RchiOBHm_Chr2g0139371

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0001993
Physical Location & Seq
Forward (+)
56997439 .. 57000170
2732 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ50994

Sequence Viewer

Length: 1302 bp
ATGGCCTCACAAGACTACTCTCCCCCAACTCCATCTTTTGCAACAAATAAAAACAAGTTCTTCTCCGGCTTCACCAGAAGCACATCAACCAAAGAACCATCCTTCTCACAATTTCCTTATACACCGCCTCGCCATAACACCAATGACGTCTCTCCTTCCTTCTCCCAAACCGAAAGCCTCCACGCCTCCCCAACCTCCTCCCCTCAGTTCATCCCTCTCAAACACCCCGACCTCCTCACCGCCTACCGTTGCATCTCCTCCGTCCTGAAAAAGGACGGCCGGATCTTGTCCATCACCGCCTCCAGTGGCCTAGTTTACTCCGGCTCAGATACCAATGTCATTAGGGTTTGGAAGCTACCCGAGTTCACAGAATGTGGGCAGCTCAAGACCAAAGCTTGCATGGTGGTGGCACTAGAGGTGTCTCATGATAGGGTTTATGCTGCTTATGGTGATGGGAAGGTGAGAATATGGCAGAGAACATGGGATGGAGGGTTGAAGCATGAGAGGTTGGCTACGATTCCGAAGATCGGAAGTTATGTCCGGAGTTTCTACATTGCCGGGAAAGATAAGACGGTTAAGCATATGGGTGCCATAACATCACTAGCCATCAATGTAGCAGAGGACATCCTCTACTCAGCTTCCATTGACAAAACAGTGAAAGTATGGCGAATTTCAGACCTCAAATGCATCGAGACAATCCAAGCCCACGCCGAGCCAATCAATGCCATCATTGCCGCGGACGATGGAATCCTCTACACGGCCTCCGACGATGCAACTGTTCGAGTCTGGCGCCGCAACTTTTGTCGTGGCGACCAGCTTCCACATTCACTCACCGTGACTCTACCGGCCAAGTACTCCCCCGTCAAGACCCTAACCCTAACAGCGGATGGTGCAATCTTGTACGGGGGTTGCACTGACGGGTACATACACTTTTGGCTTAGGGGTTGGTTCTCAGGCCAGGTGCAGTACGGCGGGGCACTCCAGGGCCACACCCATGCAGTTATGTGCTTGGCCAGCGTGGCGAACTACGTGGTCAGTGGGTCAGCTGACTCAACGAGTAGGATTTGGTCTAAGGACCCTGATGGTCTGCATACTTGTCTAGCAGTCCTTGTGGGTCACAGAGGGCCAATCAGGTGTGTGACAGCATTTCTGGGAAGGCTGGGAGAAGAGACTGAGGAGGGGTGCACAATCTGTACAGGGAGTCTTGATGGTGTTCTCAAAGTGTGGCGTGTGACATCCAAAAGTAATAGTGGTAATAGTGGGTGTTTAGCACAGGGTGGGAGTGAGTATTTCGAGCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

433

Amino Acids

47.21

Weight (kDa)

8.62

Isoelectric Point (pI)

36.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_EML PF23409 108 - 302 1.4e-06 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR36-Utp21_2nd PF25168 181 - 262 3.2e-06 WDR36/Utp21 second beta-propeller domain
WD40_Gbeta PF25391 191 - 356 8.1e-12 G protein beta WD-40 repeat protein
Beta-prop_THOC3 PF25174 192 - 412 3.4e-19 THOC3 beta-propeller domain
Beta-prop_WDR3_2nd PF25172 192 - 265 8.1e-08 WDR3 second beta-propeller domain
Beta-prop_WDR5 PF25175 193 - 265 2e-14 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 193 - 264 3.5e-12 WDR3 first beta-propeller domain
WDR55 PF24796 193 - 418 2.2e-10 WDR55
