Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G55730 AT1G55730 AT3G13320 |
| fragaria_vesca | FvH4_3g41890 FvH4_3g41890 FvH4_3g41890 FvH4_3g41890 FvH4_3g41890 FvH4_3g41890 FvH4_3g41890 FvH4_3g41890 FvH4_6g40200 FvH4_6g40200 FvH4_6g40200 |
| malus_domestica | MD03G1040300.v1.1 MD09G1134300.v1.1 MD11G1041700.v1.1 MD17G1123100.v1.1 |
| prunus_persica | Prupe.3G192400_v2.0.a1 Prupe.6G032600_v2.0.a1 Prupe.6G032600_v2.0.a1 Prupe.6G032600_v2.0.a1 |
| pyrus_communis | pycom03g03100 pycom11g03540 |
| rosa_chinensis | RchiOBHm_Chr2g0155221 RchiOBHm_Chr5g0075081 |
| rosa_laevigata | RLG00000020827 RLG00000036528 |
| rosa_multiflora | Rmu_sc0006984.1_g000024 Rmu_sc0012066.1_g000002 Rmu_sc0028924.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00006540 Rroxscaffold_2G00093860 |
| rosa_rugosa | Rorug02G0446100 Rorug02G0446100 Rorug05G0436000 Rorug05G0436100 |
| rosa_samantha | Rh2AG512500 Rh2CG497500 Rh5AG493500 Rh5CG538700 |
| rosa_wichuraiana | Rw2G042100 Rw5G045760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3845 |
| AatII | GACGTC | 1 cut(s) | 2549 |
| Acc36I | ACCTGC | 3 cut(s) | 2304, 2560, 3105 |
| AccB1I | GGYRCC | 2 cut(s) | 71, 2246 |
| AccBSI | CCGCTC | 1 cut(s) | 3819 |
| AccII | CGCG | 1 cut(s) | 2215 |
| AclWI | GGATC | 6 cut(s) | 135, 366, 1048, 1632, 1767, 3091 |
| AcoI | YGGCCR | 2 cut(s) | 975, 1093 |
| AcsI | RAATTY | 9 cut(s) | 284, 762, 1368, 1727, 2726, 2783, 3206, 3915, 3946 |
| AcuI | CTGAAG | 7 cut(s) | 38, 476, 1604, 1719, 1971, 2205, 2394 |
| AcyI | GRCGYC | 3 cut(s) | 72, 105, 2546 |
| AdeI | CACNNNGTG | 1 cut(s) | 3635 |
| AflII | CTTAAG | 1 cut(s) | 3803 |
| AflIII | ACRYGT | 1 cut(s) | 1567 |
| AgeI | ACCGGT | 1 cut(s) | 3991 |
| AhlI | ACTAGT | 1 cut(s) | 464 |
| AjnI | CCWGG | 6 cut(s) | 610, 1333, 2127, 2869, 3079, 3479 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 568, 600 |
| AleI | CACNNNNGTG | 2 cut(s) | 1227, 1229 |
| Alw21I | GWGCWC | 2 cut(s) | 802, 2030 |
| Alw26I | GTCTC | 4 cut(s) | 455, 1558, 1776, 3969 |
| AlwI | GGATC | 6 cut(s) | 135, 366, 1048, 1632, 1767, 3091 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 617, 1127, 2039, 3863 |
| AoxI | GGCC | 9 cut(s) | 716, 975, 1093, 1418, 1807, 2251, 2384, 2881, 3835 |
| ApeKI | GCWGC | 8 cut(s) | 301, 1862, 2671, 3509, 3675, 3745, 3890, 3902 |
| ApoI | RAATTY | 9 cut(s) | 284, 762, 1368, 1727, 2726, 2783, 3206, 3915, 3946 |
| AseI | ATTAAT | 2 cut(s) | 1479, 3720 |
| AsiGI | ACCGGT | 1 cut(s) | 3991 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 512, 2281, 2491, 3459 |
