Prupe.3G192400_v2.0.a1

Vacuolar cation proton exchanger

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
20457157 .. 20462817
5661 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G192400.1

Sequence Viewer

Length: 1413 bp
ATGGATACTGATAACCATTTTTACAACAATGATAACAACAACAACAACCACAACAATGGTGCAGCCACAGTAAAAATAGATTCCCATGTTGAGATTTTGGTTCCACAGATGGGATCAATGGAGCCCAAACCAGCGTTTGAGTATGAGGACCAGAGCCTAGTTGGTCCTGACAAACATTCCTTGGATGAGGCTCCCCTCAGATCTCTATATTCTGGTGGTCCAGGAGACTGTTCTCCCCAGGCCATGGGGAATACGGTGGTTGATAGCATCAAGATTGTAGTTTTCTCTGCCAAAATTAACTTGCTCATGCCTTTTGGCCCTTTAGCGATCGTGGTCGATAAATTTTCCGGCCATCGTGGTTGGGTCTTCCTTTTAAGCTTGTTGGGCATCATACCTTTGGCTGAGCGATTAGGATATGTAACAGAGCAGCTGGCTTGCTATACTGGACCAACAGTTGGAGGGCTTTTAAATGCCACCTTTGGAAATGCAACAGAACTGATAATATCAATTTATGCTTTGAGACGTGGCATGATTCGTGTTGTTCAACAGTCTTTACTAGGCTCAATTCTGTCAAACATGTTGCTGGTGCTTGGATGTGCTTTCTTTGCTGGTGGACTTGTGTTTTCAAAGAGGGAACAAGTTTTCAACAAGGCAACTGCTGCAGTGAGCTCGGGATTGCTATTGATGGCGGTCATGGGTCTGCTCTTTCCAGCTGTACTGCACTCTACTCGCACAGAATTGCACTTCGGGAAATCTGAATTAGCCCTTTCAAGATTTACCAGCTGCATTATGCTTGTAGCATATGCTTCCTATCTGTTCTTTCAGTTGAAGAGCCAGCAGAATTTATATGTTCCAGTTGATCAGGCAGAGAATCACGCCGAAGAAATTTCAGATGATGAAGAGGAACCTGAGATCTCTAAGTGGGAATCCATAATATGGCTATCTATTCTAACTGCATGGATTTCAGTCCTCTCAGAATATTTAGTTAATGCGATAGAGGGTGCATCTGTTGCAATGAACATTCCGGTTGCATTTATTAGTGTTATTCTGCTGCCAATCGTTGGGAACGCAGCAGAGCATGCAGGTGCTGTTATGTTTGCCATGAAAGACAAGCTTGATATAACTTTGGGAGTGGCGATAGGCTCATCAACCCAGATATCTATGTTTGGAATTCCATTTTGTGTGGTGGTTGGGTGGGTGATGGGGTGCCCTATGGACTTAGATTTCCAACTGTTTGAGACAGCCACACTTTTCATAACTGTTTTAGTAGTAGCCTTCATGCTACAGGAGGGAACTTCTAATTACTTTAAAGGACTAATGCTCATTCTCTGCTACATTATTGTCGCGGCAAGCTTCTTTGTACATAGAGATCCTAAAGCAATACGGGATAAGCCCCAGAAACCAAAGCAGTAA

Protein Analysis

471

Amino Acids

51.31

Weight (kDa)

5.16

Isoelectric Point (pI)