WD40_CDC20-Fz PF24807 195 - 356 5.6e-07 CDC20/Fizzy WD40 domain
WD40_Prp19 PF24814 196 - 312 1.5e-11 Prp19 WD40 domain
Beta-prop_EML_2 PF23414 200 - 356 1.2e-06 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_1st PF25173 279 - 414 3.1e-10 WDR3 first beta-propeller domain
Beta-prop_TEP1_2nd PF25047 298 - 413 3.5e-07 TEP-1 second beta-propeller
Beta-prop_WDR5 PF25175 325 - 413 9.5e-10 WDR5 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 150
AccB1I GGYRCC 2 cut(s) 587, 789
AccII CGCG 1 cut(s) 737
AccIII TCCGGA 1 cut(s) 540
AciI CCGC 8 cut(s) 125, 240, 297, 735, 737, 793, 884, 972
AclWI GGATC 1 cut(s) 290
AcoI YGGCCR 3 cut(s) 277, 846, 1011
AcsI RAATTY 1 cut(s) 669
AcyI GRCGYC 2 cut(s) 147, 790
AdeI CACNNNGTG 1 cut(s) 1277
AfaI GTAC 5 cut(s) 854, 902, 923, 968, 1195
AfiI CCNNNNNNNGG 4 cut(s) 271, 527, 757, 883
AgsI TTSAA 1 cut(s) 496
AjnI CCWGG 2 cut(s) 957, 981
AluBI AGCT 7 cut(s) 355, 382, 395, 638, 817, 1046, 1297
AluI AGCT 7 cut(s) 355, 382, 395, 638, 817, 1046, 1297
Alw21I GWGCWC 1 cut(s) 1187
Alw26I GTCTC 4 cut(s) 154, 426, 686, 1163
Alw44I GTGCAC 1 cut(s) 1183
AlwI GGATC 1 cut(s) 290
Ama87I CYCGRG 1 cut(s) 359
Aor13HI TCCGGA 1 cut(s) 540
AoxI GGCC 9 cut(s) 3, 277, 307, 759, 846, 955, 985, 1011, 1124
ApaLI GTGCAC 1 cut(s) 1183
ApeKI GCWGC 2 cut(s) 379, 440
ApoI RAATTY 1 cut(s) 669
AspLEI GCGC 1 cut(s) 792
AspS9I GGNCC 3 cut(s) 985, 1075, 1124
AsuC2I CCSGG 1 cut(s) 559
AsuHPI GGTGA 6 cut(s) 64, 229, 286, 461, 472, 823
AvaI CYCGRG 1 cut(s) 359
AvaII GGWCC 1 cut(s) 1075
BaeGI GKGCMC 2 cut(s) 979, 1187
BaeI ACNNNNGTAYC 2 cut(s) 321, 354
BalI TGGCCA 1 cut(s) 1013
BanI GGYRCC 2 cut(s) 587, 789
Bbv12I GWGCWC 1 cut(s) 1187
BbvI GCAGC 2 cut(s) 391, 427
BceAI ACGGC 3 cut(s) 292, 774, 985
BciT130I CCWGG 2 cut(s) 959, 983
BcnI CCSGG 1 cut(s) 559
BcoDI GTCTC 4 cut(s) 154, 426, 686, 1163
BfaI CTAG 4 cut(s) 311, 413, 602, 1100
BfmI CTRYAG 1 cut(s) 1298
BfoI RGCGCY 1 cut(s) 793
BglI GCCNNNNNGGC 1 cut(s) 1019
BisI GCNGC 4 cut(s) 380, 441, 735, 793
BlsI GCNGC 4 cut(s) 381, 442, 736, 794
BmcAI AGTACT 1 cut(s) 854
Bme1390I CCNGG 3 cut(s) 559, 959, 983
Bme18I GGWCC 1 cut(s) 1075
BmeT110I CYCGRG 1 cut(s) 359
BmgT120I GGNCC 3 cut(s) 985, 1075, 1124
BmiI GGNNCC 3 cut(s) 589, 791, 1077
BmrFI CCNGG 3 cut(s) 559, 959, 983