| AspLEI | GCGC | 2 cut(s) | 74, 2719 |
| AspS9I | GGNCC | 5 cut(s) | 917, 1807, 2252, 3980, 4022 |
| AsuC2I | CCSGG | 2 cut(s) | 528, 4059 |
| AvaII | GGWCC | 3 cut(s) | 917, 3980, 4022 |
| AxyI | CCTNAGG | 1 cut(s) | 1128 |
| BalI | TGGCCA | 1 cut(s) | 977 |
| BanI | GGYRCC | 2 cut(s) | 71, 2246 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 314, 346, 2838, 2870 |
| BauI | CACGAG | 1 cut(s) | 645 |
| BbsI | GAAGAC | 4 cut(s) | 45, 984, 1946, 2382 |
| Bbv12I | GWGCWC | 2 cut(s) | 802, 2030 |
| BbvI | GCAGC | 8 cut(s) | 313, 1874, 2683, 3496, 3687, 3757, 3877, 3914 |
| BccI | CCATC | 9 cut(s) | 542, 1276, 1294, 1736, 2159, 2786, 3362, 3827, 3862 |
| BceAI | ACGGC | 4 cut(s) | 59, 85, 1080, 1167 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1808, 1842 |
| BciT130I | CCWGG | 6 cut(s) | 612, 1335, 2129, 2871, 3081, 3481 |
| BciVI | GTATCC | 3 cut(s) | 205, 323, 3478 |
| BclI | TGATCA | 2 cut(s) | 3502, 3619 |
| BcnI | CCSGG | 2 cut(s) | 528, 4059 |
| BcoDI | GTCTC | 4 cut(s) | 455, 1558, 1776, 3969 |
| BcuI | ACTAGT | 1 cut(s) | 464 |
| BfmI | CTRYAG | 2 cut(s) | 3647, 3743 |
| BfoI | RGCGCY | 1 cut(s) | 75 |
| BfrI | CTTAAG | 1 cut(s) | 3803 |
| BfuAI | ACCTGC | 3 cut(s) | 2304, 2560, 3105 |
| BfuI | GTATCC | 3 cut(s) | 205, 323, 3478 |
| BlpI | GCTNAGC | 2 cut(s) | 2024, 2817 |
| BmcAI | AGTACT | 1 cut(s) | 3401 |
| Bme1390I | CCNGG | 8 cut(s) | 528, 612, 1335, 2129, 2871, 3081, 3481, 4059 |
| Bme18I | GGWCC | 3 cut(s) | 917, 3980, 4022 |
| BmgT120I | GGNCC | 5 cut(s) | 917, 1807, 2252, 3980, 4022 |
| BmiI | GGNNCC | 5 cut(s) | 73, 1339, 2248, 3072, 3640 |
| BmrFI | CCNGG | 8 cut(s) | 528, 612, 1335, 2129, 2871, 3081, 3481, 4059 |
| BmrI | ACTGGG | 1 cut(s) | 2943 |
| BmuI | ACTGGG | 1 cut(s) | 2943 |
| BpiI | GAAGAC | 4 cut(s) | 45, 984, 1946, 2382 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1124, 1156, 3083, 3115, 3512, 3544 |
| BpmI | CTGGAG | 2 cut(s) | 3072, 3927 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2024, 2817 |
| BpuEI | CTTGAG | 1 cut(s) | 722 |
| BpuMI | CCSGG | 2 cut(s) | 528, 4059 |
| BsaBI | GATNNNNATC | 3 cut(s) | 9, 26, 2478 |
| BsaHI | GRCGYC | 3 cut(s) | 72, 105, 2546 |
| BsaJI | CCNNGG | 6 cut(s) | 2870, 3435, 3480, 3516, 3585, 4057 |
| BsaWI | WCCGGW | 1 cut(s) | 3991 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1729, 1759, 2020, 2050, 2106, 2136 |
| Bse118I | RCCGGY | 3 cut(s) | 1018, 2249, 3991 |
| Bse21I | CCTNAGG | 1 cut(s) | 1128 |
