Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0001901

Physical Location & Seq

Genomic Coordinates Reverse (-)

57598466 .. 57602865

Gene Structure 4400 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG421400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGGCGATGATGATATCCACTCTTTGGCAATTCTGCCTTCTTTCACTTACGCCTTCTTATGGTGTTGTTGAGGTTCAAGCTTCCCACCATGTCCATGACAACATTCAAACTACCCAACTAAGTTCAACACAGCCCCAAGCTAAAGAGCCTTATAGAACTGGCTATCATTTCCAGCCTCCCAAGAACTGGATCAATGGGCCATTGATTTACAAGGGAATTTACCATCTTTTCTATCAATACAATCCCAAAGGTGTAGTTTGGGGCAACATTGTTTGGGCACATTCGACATCAACTGATCTTGTCAACTGGATTCCACATGAGGCTGCTATCTACCCATCACAGCCGTTTGATATCAACGGCTGCTGGTCGGGGTCCGCCACAATCCTCCCCGGAGGCAAGCCAGCCATTTTATACACCGGAATCAACCGTCAACACCAACAAGTCCAAAACTTGGCATTTCCTAAAAACCTTTCAGACCCTTTTCTTAGGGAATGGGTTAAGCTCCCACAAAACCCACTAATGGCTCCAACCCAAGCTAACCAAATCAATGCTAGTGCATTTAGAGATCCAACCACTGCTTGGCTAGGACCAGATAAGAGATGGAGGTTAATCATTGGAAGCCAAAGGGACCAAGGGGGATTAGCTATCCTCTACAGAAGCAAAGATTTCATGCATTGGACTAAGGTCAAACACCCACTTCATTCAACAAAGAAAAATGGAATGTGGGAGTGCCCCGATTTTTTCCCAGTTTCAAAGACTAGCTCAGTGGGTCTTGACACATCAACAAGTGGTCCTGATGTTAAGCATGTACTCAAGGTTAGCTTGGACAACACTAGGAAGGAGTACTACACTATTGGTACATATAACCTGAGCAGGGATATCTATATCCCAGAACAGGGATCAATTGAGAGTGATTCTGGTTTGAGGTATGATTATGGTAAATTATATGCTTCAAAAACCTTCTTTGACAGTGCTAAGAACCGGAGAGTCTTGTGGGGATGGATTAATGAATCCTCAAGTGACTTCAAGAAAGGATGGTCTGGACTCCAGGCAATTCCAAGGACCATTGTGCTTGACAAGGCTGGGAACCAATTGGTGCAATGGCCTGTCATAGAGCTTGAAGAGCTTAGAACAAAGGAGGTCAAGTTGCCGAGCACTGTGCTTAAAGGAGGATCACTTCGTGAATTACTTGGTGTCACAGCAGCACAAGCTGATGTAGAAGTCGCATTTGAGATAAGTGATTTCAGGAAAGCAGTAGTGTTGGATCCAAGTTGGAATAATCCACAGATTTTGTGTGGTAAAAAGGGTGCCTCGGTGAAAGGTAGTCTTGGACCATTTGGATTGTTCGCTTTGGCTTCAAAGGACTTGAAAGAAAAAACAGCAGTCTTCTATAGAATTTTCAAGTCCCACAACAATTACAACAAATATGTTGTGCTTATGTGCAGTGACCAAAGCAGATTGATATATCACTCTATAGTGGAGAGCTTTGGTGGAGAAGGCAAAGCGTGCATAACAGCTAGGGTTTATCCCACATTGGCTGTTGATGGTGATACCCACCTGTACGCTTTCAATTATGGAAGTGAGAGTGTCAAAATCGCAGGAAGTGCGTGGAGCTTGAAAACTGCAAAAATAAATCAAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004564 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009628 GO:0016020 GO:0016787 GO:0016798 GO:0030312 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0080167 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko00052 ko00500 ko01100 map00052 map00500 map01100

