Prupe.3G283700_v2.0.a1

Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
25763348 .. 25767721
4374 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G283700.3

Sequence Viewer

Length: 1416 bp
ATGGGTGCTTACAACAACGACGGCGTTTTGTCGCCGATATACAGTCTCGGTTCCTCCCACGACGTCAGAATCTCCAAGCACGTCCACGATAATGTCCATGGCAACATTTACCTTGATCCGCTCTCTGTGAAGTTCATCGATACCGAGGAGTTTCAGAGGCTTCGTGAACTCAAACAACTGGGCGTCACGCACATGGTTTATCCAGGGGGAGTACATTCCAGATTCGAGCATTCGCTTGGCGTCTATTGGCTTGCTGGTGAAGCTGTTCAGAAGCTAAAAAATTATCAGGGCTCGGACCTTGATATTGACCGCTTTGATCTCCAGACCGTAAAAATTGCAGGACTTTTGCATGATGTTGGCCATGGGCCTTTCAGTCACTTGTTTGAACGCGAGTTTCTTCCCCAAGTACGGAATGGTTTCCATTGGTCTCATGAGGATATGTCAGTGAAGATGGTTGACCACATTGTTAATCAGCATCATATTGATATTGACCGTGAGATGATTAAAAGAGTTAAGGAGATGATACTGGCCAGCTCTGAATTTGCAATGCCAAGAAGCTCAAGGGAGAAGCATTTTCTGTATGAAATTGTTGCAAATGGCCGTAATGGAATTGATGTGGACAAGTTTGATTATATTGTCCGTGACTGCCGCGCTTGTGGGCTGGGATGTAACTTTGAGTTTCAAAGATTAATGGAGACAATGCGGGTTATGGATGATGAGATCTGCTATCGTGCCAAAGATTATCTCACTGTCCACAAGTTATTTGCTACTCGAGCTGATTTGTATCGAACAGTTTATACACATCCAAAAGTAAAGGCCATAGAGCTTATGGTGGTTGATGCCCTGGTGAAAGCAAATGATTATCTAGACATTGCCTCTCACATTGAGGATCCCTCTCAATACTGGAAGTTAGATGACACCATTATTAGAACTATTGAGACAGCTCCAAATGAAGAACTAAAGGAAGCTAGGGACTTAATCCTGCGGATTAGGAGGAGAAATCTTTATCAGTTCTGCAATGAGTATGCTGTACCCAAGGATAAAATGGAAAATTTCAAAAATGTCACCGCTCAAGATATTGTTTGTTCTCAGAAAAGTGGAGTGACATTGAAAGAGGAGGATGTTGCTGTTTGCAACGTCAGGATTGATTTGACTCGTGGGAGACATAGTCCTCTTGAAAGTATCAACTTTTTCCAGGATTATGACAGTGAGGAGAAATTCACTATACGTGAGGACCACATTAGTCACTTGCTGCCTACATCATATCAAGATATGTTAGTGAGGGTGTACTCCAAAAAGCCTGAGCTGGTTGGAGCAATTTCTGAGGCTTTTGAAAACTTTCAGTTAAAAACATATGGGGTCAAGGCACAAGTACACGCAACACCAGAGAAAAAGAAACGTCGCATCTTATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

472

Amino Acids

54.72

Weight (kDa)

6.3

Isoelectric Point (pI)

37.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 66
AccBSI CCGCTC 2 cut(s) 121, 1070
AccII CGCG 2 cut(s) 390, 651
AciI CCGC 6 cut(s) 119, 310, 649, 703, 985, 1068
AclWI GGATC 3 cut(s) 110, 884, 897
AcoI YGGCCR 3 cut(s) 358, 528, 598
AcsI RAATTY 3 cut(s) 539, 1051, 1217
AcyI GRCGYC 3 cut(s) 63, 183, 240
