Rmu_sc0015791.1_g000002

Belongs to the glycosyl hydrolase 32 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0015791.1
Physical Location & Seq
Reverse (-)
4643 .. 11808
7166 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0015791.1_g000002.1.cds

Sequence Viewer

Length: 2073 bp
atgtcggcaagtgctaggcaagcgtgggcagggctctcggtagctcctcggcaagactctgcagaggctcggcaggactcgacagatgctcgacaaggctcggcagatggtcggcatgactcggcaattgctcacagatctgcagagggtaggcacagggcaggggccggtccgaattttcagacggtagtttcaggtagattctggccggttctggtggttccgccgccggttctgggctccttgaggctggagcttcaatatgtggagcgacatcgggtgccttggtttcccaaccctcacaaagccagtatggccttgatgatattctctcttcggatattcttctttctttcagttttgctttcctttggcgttattgagcttgaaggttcccaccatgcttgcagcaaccttctgaatttggaactaccttcaacatgccaagctaaagagccttacagaaccgggtatcatttccagcctcccaagaattggatcaacgatcctaatgggccattgatatacaaaaacgtgtaccatcatttttatcaatataatcctcatggtgtagcttggtcacccaatatagtttgggcccattcaacatcaaatgatcttgtcaattggattccacatgacgatgccctcaatccatcagagccgtttgatattaacggttgttggtcggggtctgctacaatcctccctggggaaaagccggccattttctacactggaatcaactccgaaaatgagcaagttcaaaacttggccttccccaaaaatctctcagacccatttctcagagaatgggttaaaatcccacaaaacccactaatgatcccaaccgaagctaaccaaataaatgcagactcatttagggacccaagtactgcttggctagggtcagataatagatggagattagtcattggaagcaagaaaaaccaaactggcctagccattctatatatgagcgaagatttcctacattggaccatggtaaaccacacctttcattcagcaaaggaaaatggaatgtgggagtgcccagattttttcccagtttcaaacagtagcccaattggtcttgacacatcaacgaatggtccggatgttaagcatgtgctcaaggttagcttgtttgatactgctaaagagtactacacaattggaacatataacctagacaaagatatatataaccctgataagggatcagtggagagtgatttgggtttgagatatgattatggtaagttttatgcatcaaaatccttctttgacagtgctaagaaccgtaggatcttgtggggttggagtaatgaatcctcaagtgccaatgatgacatcaagaagggttggtctggactccagacaattccaaggaccattttacttgatgagtctgggaaacaattggtacaatggcccatcgaagaacttgaaaagctgagaacaaagcaggttaggttgccaagaattgtgatagagggaggatcactacatgaagtacttggagtcacagcagcacaggcagatatagaagttacatttgagataagtgattttgaaaaaacagaggtgctggatccaagttggaccgatccacaaattttgtgtagcaaaaaggatgcctcagtttatgggggtctaggaccatttgggttgctggttttggcttcagagagtttgcaagaatacacagcagtcttttatagaatattcaaatctcacaacaacaaatatgtggtgctcatgtgcagtgatcaaagcaggtcttccttaaacgaaaataatgataagaccacatacggggcctttgtagatgtggatcctgttcatgagaagctatcactcagaagcttgattgatcactctatagtggagagctttggtggagaaggcaaggcgtgcataacagccagggtttatcccacattggctgttgatggttataccagcttatatactttcaattatgggaaggagggtgcaaaaatcacaggaagtgcatggagcatgaggactgcaaagattaatcgatcaagaaaagaagagaatgaatag

Protein Analysis

690

Amino Acids

77.46

Weight (kDa)

5.98

Isoelectric Point (pI)