BmsI GCATC 3 cut(s) 261, 696, 760
BpmI CTGGAG 2 cut(s) 286, 965
Bpu10I CCTNAGC 1 cut(s) 938
BpuEI CTTGAG 1 cut(s) 368
BpuMI CCSGG 1 cut(s) 559
BsaAI YACGTR 1 cut(s) 1030
BsaHI GRCGYC 2 cut(s) 147, 790
BsaJI CCNNGG 2 cut(s) 735, 982
BsaWI WCCGGW 1 cut(s) 540
BsaXI ACNNNNNCTCC 2 cut(s) 746, 776
Bsc4I CCNNNNNNNGG 4 cut(s) 271, 527, 757, 883
Bse118I RCCGGY 1 cut(s) 844
Bse1I ACTGG 1 cut(s) 303
Bse3DI GCAATG 2 cut(s) 552, 729
BseAI TCCGGA 1 cut(s) 540
BseBI CCWGG 2 cut(s) 959, 983
BseDI CCNNGG 2 cut(s) 735, 982
BseGI GGATG 6 cut(s) 98, 210, 490, 624, 892, 1235
BseLI CCNNNNNNNGG 4 cut(s) 271, 527, 757, 883
BseMI GCAATG 2 cut(s) 552, 729
BseMII CTCAG 5 cut(s) 218, 339, 648, 966, 1164
BseNI ACTGG 1 cut(s) 303
BseRI GAGGAG 4 cut(s) 187, 224, 247, 1190
BseSI GKGCMC 2 cut(s) 979, 1187
BseX3I CGGCCG 1 cut(s) 277
BseXI GCAGC 2 cut(s) 391, 427
BseYI CCCAGC 1 cut(s) 1159
BsgI GTGCAG 1 cut(s) 983
Bsh1236I CGCG 1 cut(s) 737
Bsh1285I CGRYCG 1 cut(s) 280
BshFI GGCC 9 cut(s) 5, 279, 309, 761, 848, 957, 987, 1013, 1126
BshNI GGYRCC 2 cut(s) 587, 789
BsiEI CGRYCG 1 cut(s) 280
BsiHKAI GWGCWC 1 cut(s) 1187
BsiHKCI CYCGRG 1 cut(s) 359
BsiSI CCGG 6 cut(s) 66, 280, 321, 541, 558, 845
BslI CCNNNNNNNGG 4 cut(s) 271, 527, 757, 883
BsmAI GTCTC 4 cut(s) 154, 426, 686, 1163
BsmBI CGTCTC 1 cut(s) 154
BsnI GGCC 9 cut(s) 5, 279, 309, 761, 848, 957, 987, 1013, 1126
BsoBI CYCGRG 1 cut(s) 359
Bsp1286I GDGCHC 2 cut(s) 979, 1187
Bsp13I TCCGGA 1 cut(s) 540
Bsp1407I TGTACA 1 cut(s) 1193
Bsp143I GATC 2 cut(s) 282, 525
BspACI CCGC 8 cut(s) 125, 240, 297, 735, 737, 793, 884, 972
BspANI GGCC 9 cut(s) 5, 279, 309, 761, 848, 957, 987, 1013, 1126
BspCNI CTCAG 5 cut(s) 217, 338, 647, 965, 1165
BspEI TCCGGA 1 cut(s) 540
BspFNI CGCG 1 cut(s) 737
BspHI TCATGA 1 cut(s) 424
BspLI GGNNCC 3 cut(s) 589, 791, 1077
BspPI GGATC 1 cut(s) 290
BspT107I GGYRCC 2 cut(s) 587, 789
BsrDI GCAATG 2 cut(s) 552, 729
BsrFI RCCGGY 1 cut(s) 844
BsrGI TGTACA 1 cut(s) 1193
BsrI ACTGG 1 cut(s) 303
BssAI RCCGGY 1 cut(s) 844
BssECI CCNNGG 2 cut(s) 735, 982
BssMI GATC 2 cut(s) 282, 525
BssNI GRCGYC 2 cut(s) 147, 790
Bst2UI CCWGG 2 cut(s) 959, 983
Bst4CI ACNGT 5 cut(s) 248, 574, 655, 778, 835
Bst6I CTCTTC 1 cut(s) 1161
BstACI GRCGYC 2 cut(s) 147, 790
BstAUI TGTACA 1 cut(s) 1193
BstBAI YACGTR 1 cut(s) 1030
