Prupe.3G009500_v2.0.a1

Belongs to the glycosyl hydrolase 32 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
606163 .. 610062
3900 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G009500.1

Sequence Viewer

Length: 1794 bp
ATGACTTCTCCTATAAATACCCTGCATGTTGTTGCCTTATTTTGTCACTGCAAAGCCACCATGGCCATCTCCTCTCCCTTGCTATACTGCTTTCTTTCTCTATGGCTAGGACATGCTGTTCATCAGCTTGAAGCTTCCCACCAAGTTTACAGAAACCTTCCAACTTATTCCCAGTTAACTTCTTCACATCATCACCCAGTTAATGAACCTTACAGAACTGGTTATCATTTCCAGCCTCCCAAGAATTGGATCAATGATCCTAATGGACCATTGATTTACAAGGGAATTTATCATTTCTTCTATCAATACAACCCCTTAGATGTAGTTTGGGGAAACATTGTCTGGGCCCATTCCACATCAACTGATCTTGTTAACTGGACCCCACATGATGCTGCTATCTACCCATCACAGCCGTCAGACATCAACGGCTGTTGGTCGGGTTCCGCCACGATCCTCCCTGGGGGCAAACCGGTGATGTTATACACAGGAATAGACCCCCAAAATCGCCAAGTTCAGAATTTGGCCTACCCCAAGAACCTCTCAGACCCATTCCTTAGGGAGTGGGCCAAGATCCCACAAAATCCACTAATGGCACCCAGCCAAGCTAATCAAATCAATGCAAGCTCATTTAGGGACCCAACCACTGCTTGGCTAGGCCCAGATAAGAAATGGAGAGTGATCATTGGAGGCAAAACGAACCAAACAGGAGAAGCTATCCTATATAGGAGCAAAGATTTCCTTAATTGGGTTAAGGCCAAACAACCACTTCACTCAGCAGAGAAAACTGGAATGTGGGAATGCCCTGATTTTTTCCCAGTTTCAATTCATAGCCAAAATGGTCTTGACACATCAAAAATTGGTCCTGATGTTAAGCATGTGTTCAAGGTGAGCTTAGACAACACTAGGCGAGAGTACTACACAATTGGGACATATAACATCGACAAGGATATCTATATCCCGGATAAGGGCTCAGTGGAGAGTGACTCAGGCTTGAGATATGATTATGGCAAATTTTATGCTTCAAAAACTTTCTTTGACAGTTCTAAGAACCGTAGAATATTGTGGGGTTGGATTAATGAATCTTCAACTGTGGAGGATGATATCAAGAAGGGATGGTCTGGACTTCAGGCAATTCCAAGGACCCTTTGGCTTGATAAGTCTGGGAAACAATTGGTACAATGGCCAGTAGTAGAGATTGAAAAACTACGTGAAAAAGAGGTCAAGTTGCCAAGCAGTGTACTCAAGGGAGGATCAGTGCATGAAGTACTTGGTGTCACAGCAGCACAGGCAGATGTAGAGATTACTTTTGGAATAAGTGATCTTAAGAAAGCAGAAGTGCTGGACCCAAGTTGGACAAACCCACAGCTTTTGTGTAGCCGAAAGGGTGCCTCAGTTAAAGGTGGTTTAGGACCATTCGGGTTACTCGTATTGGCTTCAAAGGGCTTGAAAGAATATACATCAGTTTTCTATAGAATATTCAAAGATCACAACAAACATGTGGTGCTCCTGTGCAGTGACCAAAGCAGGTCTTCCTTAAATAAAGATAATGATAAGACCACTTATGGGGCTTTTGTAAACGTGGATCCTCTTCATGAGAAGCTCTCCCTAAGAAGCTTGATAGATCACTCTATAGTGGAGAGCTTTGGTGGAGAAGGCAAGGCGTGCATAACAGCTAGAGTTTATCCCACATTGGCCATTAATGGCGATGCCCACTTGTATGCTTTCAATTATGGAACTGAGGATGTCAAAATCACAGGAAGTGCATGGAGCTTGAAAACAGCAAAAATCAATTGA