AfaI GTAC 5 cut(s) 213, 408, 1032, 1289, 1374
AfiI CCNNNNNNNGG 1 cut(s) 408
AgsI TTSAA 6 cut(s) 386, 683, 1057, 1111, 1178, 1334
AjiI CACGTC 1 cut(s) 82
AjnI CCWGG 3 cut(s) 202, 843, 1194
AluBI AGCT 9 cut(s) 263, 274, 534, 558, 776, 826, 944, 968, 1306
AluI AGCT 9 cut(s) 263, 274, 534, 558, 776, 826, 944, 968, 1306
Alw26I GTCTC 5 cut(s) 50, 432, 689, 932, 1156
AlwI GGATC 3 cut(s) 110, 884, 897
Ama87I CYCGRG 1 cut(s) 771
AoxI GGCC 5 cut(s) 358, 365, 528, 598, 816
ApeKI GCWGC 1 cut(s) 1252
ApoI RAATTY 3 cut(s) 539, 1051, 1217
AseI ATTAAT 1 cut(s) 689
Asp700I GAANNNNTTC 3 cut(s) 264, 416, 1338
AspLEI GCGC 1 cut(s) 653
AspS9I GGNCC 3 cut(s) 295, 365, 1234
AsuHPI GGTGA 3 cut(s) 269, 859, 1057
AvaI CYCGRG 1 cut(s) 771
AvaII GGWCC 2 cut(s) 295, 1234
BalI TGGCCA 2 cut(s) 360, 530
BamHI GGATCC 1 cut(s) 889
BanII GRGCYC 1 cut(s) 293
BauI CACGAG 1 cut(s) 1155
BbvI GCAGC 1 cut(s) 1239
BccI CCATC 1 cut(s) 445
BceAI ACGGC 2 cut(s) 37, 585
BciT130I CCWGG 3 cut(s) 204, 845, 1196
BcoDI GTCTC 5 cut(s) 50, 432, 689, 932, 1156
BfaI CTAG 2 cut(s) 866, 969
BglII AGATCT 1 cut(s) 720
BisI GCNGC 2 cut(s) 649, 1253
BlsI GCNGC 2 cut(s) 650, 1254
Bme1390I CCNGG 3 cut(s) 204, 845, 1196
Bme18I GGWCC 2 cut(s) 295, 1234
BmeT110I CYCGRG 1 cut(s) 771
BmgBI CACGTC 1 cut(s) 82
BmgT120I GGNCC 3 cut(s) 295, 365, 1234
BmiI GGNNCC 2 cut(s) 52, 891
BmrFI CCNGG 3 cut(s) 204, 845, 1196
BmrI ACTGGG 1 cut(s) 188
BmsI GCATC 2 cut(s) 484, 829
BmuI ACTGGG 1 cut(s) 188
BplI GAGNNNNNCTC 2 cut(s) 878, 910
BpmI CTGGAG 1 cut(s) 305
Bpu10I CCTNAGC 1 cut(s) 1302
BpuEI CTTGAG 2 cut(s) 544, 1056
Bsa29I ATCGAT 1 cut(s) 138
BsaAI YACGTR 1 cut(s) 1229
BsaBI GATNNNNATC 1 cut(s) 783
BsaHI GRCGYC 3 cut(s) 63, 183, 240
BsaI GGTCTC 1 cut(s) 432
BsaJI CCNNGG 6 cut(s) 97, 144, 203, 361, 843, 1035
BsaXI ACNNNNNCTCC 2 cut(s) 1153, 1183
Bsc4I CCNNNNNNNGG 1 cut(s) 408
Bse1I ACTGG 3 cut(s) 183, 531, 908
Bse3DI GCAATG 3 cut(s) 552, 870, 1024
Bse8I GATNNNNATC 1 cut(s) 783
BseBI CCWGG 3 cut(s) 204, 845, 1196
BseCI ATCGAT 1 cut(s) 138
BseDI CCNNGG 6 cut(s) 97, 144, 203, 361, 843, 1035
