Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0001993

Physical Location & Seq

Genomic Coordinates Reverse (-)

4569636 .. 4579411

Gene Structure 9776 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G063900.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2682 bp

ATGTTCAGAAGCATTTCAAACAAGGAAGCCCCATCCTTCTCACACTTCCCATACACCCCACCACACCCTACCAACTCTCCTTCCTCCCTCTCCCAAACCCTAAGCCTCCATGCCTCCCCAACCTCCTCTCCCCTCCACCCTCTCATTCCTACTTCCTCCAAGAACCCCGACCTCCTCACCGCCTACCGCTGCATCTCCTCCGTCCTCCAAAAGGACGGCCAGATCTTGTCCATTGCCGCATCCAACGGCCTCGTTTACACCGGCTCCACCACCAACCTCATAAGGCTCTGGAAGCTCCCTGAGTTCACAGAATGTGGGCAGCTCAAGGCCAAGGCTTGCATGGTTGTGGCAATCGAAGTTTCCCATGACAAGATCTATGCAGCTTATGGCGACGGCAAGGTTAGGGTTTGGCAGAGAGCATGGGATGGGGGGTTGAAGCATGTCAGGTTGGCTACTATTCCAAAGACCGGAAGTTATGTTCGGAGCTTATACATTGCCGGCAAAGATAAGACTATAAAGCATACGGGTGCTGTAACATCACTAGCTATCCATGTATCCGAGGACATCCTATACTCAGCTTCCACAGACAAAACAGTCAAAGTGTGGCGAATTTCGGACCTTAAGTGCATTGAGACCATCCAAGCTCATTCTGGGCCCATCAATGCCATCATTGTCGCCGACGACGGGATCCTTTACACAGCCTCAGACGATGCTACAATCCGAGTCTGGCGTCGTAACTTTTGCAGCGGCGACCAGCTTCCTCACTCACTCACTATGACTCTACCCGCCAAGTGCTCTCCGGTCAAAACCCTAACCCTAACCTCAGATGGCGGGGTCCTCTACGGCGGGTGCACCGACGGGTACATACACTATTGGCTCAAGGGCTGGTTCTCAGGCCAATTGCAGTATGGGGGTACACTCCAAGGCCACACACATGCAGTGATGTGTTTGGCCAGCGTGGCGAACTACGTGGTGAGTGGGTCCGCTGACTCAACCAGTAGGATTTGGTCTAGGGATGTAGAGGATGGCCAGCACACGTGTCTAGCAGTGCTTGTGGGGCACAGAGGCCCAATCAGGTGTGTCGCGGCATTTTATGGACGATTAGGGGAAGAGACTGAGGAGGGTTGCACAATTTGCACTGGGAGTCTTGATGGGGTTCTTAAAGTGTGGCCTTCCAGGTCCCTCTTCAGAGTGGATCGAGTTCTGAAATTTACTACTGCTTATGTTGCATTGGAGCCAGTGAATCATTTCTTGGGATACCGTGGTTATTGTGGTTTGAGCTATAATATTAAAATGGGTGGTGGAAAAGATAAGCAACGTGGCAGGGATCGTAACAAAAAGATCAGAACAACTAATGCTGTATGGAGACCAGTCAGTACTCAAGCCACTTCCAATGAAGAATGCTCAGTAAAGGTGACCACAGATGAGCTGGAATCTGATACTCAAGTCCAAGAAGTGCACCATTGCACATCTACCAGAATTTCAAGTGCTCACAATGTCGTAGAGGTGGCTGCAACGAACTTTACTGCTAGTTCCAGTGCATTGCAAGATAATGGAGAAAAGACAGTCTTCAGAGGAGAATCAGTGGTTTCTACTGAAAAGCACTCAATTTCAGTTGAGGTTGGTGCTTCTTTGGTTCGCTTTATTAGAGGAAAAGGGGGATCTACACAGAGAGAGATTGAAGATGAGATGGGAGTTAAGATTATAATCCCCTCATCAAAGGAGGAGGATTCAGTTATTATTGAAGGCATCTCAATGGAAAGTATATCTAGAGCTTCTGAGAAGATACATACTATAATTGATGAGGCAGTTAAGAGCCAAAATCTTGATTACTCTCACTTCATTTCACTTCCATTGGCAATACATCCTGAATTAGTTGATAAGCTTGTCAACTTTCAGAACTCCATCCTGGGAATTAGTGATTCTTGTGTAGATGAGAAAATGAATAGTGATTCAAATGAAGATACTTCTGAGAATGAAGGAGAAGACCAAAAGTTAGAGAAAGGAACTGATGTCCCAGTTGAACTTAATGTTGAAGGTGACAGTGAGCAAGTTAAAGTGAATCTAACTCAGATACCTCTTGTCAGTTATGCTCCTAAAACATCAAAGGCTTCCACCCTATCTGACTTGGGAATTGAAAAGTCAATATTCATTAAACCAAAAACGTTTCACTTAACTGTGCTTATGCTGAAGTTGTGGAACAAAGACCGAGTTCATGCAGCTATTGAGGTTTTGCAGAGCGTCTCTTCAAAAGTGATCGAAGCCTTAGATAATCGTCCTGTCTCCATAAGACTTCAGGGACTGAATTGTATGAGAGGTTCCTTGGCCAAAGCTGGTGTTGTCTATGCTCCTGTTGAAGAAATTGGCAGCGAGGGGAGACTTCTGCGTGCTTGTCAAGTCATTACCGATGCATATACTAAAGCTGGGCTTGTTCTAGAGAAAGATGCTAATCAGAAATTAAAGTTGCATGCAACCGTGATGAATGCAAGGCATAGCAAAAGGACGAATCGAACGAGAAAGGTTCAATCCTTTGATGCCCGTGGCATTTTCAAGCAGTATGGATCCCAGGAATGGGGAGAGTATCTTATCCATGAAGCTCATCTTTCACAAAGGTTTGTGTTTGATGACAACGGATATTACCATTGTTGTGCTTCTATACCTTTCCCTGAAACATGTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AKAP7_NLS Auxin_canalis KH_1 PH_2

Protein Analysis

894

Amino Acids

98.11

Weight (kDa)

7.16

Isoelectric Point (pI)

38.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001993)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16230 AT3G16230 AT3G16230 AT3G16230 AT3G16230 AT3G16230 AT3G16230 AT3G16230 AT3G16230 AT3G16230 AT3G16230 AT3G16230 AT3G16230
fragaria_vesca	FvH4_6g31950 FvH4_6g31960 FvH4_6g31960 FvH4_6g31960
malus_domestica	MD09G1207800.v1.1 MD17G1188900.v1.1
prunus_persica	Prupe.3G063900_v2.0.a1 Prupe.3G063900_v2.0.a1
pyrus_communis	pycom09g12390 pycom17g19720
rosa_chinensis	RchiOBHm_Chr2g0139371 RchiOBHm_Chr2g0139461
rosa_laevigata	RLG00000019809 RLG00000019812
rosa_multiflora	Rmu_co8444677.1_g000001 Rmu_co8444769.1_g000001 Rmu_sc0001983.1_g000003
rosa_roxburghii	Rroxscaffold_2G00105420 Rroxscaffold_2G00105430
rosa_rugosa	Rorug02G0358100
rosa_samantha	Rh2AG407200 Rh2AG407400 Rh2BG417500 Rh2BG418000 Rh2CG393200 Rh2CG393400 Rh2DG426600 Rh2DG426800
rosa_wichuraiana	Rw2G032990 Rw2G033000 Rw2G033250 Rw2G033260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1706
AasI	GACNNNNNNGTC	1 cut(s)	593
AccII	CGCG	1 cut(s)	1085
AciI	CCGC	9 cut(s)	180, 187, 237, 747, 786, 831, 846, 984, 1085
AclI	AACGTT	1 cut(s)	2165