BstC8I GCNNGC 2 cut(s) 397, 1015
BstDEI CTNAG 7 cut(s) 204, 325, 634, 938, 952, 1071, 1173
BstDSI CCRYGG 1 cut(s) 735
BstENI CCTNNNNNAGG 1 cut(s) 269
BstF5I GGATG 6 cut(s) 98, 210, 490, 624, 892, 1235
BstFNI CGCG 1 cut(s) 737
BstH2I RGCGCY 1 cut(s) 793
BstHHI GCGC 1 cut(s) 792
BstKTI GATC 2 cut(s) 285, 528
BstMAI GTCTC 4 cut(s) 154, 426, 686, 1163
BstMBI GATC 2 cut(s) 282, 525
BstMCI CGRYCG 1 cut(s) 280
BstMWI GCNNNNNNNGC 4 cut(s) 731, 890, 1014, 1019
BstNI CCWGG 2 cut(s) 959, 983
BstSCI CCNGG 3 cut(s) 557, 957, 981
BstSFI CTRYAG 1 cut(s) 1298
BstSLI GKGCMC 2 cut(s) 979, 1187
BstUI CGCG 1 cut(s) 737
BstV1I GCAGC 2 cut(s) 391, 427
BstX2I RGATCY 1 cut(s) 282
BstYI RGATCY 1 cut(s) 282
BstZI CGGCCG 1 cut(s) 277
BsuRI GGCC 9 cut(s) 5, 279, 309, 761, 848, 957, 987, 1013, 1126
BtgI CCRYGG 1 cut(s) 735
BtsCI GGATG 6 cut(s) 98, 210, 490, 624, 892, 1235
BtsIMutI CAGTG 4 cut(s) 310, 660, 912, 1042
Cac8I GCNNGC 2 cut(s) 397, 1015
CciI TCATGA 1 cut(s) 424
CfoI GCGC 1 cut(s) 792
Cfr10I RCCGGY 1 cut(s) 844
Cfr13I GGNCC 3 cut(s) 985, 1075, 1124
Cfr42I CCGCGG 1 cut(s) 738
Csp6I GTAC 5 cut(s) 853, 901, 922, 967, 1194
CviAII CATG 5 cut(s) 400, 425, 480, 500, 995
CviQI GTAC 5 cut(s) 853, 901, 922, 967, 1194
DdeI CTNAG 7 cut(s) 204, 325, 634, 938, 952, 1071, 1173
DinI GGCGCC 1 cut(s) 791
DpnI GATC 2 cut(s) 284, 527
DpnII GATC 2 cut(s) 282, 525
DraIII CACNNNGTG 1 cut(s) 1277
EaeI YGGCCR 3 cut(s) 277, 846, 1011
EagI CGGCCG 1 cut(s) 277
Eam1104I CTCTTC 1 cut(s) 1161
EarI CTCTTC 1 cut(s) 1161
EclXI CGGCCG 1 cut(s) 277
Eco47I GGWCC 1 cut(s) 1075
Eco52I CGGCCG 1 cut(s) 277
Eco88I CYCGRG 1 cut(s) 359
EcoNI CCTNNNNNAGG 1 cut(s) 269
EcoO109I RGGNCCY 1 cut(s) 1075
EcoRII CCWGG 2 cut(s) 957, 981
EcoT22I ATGCAT 1 cut(s) 689
EgeI GGCGCC 1 cut(s) 791
EheI GGCGCC 1 cut(s) 791
Esp3I CGTCTC 1 cut(s) 154
FaeI CATG 5 cut(s) 403, 428, 483, 503, 998
FatI CATG 5 cut(s) 399, 424, 479, 499, 994
FauI CCCGC 1 cut(s) 965
FauNDI CATATG 1 cut(s) 582
Fnu4HI GCNGC 4 cut(s) 380, 441, 735, 793
FokI GGATG 6 cut(s) 85, 197, 497, 611, 899, 1222
Fsp4HI GCNGC 4 cut(s) 380, 441, 735, 793
FspBI CTAG 4 cut(s) 311, 413, 602, 1100
GlaI GCGC 1 cut(s) 791
GluI GCNGC 4 cut(s) 380, 441, 735, 793
GsaI CCCAGC 1 cut(s) 1163
GsuI CTGGAG 2 cut(s) 286, 965
HaeII RGCGCY 1 cut(s) 793