| Bse3DI | GCAATG | 2 cut(s) | 569, 1539 |
| Bse8I | GATNNNNATC | 3 cut(s) | 9, 26, 2478 |
| BseBI | CCWGG | 6 cut(s) | 612, 1335, 2129, 2871, 3081, 3481 |
| BseDI | CCNNGG | 6 cut(s) | 2870, 3435, 3480, 3516, 3585, 4057 |
| BseJI | GATNNNNATC | 3 cut(s) | 9, 26, 2478 |
| BseMI | GCAATG | 2 cut(s) | 569, 1539 |
| BseMII | CTCAG | 6 cut(s) | 1119, 1289, 2015, 2678, 3114, 3135 |
| BseRI | GAGGAG | 5 cut(s) | 1145, 1750, 3107, 3957, 3960 |
| BseXI | GCAGC | 8 cut(s) | 313, 1874, 2683, 3496, 3687, 3757, 3877, 3914 |
| BseYI | CCCAGC | 2 cut(s) | 1457, 2193 |
| BsgI | GTGCAG | 2 cut(s) | 1592, 1881 |
| Bsh1236I | CGCG | 1 cut(s) | 2215 |
| BshFI | GGCC | 9 cut(s) | 718, 977, 1095, 1420, 1809, 2253, 2386, 2883, 3837 |
| BshNI | GGYRCC | 2 cut(s) | 71, 2246 |
| BshTI | ACCGGT | 1 cut(s) | 3991 |
| BsiHKAI | GWGCWC | 2 cut(s) | 802, 2030 |
| BsiSI | CCGG | 6 cut(s) | 33, 527, 1019, 2250, 3992, 4059 |
| BslFI | GGGAC | 2 cut(s) | 1474, 2533 |
| BsmAI | GTCTC | 4 cut(s) | 455, 1558, 1776, 3969 |
| BsmFI | GGGAC | 2 cut(s) | 1474, 2533 |
| BsnI | GGCC | 9 cut(s) | 718, 977, 1095, 1420, 1809, 2253, 2386, 2883, 3837 |
| Bsp1286I | GDGCHC | 2 cut(s) | 802, 2030 |
| Bsp1407I | TGTACA | 2 cut(s) | 3940, 4034 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2024, 2817 |
| Bsp19I | CCATGG | 1 cut(s) | 3435 |
| BspANI | GGCC | 9 cut(s) | 718, 977, 1095, 1420, 1809, 2253, 2386, 2883, 3837 |
| BspCNI | CTCAG | 6 cut(s) | 1120, 1290, 2016, 2677, 3113, 3134 |
| BspFNI | CGCG | 1 cut(s) | 2215 |
| BspHI | TCATGA | 2 cut(s) | 1408, 2730 |
| BspLI | GGNNCC | 5 cut(s) | 73, 1339, 2248, 3072, 3640 |
| BspMAI | CTGCAG | 2 cut(s) | 3651, 3747 |
| BspMI | ACCTGC | 3 cut(s) | 2304, 2560, 3105 |
| BspPI | GGATC | 6 cut(s) | 135, 366, 1048, 1632, 1767, 3091 |
| BspQI | GCTCTTC | 1 cut(s) | 1695 |
| BspT107I | GGYRCC | 2 cut(s) | 71, 2246 |
| BspTI | CTTAAG | 1 cut(s) | 3803 |
| BsrBI | CCGCTC | 1 cut(s) | 3819 |
| BsrDI | GCAATG | 2 cut(s) | 569, 1539 |
| BsrFI | RCCGGY | 3 cut(s) | 1018, 2249, 3991 |
| BsrGI | TGTACA | 2 cut(s) | 3940, 4034 |
| BssAI | RCCGGY | 3 cut(s) | 1018, 2249, 3991 |
| BssECI | CCNNGG | 6 cut(s) | 2870, 3435, 3480, 3516, 3585, 4057 |
| BssNI | GRCGYC | 3 cut(s) | 72, 105, 2546 |
| BssSI | CACGAG | 1 cut(s) | 645 |
| BssT1I | CCWWGG | 2 cut(s) | 3435, 3585 |
| Bst2BI | CACGAG | 1 cut(s) | 645 |
| Bst2UI | CCWGG | 6 cut(s) | 612, 1335, 2129, 2871, 3081, 3481 |
| Bst4CI | ACNGT | 6 cut(s) | 829, 1465, 1814, 2418, 2942, 3467 |