AclWI	GGATC	7 cut(s)	682, 695, 1203, 1335, 1669, 2556, 2569
AcoI	YGGCCR	4 cut(s)	217, 951, 1027, 2325
AcsI	RAATTY	3 cut(s)	609, 1208, 1479
AcuI	CTGAAG	4 cut(s)	1171, 1555, 2210, 2279
AcvI	CACGTG	1 cut(s)	1038
AcyI	GRCGYC	1 cut(s)	730
AfaI	GTAC	3 cut(s)	863, 916, 1378
AfiI	CCNNNNNNNGG	5 cut(s)	211, 467, 684, 2571, 2572
AflII	CTTAAG	1 cut(s)	620
AflIII	ACRYGT	3 cut(s)	1035, 1037, 2672
AjnI	CCWGG	3 cut(s)	1175, 1908, 2565
AjuI	GAANNNNNNNTTGG	2 cut(s)	1235, 1267
AloI	GAACNNNNNNTCC	2 cut(s)	462, 494
Alw21I	GWGCWC	4 cut(s)	797, 854, 1461, 1492
Alw26I	GTCTC	6 cut(s)	626, 1106, 1360, 2248, 2287, 2371
Alw44I	GTGCAC	2 cut(s)	850, 1457
AlwI	GGATC	7 cut(s)	682, 695, 1203, 1335, 1669, 2556, 2569
AlwNI	CAGNNNCTG	1 cut(s)	2302
ApaI	GGGCCC	1 cut(s)	657
ApaLI	GTGCAC	2 cut(s)	850, 1457
ApeKI	GCWGC	7 cut(s)	189, 319, 380, 744, 1511, 2219, 2367
ApoI	RAATTY	3 cut(s)	609, 1208, 1479
Asp700I	GAANNNNTTC	2 cut(s)	13, 1247
AspS9I	GGNCC	7 cut(s)	616, 653, 654, 835, 981, 1067, 1179
AsuHPI	GGTGA	4 cut(s)	169, 985, 1426, 2051
AvaII	GGWCC	4 cut(s)	616, 835, 981, 1179
BaeGI	GKGCMC	4 cut(s)	657, 854, 1062, 1461
BaeI	ACNNNNGTAYC	4 cut(s)	1249, 1282, 1431, 1464
BalI	TGGCCA	3 cut(s)	953, 1029, 2327
BamHI	GGATCC	2 cut(s)	687, 2561
BanII	GRGCYC	1 cut(s)	657
BbrPI	CACGTG	1 cut(s)	1038
BbsI	GAAGAC	2 cut(s)	1561, 1992
Bbv12I	GWGCWC	4 cut(s)	797, 854, 1461, 1492
BbvI	GCAGC	7 cut(s)	176, 331, 392, 756, 1498, 2231, 2379
BceAI	ACGGC	4 cut(s)	232, 262, 409, 859
BciT130I	CCWGG	3 cut(s)	1177, 1910, 2567
BciVI	GTATCC	2 cut(s)	565, 1250
BcoDI	GTCTC	6 cut(s)	626, 1106, 1360, 2248, 2287, 2371
BfaI	CTAG	6 cut(s)	542, 1011, 1043, 1530, 1770, 2435
BfrI	CTTAAG	1 cut(s)	620
BfuI	GTATCC	2 cut(s)	565, 1250
BglI	GCCNNNNNGGC	1 cut(s)	959
BglII	AGATCT	2 cut(s)	222, 372
BmcAI	AGTACT	1 cut(s)	1378
Bme1390I	CCNGG	3 cut(s)	1177, 1910, 2567
Bme18I	GGWCC	4 cut(s)	616, 835, 981, 1179
BmgT120I	GGNCC	7 cut(s)	616, 653, 654, 835, 981, 1067, 1179
BmiI	GGNNCC	9 cut(s)	265, 655, 689, 836, 982, 1181, 1236, 2320, 2563
BmrFI	CCNGG	3 cut(s)	1177, 1910, 2567
BmrI	ACTGGG	2 cut(s)	1149, 2012
BmsI	GCATC	7 cut(s)	201, 248, 700, 1758, 2398, 2434, 2524
BmuI	ACTGGG	2 cut(s)	1149, 2012
