Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion (By similarity)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G15290 |
| fragaria_vesca | FvH4_4g31110 FvH4_6g48140 |
| malus_domestica | MD09G1053500.v1.1 MD13G1069600.v1.1 MD13G1069700.v1.1 MD16G1070000.v1.1 |
| prunus_persica | Prupe.1G277100_v2.0.a1 Prupe.1G277100_v2.0.a1 Prupe.3G264800_v2.0.a1 Prupe.3G264900_v2.0.a1 |
| pyrus_communis | pycom13g06250 pycom16g06100 |
| rosa_chinensis | RchiOBHm_Chr2g0167481 RchiOBHm_Chr4g0439491 |
| rosa_laevigata | RLG00000006266 RLG00000021723 |
| rosa_multiflora | Rmu_sc0001206.1_g000035 Rmu_sc0007276.1_g000008 Rmu_sc0043018.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00083450 Rroxscaffold_2G00083460 Rroxscaffold_5G00380400 |
| rosa_rugosa | Rorug02G0530500 Rorug04G0318700 Rorug04G0318800 |
| rosa_samantha | Rh2AG597700 Rh2AG597800 Rh2BG609200 Rh2BG609300 Rh2CG580100 Rh2CG580200 Rh2DG620500 Rh2DG620600 Rh4AG370000 Rh4BG382000 Rh4CG396600 Rh4DG376700 |
| rosa_wichuraiana | Rw2G049740 Rw4G031550 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 548 |
| Acc36I | ACCTGC | 1 cut(s) | 548 |
| Acc65I | GGTACC | 1 cut(s) | 305 |
| AccB1I | GGYRCC | 2 cut(s) | 305, 560 |
| AciI | CCGC | 3 cut(s) | 246, 570, 732 |
| AclWI | GGATC | 2 cut(s) | 19, 688 |
| AcoI | YGGCCR | 1 cut(s) | 567 |
| AcuI | CTGAAG | 2 cut(s) | 167, 356 |
| AfaI | GTAC | 2 cut(s) | 307, 587 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 245, 741 |
| AgsI | TTSAA | 3 cut(s) | 91, 234, 643 |
| AjnI | CCWGG | 1 cut(s) | 338 |
| AluBI | AGCT | 7 cut(s) | 194, 203, 211, 326, 464, 578, 728 |
| AluI | AGCT | 7 cut(s) | 194, 203, 211, 326, 464, 578, 728 |
| AlwI | GGATC | 2 cut(s) | 19, 688 |
| AoxI | GGCC | 1 cut(s) | 567 |
| ApeKI | GCWGC | 5 cut(s) | 194, 197, 200, 263, 728 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 56, 348 |
| Asp718I | GGTACC | 1 cut(s) | 305 |
| AsuHPI | GGTGA | 2 cut(s) | 227, 262 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 297, 330 |
| BanI | GGYRCC | 2 cut(s) | 305, 560 |
| BbsI | GAAGAC | 1 cut(s) | 25 |
| BbvI | GCAGC | 5 cut(s) | 181, 209, 212, 275, 715 |
| BccI | CCATC | 2 cut(s) | 275, 440 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 546, 580 |
| BciT130I | CCWGG | 1 cut(s) | 340 |
| BfaI | CTAG | 2 cut(s) | 173, 461 |
| BfmI | CTRYAG | 2 cut(s) | 195, 321 |
| BfuAI | ACCTGC | 1 cut(s) | 548 |
| BisI | GCNGC | 7 cut(s) | 195, 198, 201, 264, 570, 729, 732 |
| BlsI | GCNGC | 7 cut(s) | 196, 199, 202, 265, 571, 730, 733 |
| Bme1390I | CCNGG | 1 cut(s) | 340 |
| BmiI | GGNNCC | 4 cut(s) | 123, 307, 562, 623 |