35.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1073
Acc36I ACCTGC 1 cut(s) 1073
AccB1I GGYRCC 1 cut(s) 1206
AccB7I CCANNNNNTGG 4 cut(s) 244, 455, 936, 1061
AccII CGCG 1 cut(s) 1346
AciI CCGC 2 cut(s) 689, 1346
AclWI GGATC 2 cut(s) 121, 1364
AcoI YGGCCR 1 cut(s) 349
AcsI RAATTY 4 cut(s) 341, 841, 885, 1170
AfaI GTAC 2 cut(s) 717, 1362
AfiI CCNNNNNNNGG 5 cut(s) 110, 244, 455, 936, 1061
AflIII ACRYGT 1 cut(s) 576
AgsI TTSAA 5 cut(s) 545, 627, 646, 771, 829
AjiI CACGTC 1 cut(s) 524
AjnI CCWGG 2 cut(s) 220, 237
AluBI AGCT 7 cut(s) 378, 430, 669, 713, 783, 1114, 1353
AluI AGCT 7 cut(s) 378, 430, 669, 713, 783, 1114, 1353
Alw21I GWGCWC 1 cut(s) 671
Alw26I GTCTC 3 cut(s) 219, 514, 1232
AlwI GGATC 2 cut(s) 121, 1364
AlwNI CAGNNNCTG 1 cut(s) 1088
Ama87I CYCGRG 1 cut(s) 670
AoxI GGCC 3 cut(s) 240, 316, 349
ApeKI GCWGC 6 cut(s) 62, 427, 659, 783, 1051, 1070
ApoI RAATTY 4 cut(s) 341, 841, 885, 1170
AspS9I GGNCC 5 cut(s) 148, 164, 218, 317, 446
AsuHPI GGTGA 1 cut(s) 1210
AvaI CYCGRG 1 cut(s) 670
AvaII GGWCC 4 cut(s) 148, 164, 218, 446
BaeGI GKGCMC 1 cut(s) 1211
BanI GGYRCC 1 cut(s) 1206
BanII GRGCYC 2 cut(s) 126, 671
BbsI GAAGAC 1 cut(s) 358
Bbv12I GWGCWC 1 cut(s) 671
BbvI GCAGC 6 cut(s) 74, 439, 646, 770, 1038, 1082
BccI CCATC 4 cut(s) 103, 360, 679, 1195
BcgI CGANNNNNNTGC 4 cut(s) 651, 685, 710, 744
BciT130I CCWGG 2 cut(s) 222, 239
BclI TGATCA 1 cut(s) 859
BcoDI GTCTC 3 cut(s) 219, 514, 1232
BfaI CTAG 2 cut(s) 158, 557
BfmI CTRYAG 2 cut(s) 660, 1283
BfuAI ACCTGC 1 cut(s) 1073
BglII AGATCT 2 cut(s) 200, 912
BisI GCNGC 7 cut(s) 63, 428, 660, 784, 1052, 1071, 1347
BlpI GCTNAGC 1 cut(s) 402
BlsI GCNGC 7 cut(s) 64, 429, 661, 785, 1053, 1072, 1348
Bme1390I CCNGG 2 cut(s) 222, 239
Bme18I GGWCC 4 cut(s) 148, 164, 218, 446
BmeT110I CYCGRG 1 cut(s) 670
BmgBI CACGTC 1 cut(s) 524
BmgT120I GGNCC 5 cut(s) 148, 164, 218, 317, 446
BmiI GGNNCC 5 cut(s) 102, 123, 192, 906, 1208
BmrFI CCNGG 2 cut(s) 222, 239
BmsI GCATC 3 cut(s) 276, 396, 1013
BpiI GAAGAC 1 cut(s) 358
Bpu1102I GCTNAGC 1 cut(s) 402
BsaJI CCNNGG 3 cut(s) 180, 237, 243
BsaWI WCCGGW 1 cut(s) 1024
Bsc4I CCNNNNNNNGG 5 cut(s) 110, 244, 455, 936, 1061
Bse1I ACTGG 2 cut(s) 448, 854
Bse3DI GCAATG 1 cut(s) 1020
BseBI CCWGG 2 cut(s) 222, 239
BseDI CCNNGG 3 cut(s) 180, 237, 243
BseGI GGATG 2 cut(s) 190, 599
BseLI CCNNNNNNNGG 5 cut(s) 110, 244, 455, 936, 1061
BseMI GCAATG 1 cut(s) 1020
BseMII CTCAG 4 cut(s) 211, 393, 900, 987
BseNI ACTGG 2 cut(s) 448, 854
BseSI GKGCMC 1 cut(s) 1211