40.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1459, 1770
AccB1I GGYRCC 1 cut(s) 280
AccB7I CCANNNNNTGG 1 cut(s) 495
AccIII TCCGGA 1 cut(s) 1114
AciI CCGC 2 cut(s) 224, 227
AcoI YGGCCR 2 cut(s) 206, 723
AcsI RAATTY 3 cut(s) 175, 421, 1617
AcuI CTGAAG 1 cut(s) 1671
AfaI GTAC 5 cut(s) 539, 895, 1166, 1428, 1518
AfiI CCNNNNNNNGG 6 cut(s) 236, 495, 712, 1216, 1217, 1818
AflIII ACRYGT 1 cut(s) 534
AjnI CCWGG 2 cut(s) 709, 1928
Alw21I GWGCWC 2 cut(s) 1134, 1761
Aor13HI TCCGGA 1 cut(s) 1114
ApaI GGGCCC 1 cut(s) 601
ApeKI GCWGC 2 cut(s) 408, 1532
ApoI RAATTY 3 cut(s) 175, 421, 1617
AseI ATTAAT 1 cut(s) 2043
AsuC2I CCSGG 1 cut(s) 469
AsuHPI GGTGA 1 cut(s) 573
AvaII GGWCC 7 cut(s) 170, 886, 999, 1112, 1392, 1605, 1661
BaeGI GKGCMC 2 cut(s) 601, 1055
BamHI GGATCC 2 cut(s) 1594, 1837
BanI GGYRCC 1 cut(s) 280
BanII GRGCYC 3 cut(s) 36, 242, 601
BarI GAAGNNNNNNTAC 2 cut(s) 975, 1007
BbsI GAAGAC 1 cut(s) 1776
Bbv12I GWGCWC 2 cut(s) 1134, 1761
BbvI GCAGC 2 cut(s) 420, 1544
BccI CCATC 6 cut(s) 101, 549, 664, 915, 1445, 1949
BceAI ACGGC 1 cut(s) 649
BcgI CGANNNNNNTGC 2 cut(s) 18, 52
BciT130I CCWGG 2 cut(s) 711, 1930
BclI TGATCA 2 cut(s) 1771, 1876
BcnI CCSGG 1 cut(s) 469
BfaI CTAG 5 cut(s) 15, 905, 962, 1190, 1658
BfmI CTRYAG 3 cut(s) 60, 141, 1884
BfuAI ACCTGC 2 cut(s) 1459, 1770
BglI GCCNNNNNGGC 1 cut(s) 314
BglII AGATCT 1 cut(s) 137
BisI GCNGC 3 cut(s) 227, 409, 1533
BlsI GCNGC 3 cut(s) 228, 410, 1534
BmcAI AGTACT 3 cut(s) 895, 1166, 1518
Bme1390I CCNGG 3 cut(s) 469, 711, 1930
Bme18I GGWCC 7 cut(s) 170, 886, 999, 1112, 1392, 1605, 1661
BmrFI CCNGG 3 cut(s) 469, 711, 1930
BmrI ACTGGG 1 cut(s) 1061
BmsI GCATC 4 cut(s) 76, 634, 1280, 1627
BmuI ACTGGG 1 cut(s) 1061
BpiI GAAGAC 1 cut(s) 1776
BpmI CTGGAG 2 cut(s) 272, 1361
BpuEI CTTGAG 3 cut(s) 265, 1118, 1321
BpuMI CCSGG 1 cut(s) 469
Bsa29I ATCGAT 1 cut(s) 2047
BsaBI GATNNNNATC 1 cut(s) 1836
BsaJI CCNNGG 7 cut(s) 47, 284, 709, 710, 1002, 1388, 1929
BsaWI WCCGGW 1 cut(s) 1114
Bsc4I CCNNNNNNNGG 6 cut(s) 236, 495, 712, 1216, 1217, 1818
Bse118I RCCGGY 4 cut(s) 167, 208, 229, 721
Bse1I ACTGG 4 cut(s) 309, 742, 961, 1067
Bse8I GATNNNNATC 1 cut(s) 1836
BseAI TCCGGA 1 cut(s) 1114
BseBI CCWGG 2 cut(s) 711, 1930
BseCI ATCGAT 1 cut(s) 2047
BseDI CCNNGG 7 cut(s) 47, 284, 709, 710, 1002, 1388, 1929
BseGI GGATG 2 cut(s) 1123, 1642
BseJI GATNNNNATC 1 cut(s) 1836
BseLI CCNNNNNNNGG 6 cut(s) 236, 495, 712, 1216, 1217, 1818
BseMII CTCAG 5 cut(s) 807, 820, 1448, 1656, 1876
BseNI ACTGG 4 cut(s) 309, 742, 961, 1067
