Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion (By similarity)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G15290 |
| fragaria_vesca | FvH4_4g31110 FvH4_6g48140 |
| malus_domestica | MD09G1053500.v1.1 MD13G1069600.v1.1 MD13G1069700.v1.1 MD16G1070000.v1.1 |
| prunus_persica | Prupe.1G277100_v2.0.a1 Prupe.1G277100_v2.0.a1 Prupe.3G264800_v2.0.a1 Prupe.3G264900_v2.0.a1 |
| pyrus_communis | pycom13g06250 pycom16g06100 |
| rosa_chinensis | RchiOBHm_Chr2g0167481 RchiOBHm_Chr4g0439491 |
| rosa_laevigata | RLG00000006266 RLG00000021723 |
| rosa_multiflora | Rmu_sc0001206.1_g000035 Rmu_sc0007276.1_g000008 Rmu_sc0043018.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00083450 Rroxscaffold_2G00083460 Rroxscaffold_5G00380400 |
| rosa_rugosa | Rorug02G0530500 Rorug04G0318700 Rorug04G0318800 |
| rosa_samantha | Rh2AG597700 Rh2AG597800 Rh2BG609200 Rh2BG609300 Rh2CG580100 Rh2CG580200 Rh2DG620500 Rh2DG620600 Rh4AG370000 Rh4BG382000 Rh4CG396600 Rh4DG376700 |
| rosa_wichuraiana | Rw2G049740 Rw4G031550 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 266 |
| Acc36I | ACCTGC | 1 cut(s) | 266 |
| Acc65I | GGTACC | 1 cut(s) | 122 |
| AccB1I | GGYRCC | 2 cut(s) | 122, 278 |
| AciI | CCGC | 3 cut(s) | 63, 288, 450 |
| AclWI | GGATC | 1 cut(s) | 406 |
| AcoI | YGGCCR | 1 cut(s) | 285 |
| AcuI | CTGAAG | 1 cut(s) | 173 |
| AfaI | GTAC | 2 cut(s) | 124, 305 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 62, 459 |
| AgsI | TTSAA | 2 cut(s) | 51, 361 |
| AjnI | CCWGG | 1 cut(s) | 155 |
| AluBI | AGCT | 6 cut(s) | 11, 20, 28, 143, 296, 446 |
| AluI | AGCT | 6 cut(s) | 11, 20, 28, 143, 296, 446 |
| AlwI | GGATC | 1 cut(s) | 406 |
| AoxI | GGCC | 2 cut(s) | 198, 285 |
| ApeKI | GCWGC | 5 cut(s) | 11, 14, 17, 80, 446 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 165 |
| Asp718I | GGTACC | 1 cut(s) | 122 |
| AspS9I | GGNCC | 1 cut(s) | 198 |
| AsuHPI | GGTGA | 2 cut(s) | 44, 79 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 114, 147 |
| BanI | GGYRCC | 2 cut(s) | 122, 278 |
| BbvI | GCAGC | 4 cut(s) | 26, 29, 92, 433 |
| BccI | CCATC | 2 cut(s) | 92, 257 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 264, 298 |
| BciT130I | CCWGG | 1 cut(s) | 157 |
| BfmI | CTRYAG | 2 cut(s) | 12, 138 |
| BfuAI | ACCTGC | 1 cut(s) | 266 |
| BisI | GCNGC | 7 cut(s) | 12, 15, 18, 81, 288, 447, 450 |
| BlsI | GCNGC | 7 cut(s) | 13, 16, 19, 82, 289, 448, 451 |
| Bme1390I | CCNGG | 1 cut(s) | 157 |
| BmgT120I | GGNCC | 1 cut(s) | 198 |
| BmiI | GGNNCC | 2 cut(s) | 124, 280 |
| BmrFI | CCNGG | 1 cut(s) | 157 |
| BsaJI | CCNNGG | 3 cut(s) | 156, 282, 327 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 62, 459 |
| Bse1I | ACTGG | 1 cut(s) | 341 |
| BseBI | CCWGG | 1 cut(s) | 157 |
| BseDI | CCNNGG | 3 cut(s) | 156, 282, 327 |
| BseGI | GGATG | 1 cut(s) | 84 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 62, 459 |
| BseNI | ACTGG | 1 cut(s) | 341 |
| BseX3I | CGGCCG | 1 cut(s) | 285 |
| BseXI | GCAGC | 4 cut(s) | 26, 29, 92, 433 |
| Bsh1285I | CGRYCG | 1 cut(s) | 288 |
| BshFI | GGCC | 2 cut(s) | 200, 287 |