BseGI GGATG 4 cut(s) 671, 718, 802, 1126
BseJI GATNNNNATC 1 cut(s) 783
BseLI CCNNNNNNNGG 1 cut(s) 408
BseMI GCAATG 3 cut(s) 552, 870, 1024
BseMII CTCAG 3 cut(s) 1103, 1293, 1314
BseNI ACTGG 3 cut(s) 183, 531, 908
BseRI GAGGAG 4 cut(s) 161, 1009, 1130, 1226
BseXI GCAGC 1 cut(s) 1239
BseYI CCCAGC 1 cut(s) 661
Bsh1236I CGCG 2 cut(s) 390, 651
BshFI GGCC 5 cut(s) 360, 367, 530, 600, 818
BshVI ATCGAT 1 cut(s) 138
BsiHKCI CYCGRG 1 cut(s) 771
BslFI GGGAC 1 cut(s) 986
BslI CCNNNNNNNGG 1 cut(s) 408
BsmAI GTCTC 5 cut(s) 50, 432, 689, 932, 1156
BsmFI GGGAC 1 cut(s) 986
BsmI GAATGC 1 cut(s) 229
BsnI GGCC 5 cut(s) 360, 367, 530, 600, 818
Bso31I GGTCTC 1 cut(s) 432
BsoBI CYCGRG 1 cut(s) 771
Bsp1286I GDGCHC 1 cut(s) 293
Bsp143I GATC 4 cut(s) 115, 316, 720, 889
Bsp19I CCATGG 2 cut(s) 97, 361
BspACI CCGC 6 cut(s) 119, 310, 649, 703, 985, 1068
BspANI GGCC 5 cut(s) 360, 367, 530, 600, 818
BspCNI CTCAG 3 cut(s) 1102, 1294, 1315
BspDI ATCGAT 1 cut(s) 138
BspFNI CGCG 2 cut(s) 390, 651
BspHI TCATGA 2 cut(s) 430, 1412
BspLI GGNNCC 2 cut(s) 52, 891
BspPI GGATC 3 cut(s) 110, 884, 897
BspTNI GGTCTC 1 cut(s) 432
BsrBI CCGCTC 2 cut(s) 121, 1070
BsrDI GCAATG 3 cut(s) 552, 870, 1024
BsrI ACTGG 3 cut(s) 183, 531, 908
BssECI CCNNGG 6 cut(s) 97, 144, 203, 361, 843, 1035
BssMI GATC 4 cut(s) 115, 316, 720, 889
BssNI GRCGYC 3 cut(s) 63, 183, 240
BssSI CACGAG 1 cut(s) 1155
BssT1I CCWWGG 3 cut(s) 97, 361, 1035
Bst2BI CACGAG 1 cut(s) 1155
Bst2UI CCWGG 3 cut(s) 204, 845, 1196
Bst4CI ACNGT 6 cut(s) 44, 328, 494, 751, 793, 1208
BstACI GRCGYC 3 cut(s) 63, 183, 240
BstBAI YACGTR 1 cut(s) 1229
BstC8I GCNNGC 2 cut(s) 252, 532
BstDEI CTNAG 3 cut(s) 1089, 1302, 1323
BstDSI CCRYGG 2 cut(s) 97, 361
BstF5I GGATG 4 cut(s) 671, 718, 802, 1126
BstFNI CGCG 2 cut(s) 390, 651
BstHHI GCGC 1 cut(s) 653
BstKTI GATC 4 cut(s) 118, 319, 723, 892
BstMAI GTCTC 5 cut(s) 50, 432, 689, 932, 1156
BstMBI GATC 4 cut(s) 115, 316, 720, 889
BstMWI GCNNNNNNNGC 2 cut(s) 260, 773
BstNI CCWGG 3 cut(s) 204, 845, 1196
BstSCI CCNGG 3 cut(s) 202, 843, 1194
BstUI CGCG 2 cut(s) 390, 651
BstV1I GCAGC 1 cut(s) 1239
