGCTATTCATTCAAGGTCCAATCTTCATCAGTTTTTTCTTAGCTGTTAGAAACATGGCTGAGAAGGTTCCTTCTTTTCAAAGTGGTGGAGCTCTTTGGTTTACTGATCTCACTACTCCAGATAGCTTGCTCATCCTTCCAGTTCTGACATCATTGACATTCTTGATTACAGTAGAGTGCAACATGCAGGAGGGTCTTGAAGGGAATCCCATTGCCCAAACTATGAAAAACTATTCTAGAATCCTTGCAGCCATTTCAGTTCCTGTAATGATGGGTTTCCCCAAGGCACTGTTCTGTTATTGGCTCACCTCCAACCTGTTCTCCCTTACATATGGATTAGTAATTAGGCTCCCAGAGGTGAAGACTTTCCTTGGTCTTCCAGAAATCCCTATGCCACCTCCTGCTCCATCACAACCTCAATCCTTTTTGTCTTCAGCAATAGAACAGGACACTACCGTTGAATCAGGACCTCCGTTACCCACCAAGCCATCAAAGATTGCTGACAGAAGAATATCACGGACTTCAATTCTCAAGCAGAGACTTAAAAGTCTGGAAAATCAAATCAAGGAAAGAAATAAACAAAAGAAGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0016020

KEGG Pathways

Metabolic & Signaling

ko02024 ko03060 ko03070 map02024 map03060 map03070

Pfam Domains

Protein Families

60KD_IMP

Protein Analysis

432

Amino Acids

47.8

Weight (kDa)

9.09

Isoelectric Point (pI)