| Bst6I | CTCTTC | 9 cut(s) | 305, 453, 498, 709, 1221, 1695, 2482, 2751, 2907 |
| BstACI | GRCGYC | 3 cut(s) | 72, 105, 2546 |
| BstAFI | CTTAAG | 1 cut(s) | 3803 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 681, 3251, 3695 |
| BstAUI | TGTACA | 2 cut(s) | 3940, 4034 |
| BstC8I | GCNNGC | 9 cut(s) | 122, 582, 622, 720, 1575, 1983, 2251, 2448, 3243 |
| BstDSI | CCRYGG | 2 cut(s) | 3435, 3516 |
| BstEII | GGTNACC | 1 cut(s) | 1135 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3975 |
| BstFNI | CGCG | 1 cut(s) | 2215 |
| BstH2I | RGCGCY | 1 cut(s) | 75 |
| BstHHI | GCGC | 2 cut(s) | 74, 2719 |
| BstMAI | GTCTC | 4 cut(s) | 455, 1558, 1776, 3969 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 590, 672, 681, 1169, 2585, 3251, 3695, 3899 |
| BstNI | CCWGG | 6 cut(s) | 612, 1335, 2129, 2871, 3081, 3481 |
| BstNSI | RCATGY | 4 cut(s) | 584, 1571, 1964, 3579 |
| BstPI | GGTNACC | 1 cut(s) | 1135 |
| BstSCI | CCNGG | 8 cut(s) | 526, 610, 1333, 2127, 2869, 3079, 3479, 4057 |
| BstSFI | CTRYAG | 2 cut(s) | 3647, 3743 |
| BstUI | CGCG | 1 cut(s) | 2215 |
| BstV1I | GCAGC | 8 cut(s) | 313, 1874, 2683, 3496, 3687, 3757, 3877, 3914 |
| BstV2I | GAAGAC | 4 cut(s) | 45, 984, 1946, 2382 |
| BstX2I | RGATCY | 2 cut(s) | 140, 3083 |
| BstYI | RGATCY | 2 cut(s) | 140, 3083 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1128 |
| BsuI | GTATCC | 3 cut(s) | 205, 323, 3478 |
| BsuRI | GGCC | 9 cut(s) | 718, 977, 1095, 1420, 1809, 2253, 2386, 2883, 3837 |
| BtgI | CCRYGG | 2 cut(s) | 3435, 3516 |
| BtsI | GCAGTG | 3 cut(s) | 427, 682, 3426 |
| BveI | ACCTGC | 3 cut(s) | 2304, 2560, 3105 |
| Cac8I | GCNNGC | 9 cut(s) | 122, 582, 622, 720, 1575, 1983, 2251, 2448, 3243 |
| CaiI | CAGNNNCTG | 4 cut(s) | 617, 1127, 2039, 3863 |
| CciI | TCATGA | 2 cut(s) | 1408, 2730 |
| CfoI | GCGC | 2 cut(s) | 74, 2719 |
| Cfr10I | RCCGGY | 3 cut(s) | 1018, 2249, 3991 |
| Cfr13I | GGNCC | 5 cut(s) | 917, 1807, 2252, 3980, 4022 |
| CseI | GACGC | 1 cut(s) | 113 |
| CsiI | ACCWGGT | 1 cut(s) | 610 |
| CspAI | ACCGGT | 1 cut(s) | 3991 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 643, 678, 3913, 3948 |
| DinI | GGCGCC | 1 cut(s) | 73 |
| DraI | TTTAAA | 2 cut(s) | 2529, 2623 |
| DraIII | CACNNNGTG | 1 cut(s) | 3635 |
| EaeI | YGGCCR | 2 cut(s) | 975, 1093 |
| Eam1104I | CTCTTC | 9 cut(s) | 305, 453, 498, 709, 1221, 1695, 2482, 2751, 2907 |
| EarI | CTCTTC | 9 cut(s) | 305, 453, 498, 709, 1221, 1695, 2482, 2751, 2907 |
| EciI | GGCGGA | 1 cut(s) | 1592 |