BseXI GCAGC 6 cut(s) 74, 439, 646, 770, 1038, 1082
BsgI GTGCAG 2 cut(s) 81, 704
Bsh1236I CGCG 1 cut(s) 1346
Bsh1285I CGRYCG 1 cut(s) 330
BshFI GGCC 3 cut(s) 242, 318, 351
BshNI GGYRCC 1 cut(s) 1206
BsiEI CGRYCG 1 cut(s) 330
BsiHKAI GWGCWC 1 cut(s) 671
BsiHKCI CYCGRG 1 cut(s) 670
BsiSI CCGG 2 cut(s) 348, 1025
BslI CCNNNNNNNGG 5 cut(s) 110, 244, 455, 936, 1061
BsmAI GTCTC 3 cut(s) 219, 514, 1232
BsmBI CGTCTC 1 cut(s) 514
BsnI GGCC 3 cut(s) 242, 318, 351
BsoBI CYCGRG 1 cut(s) 670
Bsp1286I GDGCHC 3 cut(s) 126, 671, 1211
Bsp1407I TGTACA 1 cut(s) 1360
Bsp143I GATC 6 cut(s) 113, 200, 327, 859, 912, 1369
Bsp1720I GCTNAGC 1 cut(s) 402
Bsp19I CCATGG 1 cut(s) 243
BspACI CCGC 2 cut(s) 689, 1346
BspANI GGCC 3 cut(s) 242, 318, 351
BspCNI CTCAG 4 cut(s) 210, 394, 901, 986
BspFNI CGCG 1 cut(s) 1346
BspLI GGNNCC 5 cut(s) 102, 123, 192, 906, 1208
BspMAI CTGCAG 1 cut(s) 664
BspMI ACCTGC 1 cut(s) 1073
BspPI GGATC 2 cut(s) 121, 1364
BspQI GCTCTTC 1 cut(s) 824
BspT107I GGYRCC 1 cut(s) 1206
BsrDI GCAATG 1 cut(s) 1020
BsrGI TGTACA 1 cut(s) 1360
BsrI ACTGG 2 cut(s) 448, 854
BssECI CCNNGG 3 cut(s) 180, 237, 243
BssMI GATC 6 cut(s) 113, 200, 327, 859, 912, 1369
BssT1I CCWWGG 2 cut(s) 180, 243
Bst2UI CCWGG 2 cut(s) 222, 239
Bst4CI ACNGT 7 cut(s) 70, 230, 256, 454, 549, 1233, 1261
Bst6I CTCTTC 2 cut(s) 824, 894
BstAPI GCANNNNNTGC 3 cut(s) 659, 1010, 1079
BstAUI TGTACA 1 cut(s) 1360
BstC8I GCNNGC 5 cut(s) 432, 436, 836, 1080, 1351
BstDEI CTNAG 6 cut(s) 197, 402, 909, 918, 973, 1219
BstDSI CCRYGG 1 cut(s) 243
BstF5I GGATG 2 cut(s) 190, 599
BstFNI CGCG 1 cut(s) 1346
BstKTI GATC 6 cut(s) 116, 203, 330, 862, 915, 1372
BstMAI GTCTC 3 cut(s) 219, 514, 1232
BstMBI GATC 6 cut(s) 113, 200, 327, 859, 912, 1369
BstMCI CGRYCG 1 cut(s) 330
BstMWI GCNNNNNNNGC 5 cut(s) 384, 605, 659, 1010, 1079
BstNI CCWGG 2 cut(s) 222, 239
BstNSI RCATGY 2 cut(s) 580, 1082
BstSCI CCNGG 2 cut(s) 220, 237
BstSFI CTRYAG 2 cut(s) 660, 1283
BstSLI GKGCMC 1 cut(s) 1211
BstUI CGCG 1 cut(s) 1346
BstV1I GCAGC 6 cut(s) 74, 439, 646, 770, 1038, 1082
BstV2I GAAGAC 1 cut(s) 358
BstX2I RGATCY 3 cut(s) 200, 912, 1369
BstXI CCANNNNNNTGG 1 cut(s) 56
BstYI RGATCY 3 cut(s) 200, 912, 1369
BsuRI GGCC 3 cut(s) 242, 318, 351
BtgI CCRYGG 1 cut(s) 243
BtrI CACGTC 1 cut(s) 524
BtsCI GGATG 2 cut(s) 190, 599
BtsI GCAGTG 1 cut(s) 669
BtsIMutI CAGTG 1 cut(s) 669
BveI ACCTGC 1 cut(s) 1073
Cac8I GCNNGC 5 cut(s) 432, 436, 836, 1080, 1351
CaiI CAGNNNCTG 1 cut(s) 1088
Cfr13I GGNCC 5 cut(s) 148, 164, 218, 317, 446