| BmrFI | CCNGG | 1 cut(s) | 340 |
| BpiI | GAAGAC | 1 cut(s) | 25 |
| BsaJI | CCNNGG | 3 cut(s) | 339, 564, 609 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 113, 143 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 245, 741 |
| Bse1I | ACTGG | 2 cut(s) | 125, 623 |
| BseBI | CCWGG | 1 cut(s) | 340 |
| BseDI | CCNNGG | 3 cut(s) | 339, 564, 609 |
| BseGI | GGATG | 1 cut(s) | 267 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 245, 741 |
| BseMII | CTCAG | 1 cut(s) | 375 |
| BseNI | ACTGG | 2 cut(s) | 125, 623 |
| BseX3I | CGGCCG | 1 cut(s) | 567 |
| BseXI | GCAGC | 5 cut(s) | 181, 209, 212, 275, 715 |
| Bsh1285I | CGRYCG | 1 cut(s) | 570 |
| BshFI | GGCC | 1 cut(s) | 569 |
| BshNI | GGYRCC | 2 cut(s) | 305, 560 |
| BsiEI | CGRYCG | 1 cut(s) | 570 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 245, 741 |
| BsmI | GAATGC | 2 cut(s) | 543, 610 |
| BsnI | GGCC | 1 cut(s) | 569 |
| Bsp143I | GATC | 5 cut(s) | 11, 394, 519, 680, 714 |
| BspACI | CCGC | 3 cut(s) | 246, 570, 732 |
| BspANI | GGCC | 1 cut(s) | 569 |
| BspCNI | CTCAG | 1 cut(s) | 376 |
| BspLI | GGNNCC | 4 cut(s) | 123, 307, 562, 623 |
| BspMAI | CTGCAG | 1 cut(s) | 199 |
| BspMI | ACCTGC | 1 cut(s) | 548 |
| BspPI | GGATC | 2 cut(s) | 19, 688 |
| BspQI | GCTCTTC | 1 cut(s) | 552 |
| BspT107I | GGYRCC | 2 cut(s) | 305, 560 |
| BsrI | ACTGG | 2 cut(s) | 125, 623 |
| BssECI | CCNNGG | 3 cut(s) | 339, 564, 609 |
| BssMI | GATC | 5 cut(s) | 11, 394, 519, 680, 714 |
| BssT1I | CCWWGG | 1 cut(s) | 609 |
| Bst2UI | CCWGG | 1 cut(s) | 340 |
| Bst4CI | ACNGT | 3 cut(s) | 102, 366, 506 |
| Bst6I | CTCTTC | 2 cut(s) | 42, 552 |
| BstC8I | GCNNGC | 1 cut(s) | 543 |
| BstDEI | CTNAG | 4 cut(s) | 284, 310, 384, 589 |
| BstF5I | GGATG | 1 cut(s) | 267 |
| BstKTI | GATC | 5 cut(s) | 14, 397, 522, 683, 717 |
| BstMBI | GATC | 5 cut(s) | 11, 394, 519, 680, 714 |
| BstMCI | CGRYCG | 1 cut(s) | 570 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 200, 569, 575 |
| BstNI | CCWGG | 1 cut(s) | 340 |
| BstSCI | CCNGG | 1 cut(s) | 338 |
| BstSFI | CTRYAG | 2 cut(s) | 195, 321 |
| BstV1I | GCAGC | 5 cut(s) | 181, 209, 212, 275, 715 |
| BstV2I | GAAGAC | 1 cut(s) | 25 |
| BstX2I | RGATCY | 1 cut(s) | 680 |
| BstYI | RGATCY | 1 cut(s) | 680 |
| BstZI | CGGCCG | 1 cut(s) | 567 |
| BsuRI | GGCC | 1 cut(s) | 569 |
| BtsCI | GGATG | 1 cut(s) | 267 |
| BtsIMutI | CAGTG | 2 cut(s) | 107, 132 |
| BveI | ACCTGC | 1 cut(s) | 548 |
| Cac8I | GCNNGC | 1 cut(s) | 543 |
| Csp6I | GTAC | 2 cut(s) | 306, 586 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 562, 597 |