| Eco130I | CCWWGG | 2 cut(s) | 3435, 3585 |
| Eco147I | AGGCCT | 1 cut(s) | 718 |
| Eco32I | GATATC | 2 cut(s) | 2827, 2950 |
| Eco47I | GGWCC | 3 cut(s) | 917, 3980, 4022 |
| Eco57I | CTGAAG | 7 cut(s) | 38, 476, 1604, 1719, 1971, 2205, 2394 |
| Eco81I | CCTNAGG | 1 cut(s) | 1128 |
| Eco91I | GGTNACC | 1 cut(s) | 1135 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3975 |
| EcoO65I | GGTNACC | 1 cut(s) | 1135 |
| EcoRI | GAATTC | 1 cut(s) | 3946 |
| EcoRII | CCWGG | 6 cut(s) | 610, 1333, 2127, 2869, 3079, 3479 |
| EcoRV | GATATC | 2 cut(s) | 2827, 2950 |
| EcoT14I | CCWWGG | 2 cut(s) | 3435, 3585 |
| EcoT22I | ATGCAT | 1 cut(s) | 1174 |
| EgeI | GGCGCC | 1 cut(s) | 73 |
| EheI | GGCGCC | 1 cut(s) | 73 |
| ErhI | CCWWGG | 2 cut(s) | 3435, 3585 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 337, 369, 3822, 3854 |
| FaqI | GGGAC | 2 cut(s) | 1474, 2533 |
| FauI | CCCGC | 3 cut(s) | 306, 613, 2272 |
| FauNDI | CATATG | 1 cut(s) | 1090 |
| FbaI | TGATCA | 2 cut(s) | 3502, 3619 |
| GlaI | GCGC | 2 cut(s) | 73, 2718 |
| GsaI | CCCAGC | 2 cut(s) | 1461, 2197 |
| GsuI | CTGGAG | 2 cut(s) | 3072, 3927 |
| HaeII | RGCGCY | 1 cut(s) | 75 |
| HaeIII | GGCC | 9 cut(s) | 718, 977, 1095, 1420, 1809, 2253, 2386, 2883, 3837 |
| HapII | CCGG | 6 cut(s) | 33, 527, 1019, 2250, 3992, 4059 |
| HgaI | GACGC | 1 cut(s) | 113 |
| HhaI | GCGC | 2 cut(s) | 74, 2719 |
| Hin1I | GRCGYC | 3 cut(s) | 72, 105, 2546 |
| Hin6I | GCGC | 2 cut(s) | 72, 2717 |
| HinP1I | GCGC | 2 cut(s) | 72, 2717 |
| HindIII | AAGCTT | 2 cut(s) | 1320, 2448 |
| HpaII | CCGG | 6 cut(s) | 33, 527, 1019, 2250, 3992, 4059 |
| Hpy99I | CGWCG | 3 cut(s) | 104, 107, 2548 |
| HpyCH4III | ACNGT | 6 cut(s) | 829, 1465, 1814, 2418, 2942, 3467 |
| HpyCH4IV | ACGT | 3 cut(s) | 822, 2546, 2769 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 590, 672, 681, 1169, 2585, 3251, 3695, 3899 |
| HpySE526I | ACGT | 3 cut(s) | 822, 2546, 2769 |
| Hsp92I | GRCGYC | 3 cut(s) | 72, 105, 2546 |
| HspAI | GCGC | 2 cut(s) | 72, 2717 |
| KasI | GGCGCC | 1 cut(s) | 71 |
| KroI | GCCGGC | 1 cut(s) | 2249 |
| KroNI | GCCGGC | 1 cut(s) | 2251 |
| Ksp22I | TGATCA | 2 cut(s) | 3502, 3619 |
| LguI | GCTCTTC | 1 cut(s) | 1695 |
| LmnI | GCTCC | 3 cut(s) | 1343, 2041, 3816 |
| Lsp1109I | GCAGC | 8 cut(s) | 313, 1874, 2683, 3496, 3687, 3757, 3877, 3914 |
| MabI | ACCWGGT | 1 cut(s) | 610 |
| MaeII | ACGT | 3 cut(s) | 822, 2546, 2769 |
| MaeIII | GTNAC | 5 cut(s) | 823, 1021, 1135, 1447, 3421 |