52.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007144)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46470
fragaria_vesca	FvH4_7g16310
malus_domestica	MD07G1148500.v1.1
prunus_persica	Prupe.2G187000_v2.0.a1
pyrus_communis	pycom07g14750
rosa_chinensis	RchiOBHm_Chr1g0359321 RchiOBHm_Chr1g0378431
rosa_laevigata	RLG00000027880
rosa_multiflora	Rmu_sc0000938.1_g000004 Rmu_sc0017222.1_g000003 Rmu_sc0041710.1_g000002
rosa_roxburghii	Rroxscaffold_4G00297100
rosa_rugosa	Rorug01G0269700 Rorug01G0269800 Rorug01G0269900 Rorug01G0270000
rosa_samantha	Rh1AG283500 Rh1BG249700 Rh1BG387900 Rh1CG267600 Rh1CG401400 Rh1DG278600 Rh1DG419000
rosa_wichuraiana	Rw1G025170 Rw1G037650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1248
Acc65I	GGTACC	1 cut(s)	41
AccB1I	GGYRCC	1 cut(s)	41
AccI	GTMKAC	1 cut(s)	10
AciI	CCGC	2 cut(s)	372, 704
AclWI	GGATC	2 cut(s)	614, 627
AcsI	RAATTY	1 cut(s)	115
AcuI	CTGAAG	1 cut(s)	1119
AcvI	CACGTG	1 cut(s)	158
AfaI	GTAC	2 cut(s)	43, 148
AfiI	CCNNNNNNNGG	1 cut(s)	583
AgsI	TTSAA	7 cut(s)	120, 667, 716, 782, 902, 1163, 1227
AhdI	GACNNNNNGTC	1 cut(s)	17
AjuI	GAANNNNNNNTTGG	2 cut(s)	977, 1009
AleI	CACNNNNGTG	1 cut(s)	29
AluBI	AGCT	4 cut(s)	488, 746, 794, 828
AluI	AGCT	4 cut(s)	488, 746, 794, 828
Alw21I	GWGCWC	1 cut(s)	796
Alw26I	GTCTC	2 cut(s)	25, 1234
AlwI	GGATC	2 cut(s)	614, 627
AlwNI	CAGNNNCTG	2 cut(s)	422, 965
AoxI	GGCC	2 cut(s)	477, 572
ApeKI	GCWGC	7 cut(s)	374, 389, 392, 395, 398, 422, 950
ApoI	RAATTY	1 cut(s)	115
AseI	ATTAAT	2 cut(s)	303, 534
Asp700I	GAANNNNTTC	1 cut(s)	1067
Asp718I	GGTACC	1 cut(s)	41
AspS9I	GGNCC	4 cut(s)	477, 573, 719, 1169
AsuHPI	GGTGA	2 cut(s)	1000, 1072
AvaII	GGWCC	2 cut(s)	719, 1169
BamHI	GGATCC	1 cut(s)	619
BanI	GGYRCC	1 cut(s)	41
BanII	GRGCYC	1 cut(s)	796
BbrPI	CACGTG	1 cut(s)	158
BbsI	GAAGAC	3 cut(s)	1070, 1070, 1125
Bbv12I	GWGCWC	1 cut(s)	796
BbvI	GCAGC	7 cut(s)	361, 376, 379, 382, 409, 410, 962
BccI	CCATC	5 cut(s)	281, 437, 967, 1117, 1198
BcgI	CGANNNNNNTGC	2 cut(s)	613, 647
BciVI	GTATCC	1 cut(s)	88
BclI	TGATCA	1 cut(s)	138
BcoDI	GTCTC	2 cut(s)	25, 1234
BfaI	CTAG	1 cut(s)	939
BfmI	CTRYAG	2 cut(s)	396, 428
BfuI	GTATCC	1 cut(s)	88
BisI	GCNGC	7 cut(s)	375, 390, 393, 396, 399, 423, 951
BlsI	GCNGC	7 cut(s)	376, 391, 394, 397, 400, 424, 952
BmcAI	AGTACT	1 cut(s)	148
Bme18I	GGWCC	2 cut(s)	719, 1169
BmeRI	GACNNNNNGTC	1 cut(s)	17
BmgT120I	GGNCC	4 cut(s)	477, 573, 719, 1169
BmiI	GGNNCC	6 cut(s)	43, 250, 575, 621, 771, 1052
BmrI	ACTGGG	1 cut(s)	410
BmsI	GCATC	1 cut(s)	591
BmuI	ACTGGG	1 cut(s)	410
BpiI	GAAGAC	3 cut(s)	1070, 1070, 1125