Csp6I GTAC 2 cut(s) 716, 1361
CviQI GTAC 2 cut(s) 716, 1361
DdeI CTNAG 6 cut(s) 197, 402, 909, 918, 973, 1219
DpnI GATC 6 cut(s) 115, 202, 329, 861, 914, 1371
DpnII GATC 6 cut(s) 113, 200, 327, 859, 912, 1369
DraI TTTAAA 2 cut(s) 468, 1309
EaeI YGGCCR 1 cut(s) 349
Eam1104I CTCTTC 2 cut(s) 824, 894
EarI CTCTTC 2 cut(s) 824, 894
Ecl136II GAGCTC 1 cut(s) 669
Eco130I CCWWGG 2 cut(s) 180, 243
Eco24I GRGCYC 2 cut(s) 126, 671
Eco32I GATATC 1 cut(s) 1158
Eco47I GGWCC 4 cut(s) 148, 164, 218, 446
Eco53kI GAGCTC 1 cut(s) 669
Eco88I CYCGRG 1 cut(s) 670
EcoICRI GAGCTC 1 cut(s) 669
EcoRI GAATTC 1 cut(s) 1170
EcoRII CCWGG 2 cut(s) 220, 237
EcoRV GATATC 1 cut(s) 1158
EcoT14I CCWWGG 2 cut(s) 180, 243
EcoT38I GRGCYC 2 cut(s) 126, 671
ErhI CCWWGG 2 cut(s) 180, 243
Esp3I CGTCTC 1 cut(s) 514
FalI AAGNNNNNCTT 2 cut(s) 1098, 1130
FauNDI CATATG 1 cut(s) 802
FbaI TGATCA 1 cut(s) 859
Fnu4HI GCNGC 7 cut(s) 63, 428, 660, 784, 1052, 1071, 1347
FokI GGATG 2 cut(s) 197, 606
FriOI GRGCYC 2 cut(s) 126, 671
Fsp4HI GCNGC 7 cut(s) 63, 428, 660, 784, 1052, 1071, 1347
FspBI CTAG 2 cut(s) 158, 557
GluI GCNGC 7 cut(s) 63, 428, 660, 784, 1052, 1071, 1347
HaeIII GGCC 3 cut(s) 242, 318, 351
HapII CCGG 2 cut(s) 348, 1025
HindIII AAGCTT 3 cut(s) 376, 1112, 1351
HinfI GANTC 4 cut(s) 80, 532, 871, 926
HpaII CCGG 2 cut(s) 348, 1025
HphI GGTGA 1 cut(s) 1210
Hpy166II GTNNAC 1 cut(s) 614
Hpy188I TCNGA 4 cut(s) 200, 757, 892, 976
Hpy188III TCNNGA 5 cut(s) 167, 271, 672, 748, 771
Hpy8I GTNNAC 1 cut(s) 614
HpyAV CCTTC 1 cut(s) 1285
HpyCH4III ACNGT 7 cut(s) 70, 230, 256, 454, 549, 1233, 1261
HpyCH4IV ACGT 1 cut(s) 523
HpyF10VI GCNNNNNNNGC 5 cut(s) 384, 605, 659, 1010, 1079
HpyF3I CTNAG 6 cut(s) 197, 402, 909, 918, 973, 1219
HpySE526I ACGT 1 cut(s) 523
Ksp22I TGATCA 1 cut(s) 859
Kzo9I GATC 6 cut(s) 113, 200, 327, 859, 912, 1369
LguI GCTCTTC 1 cut(s) 824
LmnI GCTCC 2 cut(s) 121, 196
Lsp1109I GCAGC 6 cut(s) 74, 439, 646, 770, 1038, 1082
LweI GCATC 3 cut(s) 276, 396, 1013
MaeI CTAG 2 cut(s) 158, 557
MaeII ACGT 1 cut(s) 523
MaeIII GTNAC 1 cut(s) 418
MalI GATC 6 cut(s) 115, 202, 329, 861, 914, 1371
MboI GATC 6 cut(s) 113, 200, 327, 859, 912, 1369
MboII GAAGA 4 cut(s) 358, 841, 893, 911
MflI RGATCY 3 cut(s) 200, 912, 1369
MhlI GDGCHC 3 cut(s) 126, 671, 1211
MmeI TCCRAC 2 cut(s) 436, 1252
MnlI CCTC 9 cut(s) 139, 181, 206, 452, 624, 895, 980, 991, 1282
MseI TTAA 5 cut(s) 297, 374, 467, 987, 1308
MslI CAYNNNNRTG 2 cut(s) 54, 1083
MspA1I CMGCKG 3 cut(s) 430, 713, 783