| MbiI | CCGCTC | 1 cut(s) | 3819 |
| MfeI | CAATTG | 4 cut(s) | 2051, 2256, 2598, 3894 |
| MflI | RGATCY | 2 cut(s) | 140, 3083 |
| MhlI | GDGCHC | 2 cut(s) | 802, 2030 |
| MlsI | TGGCCA | 1 cut(s) | 977 |
| MluNI | TGGCCA | 1 cut(s) | 977 |
| Mly113I | GGCGCC | 1 cut(s) | 72 |
| MlyI | GAGTC | 7 cut(s) | 38, 862, 2231, 2333, 3104, 3521, 3530 |
| MmeI | TCCRAC | 2 cut(s) | 983, 2142 |
| Mox20I | TGGCCA | 1 cut(s) | 977 |
| Mph1103I | ATGCAT | 1 cut(s) | 1174 |
| MroNI | GCCGGC | 1 cut(s) | 2249 |
| MroXI | GAANNNNTTC | 4 cut(s) | 512, 2281, 2491, 3459 |
| MscI | TGGCCA | 1 cut(s) | 977 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1227, 1229, 1360 |
| Msp20I | TGGCCA | 1 cut(s) | 977 |
| MspA1I | CMGCKG | 2 cut(s) | 1865, 3905 |
| MspCI | CTTAAG | 1 cut(s) | 3803 |
| MspI | CCGG | 6 cut(s) | 33, 527, 1019, 2250, 3992, 4059 |
| MspR9I | CCNGG | 8 cut(s) | 528, 612, 1335, 2129, 2871, 3081, 3481, 4059 |
| MunI | CAATTG | 4 cut(s) | 2051, 2256, 2598, 3894 |
| MvaI | CCWGG | 6 cut(s) | 612, 1335, 2129, 2871, 3081, 3481 |
| MvnI | CGCG | 1 cut(s) | 2215 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 590, 672, 681, 1169, 2585, 3251, 3695, 3899 |
| NaeI | GCCGGC | 1 cut(s) | 2251 |
| NarI | GGCGCC | 1 cut(s) | 72 |
| NciI | CCSGG | 2 cut(s) | 528, 4059 |
| NcoI | CCATGG | 1 cut(s) | 3435 |
| NdeI | CATATG | 1 cut(s) | 1090 |
| NgoMIV | GCCGGC | 1 cut(s) | 2249 |
| NlaIV | GGNNCC | 5 cut(s) | 73, 1339, 2248, 3072, 3640 |
| NmuCI | GTSAC | 4 cut(s) | 823, 1135, 1447, 3421 |
| NsiI | ATGCAT | 1 cut(s) | 1174 |
| NspI | RCATGY | 4 cut(s) | 584, 1571, 1964, 3579 |
| OliI | CACNNNNGTG | 2 cut(s) | 1227, 1229 |
| PaeI | GCATGC | 1 cut(s) | 584 |
| PagI | TCATGA | 2 cut(s) | 1408, 2730 |
| PceI | AGGCCT | 1 cut(s) | 718 |
| PciI | ACATGT | 1 cut(s) | 1567 |
| PciSI | GCTCTTC | 1 cut(s) | 1695 |
| PdiI | GCCGGC | 1 cut(s) | 2251 |
| PdmI | GAANNNNTTC | 4 cut(s) | 512, 2281, 2491, 3459 |
| PfoI | TCCNGGA | 1 cut(s) | 526 |
| PinAI | ACCGGT | 1 cut(s) | 3991 |
| PleI | GAGTC | 7 cut(s) | 38, 861, 2230, 2333, 3103, 3521, 3529 |
| PluTI | GGCGCC | 1 cut(s) | 75 |
| PpsI | GAGTC | 7 cut(s) | 38, 861, 2230, 2333, 3103, 3521, 3529 |
| PscI | ACATGT | 1 cut(s) | 1567 |
| PshBI | ATTAAT | 2 cut(s) | 1479, 3720 |
| PsiI | TTATAA | 1 cut(s) | 3845 |
| Psp6I | CCWGG | 6 cut(s) | 610, 1333, 2127, 2869, 3079, 3479 |
| PspEI | GGTNACC | 1 cut(s) | 1135 |
| PspFI | CCCAGC | 2 cut(s) | 1457, 2193 |
| PspGI | CCWGG | 6 cut(s) | 610, 1333, 2127, 2869, 3079, 3479 |