BseRI GAGGAG 1 cut(s) 36
BseSI GKGCMC 2 cut(s) 601, 1055
BseXI GCAGC 2 cut(s) 420, 1544
BsgI GTGCAG 1 cut(s) 1786
BshNI GGYRCC 1 cut(s) 280
BshVI ATCGAT 1 cut(s) 2047
BsiHKAI GWGCWC 2 cut(s) 1134, 1761
BsiSI CCGG 6 cut(s) 168, 209, 230, 468, 722, 1115
BslFI GGGAC 1 cut(s) 899
BslI CCNNNNNNNGG 6 cut(s) 236, 495, 712, 1216, 1217, 1818
BsmFI GGGAC 1 cut(s) 899
Bsp120I GGGCCC 1 cut(s) 597
Bsp1286I GDGCHC 6 cut(s) 36, 242, 601, 1055, 1134, 1761
Bsp13I TCCGGA 1 cut(s) 1114
Bsp19I CCATGG 1 cut(s) 1002
BspACI CCGC 2 cut(s) 224, 227
BspCNI CTCAG 5 cut(s) 806, 819, 1449, 1655, 1875
BspDI ATCGAT 1 cut(s) 2047
BspEI TCCGGA 1 cut(s) 1114
BspHI TCATGA 1 cut(s) 1846
BspMAI CTGCAG 2 cut(s) 64, 145
BspMI ACCTGC 2 cut(s) 1459, 1770
BspT107I GGYRCC 1 cut(s) 280
BsrFI RCCGGY 4 cut(s) 167, 208, 229, 721
BsrI ACTGG 4 cut(s) 309, 742, 961, 1067
BssAI RCCGGY 4 cut(s) 167, 208, 229, 721
BssECI CCNNGG 7 cut(s) 47, 284, 709, 710, 1002, 1388, 1929
BssT1I CCWWGG 3 cut(s) 284, 1002, 1388
Bst2UI CCWGG 2 cut(s) 711, 1930
Bst4CI ACNGT 5 cut(s) 187, 680, 1079, 1292, 1304
Bst6I CTCTTC 2 cut(s) 339, 2055
BstAPI GCANNNNNTGC 1 cut(s) 1917
BstC8I GCNNGC 4 cut(s) 21, 406, 723, 1918
BstDEI CTNAG 6 cut(s) 793, 806, 1296, 1457, 1642, 1862
BstDSI CCRYGG 1 cut(s) 1002
BstEII GGTNACC 1 cut(s) 579
BstF5I GGATG 2 cut(s) 1123, 1642
BstMWI GCNNNNNNNGC 4 cut(s) 20, 314, 1538, 1917
BstNI CCWGG 2 cut(s) 711, 1930
BstNSI RCATGY 2 cut(s) 444, 1130
BstPI GGTNACC 1 cut(s) 579
BstSCI CCNGG 3 cut(s) 467, 709, 1928
BstSFI CTRYAG 3 cut(s) 60, 141, 1884
BstSLI GKGCMC 2 cut(s) 601, 1055
BstV1I GCAGC 2 cut(s) 420, 1544
BstV2I GAAGAC 1 cut(s) 1776
BstX2I RGATCY 4 cut(s) 137, 1308, 1594, 1837
BstYI RGATCY 4 cut(s) 137, 1308, 1594, 1837
Bsu15I ATCGAT 1 cut(s) 2047
BsuTUI ATCGAT 1 cut(s) 2047
BtgI CCRYGG 1 cut(s) 1002
BtsCI GGATG 2 cut(s) 1123, 1642
BtsI GCAGTG 1 cut(s) 1774
BtsIMutI CAGTG 4 cut(s) 735, 1230, 1297, 1774
BveI ACCTGC 2 cut(s) 1459, 1770
Cac8I GCNNGC 4 cut(s) 21, 406, 723, 1918
CciI TCATGA 1 cut(s) 1846
Cfr10I RCCGGY 4 cut(s) 167, 208, 229, 721
ClaI ATCGAT 1 cut(s) 2047
CpoI CGGWCCG 1 cut(s) 170
Csp6I GTAC 5 cut(s) 538, 894, 1165, 1427, 1517
CspCI CAANNNNNGTGG 4 cut(s) 386, 421, 1602, 1637
CspI CGGWCCG 1 cut(s) 170
CviQI GTAC 5 cut(s) 538, 894, 1165, 1427, 1517
DdeI CTNAG 6 cut(s) 793, 806, 1296, 1457, 1642, 1862
EaeI YGGCCR 2 cut(s) 206, 723
Eam1104I CTCTTC 2 cut(s) 339, 2055
EarI CTCTTC 2 cut(s) 339, 2055
EciI GGCGGA 1 cut(s) 213
Eco130I CCWWGG 3 cut(s) 284, 1002, 1388
