Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0001901

Physical Location & Seq

Genomic Coordinates Forward (+)

64519924 .. 64589726

Gene Structure 69803 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG435000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGGCCATGATGATATCCTCTCTTTGGCAATTCTGCCTTCTTTCACTTTTGCTTTCTTATGGTGTTGTTGAGCTTCAAGCTTCCCACCATGTCTATAGGGACCTTCAAACTACCCAACTAACTTCAACACAACCCCAAGCTAAAGATCCTTACAGAACTGGTTATCATTTCCAGCCTCCCAAGAACTGGATCAATGGGCCGATGATTTACAAGGGAATTTACCATCTTTTCTACCAATACAATCCCAAAGGTGTAGTTTGGGGCAACATTGTTTGGGCACATTCAACATCAACTGATCTTGTCAACTGGATCCCACATGAAGCTGCTATCTACCCATCACAGCCGTCCGATATCAACGGCTGCTGGTCGGGGTCAGCTACAATCCTTCCCGGAGGCAAGCCGGCCATGTTATACACCGGAATCAATCCCCAAAACCAACAAGTTCAAAACTTGGCATTTCCTAAAAACCTCTCAGACCCTTTTCTTAGGGAATGGGTTAAGGTCCCTCAAAACCCACTAATGGCTCCAACACAAGCTAACCAAGTCAACGCTAGCTCATTTCGGGATCCAACCACTGCATGGCTAGGGCCAGACAAGAGATGGAGGTTAATCATTGGAAGCAAAAGGGACCAAAGGGGATTAGCTATACTCTACAGAAGCAAAGATTTCATGCATTGGACTAAGGCCAAACACCCACTACATTCAAAAGAGAAAAATGGAATGTGGGAGTGCCCAGATTTTTTCCCAATTTCAAAGACTAGCTCAGTTGGTCTTGACACATCAACAAATGGTCCTAATGTTAAGCATGTGCTCAAGGTTAGCTTGGACAACACCAGGAAAGAGTACTATACAATTGGTACATATAACATCAGCAAGGATATCTATATTCCAGATAAGGGATCAGTTGAGAGTGATTCCGGTTTGAGATATGATTATGGTAAGTTTTATGCTTCAAAAACCTTCTTTGACAGTGCTAAGAACCGCAGGATCTTGTGGGGTTGGATTAATGAATCCTCAAGTGTCAATGGTGACGTCAAGAAAGGATGGTCTGGACTCCAGGCAATTCCAAGGACCATTGTGCTTGACAAGTCTGGCAAACAATTGGTGCAATGGCCAATTGTAGAGCTTGAAAAACTTAGAACAAAGGAGGTCACGTTGCCAAGCACTGTACTTAAGGGAGGATCACTTCATGAAGTATTTGGTGTCACAGCAGCGCAAGCTGATGTAGAAGTCGCATTCGAGATAAGTGATTTCAAGAAAGCTGAAGTGTTGGATCCAAGTTGGACTAATCCACAAATTTTGTGCAGCAAAAAGGGTGCCTCGGTGAAAGGCGGTCTTGGACCATTCGGATTGTTGACTTTGGCTTCAAAGGACTTGAAGGAAAACACAGCAGTCTTCTATAGAATTTTCAAGTCTCAAAACAATTACAAGAAATATGTGGTGCTTATGTGCAGTGACCAAAGCAGGTCTTCTCTAAATCAAGATAATGATATGACCACTTATGGGGCATTTGTAAATGTGGATCCTGTTCATGAGAAGCTGTCACTAAGAAGCTTGATTGATCACTCTATAGTGGAGAGCTTTGGTGGAGAAGGCAAGGCGTGCATAACAGCTAGGGTTTATCCCACATTGGCTGTTGATGGTTATACCAACTTATATACTTTCAATTATGGGAAGGAGGGTGTAAAAATCACAGGAAGTGCATGGAGCATGAGGACTGCAAAGATTAATCGATCAAGAAAAGAAGAGAATGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004564 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009628 GO:0016020 GO:0016787 GO:0016798 GO:0030312 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0080167 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko00052 ko00500 ko01100 map00052 map00500 map01100

Pfam Domains

Protein Families

Glyco_hydro_32C Glyco_hydro_32N

Protein Analysis

585

Amino Acids

65.81

Weight (kDa)

9.26

Isoelectric Point (pI)