Protein Analysis

598

Amino Acids

66.95

Weight (kDa)

8.7

Isoelectric Point (pI)

32.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1515
AccB1I GGYRCC 2 cut(s) 592, 1385
AccB7I CCANNNNNTGG 2 cut(s) 246, 648
AciI CCGC 1 cut(s) 444
AclWI GGATC 7 cut(s) 251, 257, 445, 565, 1258, 1577, 1590
AcoI YGGCCR 3 cut(s) 63, 1181, 1692
AcsI RAATTY 3 cut(s) 285, 517, 1010
AcuI CTGAAG 1 cut(s) 1109
AfaI GTAC 4 cut(s) 914, 1176, 1239, 1266
AfiI CCNNNNNNNGG 7 cut(s) 246, 460, 648, 745, 964, 965, 1563
AflII CTTAAG 1 cut(s) 1322
AflIII ACRYGT 1 cut(s) 1495
AgeI ACCGGT 1 cut(s) 469
AjnI CCWGG 1 cut(s) 457
AloI GAACNNNNNNTCC 2 cut(s) 102, 134
Alw21I GWGCWC 1 cut(s) 1506
AlwI GGATC 7 cut(s) 251, 257, 445, 565, 1258, 1577, 1590
AoxI GGCC 8 cut(s) 63, 345, 522, 564, 655, 753, 1181, 1692
ApaI GGGCCC 1 cut(s) 349
ApeKI GCWGC 2 cut(s) 392, 1280
ApoI RAATTY 3 cut(s) 285, 517, 1010
AseI ATTAAT 2 cut(s) 1074, 1698
AsiGI ACCGGT 1 cut(s) 469
AsuC2I CCSGG 1 cut(s) 959
AsuHPI GGTGA 3 cut(s) 185, 484, 898
AvaII GGWCC 7 cut(s) 266, 378, 634, 860, 1140, 1342, 1409
AxyI CCTNAGG 1 cut(s) 554
BaeGI GKGCMC 1 cut(s) 349
BalI TGGCCA 3 cut(s) 65, 1183, 1694
BamHI GGATCC 1 cut(s) 1582
BanI GGYRCC 2 cut(s) 592, 1385
BanII GRGCYC 2 cut(s) 349, 971
BbsI GAAGAC 1 cut(s) 1521
Bbv12I GWGCWC 1 cut(s) 1506
BbvI GCAGC 2 cut(s) 379, 1292
BccI CCATC 3 cut(s) 74, 412, 1107
BceAI ACGGC 2 cut(s) 397, 442
BciT130I CCWGG 1 cut(s) 459
BclI TGATCA 1 cut(s) 678
BcnI CCSGG 1 cut(s) 959
BfaI CTAG 4 cut(s) 107, 653, 903, 1674
BfmI CTRYAG 2 cut(s) 1468, 1629
BfrI CTTAAG 1 cut(s) 1322
BfuAI ACCTGC 1 cut(s) 1515
BglI GCCNNNNNGGC 1 cut(s) 62
BisI GCNGC 2 cut(s) 393, 1281
BlsI GCNGC 2 cut(s) 394, 1282
BmcAI AGTACT 2 cut(s) 914, 1266
Bme1390I CCNGG 2 cut(s) 459, 959
Bme18I GGWCC 7 cut(s) 266, 378, 634, 860, 1140, 1342, 1409
BmrFI CCNGG 2 cut(s) 459, 959
BmrI ACTGGG 3 cut(s) 166, 191, 809
BmsI GCATC 2 cut(s) 379, 1696
BmuI ACTGGG 3 cut(s) 166, 191, 809
BpiI GAAGAC 1 cut(s) 1521
BplI GAGNNNNNCTC 4 cut(s) 968, 1000, 1586, 1618
BpuEI CTTGAG 2 cut(s) 1012, 1226