BstX2I RGATCY 2 cut(s) 720, 889
BstYI RGATCY 2 cut(s) 720, 889
Bsu15I ATCGAT 1 cut(s) 138
BsuRI GGCC 5 cut(s) 360, 367, 530, 600, 818
BsuTUI ATCGAT 1 cut(s) 138
BtgI CCRYGG 2 cut(s) 97, 361
BtrI CACGTC 1 cut(s) 82
BtsCI GGATG 4 cut(s) 671, 718, 802, 1126
BtsIMutI CAGTG 3 cut(s) 450, 747, 1213
Cac8I GCNNGC 2 cut(s) 252, 532
CciI TCATGA 2 cut(s) 430, 1412
CfoI GCGC 1 cut(s) 653
Cfr13I GGNCC 3 cut(s) 295, 365, 1234
ClaI ATCGAT 1 cut(s) 138
CseI GACGC 2 cut(s) 172, 229
Csp6I GTAC 5 cut(s) 212, 407, 1031, 1288, 1373
CviAII CATG 6 cut(s) 98, 193, 350, 362, 431, 1413
CviQI GTAC 5 cut(s) 212, 407, 1031, 1288, 1373
DdeI CTNAG 3 cut(s) 1089, 1302, 1323
DpnI GATC 4 cut(s) 117, 318, 722, 891
DpnII GATC 4 cut(s) 115, 316, 720, 889
EaeI YGGCCR 3 cut(s) 358, 528, 598
Eco130I CCWWGG 3 cut(s) 97, 361, 1035
Eco24I GRGCYC 1 cut(s) 293
Eco31I GGTCTC 1 cut(s) 432
Eco47I GGWCC 2 cut(s) 295, 1234
Eco88I CYCGRG 1 cut(s) 771
EcoRII CCWGG 3 cut(s) 202, 843, 1194
EcoT14I CCWWGG 3 cut(s) 97, 361, 1035
EcoT38I GRGCYC 1 cut(s) 293
ErhI CCWWGG 3 cut(s) 97, 361, 1035
FaeI CATG 6 cut(s) 101, 196, 353, 365, 434, 1416
FaqI GGGAC 1 cut(s) 986
FatI CATG 6 cut(s) 97, 192, 349, 361, 430, 1412
FauI CCCGC 1 cut(s) 696
FauNDI CATATG 1 cut(s) 1354
Fnu4HI GCNGC 2 cut(s) 649, 1253
FokI GGATG 4 cut(s) 678, 725, 789, 1133
FriOI GRGCYC 1 cut(s) 293
Fsp4HI GCNGC 2 cut(s) 649, 1253
FspBI CTAG 2 cut(s) 866, 969
GlaI GCGC 1 cut(s) 652
GluI GCNGC 2 cut(s) 649, 1253
GsaI CCCAGC 1 cut(s) 665
GsuI CTGGAG 1 cut(s) 305
HaeIII GGCC 5 cut(s) 360, 367, 530, 600, 818
HgaI GACGC 2 cut(s) 172, 229
HhaI GCGC 1 cut(s) 653
Hin1I GRCGYC 3 cut(s) 63, 183, 240
Hin1II CATG 6 cut(s) 101, 196, 353, 365, 434, 1416
Hin6I GCGC 1 cut(s) 651
HinP1I GCGC 1 cut(s) 651
HincII GTYRAC 1 cut(s) 457
HindII GTYRAC 1 cut(s) 457
HinfI GANTC 3 cut(s) 69, 222, 1153
HphI GGTGA 3 cut(s) 269, 859, 1057
Hpy166II GTNNAC 7 cut(s) 85, 167, 457, 619, 754, 1288, 1375
Hpy188I TCNGA 7 cut(s) 68, 156, 270, 295, 538, 1092, 1324
Hpy8I GTNNAC 7 cut(s) 85, 167, 457, 619, 754, 1288, 1375
Hpy99I CGWCG 3 cut(s) 23, 65, 1404