28.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_32N	PF00251	56 - 372	8.1e-102	Glycosyl hydrolases family 32 N-terminal domain
Glyco_hydro_32C	PF08244	375 - 560	2.5e-23	Glycosyl hydrolases family 32 C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001901)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13790 AT3G13790 AT3G13790 AT3G13790 AT3G13790
fragaria_vesca	FvH4_6g33590 FvH4_6g33590 FvH4_6g33590 FvH4_6g33590 FvH4_6g33602 FvH4_6g33602 FvH4_6g33602
malus_domestica	MD09G1192100.v1.1
prunus_persica	Prupe.3G009500_v2.0.a1 Prupe.3G048300_v2.0.a1 Prupe.3G048300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0143501 RchiOBHm_Chr2g0143521
rosa_laevigata	RLG00000020041 RLG00000020043
rosa_multiflora	Rmu_sc0003507.1_g000032 Rmu_sc0005083.1_g000003 Rmu_sc0005083.1_g000014 Rmu_sc0015791.1_g000002
rosa_roxburghii	Rroxscaffold_2G00101770 Rroxscaffold_2G00101800
rosa_rugosa	Rorug02G0382100 Rorug02G0382200 Rorug02G0382200 Rorug02G0382300 Rorug02G0382300 Rorug02G0382600 Rorug02G0382700 Rorug02G0382700 Rorug02G0383000 Rorug02G0383000 Rorug02G0383100
rosa_samantha	Rh2AG435000 Rh2AG435300 Rh2BG442700 Rh2BG442900 Rh2CG421000 Rh2CG421400 Rh2DG452900 Rh2DG453300
rosa_wichuraiana	Rw2G035450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1035
Acc36I	ACCTGC	1 cut(s)	1455
AccB1I	GGYRCC	1 cut(s)	1316
AccB7I	CCANNNNNTGG	2 cut(s)	186, 579
AciI	CCGC	2 cut(s)	982, 1332
AcoI	YGGCCR	3 cut(s)	3, 402, 1112
AcsI	RAATTY	3 cut(s)	216, 1296, 1404
AcuI	CTGAAG	1 cut(s)	1284
AcyI	GRCGYC	1 cut(s)	1032
AfaI	GTAC	3 cut(s)	845, 859, 1170
AfiI	CCNNNNNNNGG	6 cut(s)	24, 186, 520, 579, 896, 1503
AflII	CTTAAG	1 cut(s)	1172
AjnI	CCWGG	2 cut(s)	833, 1056
Alw21I	GWGCWC	1 cut(s)	813
Alw26I	GTCTC	1 cut(s)	1419
AoxI	GGCC	6 cut(s)	3, 197, 402, 587, 684, 1112
ApeKI	GCWGC	4 cut(s)	323, 360, 1211, 1305
ApoI	RAATTY	3 cut(s)	216, 1296, 1404
AseI	ATTAAT	2 cut(s)	1005, 1728
AspLEI	GCGC	1 cut(s)	1216
AspS9I	GGNCC	8 cut(s)	100, 197, 502, 587, 628, 791, 1071, 1340
AsuC2I	CCSGG	1 cut(s)	390
AsuHPI	GGTGA	2 cut(s)	1040, 1336
AsuNHI	GCTAGC	1 cut(s)	551
AvaII	GGWCC	6 cut(s)	100, 502, 628, 791, 1071, 1340
BaeGI	GKGCMC	2 cut(s)	280, 734
BalI	TGGCCA	2 cut(s)	5, 1114
BamHI	GGATCC	4 cut(s)	309, 565, 1273, 1522
BanI	GGYRCC	1 cut(s)	1316
BbsI	GAAGAC	2 cut(s)	1387, 1461
Bbv12I	GWGCWC	1 cut(s)	813