BpmI	CTGGAG	1 cut(s)	804
BpuEI	CTTGAG	1 cut(s)	1217
Bsa29I	ATCGAT	1 cut(s)	441
BsaAI	YACGTR	1 cut(s)	158
BsaJI	CCNNGG	3 cut(s)	324, 984, 1072
BsaXI	ACNNNNNCTCC	2 cut(s)	1007, 1037
Bsc4I	CCNNNNNNNGG	1 cut(s)	583
Bse1I	ACTGG	3 cut(s)	416, 466, 842
Bse3DI	GCAATG	2 cut(s)	621, 912
BseCI	ATCGAT	1 cut(s)	441
BseDI	CCNNGG	3 cut(s)	324, 984, 1072
BseGI	GGATG	2 cut(s)	470, 834
BseLI	CCNNNNNNNGG	1 cut(s)	583
BseMI	GCAATG	2 cut(s)	621, 912
BseMII	CTCAG	2 cut(s)	556, 753
BseNI	ACTGG	3 cut(s)	416, 466, 842
BseRI	GAGGAG	1 cut(s)	599
BseXI	GCAGC	7 cut(s)	361, 376, 379, 382, 409, 410, 962
BshFI	GGCC	2 cut(s)	479, 574
BshNI	GGYRCC	1 cut(s)	41
BshVI	ATCGAT	1 cut(s)	441
BsiHKAI	GWGCWC	1 cut(s)	796
BslI	CCNNNNNNNGG	1 cut(s)	583
BsmAI	GTCTC	2 cut(s)	25, 1234
BsmI	GAATGC	1 cut(s)	451
BsnI	GGCC	2 cut(s)	479, 574
Bsp1286I	GDGCHC	1 cut(s)	796
Bsp143I	GATC	4 cut(s)	138, 438, 619, 808
BspACI	CCGC	2 cut(s)	372, 704
BspANI	GGCC	2 cut(s)	479, 574
BspCNI	CTCAG	2 cut(s)	555, 754
BspDI	ATCGAT	1 cut(s)	441
BspHI	TCATGA	1 cut(s)	79
BspLI	GGNNCC	6 cut(s)	43, 250, 575, 621, 771, 1052
BspMAI	CTGCAG	2 cut(s)	400, 432
BspPI	GGATC	2 cut(s)	614, 627
BspT107I	GGYRCC	1 cut(s)	41
BsrDI	GCAATG	2 cut(s)	621, 912
BsrI	ACTGG	3 cut(s)	416, 466, 842
BssECI	CCNNGG	3 cut(s)	324, 984, 1072
BssMI	GATC	4 cut(s)	138, 438, 619, 808
BssT1I	CCWWGG	2 cut(s)	984, 1072
Bst4CI	ACNGT	5 cut(s)	31, 346, 874, 993, 1159
BstBAI	YACGTR	1 cut(s)	158
BstC8I	GCNNGC	2 cut(s)	449, 830
BstDEI	CTNAG	3 cut(s)	542, 742, 762
BstEII	GGTNACC	1 cut(s)	355
BstF5I	GGATG	2 cut(s)	470, 834
BstKTI	GATC	4 cut(s)	141, 441, 622, 811
BstMAI	GTCTC	2 cut(s)	25, 1234
BstMBI	GATC	4 cut(s)	138, 438, 619, 808
BstMWI	GCNNNNNNNGC	4 cut(s)	374, 395, 398, 485
BstNSI	RCATGY	2 cut(s)	110, 889
BstPI	GGTNACC	1 cut(s)	355
BstSFI	CTRYAG	2 cut(s)	396, 428
BstV1I	GCAGC	7 cut(s)	361, 376, 379, 382, 409, 410, 962
BstV2I	GAAGAC	3 cut(s)	1070, 1070, 1125
BstX2I	RGATCY	1 cut(s)	619
BstYI	RGATCY	1 cut(s)	619
Bsu15I	ATCGAT	1 cut(s)	441
BsuI	GTATCC	1 cut(s)	88
BsuRI	GGCC	2 cut(s)	479, 574
BsuTUI	ATCGAT	1 cut(s)	441
BtsCI	GGATG	2 cut(s)	470, 834
BtsIMutI	CAGTG	2 cut(s)	36, 989
Cac8I	GCNNGC	2 cut(s)	449, 830
CaiI	CAGNNNCTG	2 cut(s)	422, 965
CciI	TCATGA	1 cut(s)	79
Cfr13I	GGNCC	4 cut(s)	477, 573, 719, 1169
ClaI	ATCGAT	1 cut(s)	441
Csp6I	GTAC	2 cut(s)	42, 147
CviAII	CATG	4 cut(s)	80, 107, 757, 886
CviQI	GTAC	2 cut(s)	42, 147
DdeI	CTNAG	3 cut(s)	542, 742, 762
DpnI	GATC	4 cut(s)	140, 440, 621, 810
DpnII	GATC	4 cut(s)	138, 438, 619, 808
DrdI	GACNNNNNNGTC	1 cut(s)	1248
DriI	GACNNNNNGTC	1 cut(s)	17