Pfam Domains

Protein Families

Glyco_hydro_32C Glyco_hydro_32N

Protein Analysis

547

Amino Acids

61.4

Weight (kDa)

9.18

Isoelectric Point (pI)

33.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_32N	PF00251	56 - 369	5.7e-99	Glycosyl hydrolases family 32 N-terminal domain
Glyco_hydro_32C	PF08244	490 - 530	4.6e-07	Glycosyl hydrolases family 32 C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001901)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13790 AT3G13790 AT3G13790 AT3G13790 AT3G13790
fragaria_vesca	FvH4_6g33590 FvH4_6g33590 FvH4_6g33590 FvH4_6g33590 FvH4_6g33602 FvH4_6g33602 FvH4_6g33602
malus_domestica	MD09G1192100.v1.1
prunus_persica	Prupe.3G009500_v2.0.a1 Prupe.3G048300_v2.0.a1 Prupe.3G048300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0143501 RchiOBHm_Chr2g0143521
rosa_laevigata	RLG00000020041 RLG00000020043
rosa_multiflora	Rmu_sc0003507.1_g000032 Rmu_sc0005083.1_g000003 Rmu_sc0005083.1_g000014 Rmu_sc0015791.1_g000002
rosa_roxburghii	Rroxscaffold_2G00101770 Rroxscaffold_2G00101800
rosa_rugosa	Rorug02G0382100 Rorug02G0382200 Rorug02G0382200 Rorug02G0382300 Rorug02G0382300 Rorug02G0382600 Rorug02G0382700 Rorug02G0382700 Rorug02G0383000 Rorug02G0383000 Rorug02G0383100
rosa_samantha	Rh2AG435000 Rh2AG435300 Rh2BG442700 Rh2BG442900 Rh2CG421000 Rh2CG421400 Rh2DG452900 Rh2DG453300
rosa_wichuraiana	Rw2G035450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1307
AccB7I	CCANNNNNTGG	4 cut(s)	24, 186, 451, 579
AciI	CCGC	1 cut(s)	375
AclWI	GGATC	6 cut(s)	197, 560, 907, 1180, 1259, 1272
AcsI	RAATTY	2 cut(s)	216, 1395
AdeI	CACNNNGTG	1 cut(s)	1181
AfaI	GTAC	4 cut(s)	810, 845, 859, 1562
AfiI	CCNNNNNNNGG	9 cut(s)	24, 59, 186, 451, 520, 579, 874, 895, 896
AjnI	CCWGG	1 cut(s)	1047
Alw21I	GWGCWC	1 cut(s)	1157
AlwI	GGATC	6 cut(s)	197, 560, 907, 1180, 1259, 1272
AoxI	GGCC	2 cut(s)	197, 1103
ApeKI	GCWGC	3 cut(s)	323, 360, 1202
ApoI	RAATTY	2 cut(s)	216, 1395
AseI	ATTAAT	1 cut(s)	1005
AspS9I	GGNCC	7 cut(s)	197, 372, 587, 628, 791, 1062, 1331
AsuC2I	CCSGG	1 cut(s)	390
AsuHPI	GGTGA	2 cut(s)	1327, 1559
AvaII	GGWCC	6 cut(s)	372, 587, 628, 791, 1062, 1331
BaeGI	GKGCMC	2 cut(s)	280, 734