Eco24I GRGCYC 3 cut(s) 36, 242, 601
Eco47I GGWCC 7 cut(s) 170, 886, 999, 1112, 1392, 1605, 1661
Eco57I CTGAAG 1 cut(s) 1671
Eco91I GGTNACC 1 cut(s) 579
EcoO109I RGGNCCY 2 cut(s) 886, 1821
EcoO65I GGTNACC 1 cut(s) 579
EcoRII CCWGG 2 cut(s) 709, 1928
EcoT14I CCWWGG 3 cut(s) 284, 1002, 1388
EcoT22I ATGCAT 1 cut(s) 1273
EcoT38I GRGCYC 3 cut(s) 36, 242, 601
ErhI CCWWGG 3 cut(s) 284, 1002, 1388
FalI AAGNNNNNCTT 6 cut(s) 883, 915, 1127, 1159, 1768, 1800
FaqI GGGAC 1 cut(s) 899
FbaI TGATCA 2 cut(s) 1771, 1876
Fnu4HI GCNGC 3 cut(s) 227, 409, 1533
FokI GGATG 2 cut(s) 1130, 1649
FriOI GRGCYC 3 cut(s) 36, 242, 601
Fsp4HI GCNGC 3 cut(s) 227, 409, 1533
FspBI CTAG 5 cut(s) 15, 905, 962, 1190, 1658
GluI GCNGC 3 cut(s) 227, 409, 1533
GsuI CTGGAG 2 cut(s) 272, 1361
HapII CCGG 6 cut(s) 168, 209, 230, 468, 722, 1115
HindIII AAGCTT 1 cut(s) 1867
HpaII CCGG 6 cut(s) 168, 209, 230, 468, 722, 1115
HphI GGTGA 1 cut(s) 573
Hpy166II GTNNAC 2 cut(s) 538, 1009
Hpy188III TCNNGA 7 cut(s) 1094, 1115, 1357, 1371, 1378, 1847, 2052
Hpy8I GTNNAC 2 cut(s) 538, 1009
HpyAV CCTTC 8 cut(s) 383, 425, 444, 787, 1291, 1354, 1901, 1984
HpyCH4III ACNGT 5 cut(s) 187, 680, 1079, 1292, 1304
HpyCH4IV ACGT 1 cut(s) 534
HpyF10VI GCNNNNNNNGC 4 cut(s) 20, 314, 1538, 1917
HpyF3I CTNAG 6 cut(s) 793, 806, 1296, 1457, 1642, 1862
HpySE526I ACGT 1 cut(s) 534
KflI GGGWCCC 1 cut(s) 886
Kpn2I TCCGGA 1 cut(s) 1114
KroI GCCGGC 1 cut(s) 721
KroNI GCCGGC 1 cut(s) 723
Ksp22I TGATCA 2 cut(s) 1771, 1876
LmnI GCTCC 5 cut(s) 49, 245, 253, 268, 2022
Lsp1109I GCAGC 2 cut(s) 420, 1544
LweI GCATC 4 cut(s) 76, 634, 1280, 1627
MaeI CTAG 5 cut(s) 15, 905, 962, 1190, 1658
MaeII ACGT 1 cut(s) 534
MaeIII GTNAC 3 cut(s) 579, 1525, 1552
MboII GAAGA 6 cut(s) 326, 337, 995, 1454, 1776, 2072
MfeI CAATTG 5 cut(s) 126, 625, 1086, 1173, 1421
MflI RGATCY 4 cut(s) 137, 1308, 1594, 1837
MhlI GDGCHC 6 cut(s) 36, 242, 601, 1055, 1134, 1761
MlyI GAGTC 7 cut(s) 50, 71, 113, 869, 1368, 1418, 1533
MmeI TCCRAC 2 cut(s) 1301, 1583
Mph1103I ATGCAT 1 cut(s) 1273
MroI TCCGGA 1 cut(s) 1114
MroNI GCCGGC 1 cut(s) 721
MseI TTAA 5 cut(s) 675, 819, 1122, 1790, 2043
MslI CAYNNNNRTG 1 cut(s) 642
MspI CCGG 6 cut(s) 168, 209, 230, 468, 722, 1115
MspR9I CCNGG 3 cut(s) 469, 711, 1930
MunI CAATTG 5 cut(s) 126, 625, 1086, 1173, 1421
MvaI CCWGG 2 cut(s) 711, 1930
MwoI GCNNNNNNNGC 4 cut(s) 20, 314, 1538, 1917
NaeI GCCGGC 1 cut(s) 723
NciI CCSGG 1 cut(s) 469
NcoI CCATGG 1 cut(s) 1002
NgoMIV GCCGGC 1 cut(s) 721
NmeAIII GCCGAG 4 cut(s) 28, 49, 80, 101
