F-box-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G20270 AT3G20270 AT3G20270 AT3G20270 AT3G20270 AT3G20270 |
| fragaria_vesca | FvH4_6g36931 FvH4_6g36931 FvH4_6g36931 |
| malus_domestica | MD09G1165400.v1.1 MD17G1162300.v1.1 |
| prunus_persica | Prupe.3G023100_v2.0.a1 |
| pyrus_communis | pycom09g08280 |
| rosa_chinensis | RchiOBHm_Chr2g0149371 RchiOBHm_Chr2g0149381 |
| rosa_laevigata | RLG00000020396 RLG00000020402 |
| rosa_multiflora | Rmu_co8329327.1_g000001 Rmu_sc0000873.1_g000018 Rmu_sc0006867.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00098150 Rroxscaffold_2G00098160 |
| rosa_rugosa | Rorug02G0411900 |
| rosa_samantha | Rh2AG471600 Rh2AG471700 Rh2BG483900 Rh2CG457600 Rh2CG457700 Rh2DG492900 Rh2DG493000 |
| rosa_wichuraiana | Rw2G038380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AbsI | CCTCGAGG | 1 cut(s) | 207 |
| AcsI | RAATTY | 1 cut(s) | 51 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 422 |
| AgsI | TTSAA | 1 cut(s) | 333 |
| AjnI | CCWGG | 1 cut(s) | 193 |
| AluBI | AGCT | 6 cut(s) | 28, 146, 182, 236, 322, 328 |
| AluI | AGCT | 6 cut(s) | 28, 146, 182, 236, 322, 328 |
| Alw26I | GTCTC | 1 cut(s) | 76 |
| Ama87I | CYCGRG | 1 cut(s) | 207 |
| AoxI | GGCC | 3 cut(s) | 111, 191, 292 |
| ApeKI | GCWGC | 3 cut(s) | 146, 233, 319 |
| ApoI | RAATTY | 1 cut(s) | 51 |
| AspS9I | GGNCC | 3 cut(s) | 111, 197, 292 |
| AsuHPI | GGTGA | 1 cut(s) | 284 |
| AvaI | CYCGRG | 1 cut(s) | 207 |
| AvaII | GGWCC | 1 cut(s) | 197 |
| BaeGI | GKGCMC | 1 cut(s) | 85 |
| BbvI | GCAGC | 3 cut(s) | 133, 245, 331 |
| BccI | CCATC | 1 cut(s) | 263 |
| BciT130I | CCWGG | 1 cut(s) | 195 |
| BclI | TGATCA | 1 cut(s) | 34 |
| BcoDI | GTCTC | 1 cut(s) | 76 |
| BfaI | CTAG | 1 cut(s) | 351 |
| BisI | GCNGC | 3 cut(s) | 147, 234, 320 |
| BlsI | GCNGC | 3 cut(s) | 148, 235, 321 |
| Bme1390I | CCNGG | 1 cut(s) | 195 |
| Bme18I | GGWCC | 1 cut(s) | 197 |
| BmeT110I | CYCGRG | 1 cut(s) | 207 |
| BmgT120I | GGNCC | 3 cut(s) | 111, 197, 292 |
| BmiI | GGNNCC | 1 cut(s) | 367 |
| BmrFI | CCNGG | 1 cut(s) | 195 |
| BpuEI | CTTGAG | 2 cut(s) | 344, 383 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 422 |
| BseBI | CCWGG | 1 cut(s) | 195 |
| BseGI | GGATG | 1 cut(s) | 274 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 422 |
| BseMII | CTCAG | 1 cut(s) | 87 |
| BseRI | GAGGAG | 1 cut(s) | 238 |