DseDI	GACNNNNNNGTC	1 cut(s)	1248
Eam1105I	GACNNNNNGTC	1 cut(s)	17
Ecl136II	GAGCTC	1 cut(s)	794
Eco130I	CCWWGG	2 cut(s)	984, 1072
Eco24I	GRGCYC	1 cut(s)	796
Eco47I	GGWCC	2 cut(s)	719, 1169
Eco53kI	GAGCTC	1 cut(s)	794
Eco57I	CTGAAG	1 cut(s)	1119
Eco72I	CACGTG	1 cut(s)	158
Eco91I	GGTNACC	1 cut(s)	355
EcoICRI	GAGCTC	1 cut(s)	794
EcoO109I	RGGNCCY	2 cut(s)	573, 1169
EcoO65I	GGTNACC	1 cut(s)	355
EcoRI	GAATTC	1 cut(s)	115
EcoT14I	CCWWGG	2 cut(s)	984, 1072
EcoT38I	GRGCYC	1 cut(s)	796
ErhI	CCWWGG	2 cut(s)	984, 1072
FaeI	CATG	4 cut(s)	83, 110, 760, 889
FatI	CATG	4 cut(s)	79, 106, 756, 885
FauI	CCCGC	1 cut(s)	379
FauNDI	CATATG	1 cut(s)	1033
FbaI	TGATCA	1 cut(s)	138
FblI	GTMKAC	1 cut(s)	10
Fnu4HI	GCNGC	7 cut(s)	375, 390, 393, 396, 399, 423, 951
FokI	GGATG	2 cut(s)	477, 821
FriOI	GRGCYC	1 cut(s)	796
Fsp4HI	GCNGC	7 cut(s)	375, 390, 393, 396, 399, 423, 951
FspBI	CTAG	1 cut(s)	939
GluI	GCNGC	7 cut(s)	375, 390, 393, 396, 399, 423, 951
GsuI	CTGGAG	1 cut(s)	804
HaeIII	GGCC	2 cut(s)	479, 574
Hin1II	CATG	4 cut(s)	83, 110, 760, 889
HincII	GTYRAC	1 cut(s)	273
HindII	GTYRAC	1 cut(s)	273
HinfI	GANTC	6 cut(s)	404, 505, 678, 907, 942, 1163
HphI	GGTGA	2 cut(s)	1000, 1072
Hpy166II	GTNNAC	3 cut(s)	11, 273, 804
Hpy188I	TCNGA	4 cut(s)	295, 504, 624, 849
Hpy8I	GTNNAC	3 cut(s)	11, 273, 804
HpyAV	CCTTC	6 cut(s)	632, 649, 760, 783, 848, 896
HpyCH4III	ACNGT	5 cut(s)	31, 346, 874, 993, 1159
HpyCH4IV	ACGT	3 cut(s)	13, 49, 157
HpyF10VI	GCNNNNNNNGC	4 cut(s)	374, 395, 398, 485
HpyF3I	CTNAG	3 cut(s)	542, 742, 762
HpySE526I	ACGT	3 cut(s)	13, 49, 157
Hsp92II	CATG	4 cut(s)	83, 110, 760, 889
KpnI	GGTACC	1 cut(s)	45
Ksp22I	TGATCA	1 cut(s)	138
Kzo9I	GATC	4 cut(s)	138, 438, 619, 808
LmnI	GCTCC	4 cut(s)	254, 791, 1056, 1111
Lsp1109I	GCAGC	7 cut(s)	361, 376, 379, 382, 409, 410, 962
LweI	GCATC	1 cut(s)	591
MaeI	CTAG	1 cut(s)	939
MaeII	ACGT	3 cut(s)	13, 49, 157
MaeIII	GTNAC	4 cut(s)	31, 68, 355, 1176
MalI	GATC	4 cut(s)	140, 440, 621, 810
MboI	GATC	4 cut(s)	138, 438, 619, 808
MboII	GAAGA	7 cut(s)	68, 403, 718, 1070, 1075, 1125, 1221
MfeI	CAATTG	1 cut(s)	695
MflI	RGATCY	1 cut(s)	619
MhlI	GDGCHC	1 cut(s)	796
MluCI	AATT	8 cut(s)	115, 279, 469, 519, 562, 695, 1044, 1227
MlyI	GAGTC	1 cut(s)	687
MmeI	TCCRAC	1 cut(s)	1038
MroXI	GAANNNNTTC	1 cut(s)	1067
MseI	TTAA	7 cut(s)	303, 491, 534, 561, 566, 590, 1245
MslI	CAYNNNNRTG	1 cut(s)	29
MspA1I	CMGCKG	1 cut(s)	374
MunI	CAATTG	1 cut(s)	695
Mva1269I	GAATGC	1 cut(s)	451
MwoI	GCNNNNNNNGC	4 cut(s)	374, 395, 398, 485
NdeI	CATATG	1 cut(s)	1033
NdeII	GATC	4 cut(s)	138, 438, 619, 808