BpiI	GAAGAC	2 cut(s)	1561, 1992
Bpu10I	CCTNAGC	1 cut(s)	101
BpuEI	CTTGAG	4 cut(s)	308, 863, 1365, 1428
BsaAI	YACGTR	2 cut(s)	970, 1038
BsaBI	GATNNNNATC	2 cut(s)	1706, 2448
BsaHI	GRCGYC	1 cut(s)	730
BsaI	GGTCTC	2 cut(s)	626, 1360
BsaJI	CCNNGG	8 cut(s)	330, 558, 922, 1261, 1909, 2322, 2539, 2565
BsaWI	WCCGGW	2 cut(s)	467, 799
BsaXI	ACNNNNNCTCC	8 cut(s)	61, 91, 112, 142, 248, 278, 1569, 1599
Bsc4I	CCNNNNNNNGG	5 cut(s)	211, 467, 684, 2571, 2572
Bse118I	RCCGGY	2 cut(s)	260, 497
Bse1I	ACTGG	6 cut(s)	996, 1144, 1238, 1370, 1536, 2018
Bse3DI	GCAATG	4 cut(s)	231, 492, 1462, 1541
Bse8I	GATNNNNATC	2 cut(s)	1706, 2448
BseBI	CCWGG	3 cut(s)	1177, 1910, 2567
BseDI	CCNNGG	8 cut(s)	330, 558, 922, 1261, 1909, 2322, 2539, 2565
BseGI	GGATG	9 cut(s)	32, 239, 430, 564, 636, 1021, 1030, 1864, 1905
BseJI	GATNNNNATC	2 cut(s)	1706, 2448
BseLI	CCNNNNNNNGG	5 cut(s)	211, 467, 684, 2571, 2572
BseMI	GCAATG	4 cut(s)	231, 492, 1462, 1541
BseNI	ACTGG	6 cut(s)	996, 1144, 1238, 1370, 1536, 2018
BseRI	GAGGAG	6 cut(s)	115, 164, 187, 1133, 1590, 1739
BseSI	GKGCMC	4 cut(s)	657, 854, 1062, 1461
BseXI	GCAGC	7 cut(s)	176, 331, 392, 756, 1498, 2231, 2379
BseYI	CCCAGC	1 cut(s)	2423
Bsh1236I	CGCG	1 cut(s)	1085
BsiHKAI	GWGCWC	4 cut(s)	797, 854, 1461, 1492
BsiSI	CCGG	4 cut(s)	261, 468, 498, 800
BslFI	GGGAC	3 cut(s)	1165, 2000, 2313
BslI	CCNNNNNNNGG	5 cut(s)	211, 467, 684, 2571, 2572
BsmAI	GTCTC	6 cut(s)	626, 1106, 1360, 2248, 2287, 2371
BsmBI	CGTCTC	1 cut(s)	2248
BsmFI	GGGAC	3 cut(s)	1165, 2000, 2313
BsmI	GAATGC	2 cut(s)	1406, 2488
Bso31I	GGTCTC	2 cut(s)	626, 1360
Bsp120I	GGGCCC	1 cut(s)	653
Bsp1286I	GDGCHC	6 cut(s)	657, 797, 854, 1062, 1461, 1492
Bsp143I	GATC	9 cut(s)	222, 372, 687, 1195, 1327, 1341, 1661, 2256, 2561
BspACI	CCGC	9 cut(s)	180, 187, 237, 747, 786, 831, 846, 984, 1085
BspFNI	CGCG	1 cut(s)	1085
BspLI	GGNNCC	9 cut(s)	265, 655, 689, 836, 982, 1181, 1236, 2320, 2563
BspPI	GGATC	7 cut(s)	682, 695, 1203, 1335, 1669, 2556, 2569
BspTI	CTTAAG	1 cut(s)	620
BspTNI	GGTCTC	2 cut(s)	626, 1360
BsrDI	GCAATG	4 cut(s)	231, 492, 1462, 1541
BsrFI	RCCGGY	2 cut(s)	260, 497
BsrI	ACTGG	6 cut(s)	996, 1144, 1238, 1370, 1536, 2018
BssAI	RCCGGY	2 cut(s)	260, 497
