Prupe.2G263400_v2.0.a1

Belongs to the glycosyl hydrolase 17 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
27141404 .. 27142889
1486 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G263400.1

Sequence Viewer

Length: 1020 bp
ATGGCCTGCAACGTTCAATGGCTCTGTCTCATCTTCTCCATCACGCTTTCGGTGCTACTTGGACCAAATTTTGCAGGCGCTTCTTCAATTGGAGTATGCTATGGAATGGTGGCCAACAACTTGCCACCACCAAGAGAAGTAATTGACATGTACACATCGAATCAAATCGGACGAATGAGACTCTATGATCCAAACCTAGAAGCATTCGAAGCCCTTCGCAATACTGGCATCGAAGTCCTAGTTGGAGTTAGGAATGAGGATCTTCAACAACTTGCAAACTCCTACTCTGCTGCTCAGAACTGGATAGCAACATACATAACACCTTATTCGCACCAAATCCAATTTCGATACATAGCTGTTGGCAATGAGGTCATTCCAGGAGACTCTGCCCAGTATGTCCTCCCAGCAATGAAAAACTTGCAAAATGCTTTGGGCAATAGAGGCATCAAGGTCAGCACTTCAATTGCAACATCAGTCTTGGGTGTATCTTACCCTCCCTCAGCTGGAGCCTTTTCTCAAGACACCATGGAGTACATGGTACCTATTGCTCGATACCTCAATAGCATTGGTGCACCCTTATTAGCCAATGTGTACCCTTATTTTGCCTACATTGGAGACACAATTGACATTTCACTGCCTTATGCATTGTTCGTTTCTGGGAAGGTCGTGACAGACGGTCGTCTAAGTTATGATAACCTGTTTGACTCCATGGTGGATGCATTACATGCAGCATTGGGGAAAGCAGGGGCGCCCCAAGTCCAAGTCGTGGTGTCCGAGACAGGCTGGCCCTCCCATGGGAATGGGAAGGTGACAACACCGGCCAATGCACAAATATACAATTCGAACCTAATAAGCCACGTCTTATCGTCCCGTGGAACACCAAGGCGGCCGGGGAACTCCACCGAGACTTACTTGTTTTCCATGTTTAATGAGAACATGAAGCCTGGTGCAGCAGTGGAGCAACACTGGGGTCTCTTTCATCCCAACAAGTGGCCCGTTTATCCAATCAGTTTCCTGTGA

Protein Analysis

340

Amino Acids

36.97

Weight (kDa)

6.06

Isoelectric Point (pI)