BamHI	GGATCC	1 cut(s)	1264
BanI	GGYRCC	1 cut(s)	1307
BarI	GAAGNNNNNNTAC	2 cut(s)	830, 862
BbsI	GAAGAC	1 cut(s)	1378
Bbv12I	GWGCWC	1 cut(s)	1157
BbvI	GCAGC	3 cut(s)	310, 347, 1214
BccI	CCATC	6 cut(s)	231, 343, 594, 993, 1029, 1538
BceAI	ACGGC	2 cut(s)	328, 373
BcgI	CGANNNNNNTGC	2 cut(s)	1141, 1175
BciT130I	CCWGG	1 cut(s)	1049
BcnI	CCSGG	1 cut(s)	390
BfaI	CTAG	5 cut(s)	552, 584, 759, 834, 1518
BfmI	CTRYAG	3 cut(s)	652, 1390, 1473
BisI	GCNGC	3 cut(s)	324, 361, 1203
BlsI	GCNGC	3 cut(s)	325, 362, 1204
BmcAI	AGTACT	1 cut(s)	845
Bme1390I	CCNGG	2 cut(s)	390, 1049
Bme18I	GGWCC	6 cut(s)	372, 587, 628, 791, 1062, 1331
BmgT120I	GGNCC	7 cut(s)	197, 372, 587, 628, 791, 1062, 1331
BmiI	GGNNCC	6 cut(s)	373, 525, 629, 1088, 1266, 1309
BmrFI	CCNGG	2 cut(s)	390, 1049
BmrI	ACTGGG	1 cut(s)	740
BmuI	ACTGGG	1 cut(s)	740
BoxI	GACNNNNGTC	1 cut(s)	683
BpiI	GAAGAC	1 cut(s)	1378
BpmI	CTGGAG	1 cut(s)	1031
Bpu10I	CCTNAGC	1 cut(s)	869
BpuEI	CTTGAG	2 cut(s)	797, 1000
BpuMI	CCSGG	1 cut(s)	390
BsaJI	CCNNGG	4 cut(s)	388, 631, 1058, 1311
BsaWI	WCCGGW	2 cut(s)	416, 981
BsaXI	ACNNNNNCTCC	2 cut(s)	1130, 1160
Bsc4I	CCNNNNNNNGG	9 cut(s)	24, 59, 186, 451, 520, 579, 874, 895, 896
Bse1I	ACTGG	4 cut(s)	163, 191, 311, 746
Bse3DI	GCAATG	1 cut(s)	1106
BseBI	CCWGG	1 cut(s)	1049
BseDI	CCNNGG	4 cut(s)	388, 631, 1058, 1311
BseGI	GGATG	2 cut(s)	1004, 1040
BseLI	CCNNNNNNNGG	9 cut(s)	24, 59, 186, 451, 520, 579, 874, 895, 896
BseMI	GCAATG	1 cut(s)	1106
BseMII	CTCAG	2 cut(s)	777, 860
BseNI	ACTGG	4 cut(s)	163, 191, 311, 746
BseSI	GKGCMC	2 cut(s)	280, 734
BseXI	GCAGC	3 cut(s)	310, 347, 1214
BseYI	CCCAGC	1 cut(s)	1082
BsgI	GTGCAG	1 cut(s)	1462
BshFI	GGCC	2 cut(s)	199, 1105
BshNI	GGYRCC	1 cut(s)	1307
BsiHKAI	GWGCWC	1 cut(s)	1157
BsiSI	CCGG	3 cut(s)	390, 417, 982
BslFI	GGGAC	2 cut(s)	641, 1390
BslI	CCNNNNNNNGG	9 cut(s)	24, 59, 186, 451, 520, 579, 874, 895, 896
BsmFI	GGGAC	2 cut(s)	641, 1390
BsnI	GGCC	2 cut(s)	199, 1105
Bsp1286I	GDGCHC	3 cut(s)	280, 734, 1157
Bsp143I	GATC	6 cut(s)	189, 295, 565, 899, 1172, 1264
BspACI	CCGC	1 cut(s)	375
BspANI	GGCC	2 cut(s)	199, 1105
BspCNI	CTCAG	2 cut(s)	776, 861
BspLI	GGNNCC	6 cut(s)	373, 525, 629, 1088, 1266, 1309