| PspN4I | GGNNCC | 5 cut(s) | 73, 1339, 2248, 3072, 3640 |
| PspPI | GGNCC | 5 cut(s) | 917, 1807, 2252, 3980, 4022 |
| PstI | CTGCAG | 2 cut(s) | 3651, 3747 |
| PstNI | CAGNNNCTG | 4 cut(s) | 617, 1127, 2039, 3863 |
| PsuI | RGATCY | 2 cut(s) | 140, 3083 |
| PvuII | CAGCTG | 2 cut(s) | 1865, 3905 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1227, 1229, 1360 |
| SapI | GCTCTTC | 1 cut(s) | 1695 |
| Sau96I | GGNCC | 5 cut(s) | 917, 1807, 2252, 3980, 4022 |
| ScaI | AGTACT | 1 cut(s) | 3401 |
| SchI | GAGTC | 7 cut(s) | 38, 862, 2231, 2333, 3104, 3521, 3530 |
| ScrFI | CCNGG | 8 cut(s) | 528, 612, 1335, 2129, 2871, 3081, 3481, 4059 |
| SduI | GDGCHC | 2 cut(s) | 802, 2030 |
| SexAI | ACCWGGT | 1 cut(s) | 610 |
| SfcI | CTRYAG | 2 cut(s) | 3647, 3743 |
| SfoI | GGCGCC | 1 cut(s) | 73 |
| SgrAI | CRCCGGYG | 1 cut(s) | 3991 |
| SinI | GGWCC | 3 cut(s) | 917, 3980, 4022 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1227, 1229, 1360 |
| SmlI | CTYRAG | 2 cut(s) | 737, 3803 |
| SmoI | CTYRAG | 2 cut(s) | 737, 3803 |
| SpeI | ACTAGT | 1 cut(s) | 464 |
| SphI | GCATGC | 1 cut(s) | 584 |
| SseBI | AGGCCT | 1 cut(s) | 718 |
| SspDI | GGCGCC | 1 cut(s) | 71 |
| SspI | AATATT | 4 cut(s) | 1477, 1693, 2359, 3181 |
| StuI | AGGCCT | 1 cut(s) | 718 |
| StyD4I | CCNGG | 8 cut(s) | 526, 610, 1333, 2127, 2869, 3079, 3479, 4057 |
| StyI | CCWWGG | 2 cut(s) | 3435, 3585 |
| TaaI | ACNGT | 6 cut(s) | 829, 1465, 1814, 2418, 2942, 3467 |
| TaiI | ACGT | 3 cut(s) | 825, 2549, 2772 |
| TaqI | TCGA | 4 cut(s) | 24, 361, 1818, 2543 |
| TatI | WGTACW | 8 cut(s) | 533, 950, 1793, 1931, 3190, 3399, 3940, 4034 |
| TauI | GCSGC | 2 cut(s) | 95, 1532 |
| TseFI | GTSAC | 4 cut(s) | 823, 1135, 1447, 3421 |
| TseI | GCWGC | 8 cut(s) | 301, 1862, 2671, 3509, 3675, 3745, 3890, 3902 |
| Tsp45I | GTSAC | 4 cut(s) | 823, 1135, 1447, 3421 |
| TspGWI | ACGGA | 5 cut(s) | 643, 865, 1495, 3505, 4015 |
| Vha464I | CTTAAG | 1 cut(s) | 3803 |
| VpaK11BI | GGWCC | 3 cut(s) | 917, 3980, 4022 |
| VspI | ATTAAT | 2 cut(s) | 1479, 3720 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3975 |
| XapI | RAATTY | 9 cut(s) | 284, 762, 1368, 1727, 2726, 2783, 3206, 3915, 3946 |
| XbaI | TCTAGA | 1 cut(s) | 1898 |
| XceI | RCATGY | 4 cut(s) | 584, 1571, 1964, 3579 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 970 |
| XmnI | GAANNNNTTC | 4 cut(s) | 512, 2281, 2491, 3459 |
| ZraI | GACGTC | 1 cut(s) | 2547 |
| ZrmI | AGTACT | 1 cut(s) | 3401 |
| Zsp2I | ATGCAT | 1 cut(s) | 1174 |