Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion (By similarity)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G15290 |
| fragaria_vesca | FvH4_4g31110 FvH4_6g48140 |
| malus_domestica | MD09G1053500.v1.1 MD13G1069600.v1.1 MD13G1069700.v1.1 MD16G1070000.v1.1 |
| prunus_persica | Prupe.1G277100_v2.0.a1 Prupe.1G277100_v2.0.a1 Prupe.3G264800_v2.0.a1 Prupe.3G264900_v2.0.a1 |
| pyrus_communis | pycom13g06250 pycom16g06100 |
| rosa_chinensis | RchiOBHm_Chr2g0167481 RchiOBHm_Chr4g0439491 |
| rosa_laevigata | RLG00000006266 RLG00000021723 |
| rosa_multiflora | Rmu_sc0001206.1_g000035 Rmu_sc0007276.1_g000008 Rmu_sc0043018.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00083450 Rroxscaffold_2G00083460 Rroxscaffold_5G00380400 |
| rosa_rugosa | Rorug02G0530500 Rorug04G0318700 Rorug04G0318800 |
| rosa_samantha | Rh2AG597700 Rh2AG597800 Rh2BG609200 Rh2BG609300 Rh2CG580100 Rh2CG580200 Rh2DG620500 Rh2DG620600 Rh4AG370000 Rh4BG382000 Rh4CG396600 Rh4DG376700 |
| rosa_wichuraiana | Rw2G049740 Rw4G031550 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 368 |
| Acc36I | ACCTGC | 1 cut(s) | 368 |
| Acc65I | GGTACC | 1 cut(s) | 125 |
| AccB1I | GGYRCC | 2 cut(s) | 125, 380 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 62 |
| AccI | GTMKAC | 1 cut(s) | 405 |
| AclWI | GGATC | 2 cut(s) | 116, 508 |
| AcuI | CTGAAG | 1 cut(s) | 176 |
| AfaI | GTAC | 2 cut(s) | 127, 209 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 62 |
| AgsI | TTSAA | 2 cut(s) | 48, 463 |
| AluBI | AGCT | 4 cut(s) | 17, 25, 398, 548 |
| AluI | AGCT | 4 cut(s) | 17, 25, 398, 548 |
| AlwI | GGATC | 2 cut(s) | 116, 508 |
| ApeKI | GCWGC | 6 cut(s) | 8, 389, 392, 395, 548, 551 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 168 |
| Asp718I | GGTACC | 1 cut(s) | 125 |
| AspLEI | GCGC | 1 cut(s) | 480 |
| AsuHPI | GGTGA | 2 cut(s) | 41, 82 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 117, 150 |
| BanI | GGYRCC | 2 cut(s) | 125, 380 |
| BbvI | GCAGC | 6 cut(s) | 20, 401, 404, 407, 535, 563 |
| BccI | CCATC | 2 cut(s) | 299, 455 |
| BceAI | ACGGC | 1 cut(s) | 369 |
| BfaI | CTAG | 3 cut(s) | 92, 159, 281 |
| BfmI | CTRYAG | 2 cut(s) | 387, 549 |
| BfuAI | ACCTGC | 1 cut(s) | 368 |
| BisI | GCNGC | 6 cut(s) | 9, 390, 393, 396, 549, 552 |
| BlsI | GCNGC | 6 cut(s) | 10, 391, 394, 397, 550, 553 |
| BmiI | GGNNCC | 4 cut(s) | 127, 154, 382, 490 |
| BmsI | GCATC | 2 cut(s) | 92, 489 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 467, 499 |
| BsaJI | CCNNGG | 3 cut(s) | 129, 147, 429 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 504, 534 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 62 |
| Bse3DI | GCAATG | 1 cut(s) | 363 |
| BseDI | CCNNGG | 3 cut(s) | 129, 147, 429 |
| BseGI | GGATG | 1 cut(s) | 83 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 62 |
| BseMI | GCAATG | 1 cut(s) | 363 |
| BseMII | CTCAG | 4 cut(s) | 118, 195, 197, 558 |
| BseXI | GCAGC | 6 cut(s) | 20, 401, 404, 407, 535, 563 |
| BshNI | GGYRCC | 2 cut(s) | 125, 380 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 62 |