NlaIII	CATG	4 cut(s)	83, 110, 760, 889
NlaIV	GGNNCC	6 cut(s)	43, 250, 575, 621, 771, 1052
NmeAIII	GCCGAG	1 cut(s)	349
NmuCI	GTSAC	2 cut(s)	31, 68
NspI	RCATGY	2 cut(s)	110, 889
OliI	CACNNNNGTG	1 cut(s)	29
PagI	TCATGA	1 cut(s)	79
PctI	GAATGC	1 cut(s)	451
PdmI	GAANNNNTTC	1 cut(s)	1067
PfeI	GAWTC	5 cut(s)	404, 505, 907, 942, 1163
PkrI	GCNGC	7 cut(s)	376, 391, 394, 397, 400, 424, 952
PleI	GAGTC	1 cut(s)	686
PmaCI	CACGTG	1 cut(s)	158
PmlI	CACGTG	1 cut(s)	158
PpsI	GAGTC	1 cut(s)	686
Ppu21I	YACGTR	1 cut(s)	158
PpuMI	RGGWCCY	1 cut(s)	1169
PshBI	ATTAAT	2 cut(s)	303, 534
Psp124BI	GAGCTC	1 cut(s)	796
Psp5II	RGGWCCY	1 cut(s)	1169
PspCI	CACGTG	1 cut(s)	158
PspEI	GGTNACC	1 cut(s)	355
PspN4I	GGNNCC	6 cut(s)	43, 250, 575, 621, 771, 1052
PspPI	GGNCC	4 cut(s)	477, 573, 719, 1169
PspPPI	RGGWCCY	1 cut(s)	1169
PstI	CTGCAG	2 cut(s)	400, 432
PstNI	CAGNNNCTG	2 cut(s)	422, 965
PsuI	RGATCY	1 cut(s)	619
RsaI	GTAC	2 cut(s)	43, 148
RsaNI	GTAC	2 cut(s)	42, 147
RseI	CAYNNNNRTG	1 cut(s)	29
SacI	GAGCTC	1 cut(s)	796
SaqAI	TTAA	7 cut(s)	303, 491, 534, 561, 566, 590, 1245
SatI	GCNGC	7 cut(s)	375, 390, 393, 396, 399, 423, 951
Sau3AI	GATC	4 cut(s)	138, 438, 619, 808
Sau96I	GGNCC	4 cut(s)	477, 573, 719, 1169
ScaI	AGTACT	1 cut(s)	148
SchI	GAGTC	1 cut(s)	687
SduI	GDGCHC	1 cut(s)	796
SfaNI	GCATC	1 cut(s)	591
SfcI	CTRYAG	2 cut(s)	396, 428
SinI	GGWCC	2 cut(s)	719, 1169
SmiMI	CAYNNNNRTG	1 cut(s)	29
SmlI	CTYRAG	1 cut(s)	1232
SmoI	CTYRAG	1 cut(s)	1232
Sse9I	AATT	8 cut(s)	115, 279, 469, 519, 562, 695, 1044, 1227
SsiI	CCGC	2 cut(s)	372, 704
SspMI	CTAG	1 cut(s)	939
SstI	GAGCTC	1 cut(s)	796
StyI	CCWWGG	2 cut(s)	984, 1072
TaaI	ACNGT	5 cut(s)	31, 346, 874, 993, 1159
TaiI	ACGT	3 cut(s)	16, 52, 160
TaqI	TCGA	4 cut(s)	173, 199, 441, 508
TasI	AATT	8 cut(s)	115, 279, 469, 519, 562, 695, 1044, 1227
TatI	WGTACW	1 cut(s)	146
TfiI	GAWTC	5 cut(s)	404, 505, 907, 942, 1163
Tru1I	TTAA	7 cut(s)	303, 491, 534, 561, 566, 590, 1245
Tru9I	TTAA	7 cut(s)	303, 491, 534, 561, 566, 590, 1245
TscAI	CASTG	2 cut(s)	36, 996
TseFI	GTSAC	2 cut(s)	31, 68
TseI	GCWGC	7 cut(s)	374, 389, 392, 395, 398, 422, 950
Tsp45I	GTSAC	2 cut(s)	31, 68
TspDTI	ATGAA	6 cut(s)	68, 245, 668, 700, 718, 941
TspGWI	ACGGA	3 cut(s)	350, 1164, 1234
TspRI	CASTG	2 cut(s)	36, 996
VpaK11BI	GGWCC	2 cut(s)	719, 1169
VspI	ATTAAT	2 cut(s)	303, 534
XapI	RAATTY	1 cut(s)	115
XbaI	TCTAGA	1 cut(s)	938
XceI	RCATGY	2 cut(s)	110, 889
XmiI	GTMKAC	1 cut(s)	10
XmnI	GAANNNNTTC	1 cut(s)	1067
XspI	CTAG	1 cut(s)	939
ZrmI	AGTACT	1 cut(s)	148

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.