BssECI	CCNNGG	8 cut(s)	330, 558, 922, 1261, 1909, 2322, 2539, 2565
BssMI	GATC	9 cut(s)	222, 372, 687, 1195, 1327, 1341, 1661, 2256, 2561
BssNI	GRCGYC	1 cut(s)	730
BssT1I	CCWWGG	3 cut(s)	330, 922, 2322
Bst2UI	CCWGG	3 cut(s)	1177, 1910, 2567
Bst4CI	ACNGT	6 cut(s)	595, 1262, 1567, 2045, 2179, 2476
Bst6I	CTCTTC	3 cut(s)	1104, 1190, 2251
BstACI	GRCGYC	1 cut(s)	730
BstAFI	CTTAAG	1 cut(s)	620
BstAPI	GCANNNNNTGC	1 cut(s)	1134
BstBAI	YACGTR	2 cut(s)	970, 1038
BstC8I	GCNNGC	6 cut(s)	337, 499, 955, 1031, 2388, 2469
BstDSI	CCRYGG	2 cut(s)	1261, 2539
BstEII	GGTNACC	1 cut(s)	1414
BstENI	CCTNNNNNAGG	1 cut(s)	209
BstF5I	GGATG	9 cut(s)	32, 239, 430, 564, 636, 1021, 1030, 1864, 1905
BstFNI	CGCG	1 cut(s)	1085
BstKTI	GATC	9 cut(s)	225, 375, 690, 1198, 1330, 1344, 1664, 2259, 2564
BstMAI	GTCTC	6 cut(s)	626, 1106, 1360, 2248, 2287, 2371
BstMBI	GATC	9 cut(s)	222, 372, 687, 1195, 1327, 1341, 1661, 2256, 2561
BstMWI	GCNNNNNNNGC	5 cut(s)	292, 959, 1057, 1134, 1226
BstNI	CCWGG	3 cut(s)	1177, 1910, 2567
BstNSI	RCATGY	4 cut(s)	443, 938, 2471, 2676
BstPI	GGTNACC	1 cut(s)	1414
BstSCI	CCNGG	3 cut(s)	1175, 1908, 2565
BstSLI	GKGCMC	4 cut(s)	657, 854, 1062, 1461
BstUI	CGCG	1 cut(s)	1085
BstV1I	GCAGC	7 cut(s)	176, 331, 392, 756, 1498, 2231, 2379
BstV2I	GAAGAC	2 cut(s)	1561, 1992
BstX2I	RGATCY	5 cut(s)	222, 372, 687, 1661, 2561
BstYI	RGATCY	5 cut(s)	222, 372, 687, 1661, 2561
BsuI	GTATCC	2 cut(s)	565, 1250
BtgI	CCRYGG	2 cut(s)	1261, 2539
BtsCI	GGATG	9 cut(s)	32, 239, 430, 564, 636, 1021, 1030, 1864, 1905
BtsI	GCAGTG	2 cut(s)	945, 1053
BtsIMutI	CAGTG	7 cut(s)	945, 1053, 1137, 1245, 1543, 1590, 2050
Cac8I	GCNNGC	6 cut(s)	337, 499, 955, 1031, 2388, 2469
CaiI	CAGNNNCTG	1 cut(s)	2302
Cfr10I	RCCGGY	2 cut(s)	260, 497
Cfr13I	GGNCC	7 cut(s)	616, 653, 654, 835, 981, 1067, 1179
CseI	GACGC	2 cut(s)	719, 2230
Csp6I	GTAC	3 cut(s)	862, 915, 1377
CviQI	GTAC	3 cut(s)	862, 915, 1377
DpnI	GATC	9 cut(s)	224, 374, 689, 1197, 1329, 1343, 1663, 2258, 2563
DpnII	GATC	9 cut(s)	222, 372, 687, 1195, 1327, 1341, 1661, 2256, 2561
DrdI	GACNNNNNNGTC	1 cut(s)	593
DseDI	GACNNNNNNGTC	1 cut(s)	593
EaeI	YGGCCR	4 cut(s)	217, 951, 1027, 2325
Eam1104I	CTCTTC	3 cut(s)	1104, 1190, 2251