| CviAII | CATG | 1 cut(s) | 65 |
| CviQI | GTAC | 2 cut(s) | 306, 586 |
| DdeI | CTNAG | 4 cut(s) | 284, 310, 384, 589 |
| DpnI | GATC | 5 cut(s) | 13, 396, 521, 682, 716 |
| DpnII | GATC | 5 cut(s) | 11, 394, 519, 680, 714 |
| EaeI | YGGCCR | 1 cut(s) | 567 |
| EagI | CGGCCG | 1 cut(s) | 567 |
| Eam1104I | CTCTTC | 2 cut(s) | 42, 552 |
| EarI | CTCTTC | 2 cut(s) | 42, 552 |
| EclXI | CGGCCG | 1 cut(s) | 567 |
| Eco130I | CCWWGG | 1 cut(s) | 609 |
| Eco52I | CGGCCG | 1 cut(s) | 567 |
| Eco57I | CTGAAG | 2 cut(s) | 167, 356 |
| EcoRII | CCWGG | 1 cut(s) | 338 |
| EcoT14I | CCWWGG | 1 cut(s) | 609 |
| ErhI | CCWWGG | 1 cut(s) | 609 |
| FaeI | CATG | 1 cut(s) | 68 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 337, 369 |
| FatI | CATG | 1 cut(s) | 64 |
| FauI | CCCGC | 1 cut(s) | 239 |
| Fnu4HI | GCNGC | 7 cut(s) | 195, 198, 201, 264, 570, 729, 732 |
| FokI | GGATG | 1 cut(s) | 254 |
| Fsp4HI | GCNGC | 7 cut(s) | 195, 198, 201, 264, 570, 729, 732 |
| FspBI | CTAG | 2 cut(s) | 173, 461 |
| GluI | GCNGC | 7 cut(s) | 195, 198, 201, 264, 570, 729, 732 |
| HaeIII | GGCC | 1 cut(s) | 569 |
| Hin1II | CATG | 1 cut(s) | 68 |
| HincII | GTYRAC | 1 cut(s) | 635 |
| HindII | GTYRAC | 1 cut(s) | 635 |
| HinfI | GANTC | 2 cut(s) | 218, 660 |
| HphI | GGTGA | 2 cut(s) | 227, 262 |
| Hpy166II | GTNNAC | 4 cut(s) | 98, 253, 586, 635 |
| Hpy188I | TCNGA | 3 cut(s) | 137, 450, 552 |
| Hpy188III | TCNNGA | 2 cut(s) | 517, 712 |
| Hpy8I | GTNNAC | 4 cut(s) | 98, 253, 586, 635 |
| HpyAV | CCTTC | 4 cut(s) | 142, 181, 380, 658 |
| HpyCH4III | ACNGT | 3 cut(s) | 102, 366, 506 |
| HpyCH4IV | ACGT | 3 cut(s) | 78, 153, 410 |
| HpyCH4V | TGCA | 3 cut(s) | 64, 197, 497 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 200, 569, 575 |
| HpyF3I | CTNAG | 4 cut(s) | 284, 310, 384, 589 |
| HpySE526I | ACGT | 3 cut(s) | 78, 153, 410 |
| Hsp92II | CATG | 1 cut(s) | 68 |
| KpnI | GGTACC | 1 cut(s) | 309 |
| Kzo9I | GATC | 5 cut(s) | 11, 394, 519, 680, 714 |
| LguI | GCTCTTC | 1 cut(s) | 552 |
| LmnI | GCTCC | 2 cut(s) | 121, 191 |
| LpnPI | CCDG | 8 cut(s) | 74, 138, 325, 352, 527, 543, 604, 651 |
| Lsp1109I | GCAGC | 5 cut(s) | 181, 209, 212, 275, 715 |
| MaeI | CTAG | 2 cut(s) | 173, 461 |
| MaeII | ACGT | 3 cut(s) | 78, 153, 410 |
| MalI | GATC | 5 cut(s) | 13, 396, 521, 682, 716 |
| MboI | GATC | 5 cut(s) | 11, 394, 519, 680, 714 |
| MboII | GAAGA | 7 cut(s) | 25, 59, 389, 466, 514, 517, 539 |
| MfeI | CAATTG | 1 cut(s) | 693 |
| MflI | RGATCY | 1 cut(s) | 680 |
| MluCI | AATT | 5 cut(s) | 106, 427, 638, 643, 693 |