BbvI	GCAGC	4 cut(s)	310, 347, 1223, 1317
BccI	CCATC	5 cut(s)	231, 343, 594, 1038, 1634
BceAI	ACGGC	2 cut(s)	328, 373
BciT130I	CCWGG	2 cut(s)	835, 1058
BclI	TGATCA	1 cut(s)	1561
BcnI	CCSGG	1 cut(s)	390
BcoDI	GTCTC	1 cut(s)	1419
BfaI	CTAG	4 cut(s)	552, 584, 759, 1614
BfmI	CTRYAG	4 cut(s)	94, 652, 1399, 1569
BfrI	CTTAAG	1 cut(s)	1172
BfuAI	ACCTGC	1 cut(s)	1455
BisI	GCNGC	4 cut(s)	324, 361, 1212, 1306
BlsI	GCNGC	4 cut(s)	325, 362, 1213, 1307
BmcAI	AGTACT	1 cut(s)	845
Bme1390I	CCNGG	3 cut(s)	390, 835, 1058
Bme18I	GGWCC	6 cut(s)	100, 502, 628, 791, 1071, 1340
BmgT120I	GGNCC	8 cut(s)	100, 197, 502, 587, 628, 791, 1071, 1340
BmiI	GGNNCC	9 cut(s)	101, 311, 504, 525, 567, 629, 1275, 1318, 1524
BmrFI	CCNGG	3 cut(s)	390, 835, 1058
BmtI	GCTAGC	1 cut(s)	555
BpiI	GAAGAC	2 cut(s)	1387, 1461
BpmI	CTGGAG	1 cut(s)	1040
BpuEI	CTTGAG	2 cut(s)	797, 1000
BpuMI	CCSGG	1 cut(s)	390
Bsa29I	ATCGAT	1 cut(s)	1732
BsaHI	GRCGYC	1 cut(s)	1032
BsaJI	CCNNGG	2 cut(s)	1067, 1320
BsaWI	WCCGGW	2 cut(s)	416, 917
BsaXI	ACNNNNNCTCC	2 cut(s)	1139, 1169
Bsc4I	CCNNNNNNNGG	6 cut(s)	24, 186, 520, 579, 896, 1503
Bse118I	RCCGGY	1 cut(s)	400
Bse1I	ACTGG	3 cut(s)	163, 191, 311
Bse3DI	GCAATG	1 cut(s)	1115
BseBI	CCWGG	2 cut(s)	835, 1058
BseCI	ATCGAT	1 cut(s)	1732
BseDI	CCNNGG	2 cut(s)	1067, 1320
BseGI	GGATG	1 cut(s)	1049
BseLI	CCNNNNNNNGG	6 cut(s)	24, 186, 520, 579, 896, 1503
BseMI	GCAATG	1 cut(s)	1115
BseMII	CTCAG	2 cut(s)	486, 777
BseNI	ACTGG	3 cut(s)	163, 191, 311
BseSI	GKGCMC	2 cut(s)	280, 734
BseXI	GCAGC	4 cut(s)	310, 347, 1223, 1317
BsgI	GTGCAG	2 cut(s)	1324, 1471
BshFI	GGCC	6 cut(s)	5, 199, 404, 589, 686, 1114
BshNI	GGYRCC	1 cut(s)	1316
BshVI	ATCGAT	1 cut(s)	1732
BsiHKAI	GWGCWC	1 cut(s)	813
BsiSI	CCGG	4 cut(s)	390, 401, 417, 918
BslFI	GGGAC	3 cut(s)	113, 488, 641
BslI	CCNNNNNNNGG	6 cut(s)	24, 186, 520, 579, 896, 1503
BsmAI	GTCTC	1 cut(s)	1419
BsmFI	GGGAC	3 cut(s)	113, 488, 641
BsmI	GAATGC	1 cut(s)	1235
BsnI	GGCC	6 cut(s)	5, 199, 404, 589, 686, 1114
Bsp1286I	GDGCHC	3 cut(s)	280, 734, 813
BspACI	CCGC	2 cut(s)	982, 1332
BspANI	GGCC	6 cut(s)	5, 199, 404, 589, 686, 1114
BspCNI	CTCAG	2 cut(s)	485, 776
BspDI	ATCGAT	1 cut(s)	1732
BspHI	TCATGA	2 cut(s)	1189, 1531
BspLI	GGNNCC	9 cut(s)	101, 311, 504, 525, 567, 629, 1275, 1318, 1524
BspMI	ACCTGC	1 cut(s)	1455
BspOI	GCTAGC	1 cut(s)	555
BspT107I	GGYRCC	1 cut(s)	1316