BpuMI CCSGG 1 cut(s) 959
BsaAI YACGTR 1 cut(s) 1208
BsaJI CCNNGG 4 cut(s) 60, 457, 458, 1136
BsaWI WCCGGW 1 cut(s) 469
BsaXI ACNNNNNCTCC 2 cut(s) 1239, 1269
Bsc4I CCNNNNNNNGG 7 cut(s) 246, 460, 648, 745, 964, 965, 1563
Bse118I RCCGGY 1 cut(s) 469
Bse1I ACTGG 7 cut(s) 172, 197, 223, 380, 790, 815, 1184
Bse21I CCTNAGG 1 cut(s) 554
BseBI CCWGG 1 cut(s) 459
BseDI CCNNGG 4 cut(s) 60, 457, 458, 1136
BseGI GGATG 3 cut(s) 1102, 1118, 1747
BseLI CCNNNNNNNGG 7 cut(s) 246, 460, 648, 745, 964, 965, 1563
BseMII CTCAG 6 cut(s) 555, 786, 984, 999, 1404, 1728
BseNI ACTGG 7 cut(s) 172, 197, 223, 380, 790, 815, 1184
BseRI GAGGAG 1 cut(s) 61
BseSI GKGCMC 1 cut(s) 349
BseXI GCAGC 2 cut(s) 379, 1292
BseYI CCCAGC 1 cut(s) 596
BsgI GTGCAG 1 cut(s) 1531
BshFI GGCC 8 cut(s) 65, 347, 524, 566, 657, 755, 1183, 1694
BshNI GGYRCC 2 cut(s) 592, 1385
BshTI ACCGGT 1 cut(s) 469
BsiHKAI GWGCWC 1 cut(s) 1506
BsiSI CCGG 2 cut(s) 470, 959
BslFI GGGAC 2 cut(s) 647, 940
BslI CCNNNNNNNGG 7 cut(s) 246, 460, 648, 745, 964, 965, 1563
BsmFI GGGAC 2 cut(s) 647, 940
BsmI GAATGC 1 cut(s) 803
BsnI GGCC 8 cut(s) 65, 347, 524, 566, 657, 755, 1183, 1694
Bsp120I GGGCCC 1 cut(s) 345
Bsp1286I GDGCHC 3 cut(s) 349, 971, 1506
Bsp19I CCATGG 1 cut(s) 60
BspACI CCGC 1 cut(s) 444
BspANI GGCC 8 cut(s) 65, 347, 524, 566, 657, 755, 1183, 1694
BspCNI CTCAG 6 cut(s) 554, 785, 983, 998, 1403, 1729
BspHI TCATGA 1 cut(s) 1591
BspMI ACCTGC 1 cut(s) 1515
BspPI GGATC 7 cut(s) 251, 257, 445, 565, 1258, 1577, 1590
BspT107I GGYRCC 2 cut(s) 592, 1385
BspTI CTTAAG 1 cut(s) 1322
BsrFI RCCGGY 1 cut(s) 469
BsrI ACTGG 7 cut(s) 172, 197, 223, 380, 790, 815, 1184
BssAI RCCGGY 1 cut(s) 469
BssECI CCNNGG 4 cut(s) 60, 457, 458, 1136
BssT1I CCWWGG 2 cut(s) 60, 1136
Bst2UI CCWGG 1 cut(s) 459
Bst4CI ACNGT 3 cut(s) 1040, 1052, 1090
Bst6I CTCTTC 1 cut(s) 1593
BstAFI CTTAAG 1 cut(s) 1322
BstAPI GCANNNNNTGC 1 cut(s) 1662
BstBAI YACGTR 1 cut(s) 1208
BstC8I GCNNGC 2 cut(s) 622, 1663
BstDSI CCRYGG 1 cut(s) 60
BstF5I GGATG 3 cut(s) 1102, 1118, 1747