| Bsp143I | GATC | 4 cut(s) | 108, 214, 339, 500 |
| Bsp19I | CCATGG | 1 cut(s) | 147 |
| BspCNI | CTCAG | 4 cut(s) | 117, 196, 196, 557 |
| BspLI | GGNNCC | 4 cut(s) | 127, 154, 382, 490 |
| BspMAI | CTGCAG | 2 cut(s) | 391, 553 |
| BspMI | ACCTGC | 1 cut(s) | 368 |
| BspPI | GGATC | 2 cut(s) | 116, 508 |
| BspQI | GCTCTTC | 1 cut(s) | 372 |
| BspT107I | GGYRCC | 2 cut(s) | 125, 380 |
| BsrDI | GCAATG | 1 cut(s) | 363 |
| BssECI | CCNNGG | 3 cut(s) | 129, 147, 429 |
| BssMI | GATC | 4 cut(s) | 108, 214, 339, 500 |
| BssNAI | GTATAC | 1 cut(s) | 406 |
| BssT1I | CCWWGG | 3 cut(s) | 129, 147, 429 |
| Bst1107I | GTATAC | 1 cut(s) | 406 |
| Bst6I | CTCTTC | 1 cut(s) | 372 |
| BstC8I | GCNNGC | 2 cut(s) | 455, 476 |
| BstDEI | CTNAG | 4 cut(s) | 104, 183, 204, 544 |
| BstDSI | CCRYGG | 1 cut(s) | 147 |
| BstF5I | GGATG | 1 cut(s) | 83 |
| BstHHI | GCGC | 1 cut(s) | 480 |
| BstKTI | GATC | 4 cut(s) | 111, 217, 342, 503 |
| BstMBI | GATC | 4 cut(s) | 108, 214, 339, 500 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 14, 48, 362, 389, 395, 486 |
| BstSFI | CTRYAG | 2 cut(s) | 387, 549 |
| BstV1I | GCAGC | 6 cut(s) | 20, 401, 404, 407, 535, 563 |
| BstX2I | RGATCY | 1 cut(s) | 500 |
| BstYI | RGATCY | 1 cut(s) | 500 |
| BstZ17I | GTATAC | 1 cut(s) | 406 |
| BtgI | CCRYGG | 1 cut(s) | 147 |
| BtgZI | GCGATG | 1 cut(s) | 97 |
| BtsCI | GGATG | 1 cut(s) | 83 |
| BveI | ACCTGC | 1 cut(s) | 368 |
| Cac8I | GCNNGC | 2 cut(s) | 455, 476 |
| CfoI | GCGC | 1 cut(s) | 480 |
| Csp6I | GTAC | 2 cut(s) | 126, 208 |
| CviAII | CATG | 1 cut(s) | 148 |
| CviQI | GTAC | 2 cut(s) | 126, 208 |
| DdeI | CTNAG | 4 cut(s) | 104, 183, 204, 544 |
| DpnI | GATC | 4 cut(s) | 110, 216, 341, 502 |
| DpnII | GATC | 4 cut(s) | 108, 214, 339, 500 |
| Eam1104I | CTCTTC | 1 cut(s) | 372 |
| EarI | CTCTTC | 1 cut(s) | 372 |
| Eco130I | CCWWGG | 3 cut(s) | 129, 147, 429 |
| Eco32I | GATATC | 1 cut(s) | 266 |
| Eco57I | CTGAAG | 1 cut(s) | 176 |
| EcoRV | GATATC | 1 cut(s) | 266 |
| EcoT14I | CCWWGG | 3 cut(s) | 129, 147, 429 |
| ErhI | CCWWGG | 3 cut(s) | 129, 147, 429 |
| FaeI | CATG | 1 cut(s) | 151 |
| FaiI | YATR | 3 cut(s) | 149, 305, 406 |
| FatI | CATG | 1 cut(s) | 147 |
| FblI | GTMKAC | 1 cut(s) | 405 |
| Fnu4HI | GCNGC | 6 cut(s) | 9, 390, 393, 396, 549, 552 |
| FokI | GGATG | 1 cut(s) | 70 |
| Fsp4HI | GCNGC | 6 cut(s) | 9, 390, 393, 396, 549, 552 |
| FspBI | CTAG | 3 cut(s) | 92, 159, 281 |
| GlaI | GCGC | 1 cut(s) | 479 |
| GluI | GCNGC | 6 cut(s) | 9, 390, 393, 396, 549, 552 |
| HhaI | GCGC | 1 cut(s) | 480 |
| Hin1II | CATG | 1 cut(s) | 151 |
| Hin6I | GCGC | 1 cut(s) | 478 |
| HinP1I | GCGC | 1 cut(s) | 478 |
| HinfI | GANTC | 1 cut(s) | 32 |
| HphI | GGTGA | 2 cut(s) | 41, 82 |
| Hpy166II | GTNNAC | 2 cut(s) | 73, 406 |
| Hpy188I | TCNGA | 1 cut(s) | 372 |
| Hpy188III | TCNNGA | 4 cut(s) | 92, 106, 337, 561 |
| Hpy8I | GTNNAC | 2 cut(s) | 73, 406 |
| Hpy99I | CGWCG | 2 cut(s) | 257, 567 |
| HpyAV | CCTTC | 3 cut(s) | 184, 200, 478 |
| HpyCH4IV | ACGT | 1 cut(s) | 230 |
| HpyCH4V | TGCA | 3 cut(s) | 140, 389, 551 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 14, 48, 362, 389, 395, 486 |