EarI	CTCTTC	3 cut(s)	1104, 1190, 2251
Eco130I	CCWWGG	3 cut(s)	330, 922, 2322
Eco24I	GRGCYC	1 cut(s)	657
Eco31I	GGTCTC	2 cut(s)	626, 1360
Eco47I	GGWCC	4 cut(s)	616, 835, 981, 1179
Eco57I	CTGAAG	4 cut(s)	1171, 1555, 2210, 2279
Eco72I	CACGTG	1 cut(s)	1038
Eco91I	GGTNACC	1 cut(s)	1414
EcoNI	CCTNNNNNAGG	1 cut(s)	209
EcoO109I	RGGNCCY	2 cut(s)	835, 1179
EcoO65I	GGTNACC	1 cut(s)	1414
EcoRII	CCWGG	3 cut(s)	1175, 1908, 2565
EcoT14I	CCWWGG	3 cut(s)	330, 922, 2322
EcoT22I	ATGCAT	1 cut(s)	2413
EcoT38I	GRGCYC	1 cut(s)	657
ErhI	CCWWGG	3 cut(s)	330, 922, 2322
Esp3I	CGTCTC	1 cut(s)	2248
FalI	AAGNNNNNCTT	6 cut(s)	1553, 1585, 2412, 2444, 2586, 2618
FaqI	GGGAC	3 cut(s)	1165, 2000, 2313
FauI	CCCGC	3 cut(s)	793, 824, 839
FokI	GGATG	9 cut(s)	19, 226, 437, 551, 623, 1028, 1037, 1851, 1892
FriOI	GRGCYC	1 cut(s)	657
FspBI	CTAG	6 cut(s)	542, 1011, 1043, 1530, 1770, 2435
GsaI	CCCAGC	1 cut(s)	2427
HapII	CCGG	4 cut(s)	261, 468, 498, 800
HgaI	GACGC	2 cut(s)	719, 2230
Hin1I	GRCGYC	1 cut(s)	730
HincII	GTYRAC	1 cut(s)	1891
HindII	GTYRAC	1 cut(s)	1891
HindIII	AAGCTT	1 cut(s)	1883
HpaII	CCGG	4 cut(s)	261, 468, 498, 800
HphI	GGTGA	4 cut(s)	169, 985, 1426, 2051
Hpy166II	GTNNAC	6 cut(s)	256, 306, 852, 917, 1459, 1891
Hpy188III	TCNNGA	6 cut(s)	289, 1148, 1770, 1826, 1868, 2435
Hpy8I	GTNNAC	6 cut(s)	256, 306, 852, 917, 1459, 1891
Hpy99I	CGWCG	5 cut(s)	395, 683, 686, 735, 860
HpyAV	CCTTC	6 cut(s)	46, 90, 1182, 1739, 1973, 2030
HpyCH4III	ACNGT	6 cut(s)	595, 1262, 1567, 2045, 2179, 2476
HpyCH4IV	ACGT	4 cut(s)	969, 1037, 1318, 2165
HpyF10VI	GCNNNNNNNGC	5 cut(s)	292, 959, 1057, 1134, 1226
HpySE526I	ACGT	4 cut(s)	969, 1037, 1318, 2165
Hsp92I	GRCGYC	1 cut(s)	730
KroI	GCCGGC	1 cut(s)	497
KroNI	GCCGGC	1 cut(s)	499
Kzo9I	GATC	9 cut(s)	222, 372, 687, 1195, 1327, 1341, 1661, 2256, 2561
LmnI	GCTCC	6 cut(s)	269, 300, 483, 1234, 2098, 2353
Lsp1109I	GCAGC	7 cut(s)	176, 331, 392, 756, 1498, 2231, 2379
LweI	GCATC	7 cut(s)	201, 248, 700, 1758, 2398, 2434, 2524
MaeI	CTAG	6 cut(s)	542, 1011, 1043, 1530, 1770, 2435
MaeII	ACGT	4 cut(s)	969, 1037, 1318, 2165
MaeIII	GTNAC	5 cut(s)	532, 734, 1331, 1414, 2039
MalI	GATC	9 cut(s)	224, 374, 689, 1197, 1329, 1343, 1663, 2258, 2563