HaeIII GGCC 9 cut(s) 5, 279, 309, 761, 848, 957, 987, 1013, 1126
HapII CCGG 6 cut(s) 66, 280, 321, 541, 558, 845
HhaI GCGC 1 cut(s) 792
Hin1I GRCGYC 2 cut(s) 147, 790
Hin1II CATG 5 cut(s) 403, 428, 483, 503, 998
Hin6I GCGC 1 cut(s) 790
HinP1I GCGC 1 cut(s) 790
HindIII AAGCTT 1 cut(s) 393
HinfI GANTC 6 cut(s) 517, 747, 783, 838, 1049, 1201
HpaII CCGG 6 cut(s) 66, 280, 321, 541, 558, 845
HphI GGTGA 6 cut(s) 64, 229, 286, 461, 472, 823
Hpy166II GTNNAC 3 cut(s) 316, 366, 1185
Hpy188I TCNGA 5 cut(s) 328, 522, 530, 676, 766
Hpy188III TCNNGA 7 cut(s) 265, 385, 425, 541, 691, 865, 1205
Hpy8I GTNNAC 3 cut(s) 316, 366, 1185
Hpy99I CGWCG 1 cut(s) 770
HpyAV CCTTC 5 cut(s) 112, 165, 169, 451, 1149
HpyCH4III ACNGT 5 cut(s) 248, 574, 655, 778, 835
HpyCH4IV ACGT 2 cut(s) 147, 1029
HpyF10VI GCNNNNNNNGC 4 cut(s) 731, 890, 1014, 1019
HpyF3I CTNAG 7 cut(s) 204, 325, 634, 938, 952, 1071, 1173
HpySE526I ACGT 2 cut(s) 147, 1029
Hsp92I GRCGYC 2 cut(s) 147, 790
Hsp92II CATG 5 cut(s) 403, 428, 483, 503, 998
HspAI GCGC 1 cut(s) 790
KasI GGCGCC 1 cut(s) 789
Kpn2I TCCGGA 1 cut(s) 540
KspI CCGCGG 1 cut(s) 738
Kzo9I GATC 2 cut(s) 282, 525
Lsp1109I GCAGC 2 cut(s) 391, 427
LweI GCATC 3 cut(s) 261, 696, 760
MaeI CTAG 4 cut(s) 311, 413, 602, 1100
MaeII ACGT 2 cut(s) 147, 1029
MaeIII GTNAC 4 cut(s) 835, 1115, 1138, 1231
MalI GATC 2 cut(s) 284, 527
MboI GATC 2 cut(s) 282, 525
MboII GAAGA 3 cut(s) 52, 535, 1178
MflI RGATCY 1 cut(s) 282
MhlI GDGCHC 2 cut(s) 979, 1187
MlsI TGGCCA 1 cut(s) 1013
MluCI AATT 2 cut(s) 110, 669
MluNI TGGCCA 1 cut(s) 1013
Mly113I GGCGCC 1 cut(s) 790
MlyI GAGTC 4 cut(s) 792, 832, 1043, 1210
MmeI TCCRAC 1 cut(s) 789
Mox20I TGGCCA 1 cut(s) 1013
Mph1103I ATGCAT 1 cut(s) 689
MroI TCCGGA 1 cut(s) 540
MscI TGGCCA 1 cut(s) 1013
MseI TTAA 1 cut(s) 576
MslI CAYNNNNRTG 3 cut(s) 404, 585, 993
Msp20I TGGCCA 1 cut(s) 1013
MspA1I CMGCKG 3 cut(s) 737, 884, 1046
MspI CCGG 6 cut(s) 66, 280, 321, 541, 558, 845
MspR9I CCNGG 3 cut(s) 559, 959, 983
MvaI CCWGG 2 cut(s) 959, 983
MvnI CGCG 1 cut(s) 737
MwoI GCNNNNNNNGC 4 cut(s) 731, 890, 1014, 1019
NarI GGCGCC 1 cut(s) 790
NciI CCSGG 1 cut(s) 559
NdeI CATATG 1 cut(s) 582
NdeII GATC 2 cut(s) 282, 525
NlaIII CATG 5 cut(s) 403, 428, 483, 503, 998
NlaIV GGNNCC 3 cut(s) 589, 791, 1077
NmeAIII GCCGAG 1 cut(s) 736
NmuCI GTSAC 4 cut(s) 835, 1115, 1138, 1231