27.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 538
AccB1I GGYRCC 2 cut(s) 538, 748
AccB7I CCANNNNNTGG 2 cut(s) 766, 990
AciI CCGC 1 cut(s) 886
AclI AACGTT 1 cut(s) 12
AclWI GGATC 2 cut(s) 182, 267
AcoI YGGCCR 3 cut(s) 111, 819, 887
AcsI RAATTY 1 cut(s) 67
AcyI GRCGYC 1 cut(s) 749
AfaI GTAC 4 cut(s) 152, 533, 540, 593
AfiI CCNNNNNNNGG 5 cut(s) 503, 766, 794, 795, 990
AflIII ACRYGT 1 cut(s) 147
AgsI TTSAA 4 cut(s) 17, 87, 266, 462
AhdI GACNNNNNGTC 1 cut(s) 675
AjiI CACGTC 1 cut(s) 859
AjnI CCWGG 2 cut(s) 376, 943
AjuI GAANNNNNNNTTGG 4 cut(s) 225, 257, 327, 359
AluBI AGCT 2 cut(s) 356, 503
AluI AGCT 2 cut(s) 356, 503
Alw21I GWGCWC 1 cut(s) 574
Alw26I GTCTC 7 cut(s) 32, 172, 375, 609, 770, 899, 977
Alw44I GTGCAC 1 cut(s) 570
AlwI GGATC 2 cut(s) 182, 267
AoxI GGCC 6 cut(s) 3, 111, 785, 819, 887, 992
ApaLI GTGCAC 1 cut(s) 570
ApeKI GCWGC 3 cut(s) 290, 728, 950
ApoI RAATTY 1 cut(s) 67
Asp700I GAANNNNTTC 1 cut(s) 213
Asp718I GGTACC 1 cut(s) 538
AspLEI GCGC 2 cut(s) 80, 751
AspS9I GGNCC 3 cut(s) 62, 786, 993
AsuC2I CCSGG 1 cut(s) 891
AsuHPI GGTGA 1 cut(s) 820
AsuII TTCGAA 2 cut(s) 207, 842
AvaII GGWCC 1 cut(s) 62
BaeGI GKGCMC 1 cut(s) 574
BalI TGGCCA 1 cut(s) 113
BanI GGYRCC 2 cut(s) 538, 748
Bbv12I GWGCWC 1 cut(s) 574
BbvCI CCTCAGC 1 cut(s) 499
BbvI GCAGC 3 cut(s) 277, 740, 962
BccI CCATC 1 cut(s) 47
BciT130I CCWGG 2 cut(s) 378, 945
BcnI CCSGG 1 cut(s) 891
BcoDI GTCTC 7 cut(s) 32, 172, 375, 609, 770, 899, 977
BfaI CTAG 2 cut(s) 197, 239
BfoI RGCGCY 2 cut(s) 81, 752
BisI GCNGC 4 cut(s) 291, 729, 887, 951
BlsI GCNGC 4 cut(s) 292, 730, 888, 952
Bme1390I CCNGG 3 cut(s) 378, 891, 945
Bme18I GGWCC 1 cut(s) 62
BmeRI GACNNNNNGTC 1 cut(s) 675
BmgBI CACGTC 1 cut(s) 859
BmgT120I GGNCC 3 cut(s) 62, 786, 993
BmiI GGNNCC 3 cut(s) 508, 540, 750
BmrFI CCNGG 3 cut(s) 378, 891, 945
BmrI ACTGGG 2 cut(s) 385, 976
BmsI GCATC 3 cut(s) 237, 453, 706
BmuI ACTGGG 2 cut(s) 385, 976
BoxI GACNNNNGTC 1 cut(s) 678
BpmI CTGGAG 1 cut(s) 525
Bpu10I CCTNAGC 1 cut(s) 499
Bpu14I TTCGAA 2 cut(s) 207, 842
BpuEI CTTGAG 1 cut(s) 501
BpuMI CCSGG 1 cut(s) 891
BsaHI GRCGYC 1 cut(s) 749
BsaI GGTCTC 1 cut(s) 977
BsaJI CCNNGG 6 cut(s) 525, 708, 793, 871, 881, 890
Bsc4I CCNNNNNNNGG 5 cut(s) 503, 766, 794, 795, 990
Bse118I RCCGGY 1 cut(s) 817
Bse1I ACTGG 4 cut(s) 229, 305, 391, 971
Bse3DI GCAATG 2 cut(s) 370, 414
BseBI CCWGG 2 cut(s) 378, 945
BseDI CCNNGG 6 cut(s) 525, 708, 793, 871, 881, 890
BseGI GGATG 2 cut(s) 721, 979
BseLI CCNNNNNNNGG 5 cut(s) 503, 766, 794, 795, 990
BseMI GCAATG 2 cut(s) 370, 414
BseMII CTCAG 2 cut(s) 308, 513
BseNI ACTGG 4 cut(s) 229, 305, 391, 971
BseSI GKGCMC 1 cut(s) 574
BseX3I CGGCCG 1 cut(s) 887
BseXI GCAGC 3 cut(s) 277, 740, 962