| BseSI | GKGCMC | 1 cut(s) | 85 |
| BseXI | GCAGC | 3 cut(s) | 133, 245, 331 |
| BseYI | CCCAGC | 1 cut(s) | 178 |
| BshFI | GGCC | 3 cut(s) | 113, 193, 294 |
| BsiHKCI | CYCGRG | 1 cut(s) | 207 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 422 |
| BsmAI | GTCTC | 1 cut(s) | 76 |
| BsnI | GGCC | 3 cut(s) | 113, 193, 294 |
| BsoBI | CYCGRG | 1 cut(s) | 207 |
| Bsp1286I | GDGCHC | 1 cut(s) | 85 |
| Bsp143I | GATC | 2 cut(s) | 34, 402 |
| BspANI | GGCC | 3 cut(s) | 113, 193, 294 |
| BspCNI | CTCAG | 1 cut(s) | 86 |
| BspLI | GGNNCC | 1 cut(s) | 367 |
| BssMI | GATC | 2 cut(s) | 34, 402 |
| Bst2UI | CCWGG | 1 cut(s) | 195 |
| Bst4CI | ACNGT | 1 cut(s) | 108 |
| Bst6I | CTCTTC | 1 cut(s) | 352 |
| BstC8I | GCNNGC | 1 cut(s) | 144 |
| BstDEI | CTNAG | 1 cut(s) | 73 |
| BstF5I | GGATG | 1 cut(s) | 274 |
| BstKTI | GATC | 2 cut(s) | 37, 405 |
| BstMAI | GTCTC | 1 cut(s) | 76 |
| BstMBI | GATC | 2 cut(s) | 34, 402 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 152, 179, 325 |
| BstNI | CCWGG | 1 cut(s) | 195 |
| BstSCI | CCNGG | 1 cut(s) | 193 |
| BstSLI | GKGCMC | 1 cut(s) | 85 |
| BstV1I | GCAGC | 3 cut(s) | 133, 245, 331 |
| BsuRI | GGCC | 3 cut(s) | 113, 193, 294 |
| BtsCI | GGATG | 1 cut(s) | 274 |
| BtsIMutI | CAGTG | 1 cut(s) | 113 |
| Cac8I | GCNNGC | 1 cut(s) | 144 |
| Cfr13I | GGNCC | 3 cut(s) | 111, 197, 292 |
| CviAII | CATG | 1 cut(s) | 362 |
| DdeI | CTNAG | 1 cut(s) | 73 |
| DpnI | GATC | 2 cut(s) | 36, 404 |
| DpnII | GATC | 2 cut(s) | 34, 402 |
| Eam1104I | CTCTTC | 1 cut(s) | 352 |
| EarI | CTCTTC | 1 cut(s) | 352 |
| Eco47I | GGWCC | 1 cut(s) | 197 |
| Eco88I | CYCGRG | 1 cut(s) | 207 |
| EcoRII | CCWGG | 1 cut(s) | 193 |
| FaeI | CATG | 1 cut(s) | 365 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 135, 167, 306, 338 |
| FatI | CATG | 1 cut(s) | 361 |
| FbaI | TGATCA | 1 cut(s) | 34 |
| Fnu4HI | GCNGC | 3 cut(s) | 147, 234, 320 |
| FokI | GGATG | 1 cut(s) | 281 |
| Fsp4HI | GCNGC | 3 cut(s) | 147, 234, 320 |
| FspBI | CTAG | 1 cut(s) | 351 |
| GluI | GCNGC | 3 cut(s) | 147, 234, 320 |
| GsaI | CCCAGC | 1 cut(s) | 182 |
| HaeIII | GGCC | 3 cut(s) | 113, 193, 294 |
| Hin1II | CATG | 1 cut(s) | 365 |
| HindIII | AAGCTT | 1 cut(s) | 26 |
| HphI | GGTGA | 1 cut(s) | 284 |
| Hpy166II | GTNNAC | 1 cut(s) | 251 |
| Hpy188I | TCNGA | 1 cut(s) | 76 |