BstMWI GCNNNNNNNGC 3 cut(s) 62, 1286, 1662
BstNI CCWGG 1 cut(s) 459
BstNSI RCATGY 4 cut(s) 29, 116, 878, 1499
BstSCI CCNGG 2 cut(s) 457, 957
BstSFI CTRYAG 2 cut(s) 1468, 1629
BstSLI GKGCMC 1 cut(s) 349
BstV1I GCAGC 2 cut(s) 379, 1292
BstV2I GAAGAC 1 cut(s) 1521
BstX2I RGATCY 2 cut(s) 570, 1582
BstYI RGATCY 2 cut(s) 570, 1582
Bsu36I CCTNAGG 1 cut(s) 554
BsuRI GGCC 8 cut(s) 65, 347, 524, 566, 657, 755, 1183, 1694
BtgI CCRYGG 1 cut(s) 60
BtgZI GCGATG 1 cut(s) 1719
BtsCI GGATG 3 cut(s) 1102, 1118, 1747
BtsI GCAGTG 4 cut(s) 46, 642, 1240, 1519
BtsIMutI CAGTG 6 cut(s) 46, 642, 978, 1240, 1260, 1519
BveI ACCTGC 1 cut(s) 1515
Cac8I GCNNGC 2 cut(s) 622, 1663
CciI TCATGA 1 cut(s) 1591
Cfr10I RCCGGY 1 cut(s) 469
Csp6I GTAC 4 cut(s) 913, 1175, 1238, 1265
CspAI ACCGGT 1 cut(s) 469
CspCI CAANNNNNGTGG 2 cut(s) 1350, 1385
CviAII CATG 9 cut(s) 26, 61, 113, 386, 875, 1259, 1496, 1592, 1764
CviQI GTAC 4 cut(s) 913, 1175, 1238, 1265
EaeI YGGCCR 3 cut(s) 63, 1181, 1692
Eam1104I CTCTTC 1 cut(s) 1593
EarI CTCTTC 1 cut(s) 1593
EciI GGCGGA 1 cut(s) 433
Eco130I CCWWGG 2 cut(s) 60, 1136
Eco24I GRGCYC 2 cut(s) 349, 971
Eco32I GATATC 2 cut(s) 949, 1102
Eco47I GGWCC 7 cut(s) 266, 378, 634, 860, 1140, 1342, 1409
Eco57I CTGAAG 1 cut(s) 1109
Eco81I CCTNAGG 1 cut(s) 554
EcoO109I RGGNCCY 2 cut(s) 634, 1140
EcoRII CCWGG 1 cut(s) 457
EcoRV GATATC 2 cut(s) 949, 1102
EcoT14I CCWWGG 2 cut(s) 60, 1136
EcoT38I GRGCYC 2 cut(s) 349, 971
ErhI CCWWGG 2 cut(s) 60, 1136
FaeI CATG 9 cut(s) 29, 64, 116, 389, 878, 1262, 1499, 1595, 1767
FalI AAGNNNNNCTT 6 cut(s) 723, 755, 875, 907, 1513, 1545
FaqI GGGAC 2 cut(s) 647, 940
FatI CATG 9 cut(s) 25, 60, 112, 385, 874, 1258, 1495, 1591, 1763
FbaI TGATCA 1 cut(s) 678
Fnu4HI GCNGC 2 cut(s) 393, 1281
FokI GGATG 3 cut(s) 1109, 1125, 1754
FriOI GRGCYC 2 cut(s) 349, 971
Fsp4HI GCNGC 2 cut(s) 393, 1281
FspBI CTAG 4 cut(s) 107, 653, 903, 1674
GluI GCNGC 2 cut(s) 393, 1281
GsaI CCCAGC 1 cut(s) 600
HaeIII GGCC 8 cut(s) 65, 347, 524, 566, 657, 755, 1183, 1694
HapII CCGG 2 cut(s) 470, 959