BseYI CCCAGC 1 cut(s) 403
BsgI GTGCAG 1 cut(s) 969
Bsh1285I CGRYCG 2 cut(s) 679, 890
BshFI GGCC 6 cut(s) 5, 113, 787, 821, 889, 994
BshNI GGYRCC 2 cut(s) 538, 748
BsiEI CGRYCG 2 cut(s) 679, 890
BsiHKAI GWGCWC 1 cut(s) 574
BsiSI CCGG 2 cut(s) 818, 890
BslFI GGGAC 1 cut(s) 853
BslI CCNNNNNNNGG 5 cut(s) 503, 766, 794, 795, 990
BsmAI GTCTC 7 cut(s) 32, 172, 375, 609, 770, 899, 977
BsmFI GGGAC 1 cut(s) 853
BsmI GAATGC 1 cut(s) 203
BsnI GGCC 6 cut(s) 5, 113, 787, 821, 889, 994
Bso31I GGTCTC 1 cut(s) 977
Bsp119I TTCGAA 2 cut(s) 207, 842
Bsp1286I GDGCHC 1 cut(s) 574
Bsp1407I TGTACA 1 cut(s) 150
Bsp143I GATC 2 cut(s) 187, 259
Bsp19I CCATGG 3 cut(s) 525, 708, 793
BspACI CCGC 1 cut(s) 886
BspANI GGCC 6 cut(s) 5, 113, 787, 821, 889, 994
BspCNI CTCAG 2 cut(s) 307, 512
BspLI GGNNCC 3 cut(s) 508, 540, 750
BspPI GGATC 2 cut(s) 182, 267
BspT104I TTCGAA 2 cut(s) 207, 842
BspT107I GGYRCC 2 cut(s) 538, 748
BspTNI GGTCTC 1 cut(s) 977
BsrDI GCAATG 2 cut(s) 370, 414
BsrFI RCCGGY 1 cut(s) 817
BsrGI TGTACA 1 cut(s) 150
BsrI ACTGG 4 cut(s) 229, 305, 391, 971
BssAI RCCGGY 1 cut(s) 817
BssECI CCNNGG 6 cut(s) 525, 708, 793, 871, 881, 890
BssMI GATC 2 cut(s) 187, 259
BssNI GRCGYC 1 cut(s) 749
BssT1I CCWWGG 4 cut(s) 525, 708, 793, 881
Bst2UI CCWGG 2 cut(s) 378, 945
Bst4CI ACNGT 1 cut(s) 677
BstACI GRCGYC 1 cut(s) 749
BstAPI GCANNNNNTGC 1 cut(s) 725
BstAUI TGTACA 1 cut(s) 150
BstBI TTCGAA 2 cut(s) 207, 842
BstC8I GCNNGC 3 cut(s) 7, 76, 785
BstDEI CTNAG 3 cut(s) 294, 499, 683
BstDSI CCRYGG 4 cut(s) 525, 708, 793, 871
BstF5I GGATG 2 cut(s) 721, 979
BstH2I RGCGCY 2 cut(s) 81, 752
BstHHI GCGC 2 cut(s) 80, 751
BstKTI GATC 2 cut(s) 190, 262
BstMAI GTCTC 7 cut(s) 32, 172, 375, 609, 770, 899, 977
BstMBI GATC 2 cut(s) 187, 259
BstMCI CGRYCG 2 cut(s) 679, 890
BstMWI GCNNNNNNNGC 5 cut(s) 52, 209, 225, 441, 725
BstNI CCWGG 2 cut(s) 378, 945
BstNSI RCATGY 2 cut(s) 151, 728
BstPAI GACNNNNGTC 1 cut(s) 678
BstSCI CCNGG 3 cut(s) 376, 889, 943
BstSLI GKGCMC 1 cut(s) 574
BstV1I GCAGC 3 cut(s) 277, 740, 962
BstX2I RGATCY 1 cut(s) 259
BstXI CCANNNNNNTGG 1 cut(s) 800
BstYI RGATCY 1 cut(s) 259
BstZI CGGCCG 1 cut(s) 887
BsuRI GGCC 6 cut(s) 5, 113, 787, 821, 889, 994
BtgI CCRYGG 4 cut(s) 525, 708, 793, 871
BtrI CACGTC 1 cut(s) 859
BtsCI GGATG 2 cut(s) 721, 979
BtsI GCAGTG 2 cut(s) 632, 960
BtsIMutI CAGTG 3 cut(s) 632, 960, 964
Cac8I GCNNGC 3 cut(s) 7, 76, 785
CfoI GCGC 2 cut(s) 80, 751
Cfr10I RCCGGY 1 cut(s) 817
Cfr13I GGNCC 3 cut(s) 62, 786, 993
Csp6I GTAC 4 cut(s) 151, 532, 539, 592
CviAII CATG 8 cut(s) 148, 526, 535, 709, 725, 794, 922, 937
CviQI GTAC 4 cut(s) 151, 532, 539, 592
DdeI CTNAG 3 cut(s) 294, 499, 683
DinI GGCGCC 1 cut(s) 750
DpnI GATC 2 cut(s) 189, 261