| Hpy188III | TCNNGA | 3 cut(s) | 32, 266, 400 |
| Hpy8I | GTNNAC | 1 cut(s) | 251 |
| HpyCH4III | ACNGT | 1 cut(s) | 108 |
| HpyCH4V | TGCA | 2 cut(s) | 233, 361 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 152, 179, 325 |
| HpyF3I | CTNAG | 1 cut(s) | 73 |
| Hsp92II | CATG | 1 cut(s) | 365 |
| Ksp22I | TGATCA | 1 cut(s) | 34 |
| Kzo9I | GATC | 2 cut(s) | 34, 402 |
| LpnPI | CCDG | 7 cut(s) | 45, 81, 106, 180, 192, 207, 251 |
| Lsp1109I | GCAGC | 3 cut(s) | 133, 245, 331 |
| MaeI | CTAG | 1 cut(s) | 351 |
| MalI | GATC | 2 cut(s) | 36, 404 |
| MboI | GATC | 2 cut(s) | 34, 402 |
| MboII | GAAGA | 2 cut(s) | 339, 375 |
| MhlI | GDGCHC | 1 cut(s) | 85 |
| MluCI | AATT | 1 cut(s) | 51 |
| MnlI | CCTC | 5 cut(s) | 203, 216, 216, 355, 415 |
| MspR9I | CCNGG | 1 cut(s) | 195 |
| MvaI | CCWGG | 1 cut(s) | 195 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 152, 179, 325 |
| NdeII | GATC | 2 cut(s) | 34, 402 |
| NlaIII | CATG | 1 cut(s) | 365 |
| NlaIV | GGNNCC | 1 cut(s) | 367 |
| PaeR7I | CTCGAG | 1 cut(s) | 207 |
| PkrI | GCNGC | 3 cut(s) | 148, 235, 321 |
| Psp6I | CCWGG | 1 cut(s) | 193 |
| PspFI | CCCAGC | 1 cut(s) | 178 |
| PspGI | CCWGG | 1 cut(s) | 193 |
| PspN4I | GGNNCC | 1 cut(s) | 367 |
| PspPI | GGNCC | 3 cut(s) | 111, 197, 292 |
| PspXI | VCTCGAGB | 1 cut(s) | 207 |
| SatI | GCNGC | 3 cut(s) | 147, 234, 320 |
| Sau3AI | GATC | 2 cut(s) | 34, 402 |
| Sau96I | GGNCC | 3 cut(s) | 111, 197, 292 |
| ScrFI | CCNGG | 1 cut(s) | 195 |
| SduI | GDGCHC | 1 cut(s) | 85 |
| SetI | ASST | 9 cut(s) | 30, 148, 184, 191, 202, 238, 324, 330, 379 |
| Sfr274I | CTCGAG | 1 cut(s) | 207 |
| SinI | GGWCC | 1 cut(s) | 197 |
| SlaI | CTCGAG | 1 cut(s) | 207 |
| SmlI | CTYRAG | 3 cut(s) | 207, 323, 398 |
| SmoI | CTYRAG | 3 cut(s) | 207, 323, 398 |
| Sse9I | AATT | 1 cut(s) | 51 |
| SspMI | CTAG | 1 cut(s) | 351 |
| StyD4I | CCNGG | 1 cut(s) | 193 |
| TaaI | ACNGT | 1 cut(s) | 108 |
| TaqI | TCGA | 2 cut(s) | 61, 208 |
| TasI | AATT | 1 cut(s) | 51 |
| TscAI | CASTG | 1 cut(s) | 113 |
| TseI | GCWGC | 3 cut(s) | 146, 233, 319 |
| TspDTI | ATGAA | 2 cut(s) | 6, 46 |
| TspRI | CASTG | 1 cut(s) | 113 |
| VpaK11BI | GGWCC | 1 cut(s) | 197 |
| XapI | RAATTY | 1 cut(s) | 51 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 186 |
| XhoI | CTCGAG | 1 cut(s) | 207 |
| XspI | CTAG | 1 cut(s) | 351 |