MboI	GATC	9 cut(s)	222, 372, 687, 1195, 1327, 1341, 1661, 2256, 2561
MfeI	CAATTG	1 cut(s)	899
MflI	RGATCY	5 cut(s)	222, 372, 687, 1661, 2561
MhlI	GDGCHC	6 cut(s)	657, 797, 854, 1062, 1461, 1492
MlsI	TGGCCA	3 cut(s)	953, 1029, 2327
MluNI	TGGCCA	3 cut(s)	953, 1029, 2327
MlyI	GAGTC	4 cut(s)	732, 772, 983, 1153
MmeI	TCCRAC	1 cut(s)	267
Mox20I	TGGCCA	3 cut(s)	953, 1029, 2327
Mph1103I	ATGCAT	1 cut(s)	2413
MroNI	GCCGGC	1 cut(s)	497
MroXI	GAANNNNTTC	2 cut(s)	13, 1247
MscI	TGGCCA	3 cut(s)	953, 1029, 2327
MslI	CAYNNNNRTG	5 cut(s)	344, 525, 933, 1754, 2646
Msp20I	TGGCCA	3 cut(s)	953, 1029, 2327
MspA1I	CMGCKG	3 cut(s)	189, 747, 986
MspCI	CTTAAG	1 cut(s)	620
MspI	CCGG	4 cut(s)	261, 468, 498, 800
MspR9I	CCNGG	3 cut(s)	1177, 1910, 2567
MunI	CAATTG	1 cut(s)	899
Mva1269I	GAATGC	2 cut(s)	1406, 2488
MvaI	CCWGG	3 cut(s)	1177, 1910, 2567
MvnI	CGCG	1 cut(s)	1085
MwoI	GCNNNNNNNGC	5 cut(s)	292, 959, 1057, 1134, 1226
NaeI	GCCGGC	1 cut(s)	499
NdeII	GATC	9 cut(s)	222, 372, 687, 1195, 1327, 1341, 1661, 2256, 2561
NgoMIV	GCCGGC	1 cut(s)	497
NlaIV	GGNNCC	9 cut(s)	265, 655, 689, 836, 982, 1181, 1236, 2320, 2563
NmuCI	GTSAC	2 cut(s)	1414, 2039
NsiI	ATGCAT	1 cut(s)	2413
NspI	RCATGY	4 cut(s)	443, 938, 2471, 2676
PaeI	GCATGC	1 cut(s)	2471
PciI	ACATGT	1 cut(s)	2672
PcsI	WCGNNNNNNNCGW	1 cut(s)	2510
PctI	GAATGC	2 cut(s)	1406, 2488
PdiI	GCCGGC	1 cut(s)	499
PdmI	GAANNNNTTC	2 cut(s)	13, 1247
PfeI	GAWTC	8 cut(s)	1243, 1433, 1580, 1730, 1922, 1952, 2062, 2506
PleI	GAGTC	4 cut(s)	731, 772, 983, 1152
PmaCI	CACGTG	1 cut(s)	1038
PmlI	CACGTG	1 cut(s)	1038
PpsI	GAGTC	4 cut(s)	731, 772, 983, 1152
Ppu21I	YACGTR	2 cut(s)	970, 1038
PpuMI	RGGWCCY	2 cut(s)	835, 1179
PscI	ACATGT	1 cut(s)	2672
PsiI	TTATAA	1 cut(s)	1706
Psp1406I	AACGTT	1 cut(s)	2165
Psp5II	RGGWCCY	2 cut(s)	835, 1179
Psp6I	CCWGG	3 cut(s)	1175, 1908, 2565
PspCI	CACGTG	1 cut(s)	1038
PspEI	GGTNACC	1 cut(s)	1414
PspFI	CCCAGC	1 cut(s)	2423
PspGI	CCWGG	3 cut(s)	1175, 1908, 2565
PspN4I	GGNNCC	9 cut(s)	265, 655, 689, 836, 982, 1181, 1236, 2320, 2563
PspOMI	GGGCCC	1 cut(s)	653
PspPI	GGNCC	7 cut(s)	616, 653, 654, 835, 981, 1067, 1179
PspPPI	RGGWCCY	2 cut(s)	835, 1179