DpnII GATC 2 cut(s) 187, 259
DriI GACNNNNNGTC 1 cut(s) 675
EaeI YGGCCR 3 cut(s) 111, 819, 887
EagI CGGCCG 1 cut(s) 887
Eam1105I GACNNNNNGTC 1 cut(s) 675
EclXI CGGCCG 1 cut(s) 887
Eco130I CCWWGG 4 cut(s) 525, 708, 793, 881
Eco31I GGTCTC 1 cut(s) 977
Eco47I GGWCC 1 cut(s) 62
Eco52I CGGCCG 1 cut(s) 887
EcoRII CCWGG 2 cut(s) 376, 943
EcoT14I CCWWGG 4 cut(s) 525, 708, 793, 881
EcoT22I ATGCAT 2 cut(s) 646, 721
EgeI GGCGCC 1 cut(s) 750
EheI GGCGCC 1 cut(s) 750
ErhI CCWWGG 4 cut(s) 525, 708, 793, 881
FaeI CATG 8 cut(s) 151, 529, 538, 712, 728, 797, 925, 940
FaqI GGGAC 1 cut(s) 853
FatI CATG 8 cut(s) 147, 525, 534, 708, 724, 793, 921, 936
Fnu4HI GCNGC 4 cut(s) 291, 729, 887, 951
FokI GGATG 2 cut(s) 728, 966
Fsp4HI GCNGC 4 cut(s) 291, 729, 887, 951
FspBI CTAG 2 cut(s) 197, 239
GlaI GCGC 2 cut(s) 79, 750
GluI GCNGC 4 cut(s) 291, 729, 887, 951
GsaI CCCAGC 1 cut(s) 407
GsuI CTGGAG 1 cut(s) 525
HaeII RGCGCY 2 cut(s) 81, 752
HaeIII GGCC 6 cut(s) 5, 113, 787, 821, 889, 994
HapII CCGG 2 cut(s) 818, 890
HhaI GCGC 2 cut(s) 80, 751
Hin1I GRCGYC 1 cut(s) 749
Hin1II CATG 8 cut(s) 151, 529, 538, 712, 728, 797, 925, 940
Hin6I GCGC 2 cut(s) 78, 749
HinP1I GCGC 2 cut(s) 78, 749
HinfI GANTC 4 cut(s) 160, 180, 383, 704
HpaII CCGG 2 cut(s) 818, 890
HphI GGTGA 1 cut(s) 820
Hpy166II GTNNAC 3 cut(s) 153, 572, 592
Hpy188I TCNGA 3 cut(s) 170, 297, 775
Hpy188III TCNNGA 2 cut(s) 518, 667
Hpy8I GTNNAC 3 cut(s) 153, 572, 592
HpyAV CCTTC 3 cut(s) 224, 655, 799
HpyCH4III ACNGT 1 cut(s) 677
HpyCH4IV ACGT 2 cut(s) 12, 858
HpyF10VI GCNNNNNNNGC 5 cut(s) 52, 209, 225, 441, 725
HpyF3I CTNAG 3 cut(s) 294, 499, 683
HpySE526I ACGT 2 cut(s) 12, 858
Hsp92I GRCGYC 1 cut(s) 749
Hsp92II CATG 8 cut(s) 151, 529, 538, 712, 728, 797, 925, 940
HspAI GCGC 2 cut(s) 78, 749
KasI GGCGCC 1 cut(s) 748
KpnI GGTACC 1 cut(s) 542
Kzo9I GATC 2 cut(s) 187, 259
LmnI GCTCC 2 cut(s) 506, 958
Lsp1109I GCAGC 3 cut(s) 277, 740, 962
LweI GCATC 3 cut(s) 237, 453, 706
MaeI CTAG 2 cut(s) 197, 239
MaeII ACGT 2 cut(s) 12, 858
MaeIII GTNAC 2 cut(s) 667, 808
MalI GATC 2 cut(s) 189, 261
MboI GATC 2 cut(s) 187, 259
MboII GAAGA 3 cut(s) 25, 75, 254
MfeI CAATTG 3 cut(s) 87, 462, 621
MflI RGATCY 1 cut(s) 259
MhlI GDGCHC 1 cut(s) 574
MlsI TGGCCA 1 cut(s) 113
MluCI AATT 7 cut(s) 67, 87, 141, 341, 462, 621, 838
MluNI TGGCCA 1 cut(s) 113
Mly113I GGCGCC 1 cut(s) 749
MlyI GAGTC 3 cut(s) 174, 377, 698
MmeI TCCRAC 1 cut(s) 223
MnlI CCTC 8 cut(s) 250, 361, 410, 434, 504, 508, 566, 799
Mox20I TGGCCA 1 cut(s) 113
Mph1103I ATGCAT 2 cut(s) 646, 721
MroXI GAANNNNTTC 1 cut(s) 213
MscI TGGCCA 1 cut(s) 113
MseI TTAA 1 cut(s) 927
MslI CAYNNNNRTG 1 cut(s) 798
Msp20I TGGCCA 1 cut(s) 113
MspA1I CMGCKG 1 cut(s) 503
MspI CCGG 2 cut(s) 818, 890