| BshNI | GGYRCC | 2 cut(s) | 122, 278 |
| BsiEI | CGRYCG | 1 cut(s) | 288 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 62, 459 |
| BsmI | GAATGC | 2 cut(s) | 261, 328 |
| BsnI | GGCC | 2 cut(s) | 200, 287 |
| Bsp143I | GATC | 3 cut(s) | 211, 398, 432 |
| BspACI | CCGC | 3 cut(s) | 63, 288, 450 |
| BspANI | GGCC | 2 cut(s) | 200, 287 |
| BspLI | GGNNCC | 2 cut(s) | 124, 280 |
| BspMAI | CTGCAG | 1 cut(s) | 16 |
| BspMI | ACCTGC | 1 cut(s) | 266 |
| BspPI | GGATC | 1 cut(s) | 406 |
| BspQI | GCTCTTC | 1 cut(s) | 270 |
| BspT107I | GGYRCC | 2 cut(s) | 122, 278 |
| BsrI | ACTGG | 1 cut(s) | 341 |
| BssECI | CCNNGG | 3 cut(s) | 156, 282, 327 |
| BssMI | GATC | 3 cut(s) | 211, 398, 432 |
| BssT1I | CCWWGG | 1 cut(s) | 327 |
| Bst2UI | CCWGG | 1 cut(s) | 157 |
| Bst4CI | ACNGT | 1 cut(s) | 183 |
| Bst6I | CTCTTC | 1 cut(s) | 270 |
| BstC8I | GCNNGC | 1 cut(s) | 261 |
| BstDEI | CTNAG | 3 cut(s) | 101, 127, 307 |
| BstF5I | GGATG | 1 cut(s) | 84 |
| BstKTI | GATC | 3 cut(s) | 214, 401, 435 |
| BstMBI | GATC | 3 cut(s) | 211, 398, 432 |
| BstMCI | CGRYCG | 1 cut(s) | 288 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 17, 287, 293 |
| BstNI | CCWGG | 1 cut(s) | 157 |
| BstSCI | CCNGG | 1 cut(s) | 155 |
| BstSFI | CTRYAG | 2 cut(s) | 12, 138 |
| BstV1I | GCAGC | 4 cut(s) | 26, 29, 92, 433 |
| BstX2I | RGATCY | 1 cut(s) | 398 |
| BstYI | RGATCY | 1 cut(s) | 398 |
| BstZI | CGGCCG | 1 cut(s) | 285 |
| BsuRI | GGCC | 2 cut(s) | 200, 287 |
| BtsCI | GGATG | 1 cut(s) | 84 |
| BveI | ACCTGC | 1 cut(s) | 266 |
| Cac8I | GCNNGC | 1 cut(s) | 261 |
| Cfr13I | GGNCC | 1 cut(s) | 198 |
| Csp6I | GTAC | 2 cut(s) | 123, 304 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 280, 315 |
| CviQI | GTAC | 2 cut(s) | 123, 304 |
| DdeI | CTNAG | 3 cut(s) | 101, 127, 307 |
| DpnI | GATC | 3 cut(s) | 213, 400, 434 |
| DpnII | GATC | 3 cut(s) | 211, 398, 432 |
| EaeI | YGGCCR | 1 cut(s) | 285 |
| EagI | CGGCCG | 1 cut(s) | 285 |
| Eam1104I | CTCTTC | 1 cut(s) | 270 |
| EarI | CTCTTC | 1 cut(s) | 270 |
| EclXI | CGGCCG | 1 cut(s) | 285 |
| Eco130I | CCWWGG | 1 cut(s) | 327 |
| Eco52I | CGGCCG | 1 cut(s) | 285 |
| Eco57I | CTGAAG | 1 cut(s) | 173 |
| EcoRII | CCWGG | 1 cut(s) | 155 |
| EcoT14I | CCWWGG | 1 cut(s) | 327 |
| ErhI | CCWWGG | 1 cut(s) | 327 |
| FaiI | YATR | 3 cut(s) | 140, 146, 207 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 154, 186 |
| FauI | CCCGC | 1 cut(s) | 56 |
| Fnu4HI | GCNGC | 7 cut(s) | 12, 15, 18, 81, 288, 447, 450 |
| FokI | GGATG | 1 cut(s) | 71 |
| Fsp4HI | GCNGC | 7 cut(s) | 12, 15, 18, 81, 288, 447, 450 |
| GluI | GCNGC | 7 cut(s) | 12, 15, 18, 81, 288, 447, 450 |
| HaeIII | GGCC | 2 cut(s) | 200, 287 |
| HinfI | GANTC | 2 cut(s) | 35, 378 |
| HphI | GGTGA | 2 cut(s) | 44, 79 |
| Hpy166II | GTNNAC | 2 cut(s) | 70, 304 |
| Hpy188I | TCNGA | 2 cut(s) | 254, 270 |
| Hpy188III | TCNNGA | 1 cut(s) | 430 |
| Hpy8I | GTNNAC | 2 cut(s) | 70, 304 |
| HpyAV | CCTTC | 2 cut(s) | 197, 376 |
| HpyCH4III | ACNGT | 1 cut(s) | 183 |
| HpyCH4IV | ACGT | 1 cut(s) | 227 |