Hin1II CATG 9 cut(s) 29, 64, 116, 389, 878, 1262, 1499, 1595, 1767
HincII GTYRAC 2 cut(s) 177, 373
HindII GTYRAC 2 cut(s) 177, 373
HindIII AAGCTT 2 cut(s) 132, 1612
HinfI GANTC 2 cut(s) 983, 1079
HpaI GTTAAC 2 cut(s) 177, 373
HpaII CCGG 2 cut(s) 470, 959
HphI GGTGA 3 cut(s) 185, 484, 898
Hpy166II GTNNAC 5 cut(s) 148, 177, 373, 1238, 1576
Hpy188I TCNGA 3 cut(s) 418, 516, 544
Hpy188III TCNNGA 5 cut(s) 842, 863, 1105, 1119, 1592
Hpy8I GTNNAC 5 cut(s) 148, 177, 373, 1238, 1576
HpyAV CCTTC 3 cut(s) 167, 1102, 1646
HpyCH4III ACNGT 3 cut(s) 1040, 1052, 1090
HpyCH4IV ACGT 2 cut(s) 1207, 1578
HpyCH4V TGCA 7 cut(s) 25, 51, 620, 1258, 1512, 1665, 1763
HpyF10VI GCNNNNNNNGC 3 cut(s) 62, 1286, 1662
HpySE526I ACGT 2 cut(s) 1207, 1578
Hsp92II CATG 9 cut(s) 29, 64, 116, 389, 878, 1262, 1499, 1595, 1767
KflI GGGWCCC 1 cut(s) 634
Ksp22I TGATCA 1 cut(s) 678
KspAI GTTAAC 2 cut(s) 177, 373
LmnI GCTCC 3 cut(s) 726, 1509, 1767
Lsp1109I GCAGC 2 cut(s) 379, 1292
LweI GCATC 2 cut(s) 379, 1696
MaeI CTAG 4 cut(s) 107, 653, 903, 1674
MaeII ACGT 2 cut(s) 1207, 1578
MaeIII GTNAC 5 cut(s) 44, 980, 1273, 1419, 1514
MboII GAAGA 5 cut(s) 174, 289, 1074, 1521, 1580
MfeI CAATTG 3 cut(s) 921, 1169, 1789
MflI RGATCY 2 cut(s) 570, 1582
MhlI GDGCHC 3 cut(s) 349, 971, 1506
MlsI TGGCCA 3 cut(s) 65, 1183, 1694
MluNI TGGCCA 3 cut(s) 65, 1183, 1694
MlyI GAGTC 1 cut(s) 977
MmeI TCCRAC 3 cut(s) 185, 1049, 1331
Mox20I TGGCCA 3 cut(s) 65, 1183, 1694
MscI TGGCCA 3 cut(s) 65, 1183, 1694
MslI CAYNNNNRTG 1 cut(s) 1716
Msp20I TGGCCA 3 cut(s) 65, 1183, 1694
MspCI CTTAAG 1 cut(s) 1322
MspI CCGG 2 cut(s) 470, 959
MspR9I CCNGG 2 cut(s) 459, 959
MunI CAATTG 3 cut(s) 921, 1169, 1789
Mva1269I GAATGC 1 cut(s) 803
MvaI CCWGG 1 cut(s) 459
MwoI GCNNNNNNNGC 3 cut(s) 62, 1286, 1662
NciI CCSGG 1 cut(s) 959
NcoI CCATGG 1 cut(s) 60
NlaIII CATG 9 cut(s) 29, 64, 116, 389, 878, 1262, 1499, 1595, 1767
NmuCI GTSAC 4 cut(s) 44, 980, 1273, 1514
NspI RCATGY 4 cut(s) 29, 116, 878, 1499
PagI TCATGA 1 cut(s) 1591
PasI CCCWGGG 1 cut(s) 458
PciI ACATGT 1 cut(s) 1495
PcsI WCGNNNNNNNCGW 1 cut(s) 1422