MspR9I CCNGG 3 cut(s) 378, 891, 945
MunI CAATTG 3 cut(s) 87, 462, 621
Mva1269I GAATGC 1 cut(s) 203
MvaI CCWGG 2 cut(s) 378, 945
MwoI GCNNNNNNNGC 5 cut(s) 52, 209, 225, 441, 725
NarI GGCGCC 1 cut(s) 749
NciI CCSGG 1 cut(s) 891
NcoI CCATGG 3 cut(s) 525, 708, 793
NdeII GATC 2 cut(s) 187, 259
NlaIII CATG 8 cut(s) 151, 529, 538, 712, 728, 797, 925, 940
NlaIV GGNNCC 3 cut(s) 508, 540, 750
NmuCI GTSAC 2 cut(s) 667, 808
NsiI ATGCAT 2 cut(s) 646, 721
NspI RCATGY 2 cut(s) 151, 728
NspV TTCGAA 2 cut(s) 207, 842
PciI ACATGT 1 cut(s) 147
PcsI WCGNNNNNNNCGW 1 cut(s) 771
PctI GAATGC 1 cut(s) 203
PdmI GAANNNNTTC 1 cut(s) 213
PfeI GAWTC 1 cut(s) 160
PflMI CCANNNNNTGG 2 cut(s) 766, 990
PfoI TCCNGGA 1 cut(s) 376
PkrI GCNGC 4 cut(s) 292, 730, 888, 952
PleI GAGTC 3 cut(s) 174, 377, 698
PluTI GGCGCC 1 cut(s) 752
PpsI GAGTC 3 cut(s) 174, 377, 698
PscI ACATGT 1 cut(s) 147
PshAI GACNNNNGTC 1 cut(s) 678
Psp1406I AACGTT 1 cut(s) 12
Psp6I CCWGG 2 cut(s) 376, 943
PspFI CCCAGC 1 cut(s) 403
PspGI CCWGG 2 cut(s) 376, 943
PspN4I GGNNCC 3 cut(s) 508, 540, 750
PspPI GGNCC 3 cut(s) 62, 786, 993
PsuI RGATCY 1 cut(s) 259
PvuII CAGCTG 1 cut(s) 503
RsaI GTAC 4 cut(s) 152, 533, 540, 593
RsaNI GTAC 4 cut(s) 151, 532, 539, 592
RseI CAYNNNNRTG 1 cut(s) 798
SaqAI TTAA 1 cut(s) 927
SatI GCNGC 4 cut(s) 291, 729, 887, 951
Sau3AI GATC 2 cut(s) 187, 259
Sau96I GGNCC 3 cut(s) 62, 786, 993
SchI GAGTC 3 cut(s) 174, 377, 698
ScrFI CCNGG 3 cut(s) 378, 891, 945
SduI GDGCHC 1 cut(s) 574
SfaNI GCATC 3 cut(s) 237, 453, 706
SfoI GGCGCC 1 cut(s) 750
SfuI TTCGAA 2 cut(s) 207, 842
SinI GGWCC 1 cut(s) 62
SmiMI CAYNNNNRTG 1 cut(s) 798
SmlI CTYRAG 1 cut(s) 516
SmoI CTYRAG 1 cut(s) 516
Sse9I AATT 7 cut(s) 67, 87, 141, 341, 462, 621, 838
SsiI CCGC 1 cut(s) 886
SspDI GGCGCC 1 cut(s) 748
SspMI CTAG 2 cut(s) 197, 239
StyD4I CCNGG 3 cut(s) 376, 889, 943
StyI CCWWGG 4 cut(s) 525, 708, 793, 881
TaaI ACNGT 1 cut(s) 677
TaiI ACGT 2 cut(s) 15, 861
TaqI TCGA 6 cut(s) 158, 207, 231, 346, 550, 842
TasI AATT 7 cut(s) 67, 87, 141, 341, 462, 621, 838
TatI WGTACW 2 cut(s) 150, 531
TauI GCSGC 1 cut(s) 889
TfiI GAWTC 1 cut(s) 160
Tru1I TTAA 1 cut(s) 927
Tru9I TTAA 1 cut(s) 927
TscAI CASTG 3 cut(s) 639, 960, 971
TseFI GTSAC 2 cut(s) 667, 808
TseI GCWGC 3 cut(s) 290, 728, 950
Tsp45I GTSAC 2 cut(s) 667, 808
TspDTI ATGAA 3 cut(s) 425, 953, 968
TspRI CASTG 3 cut(s) 639, 960, 971
Van91I CCANNNNNTGG 2 cut(s) 766, 990
VneI GTGCAC 1 cut(s) 570
VpaK11BI GGWCC 1 cut(s) 62
XapI RAATTY 1 cut(s) 67
XceI RCATGY 2 cut(s) 151, 728
XcmI CCANNNNNNNNNTGG 1 cut(s) 532
XmnI GAANNNNTTC 1 cut(s) 213
XspI CTAG 2 cut(s) 197, 239
Zsp2I ATGCAT 2 cut(s) 646, 721
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.