BspTI	CTTAAG	1 cut(s)	1172
BsrDI	GCAATG	1 cut(s)	1115
BsrFI	RCCGGY	1 cut(s)	400
BsrI	ACTGG	3 cut(s)	163, 191, 311
BssAI	RCCGGY	1 cut(s)	400
BssECI	CCNNGG	2 cut(s)	1067, 1320
BssNI	GRCGYC	1 cut(s)	1032
BssT1I	CCWWGG	1 cut(s)	1067
Bst2UI	CCWGG	2 cut(s)	835, 1058
Bst4CI	ACNGT	2 cut(s)	971, 1168
Bst6I	CTCTTC	1 cut(s)	1740
BstACI	GRCGYC	1 cut(s)	1032
BstAFI	CTTAAG	1 cut(s)	1172
BstAPI	GCANNNNNTGC	1 cut(s)	1602
BstC8I	GCNNGC	5 cut(s)	398, 402, 553, 1218, 1603
BstDEI	CTNAG	7 cut(s)	472, 485, 681, 763, 975, 1136, 1547
BstF5I	GGATG	1 cut(s)	1049
BstHHI	GCGC	1 cut(s)	1216
BstMAI	GTCTC	1 cut(s)	1419
BstMWI	GCNNNNNNNGC	2 cut(s)	1217, 1602
BstNI	CCWGG	2 cut(s)	835, 1058
BstNSI	RCATGY	1 cut(s)	809
BstSCI	CCNGG	3 cut(s)	388, 833, 1056
BstSFI	CTRYAG	4 cut(s)	94, 652, 1399, 1569
BstSLI	GKGCMC	2 cut(s)	280, 734
BstV1I	GCAGC	4 cut(s)	310, 347, 1223, 1317
BstV2I	GAAGAC	2 cut(s)	1387, 1461
BstX2I	RGATCY	6 cut(s)	145, 309, 565, 987, 1273, 1522
BstYI	RGATCY	6 cut(s)	145, 309, 565, 987, 1273, 1522
Bsu15I	ATCGAT	1 cut(s)	1732
BsuRI	GGCC	6 cut(s)	5, 199, 404, 589, 686, 1114
BsuTUI	ATCGAT	1 cut(s)	1732
BtsCI	GGATG	1 cut(s)	1049
BtsI	GCAGTG	2 cut(s)	573, 1459
BtsIMutI	CAGTG	4 cut(s)	573, 976, 1164, 1459
BveI	ACCTGC	1 cut(s)	1455
Cac8I	GCNNGC	5 cut(s)	398, 402, 553, 1218, 1603
CciI	TCATGA	2 cut(s)	1189, 1531
CfoI	GCGC	1 cut(s)	1216
Cfr10I	RCCGGY	1 cut(s)	400
Cfr13I	GGNCC	8 cut(s)	100, 197, 502, 587, 628, 791, 1071, 1340
ClaI	ATCGAT	1 cut(s)	1732
Csp6I	GTAC	3 cut(s)	844, 858, 1169
CspCI	CAANNNNNGTGG	2 cut(s)	1281, 1316
CviQI	GTAC	3 cut(s)	844, 858, 1169
DdeI	CTNAG	7 cut(s)	472, 485, 681, 763, 975, 1136, 1547
EaeI	YGGCCR	3 cut(s)	3, 402, 1112
Eam1104I	CTCTTC	1 cut(s)	1740
EarI	CTCTTC	1 cut(s)	1740
Eco130I	CCWWGG	1 cut(s)	1067
Eco32I	GATATC	3 cut(s)	15, 352, 880
Eco47I	GGWCC	6 cut(s)	100, 502, 628, 791, 1071, 1340
Eco57I	CTGAAG	1 cut(s)	1284
EcoO109I	RGGNCCY	2 cut(s)	100, 502
EcoRII	CCWGG	2 cut(s)	833, 1056
EcoRV	GATATC	3 cut(s)	15, 352, 880
EcoT14I	CCWWGG	1 cut(s)	1067
EcoT22I	ATGCAT	1 cut(s)	675
ErhI	CCWWGG	1 cut(s)	1067
FalI	AAGNNNNNCTT	6 cut(s)	806, 838, 1320, 1352, 1453, 1485
FaqI	GGGAC	3 cut(s)	113, 488, 641
FbaI	TGATCA	1 cut(s)	1561
Fnu4HI	GCNGC	4 cut(s)	324, 361, 1212, 1306
FokI	GGATG	1 cut(s)	1056
Fsp4HI	GCNGC	4 cut(s)	324, 361, 1212, 1306