| MlyI | GAGTC | 1 cut(s) | 227 |
| MmeI | TCCRAC | 1 cut(s) | 425 |
| MnlI | CCTC | 6 cut(s) | 22, 34, 67, 251, 281, 574 |
| MroXI | GAANNNNTTC | 2 cut(s) | 56, 348 |
| MseI | TTAA | 1 cut(s) | 719 |
| MslI | CAYNNNNRTG | 1 cut(s) | 536 |
| MspA1I | CMGCKG | 1 cut(s) | 728 |
| MspR9I | CCNGG | 1 cut(s) | 340 |
| MunI | CAATTG | 1 cut(s) | 693 |
| Mva1269I | GAATGC | 2 cut(s) | 543, 610 |
| MvaI | CCWGG | 1 cut(s) | 340 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 200, 569, 575 |
| NdeII | GATC | 5 cut(s) | 11, 394, 519, 680, 714 |
| NlaIII | CATG | 1 cut(s) | 68 |
| NlaIV | GGNNCC | 4 cut(s) | 123, 307, 562, 623 |
| NmeAIII | GCCGAG | 2 cut(s) | 545, 721 |
| PaqCI | CACCTGC | 1 cut(s) | 548 |
| PciSI | GCTCTTC | 1 cut(s) | 552 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 42 |
| PctI | GAATGC | 2 cut(s) | 543, 610 |
| PdmI | GAANNNNTTC | 2 cut(s) | 56, 348 |
| PfeI | GAWTC | 1 cut(s) | 660 |
| PkrI | GCNGC | 7 cut(s) | 196, 199, 202, 265, 571, 730, 733 |
| PleI | GAGTC | 1 cut(s) | 226 |
| PpsI | GAGTC | 1 cut(s) | 226 |
| Psp6I | CCWGG | 1 cut(s) | 338 |
| PspGI | CCWGG | 1 cut(s) | 338 |
| PspN4I | GGNNCC | 4 cut(s) | 123, 307, 562, 623 |
| PstI | CTGCAG | 1 cut(s) | 199 |
| PsuI | RGATCY | 1 cut(s) | 680 |
| PvuII | CAGCTG | 1 cut(s) | 728 |
| RsaI | GTAC | 2 cut(s) | 307, 587 |
| RsaNI | GTAC | 2 cut(s) | 306, 586 |
| RseI | CAYNNNNRTG | 1 cut(s) | 536 |
| SapI | GCTCTTC | 1 cut(s) | 552 |
| SaqAI | TTAA | 1 cut(s) | 719 |
| SatI | GCNGC | 7 cut(s) | 195, 198, 201, 264, 570, 729, 732 |
| Sau3AI | GATC | 5 cut(s) | 11, 394, 519, 680, 714 |
| SchI | GAGTC | 1 cut(s) | 227 |
| ScrFI | CCNGG | 1 cut(s) | 340 |
| SfcI | CTRYAG | 2 cut(s) | 195, 321 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 536 |
| Sse9I | AATT | 5 cut(s) | 106, 427, 638, 643, 693 |
| SsiI | CCGC | 3 cut(s) | 246, 570, 732 |
| SspMI | CTAG | 2 cut(s) | 173, 461 |
| StyD4I | CCNGG | 1 cut(s) | 338 |
| StyI | CCWWGG | 1 cut(s) | 609 |
| TaaI | ACNGT | 3 cut(s) | 102, 366, 506 |
| TaiI | ACGT | 3 cut(s) | 81, 156, 413 |
| TaqI | TCGA | 3 cut(s) | 36, 273, 528 |
| TasI | AATT | 5 cut(s) | 106, 427, 638, 643, 693 |
| TatI | WGTACW | 1 cut(s) | 585 |
| TauI | GCSGC | 2 cut(s) | 572, 734 |
| TfiI | GAWTC | 1 cut(s) | 660 |
| Tru1I | TTAA | 1 cut(s) | 719 |
| Tru9I | TTAA | 1 cut(s) | 719 |
| TscAI | CASTG | 2 cut(s) | 107, 132 |
| TseI | GCWGC | 5 cut(s) | 194, 197, 200, 263, 728 |
| TspDTI | ATGAA | 2 cut(s) | 200, 268 |
| TspRI | CASTG | 2 cut(s) | 107, 132 |
| XmnI | GAANNNNTTC | 2 cut(s) | 56, 348 |
| XspI | CTAG | 2 cut(s) | 173, 461 |