PsrI	GAACNNNNNNTAC	2 cut(s)	2302, 2334
PstNI	CAGNNNCTG	1 cut(s)	2302
PsuI	RGATCY	5 cut(s)	222, 372, 687, 1661, 2561
RsaI	GTAC	3 cut(s)	863, 916, 1378
RsaNI	GTAC	3 cut(s)	862, 915, 1377
RseI	CAYNNNNRTG	5 cut(s)	344, 525, 933, 1754, 2646
Sau3AI	GATC	9 cut(s)	222, 372, 687, 1195, 1327, 1341, 1661, 2256, 2561
Sau96I	GGNCC	7 cut(s)	616, 653, 654, 835, 981, 1067, 1179
ScaI	AGTACT	1 cut(s)	1378
SchI	GAGTC	4 cut(s)	732, 772, 983, 1153
ScrFI	CCNGG	3 cut(s)	1177, 1910, 2567
SduI	GDGCHC	6 cut(s)	657, 797, 854, 1062, 1461, 1492
SfaNI	GCATC	7 cut(s)	201, 248, 700, 1758, 2398, 2434, 2524
SinI	GGWCC	4 cut(s)	616, 835, 981, 1179
SmiMI	CAYNNNNRTG	5 cut(s)	344, 525, 933, 1754, 2646
SmlI	CTYRAG	5 cut(s)	323, 620, 878, 1380, 1443
SmoI	CTYRAG	5 cut(s)	323, 620, 878, 1380, 1443
SphI	GCATGC	1 cut(s)	2471
SsiI	CCGC	9 cut(s)	180, 187, 237, 747, 786, 831, 846, 984, 1085
SspI	AATATT	2 cut(s)	1288, 2148
SspMI	CTAG	6 cut(s)	542, 1011, 1043, 1530, 1770, 2435
StyD4I	CCNGG	3 cut(s)	1175, 1908, 2565
StyI	CCWWGG	3 cut(s)	330, 922, 2322
TaaI	ACNGT	6 cut(s)	595, 1262, 1567, 2045, 2179, 2476
TaiI	ACGT	4 cut(s)	972, 1040, 1321, 2168
TaqI	TCGA	4 cut(s)	354, 1198, 2259, 2509
TaqII	GACCGA	1 cut(s)	2223
TatI	WGTACW	1 cut(s)	1376
TauI	GCSGC	3 cut(s)	239, 750, 1088
TfiI	GAWTC	8 cut(s)	1243, 1433, 1580, 1730, 1922, 1952, 2062, 2506
TscAI	CASTG	7 cut(s)	945, 1053, 1144, 1245, 1543, 1590, 2050
TseFI	GTSAC	2 cut(s)	1414, 2039
TseI	GCWGC	7 cut(s)	189, 319, 380, 744, 1511, 2219, 2367
Tsp45I	GTSAC	2 cut(s)	1414, 2039
TspDTI	ATGAA	9 cut(s)	1410, 1831, 1958, 1974, 1992, 2140, 2204, 2495, 2607
TspGWI	ACGGA	2 cut(s)	190, 2646
TspRI	CASTG	7 cut(s)	945, 1053, 1144, 1245, 1543, 1590, 2050
Vha464I	CTTAAG	1 cut(s)	620
VneI	GTGCAC	2 cut(s)	850, 1457
VpaK11BI	GGWCC	4 cut(s)	616, 835, 981, 1179
XagI	CCTNNNNNAGG	1 cut(s)	209
XapI	RAATTY	3 cut(s)	609, 1208, 1479
XbaI	TCTAGA	2 cut(s)	1769, 2434
XceI	RCATGY	4 cut(s)	443, 938, 2471, 2676
XcmI	CCANNNNNNNNNTGG	4 cut(s)	337, 647, 905, 1426
XmnI	GAANNNNTTC	2 cut(s)	13, 1247
XspI	CTAG	6 cut(s)	542, 1011, 1043, 1530, 1770, 2435
ZrmI	AGTACT	1 cut(s)	1378
Zsp2I	ATGCAT	1 cut(s)	2413

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.