NsiI ATGCAT 1 cut(s) 689
PagI TCATGA 1 cut(s) 424
PfeI GAWTC 2 cut(s) 517, 747
PkrI GCNGC 4 cut(s) 381, 442, 736, 794
PleI GAGTC 4 cut(s) 791, 832, 1043, 1209
PluTI GGCGCC 1 cut(s) 793
PpsI GAGTC 4 cut(s) 791, 832, 1043, 1209
Ppu21I YACGTR 1 cut(s) 1030
PpuMI RGGWCCY 1 cut(s) 1075
Psp5II RGGWCCY 1 cut(s) 1075
Psp6I CCWGG 2 cut(s) 957, 981
PspFI CCCAGC 1 cut(s) 1159
PspGI CCWGG 2 cut(s) 957, 981
PspN4I GGNNCC 3 cut(s) 589, 791, 1077
PspPI GGNCC 3 cut(s) 985, 1075, 1124
PspPPI RGGWCCY 1 cut(s) 1075
PsuI RGATCY 1 cut(s) 282
PvuII CAGCTG 1 cut(s) 1046
RsaI GTAC 5 cut(s) 854, 902, 923, 968, 1195
RsaNI GTAC 5 cut(s) 853, 901, 922, 967, 1194
RseI CAYNNNNRTG 3 cut(s) 404, 585, 993
SacII CCGCGG 1 cut(s) 738
SaqAI TTAA 1 cut(s) 576
SatI GCNGC 4 cut(s) 380, 441, 735, 793
Sau3AI GATC 2 cut(s) 282, 525
Sau96I GGNCC 3 cut(s) 985, 1075, 1124
ScaI AGTACT 1 cut(s) 854
SchI GAGTC 4 cut(s) 792, 832, 1043, 1210
ScrFI CCNGG 3 cut(s) 559, 959, 983
SduI GDGCHC 2 cut(s) 979, 1187
SfaNI GCATC 3 cut(s) 261, 696, 760
SfcI CTRYAG 1 cut(s) 1298
SfoI GGCGCC 1 cut(s) 791
Sfr303I CCGCGG 1 cut(s) 738
SgrBI CCGCGG 1 cut(s) 738
SinI GGWCC 1 cut(s) 1075
SmiMI CAYNNNNRTG 3 cut(s) 404, 585, 993
SmlI CTYRAG 1 cut(s) 383
SmoI CTYRAG 1 cut(s) 383
Sse9I AATT 2 cut(s) 110, 669
SsiI CCGC 8 cut(s) 125, 240, 297, 735, 737, 793, 884, 972
SspDI GGCGCC 1 cut(s) 789
SspMI CTAG 4 cut(s) 311, 413, 602, 1100
StyD4I CCNGG 3 cut(s) 557, 957, 981
TaaI ACNGT 5 cut(s) 248, 574, 655, 778, 835
TaiI ACGT 2 cut(s) 150, 1032
TaqI TCGA 3 cut(s) 690, 781, 1293
TasI AATT 2 cut(s) 110, 669
TatI WGTACW 2 cut(s) 852, 1193
TauI GCSGC 2 cut(s) 737, 795
TfiI GAWTC 2 cut(s) 517, 747
Tru1I TTAA 1 cut(s) 576
Tru9I TTAA 1 cut(s) 576
TscAI CASTG 4 cut(s) 310, 660, 919, 1042
TseFI GTSAC 4 cut(s) 835, 1115, 1138, 1231
TseI GCWGC 2 cut(s) 379, 440
Tsp45I GTSAC 4 cut(s) 835, 1115, 1138, 1231
TspDTI ATGAA 1 cut(s) 199
TspGWI ACGGA 1 cut(s) 250
TspRI CASTG 4 cut(s) 310, 660, 919, 1042
VneI GTGCAC 1 cut(s) 1183
VpaK11BI GGWCC 1 cut(s) 1075
XagI CCTNNNNNAGG 1 cut(s) 269
XapI RAATTY 1 cut(s) 669
XcmI CCANNNNNNNNNTGG 1 cut(s) 397
XspI CTAG 4 cut(s) 311, 413, 602, 1100
ZraI GACGTC 1 cut(s) 148
ZrmI AGTACT 1 cut(s) 854
Zsp2I ATGCAT 1 cut(s) 689
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.