FspBI	CTAG	4 cut(s)	552, 584, 759, 1614
GlaI	GCGC	1 cut(s)	1215
GluI	GCNGC	4 cut(s)	324, 361, 1212, 1306
GsuI	CTGGAG	1 cut(s)	1040
HaeIII	GGCC	6 cut(s)	5, 199, 404, 589, 686, 1114
HapII	CCGG	4 cut(s)	390, 401, 417, 918
HhaI	GCGC	1 cut(s)	1216
Hin1I	GRCGYC	1 cut(s)	1032
Hin6I	GCGC	1 cut(s)	1214
HinP1I	GCGC	1 cut(s)	1214
HincII	GTYRAC	3 cut(s)	304, 547, 1356
HindII	GTYRAC	3 cut(s)	304, 547, 1356
HindIII	AAGCTT	2 cut(s)	78, 1552
HinfI	GANTC	4 cut(s)	420, 914, 1010, 1053
HpaII	CCGG	4 cut(s)	390, 401, 417, 918
HphI	GGTGA	2 cut(s)	1040, 1336
Hpy166II	GTNNAC	3 cut(s)	304, 547, 1356
Hpy188I	TCNGA	3 cut(s)	349, 475, 1349
Hpy8I	GTNNAC	3 cut(s)	304, 547, 1356
HpyAV	CCTTC	7 cut(s)	47, 113, 395, 970, 1372, 1586, 1669
HpyCH4III	ACNGT	2 cut(s)	971, 1168
HpyCH4IV	ACGT	2 cut(s)	1032, 1154
HpyCH4V	TGCA	8 cut(s)	578, 673, 1108, 1305, 1452, 1605, 1703, 1721
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1217, 1602
HpyF3I	CTNAG	7 cut(s)	472, 485, 681, 763, 975, 1136, 1547
HpySE526I	ACGT	2 cut(s)	1032, 1154
Hsp92I	GRCGYC	1 cut(s)	1032
HspAI	GCGC	1 cut(s)	1214
KroI	GCCGGC	1 cut(s)	400
KroNI	GCCGGC	1 cut(s)	402
Ksp22I	TGATCA	1 cut(s)	1561
LmnI	GCTCC	2 cut(s)	529, 1707
Lsp1109I	GCAGC	4 cut(s)	310, 347, 1223, 1317
MaeI	CTAG	4 cut(s)	552, 584, 759, 1614
MaeII	ACGT	2 cut(s)	1032, 1154
MaeIII	GTNAC	5 cut(s)	1028, 1150, 1204, 1454, 1542
MboII	GAAGA	3 cut(s)	1387, 1461, 1757
MfeI	CAATTG	3 cut(s)	852, 1100, 1116
MflI	RGATCY	6 cut(s)	145, 309, 565, 987, 1273, 1522
MhlI	GDGCHC	3 cut(s)	280, 734, 813
MlsI	TGGCCA	2 cut(s)	5, 1114
MluNI	TGGCCA	2 cut(s)	5, 1114
MlyI	GAGTC	1 cut(s)	1047
MmeI	TCCRAC	5 cut(s)	551, 593, 980, 1251, 1262
Mox20I	TGGCCA	2 cut(s)	5, 1114
Mph1103I	ATGCAT	1 cut(s)	675
MroNI	GCCGGC	1 cut(s)	400
MscI	TGGCCA	2 cut(s)	5, 1114
MseI	TTAA	6 cut(s)	498, 608, 801, 1005, 1173, 1728
Msp20I	TGGCCA	2 cut(s)	5, 1114
MspCI	CTTAAG	1 cut(s)	1172
MspI	CCGG	4 cut(s)	390, 401, 417, 918
MspR9I	CCNGG	3 cut(s)	390, 835, 1058
MunI	CAATTG	3 cut(s)	852, 1100, 1116
Mva1269I	GAATGC	1 cut(s)	1235
MvaI	CCWGG	2 cut(s)	835, 1058
MwoI	GCNNNNNNNGC	2 cut(s)	1217, 1602
NaeI	GCCGGC	1 cut(s)	402
NciI	CCSGG	1 cut(s)	390
NgoMIV	GCCGGC	1 cut(s)	400
NheI	GCTAGC	1 cut(s)	551
NlaIV	GGNNCC	9 cut(s)	101, 311, 504, 525, 567, 629, 1275, 1318, 1524
NmuCI	GTSAC	5 cut(s)	1028, 1150, 1204, 1454, 1542
NsiI	ATGCAT	1 cut(s)	675