| HpyCH4V | TGCA | 1 cut(s) | 14 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 17, 287, 293 |
| HpyF3I | CTNAG | 3 cut(s) | 101, 127, 307 |
| HpySE526I | ACGT | 1 cut(s) | 227 |
| KpnI | GGTACC | 1 cut(s) | 126 |
| Kzo9I | GATC | 3 cut(s) | 211, 398, 432 |
| LguI | GCTCTTC | 1 cut(s) | 270 |
| LmnI | GCTCC | 1 cut(s) | 8 |
| LpnPI | CCDG | 6 cut(s) | 142, 169, 245, 261, 322, 369 |
| Lsp1109I | GCAGC | 4 cut(s) | 26, 29, 92, 433 |
| MaeII | ACGT | 1 cut(s) | 227 |
| MalI | GATC | 3 cut(s) | 213, 400, 434 |
| MboI | GATC | 3 cut(s) | 211, 398, 432 |
| MboII | GAAGA | 2 cut(s) | 206, 257 |
| MfeI | CAATTG | 1 cut(s) | 411 |
| MflI | RGATCY | 1 cut(s) | 398 |
| MluCI | AATT | 4 cut(s) | 244, 356, 361, 411 |
| MlyI | GAGTC | 1 cut(s) | 44 |
| MmeI | TCCRAC | 1 cut(s) | 242 |
| MnlI | CCTC | 3 cut(s) | 68, 98, 292 |
| MroXI | GAANNNNTTC | 1 cut(s) | 165 |
| MseI | TTAA | 1 cut(s) | 437 |
| MslI | CAYNNNNRTG | 1 cut(s) | 254 |
| MspA1I | CMGCKG | 1 cut(s) | 446 |
| MspR9I | CCNGG | 1 cut(s) | 157 |
| MunI | CAATTG | 1 cut(s) | 411 |
| Mva1269I | GAATGC | 2 cut(s) | 261, 328 |
| MvaI | CCWGG | 1 cut(s) | 157 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 17, 287, 293 |
| NdeII | GATC | 3 cut(s) | 211, 398, 432 |
| NlaIV | GGNNCC | 2 cut(s) | 124, 280 |
| NmeAIII | GCCGAG | 3 cut(s) | 226, 263, 439 |
| PaqCI | CACCTGC | 1 cut(s) | 266 |
| PciSI | GCTCTTC | 1 cut(s) | 270 |
| PctI | GAATGC | 2 cut(s) | 261, 328 |
| PdmI | GAANNNNTTC | 1 cut(s) | 165 |
| PfeI | GAWTC | 1 cut(s) | 378 |
| PkrI | GCNGC | 7 cut(s) | 13, 16, 19, 82, 289, 448, 451 |
| PleI | GAGTC | 1 cut(s) | 43 |
| PpsI | GAGTC | 1 cut(s) | 43 |
| Psp6I | CCWGG | 1 cut(s) | 155 |
| PspGI | CCWGG | 1 cut(s) | 155 |
| PspN4I | GGNNCC | 2 cut(s) | 124, 280 |
| PspPI | GGNCC | 1 cut(s) | 198 |
| PstI | CTGCAG | 1 cut(s) | 16 |
| PsuI | RGATCY | 1 cut(s) | 398 |
| PvuII | CAGCTG | 1 cut(s) | 446 |
| RsaI | GTAC | 2 cut(s) | 124, 305 |
| RsaNI | GTAC | 2 cut(s) | 123, 304 |
| RseI | CAYNNNNRTG | 1 cut(s) | 254 |
| SapI | GCTCTTC | 1 cut(s) | 270 |
| SaqAI | TTAA | 1 cut(s) | 437 |
| SatI | GCNGC | 7 cut(s) | 12, 15, 18, 81, 288, 447, 450 |
| Sau3AI | GATC | 3 cut(s) | 211, 398, 432 |
| Sau96I | GGNCC | 1 cut(s) | 198 |
| SchI | GAGTC | 1 cut(s) | 44 |
| ScrFI | CCNGG | 1 cut(s) | 157 |
| SetI | ASST | 9 cut(s) | 13, 22, 30, 128, 145, 230, 280, 298, 448 |
| SfcI | CTRYAG | 2 cut(s) | 12, 138 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 254 |
| Sse9I | AATT | 4 cut(s) | 244, 356, 361, 411 |
| SsiI | CCGC | 3 cut(s) | 63, 288, 450 |
| StyD4I | CCNGG | 1 cut(s) | 155 |
| StyI | CCWWGG | 1 cut(s) | 327 |
| TaaI | ACNGT | 1 cut(s) | 183 |
| TaiI | ACGT | 1 cut(s) | 230 |
| TaqI | TCGA | 1 cut(s) | 90 |
| TasI | AATT | 4 cut(s) | 244, 356, 361, 411 |
| TatI | WGTACW | 1 cut(s) | 303 |
| TauI | GCSGC | 2 cut(s) | 290, 452 |
| TfiI | GAWTC | 1 cut(s) | 378 |
| Tru1I | TTAA | 1 cut(s) | 437 |
| Tru9I | TTAA | 1 cut(s) | 437 |
| TseI | GCWGC | 5 cut(s) | 11, 14, 17, 80, 446 |
| TspDTI | ATGAA | 2 cut(s) | 17, 85 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 256 |
| XmnI | GAANNNNTTC | 1 cut(s) | 165 |