| HpyF3I | CTNAG | 4 cut(s) | 104, 183, 204, 544 |
| HpySE526I | ACGT | 1 cut(s) | 230 |
| Hsp92II | CATG | 1 cut(s) | 151 |
| HspAI | GCGC | 1 cut(s) | 478 |
| KpnI | GGTACC | 1 cut(s) | 129 |
| Kzo9I | GATC | 4 cut(s) | 108, 214, 339, 500 |
| LguI | GCTCTTC | 1 cut(s) | 372 |
| LmnI | GCTCC | 3 cut(s) | 14, 324, 494 |
| LpnPI | CCDG | 6 cut(s) | 91, 184, 254, 363, 467, 471 |
| Lsp1109I | GCAGC | 6 cut(s) | 20, 401, 404, 407, 535, 563 |
| LweI | GCATC | 2 cut(s) | 92, 489 |
| MaeI | CTAG | 3 cut(s) | 92, 159, 281 |
| MaeII | ACGT | 1 cut(s) | 230 |
| MalI | GATC | 4 cut(s) | 110, 216, 341, 502 |
| MboI | GATC | 4 cut(s) | 108, 214, 339, 500 |
| MboII | GAAGA | 6 cut(s) | 169, 209, 286, 334, 337, 359 |
| MflI | RGATCY | 1 cut(s) | 500 |
| MluCI | AATT | 6 cut(s) | 60, 247, 330, 436, 458, 495 |
| MlyI | GAGTC | 1 cut(s) | 41 |
| MmeI | TCCRAC | 1 cut(s) | 245 |
| MnlI | CCTC | 4 cut(s) | 59, 71, 394, 566 |
| MroXI | GAANNNNTTC | 1 cut(s) | 168 |
| MseI | TTAA | 2 cut(s) | 494, 533 |
| MslI | CAYNNNNRTG | 1 cut(s) | 356 |
| MspA1I | CMGCKG | 1 cut(s) | 548 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 14, 48, 362, 389, 395, 486 |
| NcoI | CCATGG | 1 cut(s) | 147 |
| NdeII | GATC | 4 cut(s) | 108, 214, 339, 500 |
| NlaIII | CATG | 1 cut(s) | 151 |
| NlaIV | GGNNCC | 4 cut(s) | 127, 154, 382, 490 |
| PaqCI | CACCTGC | 1 cut(s) | 368 |
| PciSI | GCTCTTC | 1 cut(s) | 372 |
| PdmI | GAANNNNTTC | 1 cut(s) | 168 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 62 |
| PkrI | GCNGC | 6 cut(s) | 10, 391, 394, 397, 550, 553 |
| PleI | GAGTC | 1 cut(s) | 40 |
| PpsI | GAGTC | 1 cut(s) | 40 |
| PspN4I | GGNNCC | 4 cut(s) | 127, 154, 382, 490 |
| PstI | CTGCAG | 2 cut(s) | 391, 553 |
| PsuI | RGATCY | 1 cut(s) | 500 |
| PvuII | CAGCTG | 1 cut(s) | 548 |
| RsaI | GTAC | 2 cut(s) | 127, 209 |
| RsaNI | GTAC | 2 cut(s) | 126, 208 |
| RseI | CAYNNNNRTG | 1 cut(s) | 356 |
| SapI | GCTCTTC | 1 cut(s) | 372 |
| SaqAI | TTAA | 2 cut(s) | 494, 533 |
| SatI | GCNGC | 6 cut(s) | 9, 390, 393, 396, 549, 552 |
| Sau3AI | GATC | 4 cut(s) | 108, 214, 339, 500 |
| SchI | GAGTC | 1 cut(s) | 41 |
| SetI | ASST | 7 cut(s) | 19, 27, 131, 233, 382, 400, 550 |
| SfaNI | GCATC | 2 cut(s) | 92, 489 |
| SfcI | CTRYAG | 2 cut(s) | 387, 549 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 356 |
| Sse9I | AATT | 6 cut(s) | 60, 247, 330, 436, 458, 495 |
| SspMI | CTAG | 3 cut(s) | 92, 159, 281 |
| StyI | CCWWGG | 3 cut(s) | 129, 147, 429 |
| TaiI | ACGT | 1 cut(s) | 233 |
| TaqI | TCGA | 2 cut(s) | 348, 562 |
| TasI | AATT | 6 cut(s) | 60, 247, 330, 436, 458, 495 |
| Tru1I | TTAA | 2 cut(s) | 494, 533 |
| Tru9I | TTAA | 2 cut(s) | 494, 533 |
| TseI | GCWGC | 6 cut(s) | 8, 389, 392, 395, 548, 551 |
| TspDTI | ATGAA | 2 cut(s) | 17, 88 |
| TspGWI | ACGGA | 1 cut(s) | 241 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 62 |
| XbaI | TCTAGA | 1 cut(s) | 91 |
| XmiI | GTMKAC | 1 cut(s) | 405 |
| XmnI | GAANNNNTTC | 1 cut(s) | 168 |
| XspI | CTAG | 3 cut(s) | 92, 159, 281 |