BspPI	GGATC	6 cut(s)	197, 560, 907, 1180, 1259, 1272
BspQI	GCTCTTC	1 cut(s)	1116
BspT107I	GGYRCC	1 cut(s)	1307
BsrDI	GCAATG	1 cut(s)	1106
BsrI	ACTGG	4 cut(s)	163, 191, 311, 746
BssECI	CCNNGG	4 cut(s)	388, 631, 1058, 1311
BssMI	GATC	6 cut(s)	189, 295, 565, 899, 1172, 1264
BssT1I	CCWWGG	2 cut(s)	631, 1058
Bst2UI	CCWGG	1 cut(s)	1049
Bst4CI	ACNGT	3 cut(s)	428, 971, 1159
Bst6I	CTCTTC	1 cut(s)	1116
BstAPI	GCANNNNNTGC	2 cut(s)	1506, 1604
BstC8I	GCNNGC	3 cut(s)	398, 402, 1507
BstDEI	CTNAG	7 cut(s)	119, 485, 681, 763, 869, 975, 1127
BstF5I	GGATG	2 cut(s)	1004, 1040
BstKTI	GATC	6 cut(s)	192, 298, 568, 902, 1175, 1267
BstMBI	GATC	6 cut(s)	189, 295, 565, 899, 1172, 1264
BstMWI	GCNNNNNNNGC	4 cut(s)	1123, 1208, 1506, 1604
BstNI	CCWGG	1 cut(s)	1049
BstNSI	RCATGY	1 cut(s)	809
BstPAI	GACNNNNGTC	1 cut(s)	683
BstSCI	CCNGG	2 cut(s)	388, 1047
BstSFI	CTRYAG	3 cut(s)	652, 1390, 1473
BstSLI	GKGCMC	2 cut(s)	280, 734
BstV1I	GCAGC	3 cut(s)	310, 347, 1214
BstV2I	GAAGAC	1 cut(s)	1378
BstX2I	RGATCY	2 cut(s)	565, 1264
BstYI	RGATCY	2 cut(s)	565, 1264
BsuRI	GGCC	2 cut(s)	199, 1105
BtgZI	GCGATG	1 cut(s)	20
BtsCI	GGATG	2 cut(s)	1004, 1040
BtsI	GCAGTG	2 cut(s)	573, 1450
BtsIMutI	CAGTG	5 cut(s)	573, 771, 976, 1155, 1450
Cac8I	GCNNGC	3 cut(s)	398, 402, 1507
Cfr13I	GGNCC	7 cut(s)	197, 372, 587, 628, 791, 1062, 1331
Csp6I	GTAC	4 cut(s)	809, 844, 858, 1561
CspCI	CAANNNNNGTGG	2 cut(s)	1272, 1307
CviAII	CATG	5 cut(s)	89, 95, 317, 670, 806
CviQI	GTAC	4 cut(s)	809, 844, 858, 1561
DdeI	CTNAG	7 cut(s)	119, 485, 681, 763, 869, 975, 1127
DpnI	GATC	6 cut(s)	191, 297, 567, 901, 1174, 1266
DpnII	GATC	6 cut(s)	189, 295, 565, 899, 1172, 1264
DraIII	CACNNNGTG	1 cut(s)	1181
Eam1104I	CTCTTC	1 cut(s)	1116
EarI	CTCTTC	1 cut(s)	1116
EciI	GGCGGA	1 cut(s)	364
Eco130I	CCWWGG	2 cut(s)	631, 1058
Eco32I	GATATC	3 cut(s)	15, 352, 880
Eco47I	GGWCC	6 cut(s)	372, 587, 628, 791, 1062, 1331
EcoRII	CCWGG	1 cut(s)	1047
EcoRV	GATATC	3 cut(s)	15, 352, 880
EcoT14I	CCWWGG	2 cut(s)	631, 1058
EcoT22I	ATGCAT	1 cut(s)	675
ErhI	CCWWGG	2 cut(s)	631, 1058
FaeI	CATG	5 cut(s)	92, 98, 320, 673, 809
FalI	AAGNNNNNCTT	4 cut(s)	806, 838, 1311, 1343
FaqI	GGGAC	2 cut(s)	641, 1390