NmuCI GTSAC 2 cut(s) 579, 1525
NsiI ATGCAT 1 cut(s) 1273
NspI RCATGY 2 cut(s) 444, 1130
PagI TCATGA 1 cut(s) 1846
PasI CCCWGGG 1 cut(s) 710
PdiI GCCGGC 1 cut(s) 723
PfeI GAWTC 4 cut(s) 201, 631, 741, 1331
PflMI CCANNNNNTGG 1 cut(s) 495
PkrI GCNGC 3 cut(s) 228, 410, 1534
PleI GAGTC 7 cut(s) 50, 71, 113, 869, 1368, 1417, 1532
PpsI GAGTC 7 cut(s) 50, 71, 113, 869, 1368, 1417, 1532
PpuMI RGGWCCY 1 cut(s) 886
PshBI ATTAAT 1 cut(s) 2043
Psp5II RGGWCCY 1 cut(s) 886
Psp6I CCWGG 2 cut(s) 709, 1928
PspEI GGTNACC 1 cut(s) 579
PspGI CCWGG 2 cut(s) 709, 1928
PspOMI GGGCCC 1 cut(s) 597
PspPPI RGGWCCY 1 cut(s) 886
PstI CTGCAG 2 cut(s) 64, 145
PsuI RGATCY 4 cut(s) 137, 1308, 1594, 1837
RsaI GTAC 5 cut(s) 539, 895, 1166, 1428, 1518
RsaNI GTAC 5 cut(s) 538, 894, 1165, 1427, 1517
RseI CAYNNNNRTG 1 cut(s) 642
Rsr2I CGGWCCG 1 cut(s) 170
RsrII CGGWCCG 1 cut(s) 170
SaqAI TTAA 5 cut(s) 675, 819, 1122, 1790, 2043
SatI GCNGC 3 cut(s) 227, 409, 1533
ScaI AGTACT 3 cut(s) 895, 1166, 1518
SchI GAGTC 7 cut(s) 50, 71, 113, 869, 1368, 1418, 1533
ScrFI CCNGG 3 cut(s) 469, 711, 1930
SduI GDGCHC 6 cut(s) 36, 242, 601, 1055, 1134, 1761
SfaNI GCATC 4 cut(s) 76, 634, 1280, 1627
SfcI CTRYAG 3 cut(s) 60, 141, 1884
SinI GGWCC 7 cut(s) 170, 886, 999, 1112, 1392, 1605, 1661
SmiMI CAYNNNNRTG 1 cut(s) 642
SmlI CTYRAG 3 cut(s) 244, 1133, 1336
SmoI CTYRAG 3 cut(s) 244, 1133, 1336
SsiI CCGC 2 cut(s) 224, 227
SspI AATATT 1 cut(s) 1728
SspMI CTAG 5 cut(s) 15, 905, 962, 1190, 1658
StyD4I CCNGG 3 cut(s) 467, 709, 1928
StyI CCWWGG 3 cut(s) 284, 1002, 1388
TaaI ACNGT 5 cut(s) 187, 680, 1079, 1292, 1304
TaiI ACGT 1 cut(s) 537
TaqI TCGA 4 cut(s) 80, 91, 1440, 2047
TaqII GACCGA 1 cut(s) 1622
TatI WGTACW 3 cut(s) 893, 1164, 1516
TauI GCSGC 1 cut(s) 229
TfiI GAWTC 4 cut(s) 201, 631, 741, 1331
Tru1I TTAA 5 cut(s) 675, 819, 1122, 1790, 2043
Tru9I TTAA 5 cut(s) 675, 819, 1122, 1790, 2043
TscAI CASTG 4 cut(s) 742, 1230, 1297, 1774
TseFI GTSAC 2 cut(s) 579, 1525
TseI GCWGC 2 cut(s) 408, 1532
Tsp45I GTSAC 2 cut(s) 579, 1525
TspDTI ATGAA 4 cut(s) 1010, 1344, 1527, 1835
TspRI CASTG 4 cut(s) 742, 1230, 1297, 1774
Van91I CCANNNNNTGG 1 cut(s) 495
VpaK11BI GGWCC 7 cut(s) 170, 886, 999, 1112, 1392, 1605, 1661
VspI ATTAAT 1 cut(s) 2043
XapI RAATTY 3 cut(s) 175, 421, 1617
XceI RCATGY 2 cut(s) 444, 1130
XcmI CCANNNNNNNNNTGG 1 cut(s) 897
XspI CTAG 5 cut(s) 15, 905, 962, 1190, 1658
ZrmI AGTACT 3 cut(s) 895, 1166, 1518
Zsp2I ATGCAT 1 cut(s) 1273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.