PctI GAATGC 1 cut(s) 803
PfeI GAWTC 1 cut(s) 1079
PflMI CCANNNNNTGG 2 cut(s) 246, 648
PfoI TCCNGGA 1 cut(s) 957
PinAI ACCGGT 1 cut(s) 469
PkrI GCNGC 2 cut(s) 394, 1282
PleI GAGTC 1 cut(s) 977
PpsI GAGTC 1 cut(s) 977
Ppu21I YACGTR 1 cut(s) 1208
PpuMI RGGWCCY 2 cut(s) 634, 1140
PscI ACATGT 1 cut(s) 1495
PshBI ATTAAT 2 cut(s) 1074, 1698
Psp5II RGGWCCY 2 cut(s) 634, 1140
Psp6I CCWGG 1 cut(s) 457
PspFI CCCAGC 1 cut(s) 596
PspGI CCWGG 1 cut(s) 457
PspOMI GGGCCC 1 cut(s) 345
PspPPI RGGWCCY 2 cut(s) 634, 1140
PsuI RGATCY 2 cut(s) 570, 1582
RsaI GTAC 4 cut(s) 914, 1176, 1239, 1266
RsaNI GTAC 4 cut(s) 913, 1175, 1238, 1265
RseI CAYNNNNRTG 1 cut(s) 1716
SatI GCNGC 2 cut(s) 393, 1281
ScaI AGTACT 2 cut(s) 914, 1266
SchI GAGTC 1 cut(s) 977
ScrFI CCNGG 2 cut(s) 459, 959
SduI GDGCHC 3 cut(s) 349, 971, 1506
SfaNI GCATC 2 cut(s) 379, 1696
SfcI CTRYAG 2 cut(s) 1468, 1629
SinI GGWCC 7 cut(s) 266, 378, 634, 860, 1140, 1342, 1409
SmiMI CAYNNNNRTG 1 cut(s) 1716
SmlI CTYRAG 3 cut(s) 991, 1241, 1322
SmoI CTYRAG 3 cut(s) 991, 1241, 1322
SsiI CCGC 1 cut(s) 444
SspI AATATT 2 cut(s) 1059, 1476
SspMI CTAG 4 cut(s) 107, 653, 903, 1674
StyD4I CCNGG 2 cut(s) 457, 957
StyI CCWWGG 2 cut(s) 60, 1136
TaaI ACNGT 3 cut(s) 1040, 1052, 1090
TaiI ACGT 2 cut(s) 1210, 1581
TaqI TCGA 1 cut(s) 939
TatI WGTACW 3 cut(s) 912, 1237, 1264
TfiI GAWTC 1 cut(s) 1079
TscAI CASTG 6 cut(s) 53, 649, 978, 1240, 1260, 1519
TseFI GTSAC 4 cut(s) 44, 980, 1273, 1514
TseI GCWGC 2 cut(s) 392, 1280
Tsp45I GTSAC 4 cut(s) 44, 980, 1273, 1514
TspDTI ATGAA 6 cut(s) 110, 219, 815, 1092, 1275, 1580
TspRI CASTG 6 cut(s) 53, 649, 978, 1240, 1260, 1519
Van91I CCANNNNNTGG 2 cut(s) 246, 648
Vha464I CTTAAG 1 cut(s) 1322
VpaK11BI GGWCC 7 cut(s) 266, 378, 634, 860, 1140, 1342, 1409
VspI ATTAAT 2 cut(s) 1074, 1698
XapI RAATTY 3 cut(s) 285, 517, 1010
XceI RCATGY 4 cut(s) 29, 116, 878, 1499
XcmI CCANNNNNNNNNTGG 3 cut(s) 645, 666, 1143
XspI CTAG 4 cut(s) 107, 653, 903, 1674
ZrmI AGTACT 2 cut(s) 914, 1266
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.