FatI	CATG	5 cut(s)	88, 94, 316, 669, 805
Fnu4HI	GCNGC	3 cut(s)	324, 361, 1203
FokI	GGATG	2 cut(s)	1011, 1047
Fsp4HI	GCNGC	3 cut(s)	324, 361, 1203
FspBI	CTAG	5 cut(s)	552, 584, 759, 834, 1518
GluI	GCNGC	3 cut(s)	324, 361, 1203
GsaI	CCCAGC	1 cut(s)	1086
GsuI	CTGGAG	1 cut(s)	1031
HaeIII	GGCC	2 cut(s)	199, 1105
HapII	CCGG	3 cut(s)	390, 417, 982
Hin1II	CATG	5 cut(s)	92, 98, 320, 673, 809
HincII	GTYRAC	2 cut(s)	304, 431
HindII	GTYRAC	2 cut(s)	304, 431
HindIII	AAGCTT	1 cut(s)	78
HinfI	GANTC	6 cut(s)	310, 420, 914, 987, 1010, 1044
HpaII	CCGG	3 cut(s)	390, 417, 982
HphI	GGTGA	2 cut(s)	1327, 1559
Hpy166II	GTNNAC	2 cut(s)	304, 431
Hpy188I	TCNGA	1 cut(s)	475
Hpy188III	TCNNGA	7 cut(s)	773, 794, 1027, 1041, 1181, 1246, 1637
Hpy8I	GTNNAC	2 cut(s)	304, 431
HpyAV	CCTTC	5 cut(s)	47, 63, 832, 970, 1490
HpyCH4III	ACNGT	3 cut(s)	428, 971, 1159
HpyCH4V	TGCA	6 cut(s)	557, 673, 1099, 1443, 1509, 1625
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1123, 1208, 1506, 1604
HpyF3I	CTNAG	7 cut(s)	119, 485, 681, 763, 869, 975, 1127
Hsp92II	CATG	5 cut(s)	92, 98, 320, 673, 809
Kzo9I	GATC	6 cut(s)	189, 295, 565, 899, 1172, 1264
LguI	GCTCTTC	1 cut(s)	1116
LmnI	GCTCC	3 cut(s)	507, 529, 1611
Lsp1109I	GCAGC	3 cut(s)	310, 347, 1214
MaeI	CTAG	5 cut(s)	552, 584, 759, 834, 1518
MaeIII	GTNAC	3 cut(s)	1019, 1195, 1445
MalI	GATC	6 cut(s)	191, 297, 567, 901, 1174, 1266
MboI	GATC	6 cut(s)	189, 295, 565, 899, 1172, 1264
MboII	GAAGA	2 cut(s)	1133, 1378
MfeI	CAATTG	2 cut(s)	903, 1091
MflI	RGATCY	2 cut(s)	565, 1264
MhlI	GDGCHC	3 cut(s)	280, 734, 1157
MlyI	GAGTC	2 cut(s)	996, 1038
MmeI	TCCRAC	4 cut(s)	551, 593, 1242, 1253
Mph1103I	ATGCAT	1 cut(s)	675
MseI	TTAA	5 cut(s)	498, 608, 801, 1005, 1164
MslI	CAYNNNNRTG	1 cut(s)	93
MspI	CCGG	3 cut(s)	390, 417, 982
MspR9I	CCNGG	2 cut(s)	390, 1049
MunI	CAATTG	2 cut(s)	903, 1091
MvaI	CCWGG	1 cut(s)	1049
MwoI	GCNNNNNNNGC	4 cut(s)	1123, 1208, 1506, 1604
NciI	CCSGG	1 cut(s)	390
NdeII	GATC	6 cut(s)	189, 295, 565, 899, 1172, 1264
NlaIII	CATG	5 cut(s)	92, 98, 320, 673, 809
NlaIV	GGNNCC	6 cut(s)	373, 525, 629, 1088, 1266, 1309
NmeAIII	GCCGAG	1 cut(s)	1176
NmuCI	GTSAC	3 cut(s)	1019, 1195, 1445