HpyCH4III ACNGT 6 cut(s) 44, 328, 494, 751, 793, 1208
HpyCH4IV ACGT 5 cut(s) 63, 81, 1137, 1228, 1399
HpyCH4V TGCA 6 cut(s) 338, 349, 545, 593, 1017, 1134
HpyF10VI GCNNNNNNNGC 2 cut(s) 260, 773
HpyF3I CTNAG 3 cut(s) 1089, 1302, 1323
HpySE526I ACGT 5 cut(s) 63, 81, 1137, 1228, 1399
Hsp92I GRCGYC 3 cut(s) 63, 183, 240
Hsp92II CATG 6 cut(s) 101, 196, 353, 365, 434, 1416
HspAI GCGC 1 cut(s) 651
Kzo9I GATC 4 cut(s) 115, 316, 720, 889
LmnI GCTCC 2 cut(s) 949, 1313
Lsp1109I GCAGC 1 cut(s) 1239
LweI GCATC 2 cut(s) 484, 829
MaeI CTAG 2 cut(s) 866, 969
MaeII ACGT 5 cut(s) 63, 81, 1137, 1228, 1399
MaeIII GTNAC 7 cut(s) 184, 374, 641, 668, 1063, 1102, 1244
MalI GATC 4 cut(s) 117, 318, 722, 891
MbiI CCGCTC 2 cut(s) 121, 1070
MboI GATC 4 cut(s) 115, 316, 720, 889
MboII GAAGA 3 cut(s) 389, 460, 965
MflI RGATCY 2 cut(s) 720, 889
MhlI GDGCHC 1 cut(s) 293
MlsI TGGCCA 2 cut(s) 360, 530
MluCI AATT 8 cut(s) 280, 333, 539, 585, 609, 1051, 1217, 1317
MluNI TGGCCA 2 cut(s) 360, 530
MlyI GAGTC 1 cut(s) 1147
MmeI TCCRAC 1 cut(s) 1291
Mox20I TGGCCA 2 cut(s) 360, 530
MroXI GAANNNNTTC 3 cut(s) 264, 416, 1338
MscI TGGCCA 2 cut(s) 360, 530
MseI TTAA 6 cut(s) 468, 504, 513, 689, 977, 1346
MslI CAYNNNNRTG 2 cut(s) 90, 191
Msp20I TGGCCA 2 cut(s) 360, 530
MspR9I CCNGG 3 cut(s) 204, 845, 1196
Mva1269I GAATGC 1 cut(s) 229
MvaI CCWGG 3 cut(s) 204, 845, 1196
MvnI CGCG 2 cut(s) 390, 651
MwoI GCNNNNNNNGC 2 cut(s) 260, 773
NcoI CCATGG 2 cut(s) 97, 361
NdeI CATATG 1 cut(s) 1354
NdeII GATC 4 cut(s) 115, 316, 720, 889
NlaIII CATG 6 cut(s) 101, 196, 353, 365, 434, 1416
NlaIV GGNNCC 2 cut(s) 52, 891
NmuCI GTSAC 6 cut(s) 184, 374, 641, 1063, 1102, 1244
PaeR7I CTCGAG 1 cut(s) 771
PagI TCATGA 2 cut(s) 430, 1412
PctI GAATGC 1 cut(s) 229
PdmI GAANNNNTTC 3 cut(s) 264, 416, 1338
PfeI GAWTC 2 cut(s) 69, 222
PflFI GACNNNGTC 1 cut(s) 1167
PfoI TCCNGGA 1 cut(s) 1194
PkrI GCNGC 2 cut(s) 650, 1254
PleI GAGTC 1 cut(s) 1147
PpsI GAGTC 1 cut(s) 1147
Ppu21I YACGTR 1 cut(s) 1229
PshBI ATTAAT 1 cut(s) 689
Psp6I CCWGG 3 cut(s) 202, 843, 1194
PspFI CCCAGC 1 cut(s) 661