NspI	RCATGY	1 cut(s)	809
PagI	TCATGA	2 cut(s)	1189, 1531
PctI	GAATGC	1 cut(s)	1235
PdiI	GCCGGC	1 cut(s)	402
PfeI	GAWTC	3 cut(s)	420, 914, 1010
PflMI	CCANNNNNTGG	2 cut(s)	186, 579
PfoI	TCCNGGA	1 cut(s)	388
PkrI	GCNGC	4 cut(s)	325, 362, 1213, 1307
PleI	GAGTC	1 cut(s)	1047
PpsI	GAGTC	1 cut(s)	1047
PpuMI	RGGWCCY	2 cut(s)	100, 502
PshBI	ATTAAT	2 cut(s)	1005, 1728
Psp5II	RGGWCCY	2 cut(s)	100, 502
Psp6I	CCWGG	2 cut(s)	833, 1056
PspGI	CCWGG	2 cut(s)	833, 1056
PspN4I	GGNNCC	9 cut(s)	101, 311, 504, 525, 567, 629, 1275, 1318, 1524
PspPI	GGNCC	8 cut(s)	100, 197, 502, 587, 628, 791, 1071, 1340
PspPPI	RGGWCCY	2 cut(s)	100, 502
PsuI	RGATCY	6 cut(s)	145, 309, 565, 987, 1273, 1522
RsaI	GTAC	3 cut(s)	845, 859, 1170
RsaNI	GTAC	3 cut(s)	844, 858, 1169
SaqAI	TTAA	6 cut(s)	498, 608, 801, 1005, 1173, 1728
SatI	GCNGC	4 cut(s)	324, 361, 1212, 1306
Sau96I	GGNCC	8 cut(s)	100, 197, 502, 587, 628, 791, 1071, 1340
ScaI	AGTACT	1 cut(s)	845
SchI	GAGTC	1 cut(s)	1047
ScrFI	CCNGG	3 cut(s)	390, 835, 1058
SduI	GDGCHC	3 cut(s)	280, 734, 813
SfcI	CTRYAG	4 cut(s)	94, 652, 1399, 1569
SinI	GGWCC	6 cut(s)	100, 502, 628, 791, 1071, 1340
SmlI	CTYRAG	3 cut(s)	812, 1015, 1172
SmoI	CTYRAG	3 cut(s)	812, 1015, 1172
SsiI	CCGC	2 cut(s)	982, 1332
SspMI	CTAG	4 cut(s)	552, 584, 759, 1614
StyD4I	CCNGG	3 cut(s)	388, 833, 1056
StyI	CCWWGG	1 cut(s)	1067
TaaI	ACNGT	2 cut(s)	971, 1168
TaiI	ACGT	2 cut(s)	1035, 1157
TaqI	TCGA	2 cut(s)	1239, 1732
TatI	WGTACW	2 cut(s)	843, 1168
TfiI	GAWTC	3 cut(s)	420, 914, 1010
Tru1I	TTAA	6 cut(s)	498, 608, 801, 1005, 1173, 1728
Tru9I	TTAA	6 cut(s)	498, 608, 801, 1005, 1173, 1728
TscAI	CASTG	4 cut(s)	580, 976, 1171, 1459
TseFI	GTSAC	5 cut(s)	1028, 1150, 1204, 1454, 1542
TseI	GCWGC	4 cut(s)	323, 360, 1211, 1305
Tsp45I	GTSAC	5 cut(s)	1028, 1150, 1204, 1454, 1542
TspDTI	ATGAA	6 cut(s)	333, 658, 1023, 1178, 1206, 1520
TspRI	CASTG	4 cut(s)	580, 976, 1171, 1459
Van91I	CCANNNNNTGG	2 cut(s)	186, 579
Vha464I	CTTAAG	1 cut(s)	1172
VpaK11BI	GGWCC	6 cut(s)	100, 502, 628, 791, 1071, 1340
VspI	ATTAAT	2 cut(s)	1005, 1728
XapI	RAATTY	3 cut(s)	216, 1296, 1404
XceI	RCATGY	1 cut(s)	809
XcmI	CCANNNNNNNNNTGG	2 cut(s)	576, 597
XspI	CTAG	4 cut(s)	552, 584, 759, 1614
ZraI	GACGTC	1 cut(s)	1033
ZrmI	AGTACT	1 cut(s)	845
Zsp2I	ATGCAT	1 cut(s)	675

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.