NsiI	ATGCAT	1 cut(s)	675
NspI	RCATGY	1 cut(s)	809
PciSI	GCTCTTC	1 cut(s)	1116
PfeI	GAWTC	4 cut(s)	310, 420, 914, 1010
PflMI	CCANNNNNTGG	4 cut(s)	24, 186, 451, 579
PkrI	GCNGC	3 cut(s)	325, 362, 1204
PleI	GAGTC	2 cut(s)	995, 1038
PpsI	GAGTC	2 cut(s)	995, 1038
PshAI	GACNNNNGTC	1 cut(s)	683
PshBI	ATTAAT	1 cut(s)	1005
Psp6I	CCWGG	1 cut(s)	1047
PspFI	CCCAGC	1 cut(s)	1082
PspGI	CCWGG	1 cut(s)	1047
PspN4I	GGNNCC	6 cut(s)	373, 525, 629, 1088, 1266, 1309
PspPI	GGNCC	7 cut(s)	197, 372, 587, 628, 791, 1062, 1331
PsuI	RGATCY	2 cut(s)	565, 1264
RsaI	GTAC	4 cut(s)	810, 845, 859, 1562
RsaNI	GTAC	4 cut(s)	809, 844, 858, 1561
RseI	CAYNNNNRTG	1 cut(s)	93
SapI	GCTCTTC	1 cut(s)	1116
SaqAI	TTAA	5 cut(s)	498, 608, 801, 1005, 1164
SatI	GCNGC	3 cut(s)	324, 361, 1203
Sau3AI	GATC	6 cut(s)	189, 295, 565, 899, 1172, 1264
Sau96I	GGNCC	7 cut(s)	197, 372, 587, 628, 791, 1062, 1331
ScaI	AGTACT	1 cut(s)	845
SchI	GAGTC	2 cut(s)	996, 1038
ScrFI	CCNGG	2 cut(s)	390, 1049
SduI	GDGCHC	3 cut(s)	280, 734, 1157
SfcI	CTRYAG	3 cut(s)	652, 1390, 1473
SinI	GGWCC	6 cut(s)	372, 587, 628, 791, 1062, 1331
SmiMI	CAYNNNNRTG	1 cut(s)	93
SmlI	CTYRAG	2 cut(s)	812, 1015
SmoI	CTYRAG	2 cut(s)	812, 1015
SsiI	CCGC	1 cut(s)	375
SspMI	CTAG	5 cut(s)	552, 584, 759, 834, 1518
StyD4I	CCNGG	2 cut(s)	388, 1047
StyI	CCWWGG	2 cut(s)	631, 1058
TaaI	ACNGT	3 cut(s)	428, 971, 1159
TaqI	TCGA	1 cut(s)	284
TatI	WGTACW	2 cut(s)	808, 843
TfiI	GAWTC	4 cut(s)	310, 420, 914, 1010
Tru1I	TTAA	5 cut(s)	498, 608, 801, 1005, 1164
Tru9I	TTAA	5 cut(s)	498, 608, 801, 1005, 1164
TscAI	CASTG	5 cut(s)	580, 771, 976, 1162, 1450
TseFI	GTSAC	3 cut(s)	1019, 1195, 1445
TseI	GCWGC	3 cut(s)	323, 360, 1202
Tsp45I	GTSAC	3 cut(s)	1019, 1195, 1445
TspDTI	ATGAA	3 cut(s)	658, 689, 1023
TspRI	CASTG	5 cut(s)	580, 771, 976, 1162, 1450
Van91I	CCANNNNNTGG	4 cut(s)	24, 186, 451, 579
VpaK11BI	GGWCC	6 cut(s)	372, 587, 628, 791, 1062, 1331
VspI	ATTAAT	1 cut(s)	1005
XapI	RAATTY	2 cut(s)	216, 1395
XceI	RCATGY	1 cut(s)	809
XcmI	CCANNNNNNNNNTGG	2 cut(s)	576, 597
XspI	CTAG	5 cut(s)	552, 584, 759, 834, 1518
ZrmI	AGTACT	1 cut(s)	845
Zsp2I	ATGCAT	1 cut(s)	675

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.