PspGI CCWGG 3 cut(s) 202, 843, 1194
PspN4I GGNNCC 2 cut(s) 52, 891
PspPI GGNCC 3 cut(s) 295, 365, 1234
PspXI VCTCGAGB 1 cut(s) 771
PsrI GAACNNNNNNTAC 2 cut(s) 781, 813
PsuI RGATCY 2 cut(s) 720, 889
PsyI GACNNNGTC 1 cut(s) 1167
RsaI GTAC 5 cut(s) 213, 408, 1032, 1289, 1374
RsaNI GTAC 5 cut(s) 212, 407, 1031, 1288, 1373
RseI CAYNNNNRTG 2 cut(s) 90, 191
SaqAI TTAA 6 cut(s) 468, 504, 513, 689, 977, 1346
SatI GCNGC 2 cut(s) 649, 1253
Sau3AI GATC 4 cut(s) 115, 316, 720, 889
Sau96I GGNCC 3 cut(s) 295, 365, 1234
SchI GAGTC 1 cut(s) 1147
ScrFI CCNGG 3 cut(s) 204, 845, 1196
SduI GDGCHC 1 cut(s) 293
SfaNI GCATC 2 cut(s) 484, 829
Sfr274I CTCGAG 1 cut(s) 771
SinI GGWCC 2 cut(s) 295, 1234
SlaI CTCGAG 1 cut(s) 771
SmiMI CAYNNNNRTG 2 cut(s) 90, 191
SmlI CTYRAG 3 cut(s) 559, 771, 1071
SmoI CTYRAG 3 cut(s) 559, 771, 1071
Sse9I AATT 8 cut(s) 280, 333, 539, 585, 609, 1051, 1217, 1317
SsiI CCGC 6 cut(s) 119, 310, 649, 703, 985, 1068
SspMI CTAG 2 cut(s) 866, 969
StyD4I CCNGG 3 cut(s) 202, 843, 1194
StyI CCWWGG 3 cut(s) 97, 361, 1035
TaaI ACNGT 6 cut(s) 44, 328, 494, 751, 793, 1208
TaiI ACGT 5 cut(s) 66, 84, 1140, 1231, 1402
TaqI TCGA 4 cut(s) 138, 225, 772, 787
TasI AATT 8 cut(s) 280, 333, 539, 585, 609, 1051, 1217, 1317
TatI WGTACW 3 cut(s) 211, 1287, 1372
TauI GCSGC 1 cut(s) 651
TfiI GAWTC 2 cut(s) 69, 222
Tru1I TTAA 6 cut(s) 468, 504, 513, 689, 977, 1346
Tru9I TTAA 6 cut(s) 468, 504, 513, 689, 977, 1346
TscAI CASTG 3 cut(s) 450, 754, 1213
TseFI GTSAC 6 cut(s) 184, 374, 641, 1063, 1102, 1244
TseI GCWGC 1 cut(s) 1252
Tsp45I GTSAC 6 cut(s) 184, 374, 641, 1063, 1102, 1244
TspDTI ATGAA 3 cut(s) 124, 597, 966
TspGWI ACGGA 2 cut(s) 424, 629
TspRI CASTG 3 cut(s) 450, 754, 1213
Tth111I GACNNNGTC 1 cut(s) 1167
VpaK11BI GGWCC 2 cut(s) 295, 1234
VspI ATTAAT 1 cut(s) 689
XapI RAATTY 3 cut(s) 539, 1051, 1217
XbaI TCTAGA 1 cut(s) 865
XcmI CCANNNNNNNNNTGG 3 cut(s) 410, 826, 1042
XhoI CTCGAG 1 cut(s) 771
XmnI GAANNNNTTC 3 cut(s) 264, 416, 1338
XspI CTAG 2 cut(s) 866, 969
ZraI GACGTC 1 cut(s) 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.