MspI CCGG 2 cut(s) 348, 1025
MspR9I CCNGG 2 cut(s) 222, 239
MvaI CCWGG 2 cut(s) 222, 239
MvnI CGCG 1 cut(s) 1346
MwoI GCNNNNNNNGC 5 cut(s) 384, 605, 659, 1010, 1079
NcoI CCATGG 1 cut(s) 243
NdeI CATATG 1 cut(s) 802
NdeII GATC 6 cut(s) 113, 200, 327, 859, 912, 1369
NlaIV GGNNCC 5 cut(s) 102, 123, 192, 906, 1208
NspI RCATGY 2 cut(s) 580, 1082
PaeI GCATGC 1 cut(s) 1082
PaqCI CACCTGC 1 cut(s) 1073
PciI ACATGT 1 cut(s) 576
PciSI GCTCTTC 1 cut(s) 824
PfeI GAWTC 4 cut(s) 80, 532, 871, 926
PflMI CCANNNNNTGG 4 cut(s) 244, 455, 936, 1061
PfoI TCCNGGA 1 cut(s) 220
PkrI GCNGC 7 cut(s) 64, 429, 661, 785, 1053, 1072, 1348
Ple19I CGATCG 1 cut(s) 330
PscI ACATGT 1 cut(s) 576
Psp124BI GAGCTC 1 cut(s) 671
Psp6I CCWGG 2 cut(s) 220, 237
PspGI CCWGG 2 cut(s) 220, 237
PspN4I GGNNCC 5 cut(s) 102, 123, 192, 906, 1208
PspPI GGNCC 5 cut(s) 148, 164, 218, 317, 446
PstI CTGCAG 1 cut(s) 664
PstNI CAGNNNCTG 1 cut(s) 1088
PsuI RGATCY 3 cut(s) 200, 912, 1369
PvuI CGATCG 1 cut(s) 330
PvuII CAGCTG 3 cut(s) 430, 713, 783
RsaI GTAC 2 cut(s) 717, 1362
RsaNI GTAC 2 cut(s) 716, 1361
RseI CAYNNNNRTG 2 cut(s) 54, 1083
SacI GAGCTC 1 cut(s) 671
SapI GCTCTTC 1 cut(s) 824
SaqAI TTAA 5 cut(s) 297, 374, 467, 987, 1308
SatI GCNGC 7 cut(s) 63, 428, 660, 784, 1052, 1071, 1347
Sau3AI GATC 6 cut(s) 113, 200, 327, 859, 912, 1369
Sau96I GGNCC 5 cut(s) 148, 164, 218, 317, 446
ScrFI CCNGG 2 cut(s) 222, 239
SduI GDGCHC 3 cut(s) 126, 671, 1211
SfaNI GCATC 3 cut(s) 276, 396, 1013
SfcI CTRYAG 2 cut(s) 660, 1283
SinI GGWCC 4 cut(s) 148, 164, 218, 446
SmiMI CAYNNNNRTG 2 cut(s) 54, 1083
SphI GCATGC 1 cut(s) 1082
SsiI CCGC 2 cut(s) 689, 1346
SspI AATATT 1 cut(s) 980
SspMI CTAG 2 cut(s) 158, 557
SstI GAGCTC 1 cut(s) 671
StyD4I CCNGG 2 cut(s) 220, 237
StyI CCWWGG 2 cut(s) 180, 243
TaaI ACNGT 7 cut(s) 70, 230, 256, 454, 549, 1233, 1261
TaiI ACGT 1 cut(s) 526
TaqI TCGA 1 cut(s) 336
TatI WGTACW 2 cut(s) 715, 1360
TauI GCSGC 1 cut(s) 1349
TfiI GAWTC 4 cut(s) 80, 532, 871, 926
Tru1I TTAA 5 cut(s) 297, 374, 467, 987, 1308
Tru9I TTAA 5 cut(s) 297, 374, 467, 987, 1308
TscAI CASTG 1 cut(s) 669
TseI GCWGC 6 cut(s) 62, 427, 659, 783, 1051, 1070
TspDTI ATGAA 5 cut(s) 912, 1031, 1118, 1243, 1267
TspRI CASTG 1 cut(s) 669
Van91I CCANNNNNTGG 4 cut(s) 244, 455, 936, 1061
VpaK11BI GGWCC 4 cut(s) 148, 164, 218, 446
XapI RAATTY 4 cut(s) 341, 841, 885, 1170
XceI RCATGY 2 cut(s) 580, 1082
XcmI CCANNNNNNNNNTGG 1 cut(s) 158
XspI CTAG 2 cut(s) 158, 557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.